BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038401
         (542 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
 gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  978 bits (2528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/534 (86%), Positives = 504/534 (94%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDWINEEA YSPSVFAYNVV+RNVLRAKQWELAHGLF+EMRQR +APDRYTYSTL
Sbjct: 137 RSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTL 196

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEGMFDSA+SWLQ+MEQDRVSGDLVLYSNLIEL+RKL DYSKAISIFSRLK SGI
Sbjct: 197 ITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGI 256

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDLVAYN+MINVFGKAKLF+EARLL+ EMR  GV PDTVSYSTLL++YVEN K+VEALS
Sbjct: 257 SPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALS 316

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VF+EMNEV CPLDLTTCN+MIDVYGQLDMAK+ADRLFWSMRKMGI+P +VSYNTLLRVYG
Sbjct: 317 VFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYG 376

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGKSLEHEKATNL+QEMQNRGIEPNAI
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAI 436

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IW KAGKLDRAAMLFQKLRSSG+EID VLYQTMIVAYER GLVAHAKRLLHEL
Sbjct: 437 TYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHEL 496

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           ++P+ IPRETAITILA AGRIEEATWVFRQAFDAGEVKDI+VFGCMI+LFSRN+K+ NVI
Sbjct: 497 KRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVI 556

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVF+KMR AGYFPDS++IALVLN+ GKLREFE AD +Y EM+EEGCVFSD+VHFQMLSLY
Sbjct: 557 EVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLY 616

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           GAR DF M++SLFERLDSD NINKKELH VVA IYERANRLNDAS+IMNRM +R
Sbjct: 617 GARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMRER 670



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 39/325 (12%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P + +YN +LR    A+ +  A  LF  M+++ I  +  TY+T+I  +G
Sbjct: 352 LFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L+SSGI  D V
Sbjct: 412 KSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQV 471

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y TMI  + +A L   A+ L+ E++    +PD +   T + +     +  EA  VF + 
Sbjct: 472 LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWVFRQA 527

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS------VVSYNTLLR-- 237
            +     D+T    MID++ +     +   +F  MR  G  P       V++    LR  
Sbjct: 528 FDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREF 587

Query: 238 -----VYGEAE----LFGEAIHL-----------FR----LMQRKEIEQNVVT---YNTM 270
                +Y E E    +F + +H            F+    L +R + + N+     +  +
Sbjct: 588 EKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVV 647

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGI 295
             IY ++     A+ +M  M+ RGI
Sbjct: 648 ASIYERANRLNDASQIMNRMRERGI 672


>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
 gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/533 (86%), Positives = 500/533 (93%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDWIN+ ARYSPSVFAYNVVLRNVLRAKQW+ AHGLFDEMR R +APDRYTYSTL
Sbjct: 89  RSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTL 148

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGK GMFD+++ WLQQMEQDRVSGDLVLYSNLIEL+RKL DYSKAISIF RLK SGI
Sbjct: 149 ITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI 208

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PDLVAYN+MINVFGKAKLF+EA+LL++EMRE GV PDTVSYSTLL++YVEN KFVEALS
Sbjct: 209 MPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALS 268

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VFAEMNE  CPLDLTTCN+MIDVYGQLDMAK+ADRLFWSMRKMGI+P+VVSYNTLLRVYG
Sbjct: 269 VFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG 328

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E ELFGEAIHLFRLMQ+K+IEQNVVTYNTMIK+YGKSLEHEKATNLMQEMQNRGIEPNAI
Sbjct: 329 ETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAI 388

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDRAAMLFQKLRSSGVEID VLYQTMIVAYER GLVAHAKRLLHEL
Sbjct: 389 TYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHEL 448

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           + P++IPRETAI ILARAGRIEEATWVFRQAFDAGEVKDISVFGCM++LFSRN+K ANVI
Sbjct: 449 KHPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVI 508

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR AGYFPDS++IALVLN+YGKL EFE AD LY EMQEE CVF D+VHFQMLSLY
Sbjct: 509 EVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLY 568

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           GARKDF M+E+LFERLDSD NINKKELH VVA IYER NRLNDASRIMNRM+K
Sbjct: 569 GARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRLNDASRIMNRMSK 621



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 132/277 (47%), Gaps = 6/277 (2%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +V  YN +++   ++ + + A  L  EM+NR + P+  TYST+I  +GKAG  D +    
Sbjct: 106 SVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWL 165

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           Q++    V  D VLY  +I    ++   + A  +   L++    P+ +   + I +  +A
Sbjct: 166 QQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKA 225

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
               EA  + ++  + G + D   +  ++ ++  N+K+   + VF +M  A    D    
Sbjct: 226 KLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTC 285

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            ++++ YG+L   + AD L+  M++ G   +   +  +L +YG  + F     LF RL  
Sbjct: 286 NVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLF-RLMQ 344

Query: 499 DSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNKR 534
             +I +  + ++ +  +Y ++     A+ +M  M  R
Sbjct: 345 KKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNR 381


>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 654

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/533 (86%), Positives = 495/533 (92%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDWINE ARYSPSVFAYNVVLRNVLRAK+W+LAHGLFDEMRQR ++PDRYTYSTL
Sbjct: 116 RSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTL 175

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGK GMFD ++ WLQQMEQDRVSGDLVLYSNLIEL+RKL DYSKAISIF RLK SGI
Sbjct: 176 ITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI 235

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDLVAYN+MINVFGKA+LF+EAR+L+ EMRE GV PDTVSYSTLL++YVEN KFVEALS
Sbjct: 236 TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALS 295

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VFAEMNE NC LDL TCNIMIDVYGQLDM K+ADRLFWSMRKMGI+P+VVSYNTLL+VYG
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYG 355

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL+QEMQ RGIEPNAI
Sbjct: 356 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAI 415

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDRAAMLFQKLRSSGVEID VLYQTMIVAYER GLVAHAKRLLH+L
Sbjct: 416 TYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDL 475

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           + P+ IPR+TAI ILARAGRIEEATWVFRQAFDAGEVKDISVF CMIELFSRNK+ ANV+
Sbjct: 476 KCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVV 535

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR AGYFPDS +IALVLN+YGKLREFE AD +Y EMQEE CVF D+VHFQMLSLY
Sbjct: 536 EVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLY 595

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           GARKDF M+ESLFE+LDSD NINKKELH VVA IYER NRLNDASRIMNRM+K
Sbjct: 596 GARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSK 648


>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
 gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 678

 Score =  951 bits (2459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/534 (82%), Positives = 502/534 (94%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDW++EEA+Y+PSVFAYNVVLRNVLRAKQ+++AHGLFDEMRQR +APDRYTYSTL
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEGMFDSA+SWLQ+MEQDRVSGDLVLYSNLIEL+R+L DYSKAISIFSRLK SGI
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDLVAYN+MINV+GKAKLF+EARLLI+EM E GV P+TVSYSTLL++YVENHKF+EALS
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VFAEM EVNC LDLTTCNIMIDVYGQLDM K+ADRLFWS+RKM I+P+VVSYNT+LRVYG
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKATNL+QEMQ+RGIEPNAI
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDRAA LFQKLRSSGVEID VLYQTMIVAYERVGL+ HAKRLLHEL
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           + P+ IPRETAITILA+AGR EEATWVFRQAF++GEVKDISVFGCMI L+SRN++Y NVI
Sbjct: 497 KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 556

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR+AGYFPDS++IA+VLN+YGK REFE AD +Y EMQEEGCVF D+VHFQMLSLY
Sbjct: 557 EVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 616

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            ++KDF M+ESLF+RL+SD N+N KELH VVA +YERA++LNDASR+MNRM +R
Sbjct: 617 SSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 670



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F++MR  G  PD    + ++  +GK+  F+ A +  ++M+++       ++  ++ L  
Sbjct: 558 VFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYS 617

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV-KP 157
              D+    S+F RL+S   V     +  +  ++ +A    +A  ++  MRE+G+ KP
Sbjct: 618 SKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675


>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 680

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/534 (82%), Positives = 500/534 (93%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDW++EEA+Y+PSVFAYNVVLRNVLRAKQ+ +AHGLFDEMRQR +APDRYTYSTL
Sbjct: 139 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTL 198

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEGMFDSA+SWLQ+MEQDRVSGDLVLYSNLIEL+R+L DYSKAISIFSRLK SGI
Sbjct: 199 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 258

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDLVAYN+MINV+GKAKLFKEAR+LI+EM E GV P+TVSYSTLL++YVENHKF+EALS
Sbjct: 259 TPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALS 318

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VFAEM EVNCPLDLTTCNIMIDVYGQLDM K+ADRLFWS+RKM I+P+VVSYNT+LRVYG
Sbjct: 319 VFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 378

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKATNL+QEMQ+RGIEPNAI
Sbjct: 379 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 438

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDRAA LFQKLRSSGVEID VLYQTMIVAYERVGL+ HAKRLLHEL
Sbjct: 439 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 498

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           + P+ IPRETAITILA+AG  EEATWVFRQAF++GEVKDISVFGCMI L+SRN++Y NVI
Sbjct: 499 KLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 558

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR+AGYFPDS+ IA+VLN+YGK REFE AD +Y EMQEEGCVF D+VHFQMLSLY
Sbjct: 559 EVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 618

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            ++KDF M+ESLFERL+SD N+N KELH VVA +YERA++LNDASR+MNRM +R
Sbjct: 619 SSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 672



 Score = 42.4 bits (98), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F++MR  G  PD    + ++  +GK+  F+ A +  ++M+++       ++  ++ L  
Sbjct: 560 VFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYS 619

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV-KP 157
              D+    S+F RL+S   V     +  +  ++ +A    +A  ++  MRE+G+ KP
Sbjct: 620 SKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 677


>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
 gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/533 (84%), Positives = 494/533 (92%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+AILDWINEEA Y+PSV+AYNVVLRNVLRAKQWELAHGLFDEMRQR +A DRYTYSTL
Sbjct: 141 RSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTL 200

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEGMFD+A+SWLQ+MEQDRVSGDLVLYSNLIEL+RKL DYSKAISIFSRLK SGI
Sbjct: 201 ITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGI 260

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+VAYNTMINVFGKAKLF+EAR L++EMR   V PDTVSYSTLLN++VEN KF+EALS
Sbjct: 261 TPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALS 320

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V +EM EVNCPLDLTTCNIMIDVYGQLDM K+ADRLFW MRK+GI+P+VVSYNT+LRVYG
Sbjct: 321 VISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYG 380

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEHEKATNL+Q+MQ RGIEPNAI
Sbjct: 381 EAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAI 440

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDR+AMLFQKLRSSG EID VLYQTMIVAYE+ GLV HAKRLLHEL
Sbjct: 441 TYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHEL 500

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           +QP+ IPR TAITILA+AGRIEEATWVFRQAFDAGE+KDISVF CMI+LFSRNKK+ NV+
Sbjct: 501 KQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVL 560

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR+ G+FP+S +IALVLN+YGKLR+F+TAD LY EMQEEGCVF+D+VHFQMLSLY
Sbjct: 561 EVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLY 620

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           GAR D+  LESLFERLDSD NINKKELH VVA IYER NR  DASRI+NRMNK
Sbjct: 621 GARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRIINRMNK 673



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 31/308 (10%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PSV +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +GK    + A + 
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
           +Q+M+   +  + + YS +I +  K     +A  +F +L+ SG+  D V Y TMI  + +
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             L   A+ LL E+R  + +P                               D   +  +
Sbjct: 277 AKLFREARFLLKEMRAVDVMP-------------------------------DTVSYSTL 305

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + +F  N+K+   + V  +M+      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 306 LNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGI 365

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  +L +YG  + F     LF  +           ++ +  IY +      A+ 
Sbjct: 366 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATN 425

Query: 527 IMNRMNKR 534
           ++  M KR
Sbjct: 426 LVQDMQKR 433


>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/534 (82%), Positives = 502/534 (94%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+LDW++EEA+Y+PSVFAYNVVLRNVLRAKQ+++AHGLFDEMRQR +APDRYTYSTL
Sbjct: 5   RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 64

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEGMFDSA+SWLQ+MEQDRVSGDLVLYSNLIEL+R+L DYSKAISIFSRLK SGI
Sbjct: 65  ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 124

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDLVAYN+MINV+GKAKLF+EARLLI+EM E GV P+TVSYSTLL++YVENHKF+EALS
Sbjct: 125 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 184

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VFAEM EVNC LDLTTCNIMIDVYGQLDM K+ADRLFWS+RKM I+P+VVSYNT+LRVYG
Sbjct: 185 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 244

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKATNL+QEMQ+RGIEPNAI
Sbjct: 245 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 304

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGKAGKLDRAA LFQKLRSSGVEID VLYQTMIVAYERVGL+ HAKRLLHEL
Sbjct: 305 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 364

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           + P+ IPRETAITILA+AGR EEATWVFRQAF++GEVKDISVFGCMI L+SRN++Y NVI
Sbjct: 365 KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 424

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR+AGYFPDS++IA+VLN+YGK REFE AD +Y EMQEEGCVF D+VHFQMLSLY
Sbjct: 425 EVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 484

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            ++KDF M+ESLF+RL+SD N+N KELH VVA +YERA++LNDASR+MNRM +R
Sbjct: 485 SSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 538



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F++MR  G  PD    + ++  +GK+  F+ A +  ++M+++       ++  ++ L  
Sbjct: 426 VFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYS 485

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV-KP 157
              D+    S+F RL+S   V     +  +  ++ +A    +A  ++  MRE+G+ KP
Sbjct: 486 SKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 543


>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/534 (82%), Positives = 493/534 (92%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+LDWIN++A Y PS+FAYNV+LRNVLRAKQW LAHGLFDEMRQ+G++PDRYTYSTL
Sbjct: 126 RALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTL 185

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ITCFGK G+FDS++ WLQQMEQD VSGDLVLYSNLI+LARKLSDYSKAISIFSRLK+S I
Sbjct: 186 ITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI 245

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL+AYN+MINVFGKAKLF+EARLL++EMR+  V+PDTVSYSTLL +YV+N KFVEALS
Sbjct: 246 TPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 305

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F+EMNE  CPLDLTTCNIMIDVYGQL M K+ADRLFWSMRKMGI P+V+SYNTLLRVYG
Sbjct: 306 LFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYG 365

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EA+LFGEAIHLFRLMQ K+++QNVVTYNTMI IYGK+LEHEKATNL+QEM  RGIEPNAI
Sbjct: 366 EADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAI 425

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IW KAGKLDRAA+LFQKLRSSGV ID VLYQTMIVAYER GLVAHAKRLLHEL
Sbjct: 426 TYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHEL 485

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           ++P+ IPR+TAI ILARAGRIEEATWVFRQAFDA EVKDISVFGCMI LFS+NKKYANV+
Sbjct: 486 KRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVV 545

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR  GYFPDS +IALVLN++GKLREF+ AD LY +M EEGCVF D+VHFQMLSLY
Sbjct: 546 EVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY 605

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           GARKDF M+ESLFE+LDS+ NINKKELH VVA IYERA+RLNDASRIMNRMNK+
Sbjct: 606 GARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNKK 659


>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/534 (82%), Positives = 492/534 (92%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+LDWIN++A YSPS+FAYNV+LRNVLRAKQW LAHGLFDEMRQ+G++PDRYTYSTL
Sbjct: 117 RALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTL 176

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGK G+FDS++ WLQQMEQD VSGDLVLYSNLI+LARKLSDYSKAISIFSRLK+S I
Sbjct: 177 ITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI 236

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL+AYN+MINVFGKAKLF+EARLL++EMR+  V+PDTVSYSTLL +YV+N KFVEALS
Sbjct: 237 SPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 296

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EMNE  CPLDLTTCNIMIDVYGQL M K+ADRLFWSMRKMGI P+VVSYNTLLRVYG
Sbjct: 297 LFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYG 356

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EA+LFGEAIHLFRLMQ K+++QNVVTYNTMI IYGK+LEHEKATNL+QEM+ RGIEPNAI
Sbjct: 357 EADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAI 416

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IW KAGKLDRAA+LFQKLRSSGV ID VLYQTMIVAYER GLVAHAKRLLHEL
Sbjct: 417 TYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHEL 476

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           ++P+ IPR+TAI ILARAGRIEEATWVFRQAFDA EVKDISVFGCMI LFS+NKKY NV+
Sbjct: 477 KRPDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVV 536

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EVFEKMR  GYFPDS +IALVLN++GKLREF+ AD LY +M EEGCVF D+VHFQMLSLY
Sbjct: 537 EVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY 596

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           GARKDF M+ESLFE+LDS+ NINKKELH VVA IYERA+RLNDASRIMNRMN++
Sbjct: 597 GARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNQK 650


>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/535 (76%), Positives = 479/535 (89%), Gaps = 1/535 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+AILDW+NE A+YSPS+  YNVV+RNVLRAKQW+LAHGLFDEM Q+G++PD+YTYSTL
Sbjct: 142 RSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFDEMLQKGLSPDKYTYSTL 201

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG- 119
           IT F K+G+FDS+  WLQQME+D VSGDLVLYSNLIEL+RKL DYSKAISIF+ LK SG 
Sbjct: 202 ITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKAISIFNALKGSGN 261

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           IVPDL+A N MI+V+GKAKLF+EARLL++EMR+ GV P T SYSTLL +YV+N KFVEA+
Sbjct: 262 IVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAV 321

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           S+F+EMNEV CP+DLTTCNIMIDVYGQL M K+AD  FW MRKMGI+P+VVSYNT+LRVY
Sbjct: 322 SLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVY 381

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           GEA LFGEA+HLF LMQ K + QNVVTYNTMI IYGKSLEH+KATNL+QEMQ+RGI+PNA
Sbjct: 382 GEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNA 441

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ITYSTII+IW KAGKLDRAAMLF KLR+SGV+ID +LYQTMIVAY++ GLVAHAKRLL+E
Sbjct: 442 ITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNE 501

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           L+QP+ + RETAITILARAG+++EA WVFRQAFDAGEVKDISVFGC+I++FSR +KYA+V
Sbjct: 502 LKQPDNVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHV 561

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           +EVFEKMR  G+FPDS++IALVLN++GKLR+FE AD LY +M EEGCVF D+VHFQML L
Sbjct: 562 VEVFEKMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEGCVFPDEVHFQMLGL 621

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           YGAR DFNM+ESLFE+LDS  NINKKELH VVA IYERA+R NDASRIMNRMN +
Sbjct: 622 YGARMDFNMVESLFEKLDSHPNINKKELHFVVANIYERADRFNDASRIMNRMNHK 676


>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           turbinata]
          Length = 441

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/441 (80%), Positives = 399/441 (90%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           HGLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL
Sbjct: 1   HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIEL 60

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+
Sbjct: 61  SRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW
Sbjct: 121 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+L
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           EHEKA NL+QEMQ+RG+EPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+Q
Sbjct: 241 EHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQ 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           TMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVK
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK 360

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           DI+VF  MI L S+ KKY+NVIEVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y
Sbjct: 361 DITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVY 420

Query: 459 SEMQEEGCVFSDQVHFQMLSL 479
            EMQE GCVFSDQVHFQMLSL
Sbjct: 421 MEMQEVGCVFSDQVHFQMLSL 441



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 177/370 (47%), Gaps = 40/370 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P + AYN ++    +AK +  A  L  EM+  G+ P+  +YSTL+T + +   F  A+
Sbjct: 82  FXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 141

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 142 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 201

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G A+LF EA  L   M+ + ++ + V+Y                                
Sbjct: 202 GDAELFGEAIHLFRLMQRKNIEQNVVTY-------------------------------- 229

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N M+ +YG+    + A+ L   M+  G++P+ ++Y+T++ ++G+      A  LF+ 
Sbjct: 230 ---NSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQK 286

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++   +E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+
Sbjct: 287 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGR 342

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  +F++   +G   D  +++ MI    +    ++   +  ++R     P    I I
Sbjct: 343 IEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAI 402

Query: 375 LARA-GRIEE 383
           +  A G+++E
Sbjct: 403 VLNAYGKLQE 412



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 175/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDL----------- 51

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++      ++V
Sbjct: 52  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKXSGFXPDLV 87

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 88  AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 147

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 148 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 207

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 208 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTI 267

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    
Sbjct: 268 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 326

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 327 NIPRDTAIHILAG----AGRIEEATYV 349



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 150/322 (46%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 63  KLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 242

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 243 EKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 302

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKR 324



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 178 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 237

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   V  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 238 KTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 353

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 354 IDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 413

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 414 DKANDVYMEMQ 424



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 2   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 61

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L+     P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 62  RKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 182 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 241 EHEKANNLIQEMQSR 255


>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           rubella]
          Length = 440

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/440 (80%), Positives = 398/440 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+PSVVS+NTLLRVYG+AELFGEAIHLFRLMQRK IEQ VVTYN+MI IYGK+LE
Sbjct: 181 MRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y 
Sbjct: 361 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYM 420

Query: 460 EMQEEGCVFSDQVHFQMLSL 479
           EMQE GCVFSD+VHFQMLSL
Sbjct: 421 EMQEVGCVFSDEVHFQMLSL 440



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 146/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     +    +EA  +F   
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G    +  F  ++ ++   + +   I +F  M+             ++  YGK  E 
Sbjct: 182 RKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   S      +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQTVVTYNSMIMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           rotundifolia]
          Length = 440

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/440 (79%), Positives = 399/440 (90%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           HGLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL
Sbjct: 1   HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIEL 60

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+
Sbjct: 61  SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW
Sbjct: 121 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+L
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           EHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+Q
Sbjct: 241 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQ 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           TMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVK
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK 360

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           +I+VF  MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y
Sbjct: 361 NIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 420

Query: 459 SEMQEEGCVFSDQVHFQMLS 478
            EMQE GCVFSD+VHFQMLS
Sbjct: 421 MEMQEVGCVFSDEVHFQMLS 440



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 176/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDL----------- 51

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 52  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 87

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 88  AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 147

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 148 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 207

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 208 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTI 267

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    
Sbjct: 268 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 326

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 327 NIPRDTAIHILAG----AGRIEEATYV 349



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 150/322 (46%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 63  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 242

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 243 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 302

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKR 324



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 178 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 237

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 238 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 353

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     ++     MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 354 IDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 413

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 414 DKANDVYMEMQ 424



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 2   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 61

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 62  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 182 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 241 EHEKANNLIQEMQSR 255


>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           microcephala]
          Length = 440

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/440 (79%), Positives = 398/440 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y 
Sbjct: 361 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYM 420

Query: 460 EMQEEGCVFSDQVHFQMLSL 479
           EMQE GCVFSD+VHFQMLSL
Sbjct: 421 EMQEVGCVFSDEVHFQMLSL 440



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 176/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL----------- 50

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 51  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 86

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 87  AYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEM 146

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 206

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 207 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTI 266

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G +  DQ+ FQ M+  Y         + L   L    
Sbjct: 267 ISIWGKVGKLDRAAMLFQKLRSSG-IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 325

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 326 NIPRDTAIHILAG----AGRIEEATYV 348



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 149/322 (46%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTA 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           trifolia]
          Length = 440

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/440 (79%), Positives = 395/440 (89%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RK  DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG EID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA VLN+YGKL+EF+ A+D+Y 
Sbjct: 361 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYM 420

Query: 460 EMQEEGCVFSDQVHFQMLSL 479
           EMQE GCVFSD+VHFQMLSL
Sbjct: 421 EMQEVGCVFSDEVHFQMLSL 440



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 148/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++ +GV  +  
Sbjct: 62  KXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTA 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            +    + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           macrostachya]
          Length = 437

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/437 (80%), Positives = 391/437 (89%)

Query: 43  DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           DEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL
Sbjct: 1   DEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SY
Sbjct: 61  CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           STLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MGI+P+VVSYNTLLRVYG+AELFGEAIHLF LMQRK I QNVVTYN+M+ IYGK+LEHEK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 240

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIV
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           AYER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI V
Sbjct: 301 AYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDIMV 360

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQ
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 420

Query: 463 EEGCVFSDQVHFQMLSL 479
           E GCVFSD+VHFQMLSL
Sbjct: 421 EVGCVFSDEVHFQMLSL 437



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 147/316 (46%), Gaps = 4/316 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  +
Sbjct: 3   MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 62

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T
Sbjct: 63  YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYST 122

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G
Sbjct: 123 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 182

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKAN 242

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   Y
Sbjct: 243 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 302

Query: 516 ERANRLNDASRIMNRM 531
           ERA  +  A R+++ +
Sbjct: 303 ERAGLVAHAKRLLHEL 318



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 2   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 62  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 121

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G   +   +  +L +YG  + F     LF  +   + +     ++ +  IY +      A
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKA 241

Query: 525 SRIMNRMNKR 534
           + ++  M  R
Sbjct: 242 NNLIQEMQNR 251


>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 426

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/426 (82%), Positives = 389/426 (91%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI PDLVAYN+MINVFGKAKLFKEAR LI EMR  GV PDTVSYST+
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTI 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVENHKF+EALSVF EM E+NC LDLTTCNIMIDVYGQLDMAK+ADRLFWSMRKMGI
Sbjct: 121 LTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ +KY NV EVFEKMR  GYFPDS++IALVLN+YGKL EF+ A+++Y EMQ+EG
Sbjct: 361 MIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQDEG 420

Query: 466 CVFSDQ 471
           CVF D+
Sbjct: 421 CVFPDE 426



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 152/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R +GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTI 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+ N +   T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +   + I +  +A   +EA  +  +   AG + D   +  +
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTI 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  N K+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           citrodora]
          Length = 435

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/435 (80%), Positives = 390/435 (89%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           HGLFDEMR+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL
Sbjct: 1   HGLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIEL 60

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+
Sbjct: 61  SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPN 120

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW
Sbjct: 121 TASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MRKMGI+ +VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+L
Sbjct: 181 GMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           EHEKA NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQ
Sbjct: 241 EHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQ 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           TMIVAYER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVK
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK 360

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           DI+VF  MI LFS+ KKYAN +EVF+KMR  GYFPDS++IALVLN+YGKL E + A+D+Y
Sbjct: 361 DITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVY 420

Query: 459 SEMQEEGCVFSDQVH 473
            EMQE GCVFSD+VH
Sbjct: 421 MEMQEVGCVFSDEVH 435



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 149/320 (46%), Gaps = 4/320 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 3   LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 63  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 122

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 123 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 183 RKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 242

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302

Query: 512 AGIYERANRLNDASRIMNRM 531
              YERA  +  A R+++ +
Sbjct: 303 IVAYERAGLVAHAKRLLHEL 322



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 2   GLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 61

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 62  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNT 121

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 122 ASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 182 MRKMGIETNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 240

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 241 EHEKANNLIQEMQNR 255


>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           herrerae]
          Length = 433

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/433 (80%), Positives = 391/433 (90%)

Query: 43  DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           DEMR+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL
Sbjct: 1   DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            DYSKAISIFSRLK SG +PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SY
Sbjct: 61  CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 120

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           STLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK
Sbjct: 121 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIV
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           AYER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+V
Sbjct: 301 AYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITV 360

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL E + A+D+Y EMQ
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQ 420

Query: 463 EEGCVFSDQVHFQ 475
           E GC+FSD+VHFQ
Sbjct: 421 EVGCIFSDEVHFQ 433



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 147/316 (46%), Gaps = 4/316 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  +
Sbjct: 3   MRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 62

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T
Sbjct: 63  YSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYST 122

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G
Sbjct: 123 LLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 182

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 242

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   Y
Sbjct: 243 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 302

Query: 516 ERANRLNDASRIMNRM 531
           ERA  +  A R+++ +
Sbjct: 303 ERAGLVAHAKRLLHEL 318



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 6/251 (2%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 2   EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 62  DYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYS 121

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 122 TLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLND 523
           G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 524 ASRIMNRMNKR 534
           A+ ++  M  R
Sbjct: 241 ANNLIQEMQNR 251


>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           filifolia]
          Length = 439

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/439 (79%), Positives = 396/439 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMR+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KK +NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y 
Sbjct: 361 ITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYM 420

Query: 460 EMQEEGCVFSDQVHFQMLS 478
           EMQE GCVFSD+VHFQMLS
Sbjct: 421 EMQEVGCVFSDEVHFQMLS 439



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 178/370 (48%), Gaps = 40/370 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P + AYN ++    +AK +  A  L  EM+  G+ P+  +YSTL+T + +   F  A+
Sbjct: 81  FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 140

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G A+LF EA  L   M+ + ++ + V+Y                                
Sbjct: 201 GDAELFGEAIHLFRLMQRKNIEQNVVTY-------------------------------- 228

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N M+ +YG+    + A+ L   M+  GI+P+ ++Y+T++ ++G+      A  LF+ 
Sbjct: 229 ---NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 285

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++   +E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+
Sbjct: 286 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGR 341

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  +F++   +G   D  +++ MI    +    ++   +  ++R     P    I I
Sbjct: 342 IEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAI 401

Query: 375 LARA-GRIEE 383
           +  A G+++E
Sbjct: 402 VLNAYGKLQE 411



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 175/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR + + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 2   LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDL----------- 50

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 51  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 86

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 87  AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 146

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 206

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 207 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTI 266

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    
Sbjct: 267 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 325

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 326 NIPRDTAIHILAG----AGRIEEATYV 348



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 150/322 (46%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  
Sbjct: 2   LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 177 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 236

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 237 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 352

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 412

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 413 DKANDVYMEMQ 423



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 426

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/426 (81%), Positives = 391/426 (91%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK +GI PDLVAYN+MINVFGKAKLF+EAR LI EMRE GV PDTVSYSTL
Sbjct: 61  SKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C +DLTTCNIMIDVYGQLDMAK+AD+LFWSMRK+GI
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEM NRGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ KKY NV+EVFEKMR  GYFPDS++I+LVLN+YGKL EF+ A+D+Y +MQ+EG
Sbjct: 361 MIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYMDMQDEG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 169/379 (44%), Gaps = 43/379 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F +ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ P+ ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++ +   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M + G  P++   + +++ +G
Sbjct: 206 LFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K+ + + A  L+ +++  G      ++  M+  Y         + L   L    NI +  
Sbjct: 266 KVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 325

Query: 507 LHHVVAGIYERANRLNDAS 525
             H++AG    A R+ +A+
Sbjct: 326 AIHILAG----AGRIEEAT 340



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 149/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R +GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM   G   +   +  ++S++G     +    LF++L S        L+  +   YE
Sbjct: 241 LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317


>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 426

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/426 (82%), Positives = 390/426 (91%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+RG++P RYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGIVPDLVAYN+MINVFGKAKLF+EAR LI EMR  GV PDTVSYSTL
Sbjct: 61  SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFWSMRKMGI
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEM +RGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           M++LFS+ KKY NV+EVFEKMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQ+EG
Sbjct: 361 MVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYLEMQDEG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 169/379 (44%), Gaps = 43/379 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+G+ P   +YSTL+  + +   F +ALS   +M +   P DL                
Sbjct: 1   RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ P+ ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++ +   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M S G  P++   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K+ + + A  L+ +++  G      ++  M+  Y         + L   L    NI +  
Sbjct: 266 KVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 325

Query: 507 LHHVVAGIYERANRLNDAS 525
             H++AG    A R+ +A+
Sbjct: 326 AIHILAG----AGRIEEAT 340



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 149/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+ G+ P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R  GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM   G   +   +  ++S++G     +    LF++L S        L+  +   YE
Sbjct: 241 LIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + RG+ P   TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDY 60

Query: 351 AHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++   +P   A    I +  +A    EA  +  +    G V D   +  +
Sbjct: 61  SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  N+K+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M+ R
Sbjct: 240 NLIQEMHSR 248


>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
           [Coelocarpum swinglei]
          Length = 440

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/440 (79%), Positives = 395/440 (89%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMR++ ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF++AR LI EMR  GV P+ 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNA 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYS LL +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 SSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR+SGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MI AYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIXAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI LFS+ KKYANV+EVF+KM   GYFPDS++IALVLN+YGKL EF+ A+++Y 
Sbjct: 361 ITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEFDKANEVYM 420

Query: 460 EMQEEGCVFSDQVHFQMLSL 479
           EMQ+ GCVFSD+VHFQMLSL
Sbjct: 421 EMQDVGCVFSDEVHFQMLSL 440



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 148/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +  
Sbjct: 62  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNAS 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y  ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 122 SYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L +      + L   +
Sbjct: 242 EKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IXAYERAGLVAHAKRLLHELKR 323



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ + + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    +A  +  +   AG + + 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNA 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           S +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 SSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQNR 254


>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 426

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/426 (81%), Positives = 389/426 (91%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK +GI PDLVAYN+MINVFGKAKLF+EAR LI EMRE GV PDTVSYSTL
Sbjct: 61  SKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFWSMRK+GI
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEM NRGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ KKY NV+EVFEKMR  GYF DS++I+LVLN+YGKL EF+ A+D+Y  MQ+EG
Sbjct: 361 MIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMYMGMQDEG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 170/379 (44%), Gaps = 43/379 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F +ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R  I+ ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ P+ ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++ +   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M + G  P++   + +++ +G
Sbjct: 206 LFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K+ + + A  L+ +++  G      ++  M+  Y         + L   L    NI +  
Sbjct: 266 KVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 325

Query: 507 LHHVVAGIYERANRLNDAS 525
             H++AG    A R+ +A+
Sbjct: 326 AIHILAG----AGRIEEAT 340



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 150/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI+P+ + Y+++I ++GKA     A  L  ++R +GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM   G   +   +  ++S++G     +    LF++L S        L+  +   YE
Sbjct: 241 LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317


>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           micromera]
          Length = 434

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/434 (79%), Positives = 391/434 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RK  DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +Y EN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 TSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KKY+NVIEVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y 
Sbjct: 361 ITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYM 420

Query: 460 EMQEEGCVFSDQVH 473
           EMQE GCVFSD+VH
Sbjct: 421 EMQEVGCVFSDEVH 434



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 178/370 (48%), Gaps = 40/370 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P + AYN ++    +AK +  A  L  EM+  G+ P+  +YSTL+T + +   F  A+
Sbjct: 81  FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEAL 140

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 141 SVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G A+LF EA  L   M+ + ++ + V+Y                                
Sbjct: 201 GDAELFGEAIHLFRLMQRKNIEQNVVTY-------------------------------- 228

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N MI +YG+    + A+ L   M+  GI+P+ ++Y+T++ ++G+      A  LF+ 
Sbjct: 229 ---NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQK 285

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++   +E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+
Sbjct: 286 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGR 341

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  +F++   +G   D  +++ MI    +    ++   +  ++R     P    I +
Sbjct: 342 IEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAV 401

Query: 375 LARA-GRIEE 383
           +  A G+++E
Sbjct: 402 VLNAYGKLQE 411



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 149/322 (46%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+       T   I+     + G  +EA  +F   
Sbjct: 122 SYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 177 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 236

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L+SSG+  D +
Sbjct: 237 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQI 296

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 352

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 412

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 413 DKANDVYMEMQ 423



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            +    + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 TSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMIMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
           [Xeroaloysia ovatifolia]
          Length = 431

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/431 (80%), Positives = 388/431 (90%)

Query: 43  DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           DEMR+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL
Sbjct: 1   DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SY
Sbjct: 61  CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           +TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK
Sbjct: 121 TTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I QNVVTYN+M+ IYGK+LEHEK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 240

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL+QEMQNRGIEPN+ITYSTII+IWGKAGKLDRAAMLFQKLRSSGVEID VLYQTMIV
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           AYE+ GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEV+DI+V
Sbjct: 301 AYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITV 360

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQ
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 420

Query: 463 EEGCVFSDQVH 473
           E GCVFSD+VH
Sbjct: 421 EVGCVFSDEVH 431



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 176/385 (45%), Gaps = 45/385 (11%)

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           +EMRE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL             
Sbjct: 1   DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL------------- 47

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                                 V Y+ L+ +  +   + +AI +F  ++R     ++V Y
Sbjct: 48  ----------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAY 85

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N MI ++GK+    +A +L+ EM+  G+ PN  +Y+T++ ++ +  K   A  +F ++R 
Sbjct: 86  NAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMRE 145

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
               +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    E
Sbjct: 146 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 205

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +FR       V+++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++
Sbjct: 206 AIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 265

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNI 502
            +GK  + + A  L+ +++  G V  DQV +Q M+  Y         + L   L S  NI
Sbjct: 266 IWGKAGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNI 324

Query: 503 NKKELHHVVAGIYERANRLNDASRI 527
            +    H++AG    A R+ +A+ +
Sbjct: 325 PRDTAIHILAG----AGRIEEATYV 345



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 147/316 (46%), Gaps = 4/316 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  +
Sbjct: 3   MRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 62

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T
Sbjct: 63  YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTT 122

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G
Sbjct: 123 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 182

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKAN 242

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   Y
Sbjct: 243 NLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 302

Query: 516 ERANRLNDASRIMNRM 531
           E+A  +  A R+++ +
Sbjct: 303 EKAGLVAHAKRLLHEL 318



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 2   EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 62  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYT 121

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G   +   +  +L +YG  + F     LF  +   + +     ++ +  IY +      A
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKA 241

Query: 525 SRIMNRMNKR 534
           + ++  M  R
Sbjct: 242 NNLIQEMQNR 251


>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           lycioides]
          Length = 429

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/429 (80%), Positives = 385/429 (89%)

Query: 44  EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
           EMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL 
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYS
Sbjct: 61  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 120

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I QNVVTYN+M+ IYGK+LEHEKA
Sbjct: 181 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKA 240

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVA
Sbjct: 241 NNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 300

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 301 YERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 360

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQE
Sbjct: 361 ERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQE 420

Query: 464 EGCVFSDQV 472
            GCVFSD+V
Sbjct: 421 VGCVFSDEV 429



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 176/384 (45%), Gaps = 45/384 (11%)

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL              
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL-------------- 46

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
                                V Y+ L+ +  +   + +AI +F  ++R     ++V YN
Sbjct: 47  ---------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 85

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R  
Sbjct: 86  AMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREI 145

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
              +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA
Sbjct: 146 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 205

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +FR       V+++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ 
Sbjct: 206 IHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 265

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNIN 503
           +GK+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L S  NI 
Sbjct: 266 WGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIP 324

Query: 504 KKELHHVVAGIYERANRLNDASRI 527
           +    H++AG    A R+ +A+ +
Sbjct: 325 RDTAIHILAG----AGRIEEATYV 344



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 147/316 (46%), Gaps = 4/316 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  +
Sbjct: 2   MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 61

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T
Sbjct: 62  YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYST 121

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G
Sbjct: 122 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 181

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 182 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKAN 241

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   Y
Sbjct: 242 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 301

Query: 516 ERANRLNDASRIMNRM 531
           ERA  +  A R+++ +
Sbjct: 302 ERAGLVAHAKRLLHEL 317



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 4/250 (1%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 61  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 120

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G   +   +  +L +YG  + F     LF  +   + +     ++ +  IY +      A
Sbjct: 181 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKA 240

Query: 525 SRIMNRMNKR 534
           + ++  M  R
Sbjct: 241 NNLIQEMQNR 250


>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 426

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/426 (80%), Positives = 385/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PD+YTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL D+
Sbjct: 1   RGRALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDF 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI PDLVAYN+MINVFGKAKLF+EAR LI EMR  G+ PDTVSYSTL
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C L+L TCN+MIDVYGQLDMAK+AD+LFW MRK GI
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEM NRGIEP+AITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +LYQTMIVAYE
Sbjct: 241 LIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY+NV+EVFEKMR  GYFPDS++IALVLN+YGKLREFE A+D Y+EMQ+EG
Sbjct: 361 MINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKANDAYTEMQDEG 420

Query: 466 CVFSDQ 471
           C FSD+
Sbjct: 421 CXFSDE 426



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 173/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R + + PD  +YSTL+  + +   F +ALS   +M +   P DL                
Sbjct: 1   RGRALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   F +AI +F  ++R  I  ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  GI P+ ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            ++ +    MI  Y ++ +   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M + G  PD+   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQ+ +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-VEIDQILYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++AG    A R+ +A+
Sbjct: 325 TAIHILAG----AGRIEEAT 340



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 145/317 (45%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R   + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  + 
Sbjct: 1   RGRALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDF 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R +G+  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+     N I     I +  +    +EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM   G       +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RGRALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDF 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +   + I +  +A    EA  +  +   AG + D   +  +
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  N+K+   + VF +MR      +     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M+ R
Sbjct: 240 NLIQEMHNR 248


>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
           [Acantholippia salsoloides]
          Length = 433

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/433 (79%), Positives = 387/433 (89%)

Query: 43  DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           DEMR R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL
Sbjct: 1   DEMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            DYSKAISIFSRLK SG  PDLVAYN  INVFGKAKLF+EAR LI EMR  GV P+T SY
Sbjct: 61  CDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASY 120

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           STLL +YVEN KF+EALSVF+E+ E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK
Sbjct: 121 STLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEK
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL+QEMQ RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIV
Sbjct: 241 ANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 300

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           AYER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFR+A DAGEVKDI+V
Sbjct: 301 AYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITV 360

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQ
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANSVYMEMQ 420

Query: 463 EEGCVFSDQVHFQ 475
           E GCVFSD+VHFQ
Sbjct: 421 EVGCVFSDEVHFQ 433



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 175/388 (45%), Gaps = 45/388 (11%)

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL             
Sbjct: 1   DEMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL------------- 47

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                                 V Y+ L+ +  +   + +AI +F  ++R     ++V Y
Sbjct: 48  ----------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAY 85

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N  I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F +LR 
Sbjct: 86  NAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELRE 145

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
               +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    E
Sbjct: 146 MKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 205

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +FR        +++  +  M+ ++ +  ++     + ++M+  G  P+S   + +++
Sbjct: 206 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIIS 265

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNI 502
            +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L S  NI
Sbjct: 266 IWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPDNI 324

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNR 530
            +    H++AG    A R+ +A+ +  R
Sbjct: 325 PRDTAIHILAG----AGRIEEATYVFRR 348



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 4/316 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR   + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  +
Sbjct: 3   MRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 62

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+  I ++GKA     A  L  ++R +GV  +   Y T
Sbjct: 63  YSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYST 122

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  ELR+   +   T   I+     + G  +EA  +F      G
Sbjct: 123 LLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 182

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 183 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 242

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   Y
Sbjct: 243 NLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 302

Query: 516 ERANRLNDASRIMNRM 531
           ERA  +  A R+++ +
Sbjct: 303 ERAGLVAHAKRLLHEL 318



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 6/251 (2%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM++R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 2   EMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 62  DYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYS 121

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF ++R      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 122 TLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLND 523
           G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 524 ASRIMNRMNKR 534
           A+ ++  M  R
Sbjct: 241 ANNLIQEMQGR 251


>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 426

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           RVGLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RVGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS +IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 171/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++AG    A R+ +A+
Sbjct: 325 IAIHILAG----AGRIEEAT 340



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 39/307 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 11  TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           + SG   D V Y  MI  + +  L   A+ L+ E+R     PNT    T +T+     + 
Sbjct: 71  KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKF 130

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS------ 435
            EA  VF +  +   + D++    MI+++ +        ++F  MR  G  P+       
Sbjct: 131 LEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 190

Query: 436 --------------HIIALV-----------LNS----YGKLREFETADDLYSEMQEEGC 466
                         H+  L+            NS    YGK  E E A++L  EMQ  G 
Sbjct: 191 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGI 250

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++G     +    LF++L S      + L+  +   YER   +  A R
Sbjct: 251 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKR 310

Query: 527 IMNRMNK 533
           +++ + +
Sbjct: 311 LLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 426

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/426 (79%), Positives = 388/426 (91%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RDRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI+PDLV YN+MINVFGKAKLF+EAR LI EMR  GV PDTVSY+ L
Sbjct: 61  SKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTAL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFWSMRK+GI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPNAITYSTII+IWGK GKLDRAA+LF+KLRSSG+EID VLYQTMIVAYE
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLV+HAKRLLHEL+ P+ IPR+TAI ILARAGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVSHAKRLLHELKTPDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ KKY+N++EVF+KMR   YF DS++IALVLN+YGKL EFE A+D+Y+EMQ+EG
Sbjct: 361 MIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKANDVYTEMQDEG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 166/338 (49%), Gaps = 10/338 (2%)

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T + +I  +G+  +  DA      M +  +   +V Y+ L+ +  +   + +AI +F
Sbjct: 8   DRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIF 67

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++R  I  ++V YN+MI ++GK+    +A +L+ EM+  G+ P+ ++Y+ ++ ++ + 
Sbjct: 68  SRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVEN 127

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
            K   A  +F ++R     +D      MI  Y ++G+   A +L   +R    +PN +  
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSY 187

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T + +   A    EA  +FR        +++  +  M+ ++ +  ++     + ++M+S
Sbjct: 188 NTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQS 247

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFN 487
            G  P++   + +++ +GK+ + + A  L+ +++  G +  DQV +Q M+  Y      +
Sbjct: 248 RGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSG-IEIDQVLYQTMIVAYERAGLVS 306

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
             + L   L +  NI +    H++A    RA R+ +A+
Sbjct: 307 HAKRLLHELKTPDNIPRDTAIHILA----RAGRIEEAT 340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 149/315 (47%), Gaps = 4/315 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R   + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RDRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R++GV  D V Y  +
Sbjct: 61  SKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTAL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LFE+L S      + L+  +   YE
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRM 531
           RA  ++ A R+++ +
Sbjct: 301 RAGLVSHAKRLLHEL 315


>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 426

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
 gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 426

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV PDT SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  D   Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   D + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 426

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV PDT SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF++MR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  D   Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   D + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 426

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 384/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG +PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 426

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG +PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 145/317 (45%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R   + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T+
Sbjct: 61  SKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+       T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           ++R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR    F D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
 gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
 gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 426

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
           inaguensis]
          Length = 433

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/433 (78%), Positives = 387/433 (89%)

Query: 43  DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           DEMRQR ++PDRYTYSTLIT FGKEG+FD+A SWLQ+MEQD+V GDL+LYSNLIEL+ KL
Sbjct: 1   DEMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKL 60

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SY
Sbjct: 61  CDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSY 120

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           STLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MGI+PSVVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEK
Sbjct: 181 MGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIV
Sbjct: 241 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 300

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           AYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAG VKDI+V
Sbjct: 301 AYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGXVKDITV 360

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  MI L S+ KKY+NV+EVF+K R  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y EMQ
Sbjct: 361 FERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 420

Query: 463 EEGCVFSDQVHFQ 475
           E GCVFSD+VHFQ
Sbjct: 421 EVGCVFSDEVHFQ 433



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 146/318 (45%), Gaps = 4/318 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MR+  + P   +Y+TL+  +G+  LF  A    + M++ ++  +++ Y+ +I++  K  +
Sbjct: 3   MRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCD 62

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           + KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T
Sbjct: 63  YSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 122

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G
Sbjct: 123 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 182

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               +  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A+
Sbjct: 183 IEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 242

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   Y
Sbjct: 243 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 302

Query: 516 ERANRLNDASRIMNRMNK 533
           ERA  +  A R+++ + +
Sbjct: 303 ERAGLVAHAKRLLHELKR 320



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 6/251 (2%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D +LY  +I    ++ 
Sbjct: 2   EMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLC 61

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + + 
Sbjct: 62  DYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 121

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLND 523
           G   S   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      
Sbjct: 182 GIEPSVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 240

Query: 524 ASRIMNRMNKR 534
           A+ ++  M  R
Sbjct: 241 ANNLIQEMQSR 251


>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 425

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/425 (80%), Positives = 382/425 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSD 470
           CVFSD
Sbjct: 421 CVFSD 425



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 426

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNXMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 426

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 146/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV      Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG     + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 426

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 426

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIXVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  N+K+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 426

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGR EEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRXEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 426

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A   F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   +  F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 426

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/425 (80%), Positives = 380/425 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           RZR ++P+RYTYSTLIT FGKEG+FD A+SWLQ MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI PD VAYN+MINVFGKAKLFKEAR LI EM+  GV PDTVSYSTL
Sbjct: 61  SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFWSMRK+GI
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+V+SYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEM N GIEPNAITYSTII+IWGK GKLDRAA LFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TA  ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAXHILAGAGRIEEATWVFRQAIDAGEVKDITVFSR 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A  +Y  MQ+EG
Sbjct: 361 MIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXVYMNMQDEG 420

Query: 466 CVFSD 470
           C FSD
Sbjct: 421 CAFSD 425



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 172/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RZ+ + P+  +YSTL+  + +   F +ALS    M +   P DL                
Sbjct: 1   RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R  I  + V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+   ++A +L+ EM+  G+ P+ ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++ +   A +L   +R    +PN I   T + +   A    EA  
Sbjct: 146 SLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M + G  P++   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAXLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++AG    A R+ +A+
Sbjct: 325 TAXHILAG----AGRIEEAT 340



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 150/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  +++++GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+       T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM   G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317


>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 426

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFS+LK SGI PDLVAYN+MINVFGKA+LF+EAR LI EMR  GV P+TVSYSTL
Sbjct: 61  SKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN +F EALSVFAEM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+I QNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR SG+EID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++PN IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPNNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVFEKMR  GYFPDS++IA+VLN+YGKL +FE A+ +Y EMQ+EG
Sbjct: 361 MISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFENANGVYMEMQDEG 420

Query: 466 CVFSDQ 471
           CVF D+
Sbjct: 421 CVFPDE 426



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 210/420 (50%), Gaps = 8/420 (1%)

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           +   + PD   Y+T+I  FGK  LF  A   +++M +  V  D V YS L+ L  +   +
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            +A+S+F+++       DL   N MI+V+G+  + ++A  L   MR  G+ P+ VSY+TL
Sbjct: 61  SKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTL 120

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           L +Y E + F EA+ +F  M+  +   ++ T N MI +YG+    ++A  L   M+  GI
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EPN ++Y+T++ ++G A     A  LF+ ++   +  + V Y TM++ Y +      A  
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 356 LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           L+ E++    +PN+I   T I+I  + G+++ A  +F++   +G   D  ++  MI  + 
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYE 300

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           R    A+   +  +++     P    I  +L   G++ E   A  ++ +  + G V    
Sbjct: 301 RAGLVAHAKRLLHELKRPNNIPRDTAIH-ILAGAGRIEE---ATWVFRQAIDAGEVKDIT 356

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           V  +M+SL+   K +  +  +FE++          +  VV   Y + ++  +A+ +   M
Sbjct: 357 VFERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFENANGVYMEM 416



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 149/317 (47%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R   + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++  +++  GI P+ + Y+++I ++GKA     A  L  ++R +GV  + V Y T+
Sbjct: 61  SKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE---EATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+    G+++   EA  +F      G 
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L        + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 4/248 (1%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           ++R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RDRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +  +L++    P+ +   + I +  +A    EA  +  +   AG + +   +  +
Sbjct: 61  SKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NK++   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  +L +YG  + F     LF  +     +     ++ +  IY +      A+ 
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 527 IMNRMNKR 534
           ++  M  R
Sbjct: 241 LIQEMQNR 248


>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 426

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLD+AAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFP+S++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 426

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+ VF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 426

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/426 (80%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           RQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I QNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKYAN+IEVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQE G
Sbjct: 361 MIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 45/382 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R++ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR       V+++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L S  NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDASRI 527
              H++AG    A R+ +A+ +
Sbjct: 325 TAIHILAG----AGRIEEATYV 342



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 39/305 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 11  TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           + SG   D V Y  MI  + +  L   A+ L+ E+R     PNT    T +T+     + 
Sbjct: 71  KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKF 130

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS------ 435
            EA  VF +  +   + D++    MI+++ +        ++F  MR  G  P+       
Sbjct: 131 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 190

Query: 436 --------------HIIALV-----------LNS----YGKLREFETADDLYSEMQEEGC 466
                         H+  L+            NS    YGK  E E A++L  EMQ  G 
Sbjct: 191 LRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGI 250

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++G     +    LF++L S      + L+  +   YERA  +  A R
Sbjct: 251 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 310

Query: 527 IMNRM 531
           +++ +
Sbjct: 311 LLHEL 315



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 4/248 (1%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  +L +YG  + F     LF  +   + +     ++ +  IY +      A+ 
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 527 IMNRMNKR 534
           ++  M  R
Sbjct: 241 LIQEMQNR 248


>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           virgata]
          Length = 424

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/424 (80%), Positives = 380/424 (89%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           HGLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL
Sbjct: 1   HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIEL 60

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+
Sbjct: 61  SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPN 120

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW
Sbjct: 121 TASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I QNVVTYN+M+ IYGK+L
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTL 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           EHEKA NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQ
Sbjct: 241 EHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQ 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           TM VAYER GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVK
Sbjct: 301 TMXVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK 360

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           DI+VF  MI LFS+ KKYANVIEVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y
Sbjct: 361 DITVFERMIHLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVY 420

Query: 459 SEMQ 462
            EMQ
Sbjct: 421 MEMQ 424



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 178/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL----------- 51

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 52  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 87

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 88  AYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEM 147

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 148 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 207

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR       V+++  +  M+ ++ +  ++     + ++M++ G  P+S   + +
Sbjct: 208 GEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTI 267

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQV +Q + +   R       + L   L S  
Sbjct: 268 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMXVAYERAGLVAHAKRLLHELKSPD 326

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 327 NIPRDTAIHILAG----AGRIEEATYV 349



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 149/320 (46%), Gaps = 4/320 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +  
Sbjct: 63  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 122

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 242

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302

Query: 512 AGIYERANRLNDASRIMNRM 531
              YERA  +  A R+++ +
Sbjct: 303 XVAYERAGLVAHAKRLLHEL 322



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 4/254 (1%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 2   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 61

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 62  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNT 121

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 122 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           M++ G   +   +  +L +YG  + F     LF  +   + +     ++ +  IY +   
Sbjct: 182 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLE 241

Query: 521 LNDASRIMNRMNKR 534
              A+ ++  M  R
Sbjct: 242 HEKANNLIQEMQNR 255


>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 426

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/426 (79%), Positives = 381/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
            KAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  XKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+FAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRS GV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T+
Sbjct: 61  XKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  XKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 426

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/426 (79%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I+QNVVTYN+M+ IYGK+LEH KA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 171/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++AG    A R+ +A+
Sbjct: 325 IAIHILAG----AGRIEEAT 340



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 149/319 (46%), Gaps = 8/319 (2%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  ++R++GV  +   Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL--VLNSYGKLREFETA 454
             ++  +  ++ ++   + +   I +F  M+      D +++    ++  YGK  E   A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI--DQNVVTYNSMMMIYGKTLEHVKA 238

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
           ++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L+  +   
Sbjct: 239 NNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVA 298

Query: 515 YERANRLNDASRIMNRMNK 533
           YERA  +  A R+++ + +
Sbjct: 299 YERAGLVAHAKRLLHELKR 317


>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 426

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/426 (80%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG +PDLVAYN MINVFG AKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAA+LFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 158/387 (40%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++G +    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +   A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQHR 248


>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 426

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/426 (79%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SY+TL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK I QNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGKAGKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           + GLVAHAKRLLHEL+ P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEV+DI+VF  
Sbjct: 301 KAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKYANV+EVF+KMR  GYFPDS++IALVLN+YGKL EF+ A+ +Y EMQE G
Sbjct: 361 MIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 173/382 (45%), Gaps = 45/382 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +Y+T++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR       V+++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K  + + A  L+ +++  G V  DQV +Q M+  Y         + L   L S  NI + 
Sbjct: 266 KAGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDASRI 527
              H++AG    A R+ +A+ +
Sbjct: 325 TAIHILAG----AGRIEEATYV 342



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 39/305 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 11  TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           + SG   D V Y  MI  + +  L   A+ L+ E+R     PNT    T +T+     + 
Sbjct: 71  KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKF 130

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS------ 435
            EA  VF +  +   + D++    MI+++ +        ++F  MR  G  P+       
Sbjct: 131 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 190

Query: 436 --------------HIIALV-----------LNS----YGKLREFETADDLYSEMQEEGC 466
                         H+  L+            NS    YGK  E E A++L  EMQ  G 
Sbjct: 191 LRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGI 250

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++G     +    LF++L S      + L+  +   YE+A  +  A R
Sbjct: 251 EPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKR 310

Query: 527 IMNRM 531
           +++ +
Sbjct: 311 LLHEL 315



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 4/248 (1%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  +L +YG  + F     LF  +   + +     ++ +  IY +      A+ 
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 527 IMNRMNKR 534
           ++  M  R
Sbjct: 241 LIQEMQNR 248


>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 426

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/426 (79%), Positives = 385/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           RQRG++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID +L+QTMIVAYE
Sbjct: 241 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y EMQE G
Sbjct: 361 MIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 173/382 (45%), Gaps = 45/382 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R++G+ PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREJKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G +  DQ+ FQ M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDASRI 527
              H++AG    A R+ +A+ +
Sbjct: 325 TAIHILAG----AGRIEEATYV 342



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+ G+ P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T+
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YE
Sbjct: 241 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + RG+ P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + +   +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQSR 248


>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 426

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/426 (79%), Positives = 385/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A++WLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+TVSYSTL
Sbjct: 61  SKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EAL+VFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPN+ITYSTII+IW K GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA +GRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGSGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY+NV+EVF+KMR  GYFPDS++ ALVLN+YGKL EF+ A+++Y EMQ+EG
Sbjct: 361 MIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLHEFDKANNVYIEMQDEG 420

Query: 466 CVFSDQ 471
           C+FSD+
Sbjct: 421 CLFSDE 426



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 171/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  AL+   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN ++YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +++ + 
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWS 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KIGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++AG    + R+ +A+
Sbjct: 325 TAIHILAG----SGRIEEAT 340



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 39/307 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A   +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 11  TYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           + SG   D V Y  MI  + +  L   A+ L+ E+R     PNT+   T +T+     + 
Sbjct: 71  KRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKF 130

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS------ 435
            EA  VF +  +   + D++    MI+++ +        ++F  MR  G  P+       
Sbjct: 131 LEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 190

Query: 436 --------------HIIALV-----------LNS----YGKLREFETADDLYSEMQEEGC 466
                         H+  L+            NS    YGK  E E A++L  EMQ  G 
Sbjct: 191 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 250

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++      +    LF++L S      + L+  +   YERA  +  A R
Sbjct: 251 EPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 310

Query: 527 IMNRMNK 533
           +++ + +
Sbjct: 311 LLHELKR 317



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + +   +  +
Sbjct: 61  SKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQSR 248


>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 426

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/426 (80%), Positives = 381/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK S   PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RSGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KM   GYFPDS++IALVLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSRFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YER+  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERSGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
          Length = 426

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/426 (79%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PDRYTYSTLIT FGKEG FD A+SWLQ+ME+DRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RXRALSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI PDLVAYN+MINVFGKAKLFKEAR LI EMR  GV P+T+SYSTL
Sbjct: 61  SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDL TCNIMIDVYGQL MAK+AD+LFW  RKM I
Sbjct: 121 LTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTM+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN ITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID VLYQTMI+ YE
Sbjct: 241 LIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEATWVFRQA +AGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIEAGEVKDITVFEH 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ KKY+N+IEVF+KMR  GYFPDS +IALVLN+YGKL+EF+ A+++Y EMQ+EG
Sbjct: 361 MIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQEFDKANEVYMEMQDEG 420

Query: 466 CVFSDQ 471
           C+FSD+
Sbjct: 421 CIFSDE 426



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 164/387 (42%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R + + PD  +YSTL+  + +  +F +ALS   +M E   P DL                
Sbjct: 1   RXRALSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+   ++A +L+ EM+  G+ PN I+YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVFAEMREIQC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D +    MI  Y ++G+   A +L    R    +PN +   T + +   A    EA  
Sbjct: 146 SLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNTM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIITYERAGLVAHAKRLLHELKR 317


>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           urticoides]
          Length = 423

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/423 (80%), Positives = 384/423 (90%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL+RKL DYSKAISIFSRL
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           KSSG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYSTLL +YVEN KF
Sbjct: 61  KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
           +EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI+P+VVSYNTL
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           LRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA NL+QEMQ+RGI
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 240

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVAYER GLVAHAKR
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 300

Query: 356 LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           LLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF  MI L S+ KK
Sbjct: 301 LLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKK 360

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           Y+NV+EVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y EMQE GCVFSD+VHFQ
Sbjct: 361 YSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEVHFQ 420

Query: 476 MLS 478
           MLS
Sbjct: 421 MLS 423



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 160/337 (47%), Gaps = 10/337 (2%)

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +I  +G+  +   A      M +  +   +V Y+ L+ +  +   + +AI +F  +
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +      ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K 
Sbjct: 61  KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  +F ++R     +D      MI  Y ++G+   A +L   +R    +PN +   T 
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           + +   A    EA  +FR        +++  +  MI ++ +  ++     + ++M+S G 
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 240

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
            P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         +
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAK 299

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
            L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 300 RLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 332



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 144/307 (46%), Gaps = 4/307 (1%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  K  ++ KA ++   +
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           ++ G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T++  Y      
Sbjct: 61  KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120

Query: 351 AHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +  E+R+   +   T   I+     + G  +EA  +F      G   ++  +  +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++   + +   I +F  M+      +      ++  YGK  E E A++L  EMQ  G 
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 240

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++G     +    LF++L S      + L   +   YERA  +  A R
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 300

Query: 527 IMNRMNK 533
           +++ + +
Sbjct: 301 LLHELKR 307



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 33/270 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
           +SSG   D V Y  MI  + +  L   A+ L+ E++    +P  T+              
Sbjct: 61  KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS-------------- 106

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
                            +  ++ ++  NKK+   + VF +MR      D     ++++ Y
Sbjct: 107 -----------------YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 149

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
           G+L   + AD L+  M++ G   +   +  +L +YG  + F     LF RL    NI + 
Sbjct: 150 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQN 208

Query: 506 EL-HHVVAGIYERANRLNDASRIMNRMNKR 534
            + ++ +  IY +      A+ ++  M  R
Sbjct: 209 VVTYNSMIMIYGKTLEHEKANNLIQEMQSR 238


>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           macropoda]
          Length = 427

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/427 (79%), Positives = 384/427 (89%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           +GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL
Sbjct: 1   YGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIEL 60

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+
Sbjct: 61  SRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPN 120

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW
Sbjct: 121 TXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M  IYGK+L
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTL 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           EHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID +L+Q
Sbjct: 241 EHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQ 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           TMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVK
Sbjct: 301 TMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK 360

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           DI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y
Sbjct: 361 DITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVY 420

Query: 459 SEMQEEG 465
            EMQE G
Sbjct: 421 MEMQEVG 427



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 148/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 3   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 63  KLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTX 122

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      +   YGK  E 
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEH 242

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 243 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTM 302

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKR 324



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 2   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 61

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 62  RKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 121

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 122 XSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 182 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMXMIYGKTL 240

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 241 EHEKANNLIQEMQSR 255


>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 426

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/426 (79%), Positives = 383/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RGRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN+MINVFGKAKLF+EAR LI EMR  GV PDTVSY+TL
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L ++VEN +F+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK+GI
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR+SGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRJEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I LFS+ KKY NV+EVF+KMR   YFPDS++IALVLN+YGKL EFE A+ +Y EMQ+EG
Sbjct: 361 LIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420

Query: 466 CVFSDQ 471
           C FSD+
Sbjct: 421 CXFSDE 426



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 170/380 (44%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R + + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RGRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ P+ ++Y+T++ +  +  +   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRNSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++A     A RJ +A+
Sbjct: 325 TAIHILAA----AGRJEEAT 340



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 148/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R   + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RGRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+++I ++GKA     A  L  ++R++GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  +        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L +      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RGRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +   + I +  +A    EA  +  +   AG + D   +  +
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + +   NK++   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 426

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/426 (78%), Positives = 385/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PD+YTYSTLIT FGKEG+FD A+SWLQ+ME DRV GDL LYSNLIEL+RKL DY
Sbjct: 1   RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SGI PDLV YN+MINVFGKAKLF+EAR LI EMR  GV PDTVSY+TL
Sbjct: 61  SKAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFWSMRK+G+
Sbjct: 121 LTMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGV 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVY +AELFGEA HLFRLMQRK+IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPNAITYSTII+IWGK GKLDRAAMLF+KLRSSG+EID VLYQTMIVAYE
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLV+HAKRLLHEL+ P+ IPR+TAI ILA +GR+EEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVSHAKRLLHELKTPDNIPRDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQ 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+LFS+ +KY+NV+EVF+KMR  GYFPDS++IALVLN+YGKL +FE A+D+Y EMQ+EG
Sbjct: 361 MIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQDEG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 174/380 (45%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F +ALS   +M       DL                
Sbjct: 1   RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXL-------------- 46

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                                Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+M
Sbjct: 47  ---------------------YSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVVYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ P+ ++Y+T++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + + + A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M+S G  P++   + +++ +G
Sbjct: 206 LFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G +  DQV +Q M+  Y      +  + L   L +  NI + 
Sbjct: 266 KVGKLDRAAMLFEKLRSSG-IEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
               ++AG    + R+ +A+
Sbjct: 325 TAIQILAG----SGRMEEAT 340



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 148/315 (46%), Gaps = 4/315 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M+   +  ++  Y+ +I++  K  ++
Sbjct: 1   RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R+ GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGV 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++S  + +     +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LFE+L S      + L+  +   YE
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRM 531
           RA  ++ A R+++ +
Sbjct: 301 RAGLVSHAKRLLHEL 315


>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 426

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/426 (79%), Positives = 384/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           RQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQD+V GDLVLYSNLIEL+RKL DY
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK+SG  PDLVAYN MI VFGKAKLF+EAR LI EM+  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVAYE
Sbjct: 241 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 177/370 (47%), Gaps = 40/370 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+P + AYN ++    +AK +  A  L  EM+  G+ P+  +YSTL+T + +   F  A+
Sbjct: 75  YTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEAL 134

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 135 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G A+LF EA  L   M+ + ++ + V+Y                                
Sbjct: 195 GDAELFGEAIHLFRLMQRKNIEQNVVTY-------------------------------- 222

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N MI +YG+    + A+ L   M+  GI+P+ ++Y+T++ ++G+      A  LF+ 
Sbjct: 223 ---NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 279

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++   +E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+
Sbjct: 280 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGR 335

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  +F++   +G   D  +++ MI    +    A+   +  ++R     P    I I
Sbjct: 336 IEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAI 395

Query: 375 LARA-GRIEE 383
           +  A G++ E
Sbjct: 396 VLNAYGKLHE 405



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 171/382 (44%), Gaps = 45/382 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R++ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++      ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  IIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  MI ++ +  ++     + ++M+S G  P+S   + +++ +G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDASRI 527
              H++AG    A R+ +A+ +
Sbjct: 325 TAIHILAG----AGRIEEATYV 342



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 148/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++ ++  ++V Y+ +I++  K  ++
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++N G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T+
Sbjct: 61  SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YE
Sbjct: 241 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 171 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 230

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 231 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 290

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 291 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 346

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+   F
Sbjct: 347 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEF 406

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 407 DKANDVYMEMQ 417



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L+     P+ +     I +  +A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQSR 248


>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 426

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/426 (78%), Positives = 382/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD A+SWLQ+ME+DRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           S+AISIFSRLK SGI PDLVAYN+MINVFGKAKLF+EAR L+ EMR  GV PDTVSY TL
Sbjct: 61  SRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALS+F+EM E+ C  DLTTCNIMIDVYGQL MAK+AD+LFWSMRKMGI
Sbjct: 121 LTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQ+RGIEPNAITYSTII+IWGK GKLDRAAMLFQKLR SG+EID VLYQTMIVAYE
Sbjct: 241 LIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLL EL++P+ IPR+TAI ILA AGRIEEATWVFRQA +AGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLQELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS++KKY NV+EVF+KMR  GYFP S++IALVLN+YGKL EF+ A+ +Y EMQ+EG
Sbjct: 361 MINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDEG 420

Query: 466 CVFSDQ 471
           C FSD+
Sbjct: 421 CAFSDE 426



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 148/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF +A+   + M+   +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A ++   ++  GI P+ + Y+++I ++GKA     A  L  ++R++GV  D V Y T+
Sbjct: 61  SRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  Y        A  L  E+R+       T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ+ G   +   +  ++S++G     +    LF++L        + L+  +   YE
Sbjct: 241 LIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R++  + +
Sbjct: 301 RAGLVAHAKRLLQELKR 317



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +   + I +  +A    EA  +  +   AG + D   +  +
Sbjct: 61  SRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  N+K+   + +F +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMVIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQDR 248


>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 426

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/426 (79%), Positives = 380/426 (89%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PD+VAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IW K GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           + GLVAHAKRLLHEL++P+ IPR+ AI IL  AGRIEEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 KAGLVAHAKRLLHELKRPDNIPRDIAIHILVGAGRIEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI LFS+ KKY NV+EVF+KM   GYFPDS++IAL+LN+YGKL EF+ A+D+Y EMQE G
Sbjct: 361 MIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420

Query: 466 CVFSDQ 471
           CVFSD+
Sbjct: 421 CVFSDE 426



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 158/387 (40%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDIVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++      +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YE+A  +  A R+++ + +
Sbjct: 291 LYQTMIVAYEKAGLVAHAKRLLHELKR 317



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 426

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/426 (78%), Positives = 384/426 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN+MINVF KAKLF+EAR LI EMR  GV PDTVSY+TL
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L ++VEN +F+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRK+GI
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IW K GKLDRAAMLFQKLR+SGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R GLVAHAKRLLHEL++P+ IPR+TAI ILA AGR+EEATWVFRQA DAGEVKDI+VF  
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFER 360

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I LFS+ KKY+NV+EVF+KMR   YFPDS++IALVLN+YGKL EFE A+ +Y EMQ+EG
Sbjct: 361 LIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420

Query: 466 CVFSDQ 471
           C+FSD+
Sbjct: 421 CIFSDE 426



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 169/380 (44%), Gaps = 45/380 (11%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P DL                
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL---------------- 44

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                              V Y+ L+ +  +   + +AI +F  ++R     ++V YN+M
Sbjct: 45  -------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++ K+    +A +L+ EM+  G+ P+ ++Y+T++ +  +  +   A  +F ++R    
Sbjct: 86  INVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR        +++  +  M+ ++ +  ++     + ++M++ G  P+S   + +++ + 
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWV 265

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKK 505
           K+ + + A  L+ +++  G V  DQV +Q M+  Y         + L   L    NI + 
Sbjct: 266 KVGKLDRAAMLFQKLRNSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324

Query: 506 ELHHVVAGIYERANRLNDAS 525
              H++A     A RL +A+
Sbjct: 325 TAIHILAA----AGRLEEAT 340



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA ++   ++  G  P+ + Y+++I ++ KA     A  L  ++R++GV  D V Y T+
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           +  +        A  +  E+R+   +   T   I+     + G  +EA  +F      G 
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A++
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EMQ  G   +   +  ++S++      +    LF++L +      + L+  +   YE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYE 300

Query: 517 RANRLNDASRIMNRMNK 533
           RA  +  A R+++ + +
Sbjct: 301 RAGLVAHAKRLLHELKR 317



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +   + I +  +A    EA  +  +   AG + D   +  +
Sbjct: 61  SKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + +   NK++   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           alba]
          Length = 419

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/419 (79%), Positives = 379/419 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAI+IFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 SSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           I+VF  MI L S+ KKY NV+EVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y
Sbjct: 361 ITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 419



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 176/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL----------- 50

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 51  ------------------------VLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLV 86

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 87  AYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEM 146

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 206

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 207 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTI 266

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    
Sbjct: 267 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 325

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 326 NIPRDTAIHILAG----AGRIEEATYV 348



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 148/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA  +   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTS 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F   
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           S +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 SSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
           [Acantholippia seriphioides]
          Length = 416

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/415 (80%), Positives = 374/415 (90%)

Query: 44  EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
           EMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL 
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 61  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYS 120

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM EV C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA
Sbjct: 181 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 240

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVA
Sbjct: 241 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 300

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 301 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 360

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
             MI L S+ KKYANV+EVF+KMR  GYFPDS +IALVLN+YGKL EF+ A+D+Y
Sbjct: 361 ERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSDVIALVLNAYGKLHEFDKANDVY 415



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 174/384 (45%), Gaps = 45/384 (11%)

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL              
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL-------------- 46

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
                                V Y+ L+ +  +   + +AI +F  ++R     ++V YN
Sbjct: 47  ---------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 85

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R  
Sbjct: 86  AMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREV 145

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
              +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA
Sbjct: 146 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 205

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +FR        +++  +  MI ++ +  ++     + ++M+S G  P+S   + +++ 
Sbjct: 206 IHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISI 265

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNIN 503
           +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    NI 
Sbjct: 266 WGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 324

Query: 504 KKELHHVVAGIYERANRLNDASRI 527
           +    H++AG    A R+ +A+ +
Sbjct: 325 RDTAIHILAG----AGRIEEATYV 344



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 39/318 (12%)

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  +  TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K   
Sbjct: 2   MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 61

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
             +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T
Sbjct: 62  YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYST 121

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G
Sbjct: 122 LLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 181

Query: 431 YFPDS--------------------HIIALV-----------LNS----YGKLREFETAD 455
             P+                     H+  L+            NS    YGK  E E A+
Sbjct: 182 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 241

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   Y
Sbjct: 242 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 301

Query: 516 ERANRLNDASRIMNRMNK 533
           ERA  +  A R+++ + +
Sbjct: 302 ERAGLVAHAKRLLHELKR 319



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 6/251 (2%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++ 
Sbjct: 1   EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A  +   L++    P+ +     I +  +A    EA  +  +   +G + + + + 
Sbjct: 61  DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYS 120

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ 
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLND 523
           G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      
Sbjct: 181 GIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 239

Query: 524 ASRIMNRMNKR 534
           A+ ++  M  R
Sbjct: 240 ANNLIQEMQSR 250


>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           montevidensis]
          Length = 418

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/418 (79%), Positives = 376/418 (89%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DYSKAISIFSRL
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           K SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYSTLL +YVEN KF
Sbjct: 61  KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
           +EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI+P+VVSYNTL
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           LRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA NL+QEMQ+RGI
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 240

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG EID +L+QTMIVAYER GLVAHAKR
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKR 300

Query: 356 LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           LLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF  MI L S+ KK
Sbjct: 301 LLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKK 360

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           Y+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y EMQE GCVFSD+VH
Sbjct: 361 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEVH 418



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 142/307 (46%), Gaps = 4/307 (1%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  K  ++ KA ++   +
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           +  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +   Y T++  Y      
Sbjct: 61  KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120

Query: 351 AHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +  E+R+   +   T   I+     + G  +EA  +F      G   ++  +  +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++   + +   I +F  M+      +      ++  YGK  E E A++L  EMQ  G 
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 240

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  ++S++G     +    LF++L S      + L   +   YERA  +  A R
Sbjct: 241 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKR 300

Query: 527 IMNRMNK 533
           +++ + +
Sbjct: 301 LLHELKR 307



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 33/270 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T+I  +GK    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 1   TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
           + SG   D V Y  MI  + +  L   A+ L+ E++    +P  T+              
Sbjct: 61  KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTS-------------- 106

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
                            +  ++ ++  NKK+   + VF +MR      D     ++++ Y
Sbjct: 107 -----------------YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 149

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
           G+L   + AD L+  M++ G   +   +  +L +YG  + F     LF RL    NI + 
Sbjct: 150 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQN 208

Query: 506 EL-HHVVAGIYERANRLNDASRIMNRMNKR 534
            + ++ +  IY +      A+ ++  M  R
Sbjct: 209 VVTYNSMMMIYGKTLEHEKANNLIQEMQSR 238


>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           origanoides]
          Length = 408

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/408 (80%), Positives = 369/408 (90%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           GLFDEMRQR ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYSTLL +YVEN KF+EALSVF+EM E+ C LDL TCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 121 TSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 241 HEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 300

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           MIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 301 MIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           I+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS++IA+VLN+YGK
Sbjct: 361 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 408



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 176/387 (45%), Gaps = 45/387 (11%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L +EMR++ + PD  +YSTL+  + +   F  ALS   +M +   P DL           
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDL----------- 50

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                                   V Y+ L+ +  +   + +AI +F  ++R     ++V
Sbjct: 51  ------------------------VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 86

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN MI ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++
Sbjct: 87  AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEM 146

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R     +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A   
Sbjct: 147 REIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 206

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  +FR        +++  +  M+ ++ +  ++     + ++M+S G  P+S   + +
Sbjct: 207 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTI 266

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           ++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    
Sbjct: 267 ISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD 325

Query: 501 NINKKELHHVVAGIYERANRLNDASRI 527
           NI +    H++AG    A R+ +A+ +
Sbjct: 326 NIPRDTAIHILAG----AGRIEEATYV 348



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 148/322 (45%), Gaps = 4/322 (1%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR+  + P   +Y+TL+  +G+  LF  A+   + M++  +  ++V Y+ +I++  
Sbjct: 2   LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ KA ++   ++  G  P+ + Y+ +I ++GKA     A  L  +++++GV  +  
Sbjct: 62  KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRIEEATWVFRQA 391
            Y T++  Y        A  +  E+R+   +         I +  + G  +EA  +F   
Sbjct: 122 SYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGM 181

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E 
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301

Query: 512 AGIYERANRLNDASRIMNRMNK 533
              YERA  +  A R+++ + +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKR 323



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  EM+ R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I   
Sbjct: 1   GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++   + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + 
Sbjct: 61  RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  ++ ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  
Sbjct: 121 TSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWG 180

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           M++ G   +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +  
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTL 239

Query: 520 RLNDASRIMNRMNKR 534
               A+ ++  M  R
Sbjct: 240 EHEKANNLIQEMQSR 254


>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
           nodiflora]
          Length = 419

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/419 (78%), Positives = 367/419 (87%)

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           IT FGKEG+FD A+SWLQ+ME D V GDLVL SNLIEL+RKL DYSKAISIFSRLK SG 
Sbjct: 1   ITHFGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGX 60

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL AYN MINVFGKAKLF+EAR LI EM+  GV P T SYSTLL +YVEN KF+EALS
Sbjct: 61  XPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALS 120

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VF+EM E  C  DL TCNIMIDVYGQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG
Sbjct: 121 VFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYG 180

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+I
Sbjct: 181 DAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSI 240

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVAYER GLVAHAKRLLHEL
Sbjct: 241 TYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHEL 300

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           ++P+ IPR+TAI ILA AGRIEEAT+VFRQA D+GEVKDI+VF  MI L S+ KKY NV+
Sbjct: 301 KRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDSGEVKDITVFERMIHLLSKYKKYMNVV 360

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           EVF+KMR  GYFPDS++IA+VLN+YGKL EF+ A D+Y EMQE GCVFSD+VHFQMLSL
Sbjct: 361 EVFDKMRGLGYFPDSNVIAVVLNAYGKLHEFDKASDIYMEMQEVGCVFSDEVHFQMLSL 419



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 173/368 (47%), Gaps = 40/368 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + AYN ++    +AK +  A  L  EM+  G+ P   +YSTL+T + +   F  A+S 
Sbjct: 62  PDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSV 121

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+G 
Sbjct: 122 FSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGD 181

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+LF EA  L   M+ + ++ + V+Y                                  
Sbjct: 182 AELFGEAIHLFRLMQRKNIEQNVVTY---------------------------------- 207

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MI +YG+    + A+ L   M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++
Sbjct: 208 -NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 266

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+++
Sbjct: 267 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIE 322

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  +F++   SG   D  +++ MI    +     +   +  ++R     P    I ++ 
Sbjct: 323 EATYVFRQAIDSGEVKDITVFERMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVL 382

Query: 377 RA-GRIEE 383
            A G++ E
Sbjct: 383 NAYGKLHE 390



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++      ++  YN MI ++GK+    +A +L+ EM+  G+ P   +YST
Sbjct: 45  YSKAISIFSRLKXSGXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYST 104

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R      D      MI  Y ++G+   A +L   +R   
Sbjct: 105 LLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMG 164

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  MI ++ +  ++    
Sbjct: 165 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 224

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 225 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 283

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 284 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 327



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 156 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 215

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 216 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 275

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 276 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 331

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+   F
Sbjct: 332 IDSGEVKDITVFERMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLHEF 391

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 392 DKASDIYMEMQ 402



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 39/299 (13%)

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +GK    + A + +Q+M+   +  + +  S +I +  K     +A  +F +L+ SG   D
Sbjct: 4   FGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPD 63

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFR 389
              Y  MI  + +  L   A+ L+ E++    +P  T+    +T+     +  EA  VF 
Sbjct: 64  LXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFS 123

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS-------------- 435
           +  +   + D+     MI+++ +        ++F  MR  G  P+               
Sbjct: 124 EMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 183

Query: 436 ------HIIALV-----------LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHF 474
                 H+  L+            NS    YGK  E E A++L  EMQ  G   +   + 
Sbjct: 184 LFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 243

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            ++S++G     +    LF++L S      + L   +   YERA  +  A R+++ + +
Sbjct: 244 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 302



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 2/163 (1%)

Query: 372 ITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           IT   + G  + A +W+ +   D     D+ +   +IEL  +   Y+  I +F +++ +G
Sbjct: 1   ITHFGKEGLFDXALSWLQKMEXDXVP-GDLVLXSNLIELSRKLCDYSKAISIFSRLKXSG 59

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD      ++N +GK + F  A  L  EM+  G +     +  +L++Y     F    
Sbjct: 60  XXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEAL 119

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           S+F  +     +      +++  +Y +     +A ++   M K
Sbjct: 120 SVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRK 162


>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           micrantha]
          Length = 406

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/406 (79%), Positives = 366/406 (90%)

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +SWLQ+MEQD+V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINV
Sbjct: 1   LSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 60

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           FGKAKLF+EAR LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LD
Sbjct: 61  FGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLD 120

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           LTTCNIMIDVYGQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFR
Sbjct: 121 LTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFR 180

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           LMQRK IEQNVVTYN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK G
Sbjct: 181 LMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVG 240

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           KLDRAAMLFQKLRSSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI 
Sbjct: 241 KLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH 300

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           ILA AGRIEEAT+VFRQA DAGE KDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFP
Sbjct: 301 ILAGAGRIEEATYVFRQAIDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 360

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           DS++IA+VLN+YGKL+EF+ A+D+Y EMQE GCVFSD+VHFQMLSL
Sbjct: 361 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEVHFQMLSL 406



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 12/319 (3%)

Query: 216 LFW--SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           L W   M +  +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI +
Sbjct: 1   LSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 60

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D
Sbjct: 61  FGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLD 120

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFR 389
                 MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  +FR
Sbjct: 121 LTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFR 180

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                   +++  +  MI ++ +  ++     + ++M+S G  P+S   + +++ +GK+ 
Sbjct: 181 LMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVG 240

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
           + + A  L+ +++  G V  DQ+ FQ M+  Y         + L   L    NI +    
Sbjct: 241 KLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 299

Query: 509 HVVAGIYERANRLNDASRI 527
           H++AG    A R+ +A+ +
Sbjct: 300 HILAG----AGRIEEATYV 314



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 39/286 (13%)

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
           +Q+M+   +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +
Sbjct: 4   LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 63

Query: 347 VGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
             L   A+ L+ E++     PNT    T +T+     +  EA  VF +  +   + D++ 
Sbjct: 64  AKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTT 123

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV- 441
              MI+++ +        ++F  MR  G  P+                     H+  L+ 
Sbjct: 124 CNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 183

Query: 442 ----------LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
                      NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +
Sbjct: 184 RKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLD 243

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               LF++L S      + L   +   YERA  +  A R+++ + +
Sbjct: 244 RAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 289


>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
           succulentifolia]
          Length = 382

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/382 (80%), Positives = 341/382 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG +PDLVAYN MINVFGKAKLF++AR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EMR  GV P+T SYSTLL +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSGV+ID VLYQTMIVAYER GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEA
Sbjct: 241 LRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           TWVFRQA DAG VKDI+VF  MI LFS+ KKY NV+EVF+KMR  GYFPDS++IALVLN+
Sbjct: 301 TWVFRQAIDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEGC 466
           YGKL EF+ A+D+Y EMQE GC
Sbjct: 361 YGKLHEFDKANDVYMEMQEVGC 382



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 178/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M    V+ +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+F+ ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   ++ + V Y TMI  Y ++
Sbjct: 204 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I     I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGXVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI  + +     +   +  ++R     P    I ++  A G++ E
Sbjct: 320 ERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHE 366



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 165/350 (47%), Gaps = 39/350 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P + AYN ++    +AK +  A  L  EMR  G+ P+  +YSTL+T + +   F  A+
Sbjct: 36  FMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 95

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 96  SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155

Query: 135 GKAKLFKEA----RL-------------------------------LIEEMREQGVKPDT 159
           G A+LF EA    RL                               LI+EM+ +G++P++
Sbjct: 156 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNS 215

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++YST+++++ +  K   A  +F ++      +D      MI  Y +  +   A RL   
Sbjct: 216 ITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHE 275

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +++    P  +  +  + +   A    EA  +FR        +++  +  MI ++ K  +
Sbjct: 276 LKR----PDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGXVKDITVFERMIHLFSKYKK 331

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +     +  +M+  G  P++   + ++  +GK  + D+A  ++ +++  G
Sbjct: 332 YGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 381



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 134/313 (42%), Gaps = 39/313 (12%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+     A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR           
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFR----------- 169

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                   L  R     NV+     M                  YGK  E E A++L  E
Sbjct: 170 --------LMQRKNIEQNVVTYNSMMMI----------------YGKTLEHEKANNLIQE 205

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           MQ  G   +   +  ++S++G     +    LF++L S      + L+  +   YERA  
Sbjct: 206 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 265

Query: 521 LNDASRIMNRMNK 533
           +  A R+++ + +
Sbjct: 266 VAHAKRLLHELKR 278



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D V
Sbjct: 192 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y TMI  + +A L   A+ L+ E++    +PD +     +++     +  EA  VF + 
Sbjct: 252 LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDIAIHILAGAGRIEEATWVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI ++ +     +   +F  MR +G  P       +L  YG+   F
Sbjct: 308 IDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 33/241 (13%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDAR 60

Query: 355 RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            L+ E+R     P   +                               +  ++ ++  NK
Sbjct: 61  SLISEMRTAGVTPNTAS-------------------------------YSTLLTMYVENK 89

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           K+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G   +   + 
Sbjct: 90  KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 149

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNK 533
            +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+ ++  M  
Sbjct: 150 TLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQN 208

Query: 534 R 534
           R
Sbjct: 209 R 209


>gi|255661206|gb|ACU25772.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 399

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/399 (76%), Positives = 343/399 (85%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S LQ+MEQD V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SGI PDLVAYN+MIN
Sbjct: 1   ALSRLQEMEQDHVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIXPDLVAYNSMIN 60

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           VFGKAKLFKEAR LI EM+  GV PDTVSYSTLL +YVEN KF+EALSVFAEM E+ C  
Sbjct: 61  VFGKAKLFKEARSLIXEMKTAGVMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSF 120

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           DLTTCNIMIDVYGQLDMAK+AD+LFWSMRK+GI+P+V+SYNTLLRVYG+AELFGEAJHLF
Sbjct: 121 DLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAJHLF 180

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           RLMQRK IEQNVVTYNTM+ IYGK+LEHEKA NL+QEM NRGIEPNAITYSTI       
Sbjct: 181 RLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIXXXXXXX 240

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
                        RSSGV+ID VLYQTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI
Sbjct: 241 XXXXXXXXXXXXXRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 300

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            ILARAGRIEEATWVFRQA DAGEVKDI+VF  MI+LFS+ KKYANV+EVF+KMR  GYF
Sbjct: 301 HILARAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGFGYF 360

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           PDS++IALVLN+YGKL EF+ A+D+Y  MQ+EGC FSD+
Sbjct: 361 PDSNVIALVLNAYGKLHEFDRANDVYMSMQDEGCAFSDE 399



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 168/368 (45%), Gaps = 40/368 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + AYN ++    +AK ++ A  L  EM+  G+ PD  +YSTL+T + +   F  A+S 
Sbjct: 50  PDLVAYNSMINVFGKAKLFKEARSLIXEMKTAGVMPDTVSYSTLLTMYVENQKFLEALSV 109

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M + + S DL   + +I++  +L    +A  +F  ++  GI P++++YNT++ V+G 
Sbjct: 110 FAEMREIKCSFDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGD 169

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+LF EA  L   M+ + ++ + V+Y+T                                
Sbjct: 170 AELFGEAJHLFRLMQRKNIEQNVVTYNT-------------------------------- 197

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              M+ +YG+    + A+ L   M   GI+P+ ++Y+T+                    +
Sbjct: 198 ---MMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIXXXXXXXXXXXXXXXXXXXXR 254

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + V Y TMI  Y ++     A  L+ E++     P+ I   T I I  +AG+++
Sbjct: 255 SSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILARAGRIE 310

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  +F++   +G   D  ++  MI  + +    A+   +  ++R     P    I ++ 
Sbjct: 311 EATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGFGYFPDSNVIALVL 370

Query: 377 RA-GRIEE 383
            A G++ E
Sbjct: 371 NAYGKLHE 378



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+T++  +G
Sbjct: 144 LFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAJHLFRLMQRKNIEQNVVTYNTMMMIYG 203

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M    +  + + YS +                    +SSG+  D V
Sbjct: 204 KTLEHEKANNLIQEMHNRGIEPNAITYSTIXXXXXXXXXXXXXXXXXXXXRSSGVDIDQV 263

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 264 LYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILARAGRIEEATWVFRQA 319

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T  + MID++ +     +   +F  MR  G  P       +L  YG+   F
Sbjct: 320 IDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGFGYFPDSNVIALVLNAYGKLHEF 379

Query: 246 GEAIHLFRLMQ 256
             A  ++  MQ
Sbjct: 380 DRANDVYMSMQ 390



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 4/203 (1%)

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A + +QEM+   +  + + YS +I +  K     +A  +F +L+ SG+  D V Y +MI 
Sbjct: 1   ALSRLQEMEQDHVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIXPDLVAYNSMIN 60

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            + +  L   A+ L+ E++     P+T+   T +T+     +  EA  VF +  +     
Sbjct: 61  VFGKAKLFKEARSLIXEMKTAGVMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSF 120

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D++    MI+++ +        ++F  MR  G  P+      +L  YG    F  A  L+
Sbjct: 121 DLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAJHLF 180

Query: 459 SEMQEEGCVFSDQVHFQMLSLYG 481
             MQ +    +   +  M+ +YG
Sbjct: 181 RLMQRKNIEQNVVTYNTMMMIYG 203



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+ ++  +IEL  +   Y+  I +F +++ +G  PD      ++N +GK + F+ A  L 
Sbjct: 16  DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIXPDLVAYNSMINVFGKAKLFKEARSLI 75

Query: 459 SEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESL 492
            EM+  G V  D V +  +L++Y   + F  LE+L
Sbjct: 76  XEMKTAG-VMPDTVSYSTLLTMYVENQKF--LEAL 107


>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           brasiliensis]
          Length = 382

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 303/380 (79%), Positives = 341/380 (89%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
           GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR L
Sbjct: 3   GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 62

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           I EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQ
Sbjct: 63  ISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 122

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVT
Sbjct: 123 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 182

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR
Sbjct: 183 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           SSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+
Sbjct: 243 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 302

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VFRQA DAGEVKDI+VF  MI L S+ KKY NV+EVF+KMR  GYFPDS++IA+VLN+YG
Sbjct: 303 VFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYG 362

Query: 447 KLREFETADDLYSEMQEEGC 466
           KL+EF+ A+D+Y EMQE GC
Sbjct: 363 KLQEFDKANDVYMEMQEVGC 382



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +     +   +  ++R     P    I ++  A G+++E
Sbjct: 320 ERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQE 366



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ 
Sbjct: 5   LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIS 64

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y ++G
Sbjct: 65  EMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLG 124

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A +L   +R    +PN +   T + +   A    EA  +FR        +++  + 
Sbjct: 125 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 184

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            MI ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  
Sbjct: 185 SMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244

Query: 465 GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A R+ +
Sbjct: 245 G-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEE 299

Query: 524 ASRI 527
           A+ +
Sbjct: 300 ATYV 303



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 39/273 (14%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E
Sbjct: 6   VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISE 65

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++ +   
Sbjct: 66  MKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 125

Query: 416 YANVIEVFEKMRSAGYFPDS--------------------HIIALV-----------LNS 444
                ++F  MR  G  P+                     H+  L+            NS
Sbjct: 126 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 185

Query: 445 ----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
               YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S  
Sbjct: 186 MIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 245

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + L   +   YERA  +  A R+++ + +
Sbjct: 246 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 278



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+ ++  +IEL  +   Y+  I +F +++ +G+ PD      ++N +GK + F  A  L 
Sbjct: 4   DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           SEM+  G + +   +  +L++Y   K F  LE+L
Sbjct: 64  SEMKTAGVMPNTTSYSTLLTMYVENKKF--LEAL 95



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 331

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           Y   + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 332 YXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           camara]
          Length = 381

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/380 (79%), Positives = 341/380 (89%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
           GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR L
Sbjct: 2   GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           I EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQ
Sbjct: 62  ISEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 121

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVT
Sbjct: 122 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 181

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           SSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+
Sbjct: 242 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 301

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VFRQA DAGEVKDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS++I +VLN+YG
Sbjct: 302 VFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYG 361

Query: 447 KLREFETADDLYSEMQEEGC 466
           KL+EF+ A+D+Y EMQE GC
Sbjct: 362 KLQEFDKANDVYMEMQEVGC 381



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 181/347 (52%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 23  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYSTLLT 82

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 83  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 142

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 202

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 262

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 263 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 318

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    IT++  A G+++E
Sbjct: 319 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQE 365



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ 
Sbjct: 4   LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIS 63

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y ++G
Sbjct: 64  EMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLG 123

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A +L   +R    +PN +   T + +   A    EA  +FR        +++  + 
Sbjct: 124 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 183

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            MI ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  
Sbjct: 184 SMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243

Query: 465 GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A R+ +
Sbjct: 244 G-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEE 298

Query: 524 ASRI 527
           A+ +
Sbjct: 299 ATYV 302



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 131 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 190

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 191 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 306

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEF 366

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 367 DKANDVYMEMQ 377



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 39/273 (14%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E
Sbjct: 5   VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISE 64

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++ +   
Sbjct: 65  MKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 124

Query: 416 YANVIEVFEKMRSAGYFPDS--------------------HIIALV-----------LNS 444
                ++F  MR  G  P+                     H+  L+            NS
Sbjct: 125 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 184

Query: 445 ----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
               YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S  
Sbjct: 185 MIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + L   +   YERA  +  A R+++ + +
Sbjct: 245 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 277



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 272 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 330

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 331 YSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEFDKANDVYMEMQEVG 380



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+ ++  +IEL  +   Y+  I +F +++ +G+ PD      ++N +GK + F  A  L 
Sbjct: 3   DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           SEM+  G   +   +  +L++Y   K F  LE+L
Sbjct: 63  SEMKTAGVXPNTTSYSTLLTMYVENKKF--LEAL 94


>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           velutina]
          Length = 382

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/382 (79%), Positives = 342/382 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVKDI+VF  M+ L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+
Sbjct: 301 TYVFRQAVDAGEVKDITVFERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEGC 466
           YGKL+EF+ A+D+Y EMQE GC
Sbjct: 361 YGKLQEFDKANDVYMEMQEVGC 382



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + M+    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 320 ERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 366



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 150/308 (48%), Gaps = 10/308 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR        +++
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 461 MQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           ++  G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A 
Sbjct: 241 LRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AG 295

Query: 520 RLNDASRI 527
           R+ +A+ +
Sbjct: 296 RIEEATYV 303



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    M+ +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 VDAGEVKDITVFERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L+ E++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV--------- 441
            +        ++F  MR  G  P+                     H+  L+         
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 442 --LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           L S      + L   +   YERA  +  A R+++ + +
Sbjct: 241 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 278



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  ++ L  K   
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVK-DITVFERMVHLLSKYKK 331

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 332 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           fucata]
          Length = 382

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/382 (79%), Positives = 342/382 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSG+EID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVKDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+
Sbjct: 301 TYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEGC 466
           YGKL+EF+ A+D+Y EMQE GC
Sbjct: 361 YGKLQEFDKANDVYMEMQEVGC 382



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   IE + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 320 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 366



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 150/308 (48%), Gaps = 10/308 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR        +++
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 461 MQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           ++  G +  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A 
Sbjct: 241 LRSSG-IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AG 295

Query: 520 RLNDASRI 527
           R+ +A+ +
Sbjct: 296 RIEEATYV 303



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSGI  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L+ E++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++
Sbjct: 61  SLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV--------- 441
            +        ++F  MR  G  P+                     H+  L+         
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 442 --LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           L S      + L   +   YERA  +  A R+++ + +
Sbjct: 241 LRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 278



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  GI  D+  + T+I  + + G+       
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 272

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 331

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 332 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           macrophylla]
          Length = 381

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 303/380 (79%), Positives = 339/380 (89%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
           GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR L
Sbjct: 2   GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           I EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQ
Sbjct: 62  ISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 121

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVT
Sbjct: 122 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 181

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           SSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+
Sbjct: 242 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 301

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VFRQA DAGEVKDI+VF  MI L S+ KKY+NV+EVF KMR  GYFPDS +IA VLN+YG
Sbjct: 302 VFRQAIDAGEVKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYG 361

Query: 447 KLREFETADDLYSEMQEEGC 466
           KL+EF+ A+D+Y EMQE GC
Sbjct: 362 KLQEFDKANDVYMEMQEVGC 381



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 23  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 82

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 83  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 142

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 202

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 262

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 263 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 318

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   + +++R     P    I  +  A G+++E
Sbjct: 319 ERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQE 365



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ 
Sbjct: 4   LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIS 63

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y ++G
Sbjct: 64  EMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLG 123

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A +L   +R    +PN +   T + +   A    EA  +FR        +++  + 
Sbjct: 124 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 183

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            MI ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  
Sbjct: 184 SMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243

Query: 465 GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A R+ +
Sbjct: 244 G-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEE 298

Query: 524 ASRI 527
           A+ +
Sbjct: 299 ATYV 302



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 131 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 190

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 191 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 306

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQEF 366

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 367 DKANDVYMEMQ 377



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 39/273 (14%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E
Sbjct: 5   VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISE 64

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++ +   
Sbjct: 65  MKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 124

Query: 416 YANVIEVFEKMRSAGYFPDS--------------------HIIALV-----------LNS 444
                ++F  MR  G  P+                     H+  L+            NS
Sbjct: 125 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 184

Query: 445 ----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
               YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S  
Sbjct: 185 MIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + L   +   YERA  +  A R+++ + +
Sbjct: 245 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 277



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 272 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKXKK 330

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F++++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 331 YSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEVG 380



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+ ++  +IEL  +   Y+  I +F +++ +G+ PD      ++N +GK + F  A  L 
Sbjct: 3   DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           SEM+  G + +   +  +L++Y   K F  LE+L
Sbjct: 63  SEMKTAGVMPNTTSYSTLLTMYVENKKF--LEAL 94


>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           aristata]
          Length = 382

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 302/382 (79%), Positives = 342/382 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSG+EID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVKDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+
Sbjct: 301 TYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEGC 466
           YGKL+EF+ A+D+Y EMQE GC
Sbjct: 361 YGKLQEFDKANDVYMEMQEVGC 382



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   IE + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 320 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 366



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 150/308 (48%), Gaps = 10/308 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR        +++
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 461 MQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           ++  G +  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A 
Sbjct: 241 LRSSG-IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AG 295

Query: 520 RLNDASRI 527
           R+ +A+ +
Sbjct: 296 RIEEATYV 303



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSGI  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L+ E++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++
Sbjct: 61  SLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV--------- 441
            +        ++F  MR  G  P+                     H+  L+         
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 442 --LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           L S      + L   +   YERA  +  A R+++ + +
Sbjct: 241 LRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 278



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  GI  D+  + T+I  + + G+       
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 272

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 331

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 332 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           hermannioides]
          Length = 382

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 302/382 (79%), Positives = 341/382 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVK I+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+
Sbjct: 301 TYVFRQAIDAGEVKXITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEGC 466
           YGKL+EF+ A+D+Y EMQE GC
Sbjct: 361 YGKLQEFDKANDVYMEMQEVGC 382



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G      ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKXITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 320 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 366



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 39/313 (12%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR           
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFR----------- 169

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                   L  R     NV+  +  M               +  YGK  E E A++L  E
Sbjct: 170 --------LMQRKNIEQNVV-TYNSM---------------MMIYGKTLEHEKANNLIQE 205

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           MQ  G   +   +  ++S++G     +    LF++L S      + L   +   YERA  
Sbjct: 206 MQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGL 265

Query: 521 LNDASRIMNRMNK 533
           +  A R+++ + +
Sbjct: 266 VAHAKRLLHELKR 278



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K     +A  +F +L+SSG+  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +      +T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 IDAGEVKXITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 33/241 (13%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            L+ E++    +P  T+                               +  ++ ++  NK
Sbjct: 61  SLISEMKTAGVMPNTTS-------------------------------YSTLLTMYVENK 89

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           K+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G   +   + 
Sbjct: 90  KFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 149

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNK 533
            +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+ ++  M  
Sbjct: 150 TLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQS 208

Query: 534 R 534
           R
Sbjct: 209 R 209



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/169 (19%), Positives = 70/169 (41%), Gaps = 31/169 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+   A   
Sbjct: 213 PNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272

Query: 77  LQQMEQ-DRVSGD------------------------------LVLYSNLIELARKLSDY 105
           L ++++ D +  D                              + ++  +I L  K   Y
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKXITVFERMIHLLSKYKKY 332

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           S  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 333 SNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           salviifolia]
          Length = 378

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 300/378 (79%), Positives = 339/378 (89%)

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T S
Sbjct: 1   LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 60

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YSTLL++YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MR
Sbjct: 61  YSTLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 120

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           KMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHE
Sbjct: 121 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 180

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMI
Sbjct: 181 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 240

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           VAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+
Sbjct: 241 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDIT 300

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           VF  MI L S+ KKY+NV EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y EM
Sbjct: 301 VFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEM 360

Query: 462 QEEGCVFSDQVHFQMLSL 479
           QE GCVFSD+VHFQMLSL
Sbjct: 361 QEVGCVFSDEVHFQMLSL 378



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 7   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLS 66

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 67  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 126

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 127 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 186

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 187 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 246

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 247 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVF 302

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 303 ERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 349



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 4   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 63

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           +++++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 64  LLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 123

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  M+ ++ +  ++    
Sbjct: 124 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 183

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 184 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 242

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 243 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 286



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 115 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 174

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 175 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 234

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 235 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 290

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 291 VDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 350

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 351 DKANDVYMEMQ 361



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 6   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 65

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           ++     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 66  SMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 125

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 126 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 185

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 186 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 245

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 246 AGLVAHAKRLLHELKR 261



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 34/182 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 196 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 255

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 256 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVK-DITVFERMIHLLSKYKK 314

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYS 163
           YS    +F +++  G  PD      ++N +GK + F +A  +  EM+E G V  D V + 
Sbjct: 315 YSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEVHFQ 374

Query: 164 TL 165
            L
Sbjct: 375 ML 376


>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           pusilla]
          Length = 381

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/381 (78%), Positives = 341/381 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRS+GVEID +L+QTMIV YER GL+AHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSTGVEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVKDI+VF  MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+
Sbjct: 301 TYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNA 360

Query: 445 YGKLREFETADDLYSEMQEEG 465
           YGKL+EF+ A+D+Y EMQE G
Sbjct: 361 YGKLQEFDKANDVYMEMQEVG 381



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    A+   +  ++R     P    I ++  A G+++E
Sbjct: 320 ERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQE 366



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 150/308 (48%), Gaps = 10/308 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR        +++
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 461 MQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           ++  G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A 
Sbjct: 241 LRSTG-VEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAG----AG 295

Query: 520 RLNDASRI 527
           R+ +A+ +
Sbjct: 296 RIEEATYV 303



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 132 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+S+G+  D +
Sbjct: 192 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQI 251

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 252 LFQTMIVXYERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 307

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 367

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 368 DKANDVYMEMQ 378



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L+ E++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++
Sbjct: 61  SLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV--------- 441
            +        ++F  MR  G  P+                     H+  L+         
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 442 --LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           L S      + L   +   YERA  +  A R+++ + +
Sbjct: 241 LRSTGVEIDQILFQTMIVXYERAGLIAHAKRLLHELKR 278



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXYERAGLIAHAKRL 272

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 273 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 331

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           Y+  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 332 YANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381


>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           rehmannii]
          Length = 379

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/379 (79%), Positives = 340/379 (89%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V GDLVLYSNLIEL+RKL DYSKAI+IFSRLK SG  PDLVAYN MINVFGKAKLF+EAR
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVY
Sbjct: 61  SLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQL MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNV
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQK
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           LRSSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEA
Sbjct: 241 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T+VFRQA DAGEVKDI+VF  MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+
Sbjct: 301 TYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNA 360

Query: 445 YGKLREFETADDLYSEMQE 463
           YGKL+ F+ A+D+Y EMQE
Sbjct: 361 YGKLQXFDKANDVYMEMQE 379



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 179/346 (51%), Gaps = 5/346 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 24  AIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLT 83

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 84  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 143

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 263

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 264 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 319

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIE 382
           + MI    +    A+   +  ++R     P    I ++  A G+++
Sbjct: 320 ERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQ 365



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 150/308 (48%), Gaps = 10/308 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +   +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A 
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y
Sbjct: 61  SLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G+   A +L   +R    +PN +   T + +   A    EA  +FR        +++
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 461 MQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           ++  G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A 
Sbjct: 241 LRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AG 295

Query: 520 RLNDASRI 527
           R+ +A+ +
Sbjct: 296 RIEEATYV 303



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +  + + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+
Sbjct: 1   VPGDLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L+ E++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++
Sbjct: 61  SLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDS--------------------HIIALV--------- 441
            +        ++F  MR  G  P+                     H+  L+         
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 180

Query: 442 --LNS----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              NS    YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++
Sbjct: 181 VTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQK 240

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           L S      + L   +   YERA  +  A R+++ + +
Sbjct: 241 LRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 278


>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           duartei]
          Length = 381

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/380 (78%), Positives = 338/380 (88%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
           GDLVLYSNLIEL+RKL DYSKAISIFSRLK  G  PDLVAYN MINVFGKAKLF+EAR L
Sbjct: 2   GDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSL 61

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           I EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQ
Sbjct: 62  IGEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 121

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVT
Sbjct: 122 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 181

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAA LFQKLR
Sbjct: 182 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLR 241

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           SSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+
Sbjct: 242 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 301

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VFRQ  DAGEVKDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YG
Sbjct: 302 VFRQXIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYG 361

Query: 447 KLREFETADDLYSEMQEEGC 466
           KL+EF+ A+D+Y EMQE GC
Sbjct: 362 KLQEFDKANDVYMEMQEVGC 381



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 23  AISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTSYSTLLT 82

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 83  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 142

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 202

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAYERA 262

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 263 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQXIDAGEVKDITVF 318

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 319 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 365



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ 
Sbjct: 4   LVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLIG 63

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y ++G
Sbjct: 64  EMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLG 123

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A +L   +R    +PN +   T + +   A    EA  +FR        +++  + 
Sbjct: 124 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 183

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            M+ ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  
Sbjct: 184 SMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSS 243

Query: 465 GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A R+ +
Sbjct: 244 G-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEE 298

Query: 524 ASRI 527
           A+ +
Sbjct: 299 ATYV 302



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 131 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 190

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 191 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQI 250

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQX 306

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 366

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 367 DKANDVYMEMQ 377



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 111/273 (40%), Gaps = 39/273 (14%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I +  K     +A  +F +L+  G   D V Y  MI  + +  L   A+ L+ E
Sbjct: 5   VLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLIGE 64

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++ +   
Sbjct: 65  MKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 124

Query: 416 YANVIEVFEKMRSAGYFPDS--------------------HIIALV-----------LNS 444
                ++F  MR  G  P+                     H+  L+            NS
Sbjct: 125 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 184

Query: 445 ----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
               YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S  
Sbjct: 185 MMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSG 244

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + L   +   YERA  +  A R+++ + +
Sbjct: 245 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 277



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 272 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQXIDAGEVK-DITVFERMIHLLSKYKK 330

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 331 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 380


>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 352

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/352 (82%), Positives = 320/352 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+RKL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGV+ID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEV
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEV 352



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG   + + +  +
Sbjct: 61  SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 352

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/352 (82%), Positives = 320/352 (90%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R+R ++PDRYTYSTLIT FGKEG+FD+A+SWLQ+MEQDRV GDLVLYSNLIEL+ KL DY
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDY 60

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           SKAISIFSRLK SG +PDLVAYN MINVFGKAKLF+EAR LI EMR  GV P+T SYSTL
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L +YVEN KF+EALSVFAEM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKMGI
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA N
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 240

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+QEMQNRGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID VLYQTMIVAYE
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
           R GLVAHAKRLLHEL++P+ IPR+ AI ILA AGRIEEATWVFRQA DAGEV
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEV 352



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 74/387 (19%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+ + PD  +YSTL+  + +   F  ALS   +M +   P D                 
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD----------------- 43

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                             +V Y+ L+ +  +   + +AI +F  ++R     ++V YN M
Sbjct: 44  ------------------LVLYSNLIELSXKLCDYSKAISIFSRLKRSGFMPDLVAYNAM 85

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I ++GK+    +A +L+ EM+  G+ PN  +YST++ ++ +  K   A  +F ++R    
Sbjct: 86  INVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC 145

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
            +D      MI  Y ++G+   A +L   +R    +PN +   T + +   A    EA  
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +FR                   L  R     NV+  +  M               +  YG
Sbjct: 206 LFR-------------------LMQRKNIEQNVV-TYNSM---------------MMIYG 230

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S      + 
Sbjct: 231 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQV 290

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNK 533
           L+  +   YERA  +  A R+++ + +
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKR 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           + R + P+  TYST+I  +GK G  D A    QK+    V  D VLY  +I    ++   
Sbjct: 1   RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDY 60

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           + A  +   L++    P+ +     I +  +A    EA  +  +   AG + + + +  +
Sbjct: 61  SKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + ++  NKK+   + VF +MR      D     ++++ YG+L   + AD L+  M++ G 
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDAS 525
             +   +  +L +YG  + F     LF RL    NI +  + ++ +  IY +      A+
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLF-RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239

Query: 526 RIMNRMNKR 534
            ++  M  R
Sbjct: 240 NLIQEMQNR 248


>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           hederifolia]
          Length = 364

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/363 (79%), Positives = 325/363 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+EF+ A+D+Y EMQE
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQE 361

Query: 464 EGC 466
            GC
Sbjct: 362 VGC 364



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 6   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   +   ++ T N M+ +YG+    + A+ L 
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 348



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  M+ ++ +  ++    
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKAN 182

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 241

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 285



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 349

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 350 DKANDVYMEMQ 360



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 5   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 64

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 65  TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 124

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 125 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNL 184

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 185 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 244

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 245 AGLVAHAKRLLHELKR 260



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 195 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 254

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 255 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 313

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 314 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 363


>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
 gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
          Length = 546

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/537 (53%), Positives = 401/537 (74%), Gaps = 3/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+ DW+ E+  Y+PS+FAYNVVL+NVLRA+QWELA GL  EM ++ + PD++T+STL
Sbjct: 7   RSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTL 66

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ +G+    + A+ WLQ+ME   +  DLV++S LIELA K+ DYSKA S+FS+LK+SGI
Sbjct: 67  ISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGI 126

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V YN+MIN++GKAK +KEA+ L+ EM+E G+ PDTVSY+ L+N Y E+ K++EA  
Sbjct: 127 APDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQ 186

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVY 239
           VF EM      LD+TTCN+MIDVYG+L+M +DA+ LFWSM K +GI  +VV+YNT+++VY
Sbjct: 187 VFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVY 246

Query: 240 GEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            EAEL  EA ++F  MQ K  +E NV+TYNT++ ++G +L+HEKA  L+++MQ RGIEPN
Sbjct: 247 KEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPN 306

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           A+TYST+I+I+GK GK DRAA LF+ LR  G E+D +LYQ+MIV YER GLVAHAKRLL 
Sbjct: 307 AVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLE 366

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           EL+QP+ +PR+TAI+ILA+A ++EEA  ++ ++ +AGE+K+   +  MI+LF RNK+  N
Sbjct: 367 ELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKN 426

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            I+VFE MR +G+ PDS    ++L +YG+LR+ E A+ LY +M+E GC    +VHFQML 
Sbjct: 427 AIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLK 486

Query: 479 LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           LYG  +     E +F  L  +  ++  EL+  +  IYERA++LN+ASR+ + M  R+
Sbjct: 487 LYGDARKIREAEDMFAALKLE-GLDGDELYLTMIRIYERASKLNEASRLFSEMKSRQ 542


>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
 gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
          Length = 546

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/537 (53%), Positives = 401/537 (74%), Gaps = 3/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+A+ DW+ E+  Y+PS+FAYNVVL+NVLRA+QWELA GL  EM ++ + PD++T+STL
Sbjct: 7   RSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTL 66

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ +G+    + A+ WLQ+ME   +  DLV++S LIELA K+ DYSKA S+FS+LK+SGI
Sbjct: 67  ISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGI 126

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V YN+MIN++GKAK +KEA+ L+ EM+E G+ PDTVSY+ L+N Y E+ K++EA  
Sbjct: 127 APDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQ 186

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVY 239
           VF EM      LD+TTCN+MIDVYG+L+M +DA+ LFWSM K +GI  +VV+YNT+++VY
Sbjct: 187 VFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVY 246

Query: 240 GEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            EAEL  EA ++F  MQ K  +E NV+TYNT++ ++G +L+HEKA  L+++MQ RGIEPN
Sbjct: 247 KEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPN 306

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           A+TYST+I+I+GK GK DRAA LF+ LR  G E+D +LYQ+MIV YER GLVAHAKRLL 
Sbjct: 307 AVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLE 366

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           EL+QP+ +PR+TAI+ILA+A ++EEA  ++ ++ +AGE+K+   +  MI+LF RNK+  N
Sbjct: 367 ELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKN 426

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            I+VFE MR +G+ PDS    ++L +YG+LR+ E A+ LY +M+E GC    +VHFQML 
Sbjct: 427 AIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLK 486

Query: 479 LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           LYG  +     E +F  L  +  ++  EL+  +  IYERA++LN+ASR+ + M  R+
Sbjct: 487 LYGDARKIREAEDMFAALKLE-GLDGDELYLTMIRIYERASKLNEASRLFSEMKSRQ 542


>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
           barbata]
          Length = 364

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/363 (79%), Positives = 324/363 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI L S+ KKY+NV EVF+KMR  GYFPDS++IA+VLN+YGKL EF+ A+D+Y EMQE
Sbjct: 302 ERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQE 361

Query: 464 EGC 466
            GC
Sbjct: 362 VGC 364



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 6   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I ++  A G++ E
Sbjct: 302 ERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXE 348



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  M+ ++ +  ++    
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 241

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 285



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+   F
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEF 349

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 350 DKANDVYMEMQ 360



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 5   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLL 64

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 65  TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 124

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 125 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 184

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 185 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 244

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 245 AGLVAHAKRLLHELKR 260



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 195 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 254

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 255 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 313

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           YS    +F +++  G  PD      ++N +GK   F +A  +  EM+E G
Sbjct: 314 YSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQEVG 363


>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           diamantinensis]
          Length = 363

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 284/363 (78%), Positives = 325/363 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 1   DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 60

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EAL VF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 61  TLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 120

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGE+IHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA
Sbjct: 121 GIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 180

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRS+GVEID +L+QTMIVA
Sbjct: 181 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVA 240

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GL+AHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 241 YERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 300

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+YGKL+EF+ A+D+Y EMQE
Sbjct: 301 ERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQE 360

Query: 464 EGC 466
            GC
Sbjct: 361 VGC 363



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 5   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 64

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+ +FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 65  MYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 124

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F E++ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 125 NVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 184

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 185 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERA 244

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 245 GLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 300

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    A+   +  ++R     P    I ++  A G+++E
Sbjct: 301 ERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQE 347



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 2   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 61

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 62  LLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 121

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    E+  +FR        +++  +  M+ ++ +  ++    
Sbjct: 122 IEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 181

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 182 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTG-VEIDQILFQTMIVA 240

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 241 YERAGLIAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 284



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  +  LF  M+++ I  +  TY++++  +G
Sbjct: 113 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYG 172

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+S+G+  D +
Sbjct: 173 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQI 232

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 233 LFQTMIVAYERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 288

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 289 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 348

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 349 DKANDVYMEMQ 359



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 4   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 63

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 64  TMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 123

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 124 PNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 183

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 184 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYER 243

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 244 AGLIAHAKRLLHELKR 259



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
           P+   Y+ ++    +  + + A  LF ++R  G+  D+  + T+I  + + G+       
Sbjct: 194 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRL 253

Query: 71  ------------DSAISWL--------------QQMEQDRVSGDLVLYSNLIELARKLSD 104
                       D+AI  L              Q ++   V  D+ ++  +I L  K   
Sbjct: 254 LHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVK-DITVFERMIHLLSKYKK 312

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           Y+  + +F +++  G  PD      ++N +GK + F +A  +  EM+E G
Sbjct: 313 YANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 362


>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           cujabensis]
          Length = 359

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 288/358 (80%), Positives = 323/358 (90%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
           GDLVLYSNLIEL+RKL DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR L
Sbjct: 2   GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           I EM+  GV P+T SYSTLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQ
Sbjct: 62  ISEMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 121

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L MAK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVT
Sbjct: 122 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 181

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+MI IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLR
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           SSGVEID +L+QTMIVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+
Sbjct: 242 SSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 301

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           VFRQA DAGEVKDI+VF  MI L S+ KKY+NV+EVF+KMR  GYFPDS++IA+VLN+
Sbjct: 302 VFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNA 359



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 23  AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYSTLLT 82

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 83  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 142

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 202

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 262

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 263 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 318

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
           + MI    +    ++   +  ++R     P    I ++  A
Sbjct: 319 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNA 359



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 149/304 (49%), Gaps = 10/304 (3%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V Y+ L+ +  +   + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ 
Sbjct: 4   LVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIS 63

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+  G+ PN  +YST++ ++ +  K   A  +F ++R     +D      MI  Y ++G
Sbjct: 64  EMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLG 123

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A +L   +R    +PN +   T + +   A    EA  +FR        +++  + 
Sbjct: 124 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 183

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            MI ++ +  ++     + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  
Sbjct: 184 SMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243

Query: 465 GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           G V  DQ+ FQ M+  Y         + L   L    NI +    H++AG    A R+ +
Sbjct: 244 G-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEE 298

Query: 524 ASRI 527
           A+ +
Sbjct: 299 ATYV 302



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 4/222 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 131 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 190

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 191 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 306

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +     D+T    MI +  +     +   +F  MR +G  P
Sbjct: 307 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 348



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 39/273 (14%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I +  K     +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E
Sbjct: 5   VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISE 64

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++     PNT    T +T+     +  EA  VF +  +   + D++    MI+++ +   
Sbjct: 65  MKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 124

Query: 416 YANVIEVFEKMRSAGYFPDS--------------------HIIALV-----------LNS 444
                ++F  MR  G  P+                     H+  L+            NS
Sbjct: 125 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 184

Query: 445 ----YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
               YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S  
Sbjct: 185 MIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + L   +   YERA  +  A R+++ + +
Sbjct: 245 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 277



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+ ++  +IEL  +   Y+  I +F +++ +G+ PD      ++N +GK + F  A  L 
Sbjct: 3   DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           SEM+  G + +   +  +L++Y   K F  LE+L
Sbjct: 63  SEMKTXGVMPNTTSYSTLLTMYVENKKF--LEAL 94


>gi|410110119|gb|AFV61139.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           javanica]
          Length = 379

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/379 (77%), Positives = 333/379 (87%)

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           RKL DYSKAI+IFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  G  P+T
Sbjct: 1   RKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGXMPNT 60

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SYS LL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW 
Sbjct: 61  SSYSXLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 120

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LE
Sbjct: 121 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 180

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           HEKA NL+QEMQ+RGIEPN+I YSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QT
Sbjct: 181 HEKANNLIQEMQSRGIEPNSIXYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 240

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
            IVAYER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKD
Sbjct: 241 XIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 300

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I+VF  MI L S+ KKY NV+EVF+KM   GYFPDS++IA+VLN+YGKL+ F+ A+D+Y 
Sbjct: 301 ITVFERMIHLLSKYKKYXNVVEVFDKMXGXGYFPDSNVIAVVLNAYGKLQXFDKANDVYM 360

Query: 460 EMQEEGCVFSDQVHFQMLS 478
           EMQE GC FSD+VHFQMLS
Sbjct: 361 EMQEVGCXFSDEVHFQMLS 379



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 39/293 (13%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G  PN  +YS 
Sbjct: 6   YSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGXMPNTSSYSX 65

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 66  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 125

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR                   L  R     NV+
Sbjct: 126 IEPNVVSYNTLLRVYGDAELFGEAIHLFR-------------------LMQRKNIEQNVV 166

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
             +  M               +  YGK  E E A++L  EMQ  G   +   +  ++S++
Sbjct: 167 -TYNSM---------------MMIYGKTLEHEKANNLIQEMQSRGIEPNSIXYSTIISIW 210

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           G     +    LF++L S      + L       YERA  +  A R+++ + +
Sbjct: 211 GKVGKLDRAAMLFQKLRSSGVEIDQILFQTXIVAYERAGLVAHAKRLLHELKR 263



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 33/219 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++               
Sbjct: 8   KAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKT-------------- 53

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
                            AG + + S +  ++ ++  NKK+   + VF +MR      D  
Sbjct: 54  -----------------AGXMPNTSSYSXLLTMYVENKKFLEALSVFSEMREIKCLLDLT 96

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              ++++ YG+L   + AD L+  M++ G   +   +  +L +YG  + F     LF RL
Sbjct: 97  TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RL 155

Query: 497 DSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNKR 534
               NI +  + ++ +  IY +      A+ ++  M  R
Sbjct: 156 MQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 194



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 1/115 (0%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           PD     T I      G  + A    +Q        D+ ++  +I L  K   Y   + +
Sbjct: 264 PDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEV 323

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK-PDTVSYSTL 165
           F ++   G  PD      ++N +GK + F +A  +  EM+E G    D V +  L
Sbjct: 324 FDKMXGXGYFPDSNVIAVVLNAYGKLQXFDKANDVYMEMQEVGCXFSDEVHFQML 378


>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
 gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
          Length = 665

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/526 (54%), Positives = 389/526 (73%), Gaps = 13/526 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN++LR+  RA    LA GL  EMR RG+APD ++YSTL+    + G  D A+++L 
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-SSGIVPDLVAYNTMINVFGKA 137
            ME D V+ DLVL+SNLI LA +  D  KA+++FSRL+ ++GI PDL AYN  I  + K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247

Query: 138 KLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLT 195
            L ++A RLL+ +M   GV PD  SYS +L       + + A+S+F  M  V     DL+
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367

Query: 256 QRKE----------IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +             I+ NVVTYNTMI IYGKSLE EKA +L+Q+MQ  GI+PNAITYSTI
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           ++IW KAGKLDRA  LF+KLR +G EIDPVLYQTM+VAYER GLV+ +KRLLH+L+    
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +P+ETAI ILA AGR+EEA W+FR+A DAG+V+D SV+  MI+LF++++++ +VIEVF++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           MR AG  PDS  IA+ +N++GKL+EF+ A  LY  M+EEGCVFSD+VHFQM+SL GA+KD
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F+ LE+L   L  D +I+K+EL+ V AG+YERA + +++S+I++++
Sbjct: 608 FDALEALLGELSDDPSIDKRELYLVAAGVYERACKFDESSQIISQI 653



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 64/400 (16%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V++   +   AR  P +  +N+VL    +      A  LF  MR+ G+AP   TY+T++
Sbjct: 289 AVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTML 348

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             +G  G+F  A+     M      G               SD   ++          I 
Sbjct: 349 RVYGDAGLFGEAVHLFGLMRSAASDG---------------SDRGGSV----------IK 383

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNTMI ++GK+   ++A  L+++M+  G++P+ ++YST+L+++V+  K   A  +
Sbjct: 384 PNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKL 443

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F ++ E    +D      M+  Y +  +   + RL   ++    D   V   T +++   
Sbjct: 444 FEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLK----DSEDVPKETAIKILAN 499

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA  LFR        ++   Y  MI ++ KS  H     +  EM+  G  P++ T
Sbjct: 500 AGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSET 559

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSG------------------------------VE 331
            +  +   GK  + D+AA L++ +R  G                              + 
Sbjct: 560 IAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKDFDALEALLGELS 619

Query: 332 IDPV-----LYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            DP      LY      YER      + +++ ++R PN I
Sbjct: 620 DDPSIDKRELYLVAAGVYERACKFDESSQIISQIRSPNAI 659


>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
          Length = 665

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/526 (54%), Positives = 389/526 (73%), Gaps = 13/526 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN++LR+  RA    LA GL  EMR RG+APD ++YSTL+    + G  D A+++L 
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-SSGIVPDLVAYNTMINVFGKA 137
            ME D V+ DLVL+SNLI LA +  D  KA+++FSRL+ ++GI PDL AYN  I  + K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247

Query: 138 KLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLT 195
            L ++A RLL+ +M   GV PD  SYS +L       + + A+S+F  M  V     DL+
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLS 307

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367

Query: 256 QRKE----------IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +             I+ NVVTYNTMI IYGKSLE EKA +L+Q+MQ  GI+PNAITYSTI
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           ++IW KAGKLDRA  LF+KLR +G EIDPVLYQTM+VAYER GLV+ +KRLLH+L+    
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +P+ETAI ILA AGR+EEA W+FR+A DAG+V+D SV+  MI+LF++++++ +VIEVF++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           MR AG  PDS  IA+ +N++GKL+EF+ A  LY  M+EEGCVFSD+VHFQM+SL GA+KD
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F+ LE+L   L  D +I+K+EL+ V AG+YERA + +++S+I++++
Sbjct: 608 FDALEALLGELSDDPSIDKRELYLVAAGVYERACKFDESSQIISQI 653



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 64/400 (16%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V++   +   AR  P +  +N+VL    +      A  LF  MR+ G+AP   TY+T++
Sbjct: 289 AVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTML 348

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             +G  G+F  A+     M      G               SD   ++          I 
Sbjct: 349 RVYGDAGLFGEAVHLFGLMRSAASDG---------------SDRGGSV----------IK 383

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNTMI ++GK+   ++A  L+++M+  G++P+ ++YST+L+++V+  K   A  +
Sbjct: 384 PNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKL 443

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F ++ E    +D      M+  Y +  +   + RL   ++    D   V   T +++   
Sbjct: 444 FEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLK----DSEDVPKETAIKILAN 499

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA  LFR        ++   Y  MI ++ KS  H     +  EM+  G  P++ T
Sbjct: 500 AGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSET 559

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSG------------------------------VE 331
            +  +   GK  + D+AA L++ +R  G                              + 
Sbjct: 560 IAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKDFDALEALLGELS 619

Query: 332 IDPV-----LYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            DP      LY      YER      + +++ ++R PN I
Sbjct: 620 DDPSIDKRELYLVAAGVYERACKFDESSQIISQIRSPNAI 659


>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
          Length = 677

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 281/531 (52%), Positives = 386/531 (72%), Gaps = 11/531 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN++LR+  RA +  LA GL  EMR+RG+ PD ++YSTL+    + G  D A+++L 
Sbjct: 142 LIPYNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLP 201

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            ME D V+ DL+L+SNLI LA +  D  KA+++FSRL+++GI PDL AYN  +  + K+ 
Sbjct: 202 LMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSD 261

Query: 139 LFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTT 196
           L ++A R+L+ +M   GV PD  +YS +L       + + A+S+F+ M  V     D++ 
Sbjct: 262 LLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISV 321

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM+
Sbjct: 322 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 381

Query: 257 R---------KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
                       ++ NVVTYNTMI IYGKSLE EKA  L+QEMQ  G++P+AITYSTI++
Sbjct: 382 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 441

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           IW KAGKLDRAA LF+KLR +G EIDPVLYQTM+VAYER GLV+ AKRLL +L+ P  IP
Sbjct: 442 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 501

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           +ETAI ILA AGR+EEA W+FR+A + GE+KD SV   M++L+++N+++ NVIEVF++MR
Sbjct: 502 KETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMR 561

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PDS IIA  +N+YGKL+EF+ A  LY  M+E GCVFSD+VHFQM+SL GA+KDF 
Sbjct: 562 KLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLLGAQKDFK 621

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFN 538
            LE L   L  D +I+K+EL+ V AG+YERA + + AS+I++++     F+
Sbjct: 622 ALEVLVGELSHDPSIDKRELYLVAAGVYERAYKFDKASQIISQIRSSNEFD 672


>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
          Length = 665

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 284/526 (53%), Positives = 388/526 (73%), Gaps = 13/526 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN++LR+  R     LA GL  EMR RG+APD ++YSTL+    + G  D A+++L 
Sbjct: 128 LIPYNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-SSGIVPDLVAYNTMINVFGKA 137
            ME D V+ DLVL+SNLI LA +  D  KA+++FSRL+ ++GI PDL AYN  I  + K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247

Query: 138 KLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLT 195
            L ++A RLL+ +M   GV PD  SYS +L       + + A+S+F  M  V     DL+
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367

Query: 256 QRKE----------IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +             I+ NVVTYNTMI IYGKSLE EKA +L+Q+MQ  GI+PNAITYSTI
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           ++IW KAGKLDRA  LF+KLR +G EIDPVLYQTM+VAYER GLV+ +KRLLH+L+    
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +P+ETAI ILA AGR+EEA W+FR+A DAG+V+D SV+  MI+LF++++++ +VIEVF++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           MR AG  PDS  IA+ +N++GKL+EF+ A  LY  M+EEGCVFSD+VHFQM+SL GA+KD
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F+ LE+L   L  D +I+K+EL+ V AG+YERA + +++S+I++++
Sbjct: 608 FDALEALLGELSDDPSIDKRELYLVAAGVYERACKFDESSQIISQI 653



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 64/400 (16%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V++   +   AR  P +  +N+VL    +      A  LF  MR+ G+AP   TY+T++
Sbjct: 289 AVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTML 348

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             +G  G+F  A+     M      G               SD   ++          I 
Sbjct: 349 RVYGDAGLFGEAVHLFGLMRSAASDG---------------SDRGGSV----------IK 383

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNTMI ++GK+   ++A  L+++M+  G++P+ ++YST+L+++V+  K   A  +
Sbjct: 384 PNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKL 443

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F ++ E    +D      M+  Y +  +   + RL   ++    D   V   T +++   
Sbjct: 444 FEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLK----DSEDVPKETAIKILAN 499

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA  LFR        ++   Y  MI ++ KS  H     +  EM+  G  P++ T
Sbjct: 500 AGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSET 559

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSG------------------------------VE 331
            +  +   GK  + D+AA L++ +R  G                              + 
Sbjct: 560 IAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKDFDALEALLGELS 619

Query: 332 IDPV-----LYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            DP      LY      YER      + +++ ++R PN I
Sbjct: 620 DDPSIDKRELYLVAAGVYERACKFDESSQIISQIRSPNAI 659


>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
 gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
          Length = 655

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/528 (53%), Positives = 383/528 (72%), Gaps = 11/528 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN++LR+  RA    LA GL  EMR+RG+ PD ++YSTL+    + G  D A+++L  ME
Sbjct: 123 YNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME 182

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            D V+ DL+L+SNLI LA +  D  KA+++FSRL+++GI PDL AYN  +  + K+ L +
Sbjct: 183 DDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIR 242

Query: 142 EA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNI 199
           +A RLL+ +M   GV PD  +YS +L       + + A+S+F+ M  V     DL+  NI
Sbjct: 243 DAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNI 302

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-- 257
           +++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM+   
Sbjct: 303 ILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSAS 362

Query: 258 -------KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
                    ++ NVVTYNTMI IYGKSLE EKA  L+Q+MQ  G++P+AITYSTI++IW 
Sbjct: 363 DGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWV 422

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KAGKLDRAA LF+KLR +G EIDPVLYQTM+VAYER GLV+ AKRLL +L+ P  IP+ET
Sbjct: 423 KAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKET 482

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           AI ILA AGR+EEA W+FR+A + GE+KD SV   M++L+++N+++ NVIEVF++MR  G
Sbjct: 483 AIKILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLG 542

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PDS  IA  +N+YGKL++F+ A  LY  M+EEGCVFSD+VHFQM+SL GA+KDF  LE
Sbjct: 543 QLPDSETIATAMNAYGKLKDFDKAAALYQAMREEGCVFSDRVHFQMISLLGAQKDFKALE 602

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFN 538
            L   L  D +I+K+EL+ V AG+YERA + + AS I+N++     F+
Sbjct: 603 VLVGELSHDPSIDKRELYLVAAGVYERAYKFDKASHIINQIRSSNEFD 650


>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
           [Burroughsia fastigiata]
          Length = 348

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/347 (79%), Positives = 312/347 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLKSSG  PDLVAYNTMI VFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTL+RVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG EID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+E
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 348



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 180/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  ++  G  PD   Y+T+I  FGK  +F  A S + +M+   V+ +   YS L+ 
Sbjct: 6   AISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TL+ +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 126 NVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++    E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 348



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 156/332 (46%), Gaps = 39/332 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P + AYN ++    +AK +  A  L  EM+  G+ P+  +YSTL+T + +   F  A+
Sbjct: 18  YXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYVENKKFLEAL 77

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   +M + +   DL   + +I++  +L    +A  +F  ++  GI P++V+YNT++ V+
Sbjct: 78  SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLVRVY 137

Query: 135 GKAKLFKEA----RL-------------------------------LIEEMREQGVKPDT 159
           G A+LF EA    RL                               LI+EM+ +G++P++
Sbjct: 138 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNS 197

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++YST+++++ +  K   A  +F ++      +D      MI  Y +  +   A RL   
Sbjct: 198 ITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHE 257

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +++    P  +  +T + +   A    EA ++FR        +++  +  MI +  K  +
Sbjct: 258 LKR----PDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKK 313

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           +     +  +M+  G  P++   + ++  +GK
Sbjct: 314 YSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 140/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++      ++V YNTMI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  MI ++ +  ++    
Sbjct: 123 IEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 182

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G    DQ+ FQ M+  
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEI-DQILFQTMIVA 241

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 285



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 4/238 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN ++R    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG   D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ +
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQ 347



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 116/259 (44%), Gaps = 4/259 (1%)

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           ++ KA ++   +++ G  P+ + Y+T+I ++GKA     A  L  +++++GV  +   Y 
Sbjct: 2   DYSKAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYS 61

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
           T++  Y        A  +  E+R+   +   T   I+     + G  +EA  +F      
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   ++  +  ++ ++   + +   I +F  M+      +      ++  YGK  E E A
Sbjct: 122 GIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 181

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
           ++L  EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 241

Query: 515 YERANRLNDASRIMNRMNK 533
           YERA  +  A R+++ + +
Sbjct: 242 YERAGLVAHAKRLLHELKR 260



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 33/219 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A  +F +L+SSG   D V Y TMI+ + +  L   A+ L+ E++     P  T+     
Sbjct: 5   KAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTS----- 59

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
                                     +  ++ ++  NKK+   + VF +MR      D  
Sbjct: 60  --------------------------YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 93

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              ++++ YG+L   + AD L+  M++ G   +   +  ++ +YG  + F     LF RL
Sbjct: 94  TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLF-RL 152

Query: 497 DSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNKR 534
               NI +  + ++ +  IY +      A+ ++  M  R
Sbjct: 153 MQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSR 191


>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 652

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/525 (53%), Positives = 383/525 (72%), Gaps = 9/525 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN++LR   RA Q  LA GL  EMR RG+A D ++YSTL+    + G  D A+++L  ME
Sbjct: 122 YNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPLME 181

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            D V+ DLVL+SNLI LA +  D  KA+++FSRL+++GI PDL AYN  I  + K+ L +
Sbjct: 182 ADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLR 241

Query: 142 EA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNI 199
           +A RLL+ ++   GV PD  SY+ +L       + + A+S+F+ M  V     DL+  NI
Sbjct: 242 DAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNI 301

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +++ YGQLD+A+DADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM    
Sbjct: 302 VLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTA 361

Query: 260 ------IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                 +  NVVTYNTMI I+GK+LE +KA +L+Q+MQ  GI+PNA+TYST+++IW KAG
Sbjct: 362 SDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAG 421

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TIPRETAI 372
           KLDRAA LF KLR SG E+DPVLYQTM+VAYER GLV+ +KRLL ELR P+  IP+ETA+
Sbjct: 422 KLDRAAKLFDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAIPKETAM 481

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            ILA AGR+EEA W+FR+A   GEVKD SV   M+ LF++N+++ +V+EVF++MR  G+ 
Sbjct: 482 KILASAGRVEEAAWLFRRAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHL 541

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PDS  IA+ +N+YGKL+EF+ A  LY  ++EEGCVFSD+VHFQMLSL GA++DF+ LE L
Sbjct: 542 PDSETIAVTMNAYGKLKEFDKAAGLYRALREEGCVFSDRVHFQMLSLLGAQQDFDALERL 601

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
              L  D +I+K+EL+ V AG+YERA R ++A++I++++     F
Sbjct: 602 VGELSHDPSIDKRELYLVSAGVYERAYRFDEAAQIISQIRSSSDF 646


>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           rugosa]
          Length = 348

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/347 (79%), Positives = 311/347 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGKL+E
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 348



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 6   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+F  ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEE 383
           + MI    +    ++   +  ++R     P    I I+  A G+++E
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQE 348



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  M+ ++ +  ++    
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 241

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 285



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 4/238 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ +
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQ 347



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 5   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLL 64

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 65  TMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 124

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 125 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 184

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 185 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 244

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 245 AGLVAHAKRLLHELKR 260


>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Brachypodium distachyon]
          Length = 652

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/527 (53%), Positives = 383/527 (72%), Gaps = 10/527 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN++LR   RA Q  LA GL  EMR RG+A D ++YSTL+    + G  D A+++L  ME
Sbjct: 121 YNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPLME 180

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            D VS DLVL+SNLI LA +  D  +A+++FSRL+++GI PDL AYN  I  + K+ L +
Sbjct: 181 ADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLR 240

Query: 142 EA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNI 199
           +A RLL+ ++   GV PD  SYS +L       + + A+S+F+ M  V     DL+  NI
Sbjct: 241 DAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNI 300

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---- 255
           +++ YGQLD+A++ADRLFWSMR+ G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM    
Sbjct: 301 VLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSA 360

Query: 256 ---QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
                  ++ NVVTYNT+I I+GKSLE EKA +L+++MQ  GI+PNA+TYSTI++IW KA
Sbjct: 361 SDGNGSSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKA 420

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-NTIPRETA 371
           GKLDRAA LF+KL  SG EIDPVLYQTM+VAYER GLV+ AKRLL EL+ P   IP ETA
Sbjct: 421 GKLDRAAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETA 480

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I+ILA AGR+EEA W+FR+A + GEV+D SV   M++LF++N+++ +V+EVF++MR  G+
Sbjct: 481 ISILANAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGH 540

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PDS  IA  +N+YGKL+EF+ A  LY   +EEGCVFSD+VHFQMLSL GA+KDF  LES
Sbjct: 541 LPDSETIATAMNAYGKLKEFDKAAMLYRASREEGCVFSDRVHFQMLSLLGAQKDFEALES 600

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFN 538
           L   L  D +I+K+EL+ V AG+YERA + ++A++I++++     F 
Sbjct: 601 LVSELSHDPSIDKRELYLVAAGVYERAYKFDEAAQIISQIRSSNDFQ 647


>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           rhodocnemis]
          Length = 345

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 275/344 (79%), Positives = 309/344 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK  G +PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+MI IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSGVEID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA+VLN+YGK
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 6   AISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N MI +YG+    + A+ L 
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
           + MI    +    ++   +  ++R     P    I I+  A
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNA 342



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 10/288 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR        +++  +  MI ++ +  ++    
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 182

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSL 479
            + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVA 241

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           Y         + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 285



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY+++I  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG+  D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 39/256 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  +F +L+  G   D V Y  MI  + +  L   A+ L+ E++     PNT    T +
Sbjct: 5   KAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 64

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T+     +  EA  VF +  +   + D++    MI+++ +        ++F  MR  G  
Sbjct: 65  TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 124

Query: 433 PDS--------------------HIIALV-----------LNS----YGKLREFETADDL 457
           P+                     H+  L+            NS    YGK  E E A++L
Sbjct: 125 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNL 184

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EMQ  G   +   +  ++S++G     +    LF++L S      + L   +   YER
Sbjct: 185 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 244

Query: 518 ANRLNDASRIMNRMNK 533
           A  +  A R+++ + +
Sbjct: 245 AGLVAHAKRLLHELKR 260


>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
 gi|194688764|gb|ACF78466.1| unknown [Zea mays]
          Length = 510

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/505 (53%), Positives = 369/505 (73%), Gaps = 11/505 (2%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           MR+RG+ PD ++YSTL+    + G  D A+++L  ME D V+ DL+L+SNLI LA +  D
Sbjct: 1   MRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGD 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYS 163
             KA+++FSRL+++GI PDL AYN  +  + K+ L ++A R+L+ +M   GV PD  +YS
Sbjct: 61  APKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYS 120

Query: 164 TLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            +L       + + A+S+F+ M  V     D++  NI+++ YGQLD+A++ADRLFWSMR+
Sbjct: 121 PILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRR 180

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR---------KEIEQNVVTYNTMIKI 273
            G+ PSVV+YNT+LRVYG+A LFGEA+HLF LM+            ++ NVVTYNTMI I
Sbjct: 181 AGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITI 240

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           YGKSLE EKA  L+QEMQ  G++P+AITYSTI++IW KAGKLDRAA LF+KLR +G EID
Sbjct: 241 YGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEID 300

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
           PVLYQTM+VAYER GL + AKRLL +L+ P  IP+ETAI ILA AGR+EEA W+FR+A +
Sbjct: 301 PVLYQTMVVAYERAGLASQAKRLLRDLKDPEGIPKETAIKILASAGRLEEAAWLFRRAVN 360

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            GE+KD SV   M++L+++N+++ NVIEVF++MR  G  PDS IIA  +N+YGKL+EF+ 
Sbjct: 361 TGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDK 420

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  LY  M+E GCVFSD+VHFQM+SL GA+KDF  LE L   L  D +I+K+EL+ V AG
Sbjct: 421 AAALYQAMREAGCVFSDRVHFQMISLLGAQKDFKALEVLVGELSHDPSIDKRELYLVAAG 480

Query: 514 IYERANRLNDASRIMNRMNKRRTFN 538
           +YERA + + AS+I++++     F+
Sbjct: 481 VYERAYKFDKASQIISQIRSSNEFD 505



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 32/329 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V++   +   AR  P +  +N++L    +      A  LF  MR+ G+ P   TY+T++
Sbjct: 135 AVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTML 194

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             +G  G+F  A+                   +L +L R  SD +           S + 
Sbjct: 195 RVYGDAGLFGEAV-------------------HLFDLMRSTSDGNGG-------AGSSVK 228

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNTMI ++GK+   ++A  L++EM+  GV+PD ++YST+L+++V+  K   A  +
Sbjct: 229 PNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARL 288

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F ++ E    +D      M+  Y +  +A  A RL   ++    DP  +   T +++   
Sbjct: 289 FEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLK----DPEGIPKETAIKILAS 344

Query: 242 AELFGEAIHLF-RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           A    EA  LF R +   EI+ + V +  M+ +Y K+  H     +  EM+  G  P++ 
Sbjct: 345 AGRLEEAAWLFRRAVNTGEIKDSSV-HRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSE 403

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
             +T +  +GK  + D+AA L+Q +R +G
Sbjct: 404 IIATAMNAYGKLKEFDKAAALYQAMREAG 432



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 39/312 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++    ++ + E A  L  EM+  G+ PD  TYST+++ + K G  D A   
Sbjct: 229 PNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARL 288

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++ +     D VLY  ++    +    S+A  +   LK     P+ +   T I +   
Sbjct: 289 FEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKD----PEGIPKETAIKILAS 344

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   +EA  L       G   D+  +  +++LY +N +    + VF EM ++    D   
Sbjct: 345 AGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEI 404

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
               ++ YG+L     A  L+ +MR+ G                   +F + +H      
Sbjct: 405 IATAMNAYGKLKEFDKAAALYQAMREAGC------------------VFSDRVHF----- 441

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                        MI + G   + +    L+ E+ +         Y     ++ +A K D
Sbjct: 442 ------------QMISLLGAQKDFKALEVLVGELSHDPSIDKRELYLVAAGVYERAYKFD 489

Query: 317 RAAMLFQKLRSS 328
           +A+ +  ++RSS
Sbjct: 490 KASQIISQIRSS 501


>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
           viburnoides]
          Length = 337

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 268/336 (79%), Positives = 300/336 (89%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           DYSKAISIFSRLK SG  PDLVAYN MINVFGKAKLF+EAR LI EM+  GV P+T SYS
Sbjct: 2   DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYS 61

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL +YVEN KF+EALSVF+EM E+ C LDLTTCNIMIDVYGQL MAK+AD+LFW MRKM
Sbjct: 62  TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+M+ IYGK+LEHEKA
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 181

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRSSG EID +L+QTMIVA
Sbjct: 182 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 241

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           YER GLVAHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFRQA DAGEVKDI+VF
Sbjct: 242 YERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
             MI L S+ KKY+NV+EVF+KMR  GYFPDS +IA
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIA 337



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 162/304 (53%), Gaps = 4/304 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F  +++ G  PD   Y+ +I  FGK  +F  A S + +M+   V  +   YS L+ 
Sbjct: 6   AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLT 65

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  +   + +A+S+FS ++    + DL   N MI+V+G+  + KEA  L   MR+ G++P
Sbjct: 66  MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 125

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M+ +YG+    + A+ L 
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 185

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++    E + + + TMI  Y ++
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERA 245

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                A  L+ E++     P+ I   T I I   AG+++ A  +F++   +G   D  ++
Sbjct: 246 GLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 301

Query: 338 QTMI 341
           + MI
Sbjct: 302 ERMI 305



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 39/293 (13%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + +AI +F  ++R     ++V YN MI ++GK+    +A +L+ EM+  G+ PN  +YST
Sbjct: 3   YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYST 62

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++ ++ +  K   A  +F ++R     +D      MI  Y ++G+   A +L   +R   
Sbjct: 63  LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +PN +   T + +   A    EA  +FR                   L  R     NV+
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFR-------------------LMQRKNIEQNVV 163

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
             +  M               +  YGK  E E A++L  EMQ  G   +   +  ++S++
Sbjct: 164 -TYNSM---------------MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIW 207

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           G     +    LF++L S      + L   +   YERA  +  A R+++ + +
Sbjct: 208 GKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKR 260



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 4/222 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 114 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 173

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+SSG   D +
Sbjct: 174 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 233

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 289

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +     D+T    MI +  +     +   +F  MR +G  P
Sbjct: 290 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 331



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 33/219 (15%)

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A  +F +L+ SG   D V Y  MI  + +  L   A+ L+ E++    +P         
Sbjct: 5   KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMP--------- 55

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
                                 + + +  ++ ++  NKK+   + VF +MR      D  
Sbjct: 56  ----------------------NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 93

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              ++++ YG+L   + AD L+  M++ G   +   +  +L +YG  + F     LF RL
Sbjct: 94  TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF-RL 152

Query: 497 DSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRMNKR 534
               NI +  + ++ +  IY +      A+ ++  M  R
Sbjct: 153 MQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 191


>gi|410110121|gb|AFV61140.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
           lupulina]
          Length = 257

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/257 (78%), Positives = 236/257 (91%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           AK+AD+LFW MRKMGI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYN+
Sbjct: 1   AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 60

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M+ IYGK+LEHEKA NL+QEMQ+RGIEPN+ITYSTII+IWGK GKLDRAAMLFQKLRS+G
Sbjct: 61  MMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTG 120

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
           VEID +L+QTMIVAYER GL+AHAKRLLHEL++P+ IPR+TAI ILA AGRIEEAT+VFR
Sbjct: 121 VEIDQILFQTMIVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFR 180

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           QA DAGEVKDI+VF  MI L S+ KKYANV+EVF+KMR  GYFPDS++IA+VLN+YGKL+
Sbjct: 181 QAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQ 240

Query: 450 EFETADDLYSEMQEEGC 466
           EF+ A+D+Y EMQE GC
Sbjct: 241 EFDKANDVYMEMQEVGC 257



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 126/244 (51%), Gaps = 5/244 (2%)

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           KEA  L   MR+ G++P+ VSY+TLL +Y +   F EA+ +F  M   N   ++ T N M
Sbjct: 2   KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 61

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           + +YG+    + A+ L   M+  GI+P+ ++Y+T++ ++G+      A  LF+ ++   +
Sbjct: 62  MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGV 121

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E + + + TMI  Y ++     A  L+ E++     P+ I   T I I   AG+++ A  
Sbjct: 122 EIDQILFQTMIVAYERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATY 177

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-G 379
           +F++   +G   D  +++ MI    +    A+   +  ++R     P    I ++  A G
Sbjct: 178 VFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYG 237

Query: 380 RIEE 383
           +++E
Sbjct: 238 KLQE 241



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   +    P+V +YN +LR    A+ +  A  LF  M+++ I  +  TY++++  +G
Sbjct: 7   LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 66

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A + +Q+M+   +  + + YS +I +  K+    +A  +F +L+S+G+  D +
Sbjct: 67  KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQI 126

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            + TMI  + +A L   A+ L+ E++    +PD +   T +++     +  EA  VF + 
Sbjct: 127 LFQTMIVAYERAGLIAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQA 182

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D+T    MI +  +     +   +F  MR +G  P       +L  YG+ + F
Sbjct: 183 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 242

Query: 246 GEAIHLFRLMQ 256
            +A  ++  MQ
Sbjct: 243 DKANDVYMEMQ 253



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 133/292 (45%), Gaps = 39/292 (13%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LF  MR+ GI P+  +Y+TL+  +G   +F  AI   + M++  +  ++V Y++++ 
Sbjct: 4   ADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMM 63

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           +  K  ++ KA ++   ++S GI P+ + Y+T+I+++GK      A +L +++R  GV+ 
Sbjct: 64  IYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEI 123

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D + + T                                   MI  Y +  +   A RL 
Sbjct: 124 DQILFQT-----------------------------------MIVAYERAGLIAHAKRLL 148

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             +++    P  +  +T + +   A    EA ++FR        +++  +  MI +  K 
Sbjct: 149 HELKR----PDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKY 204

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
            ++     +  +M+  G  P++   + ++  +GK  + D+A  ++ +++  G
Sbjct: 205 KKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 256



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 31/204 (15%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YN ++    +  + E A+ L  EM+ RGI P+  TYST+I+ +GK G  D A    
Sbjct: 54  NVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLF 113

Query: 78  QQMEQDRVSGDLVLY---------SNLIELARKL----------------------SDYS 106
           Q++    V  D +L+         + LI  A++L                          
Sbjct: 114 QKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIE 173

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  +F +   +G V D+  +  MI++  K K +     + ++MR  G  PD+   + +L
Sbjct: 174 EATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVL 233

Query: 167 NLYVENHKFVEALSVFAEMNEVNC 190
           N Y +  +F +A  V+ EM EV C
Sbjct: 234 NAYGKLQEFDKANDVYMEMQEVGC 257



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 6/167 (3%)

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +PN +   T + +   A    EA  +FR        +++  +  M+ ++ +  ++     
Sbjct: 17  EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 76

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLY 480
           + ++M+S G  P+S   + +++ +GK+ + + A  L+ +++  G V  DQ+ FQ M+  Y
Sbjct: 77  LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTG-VEIDQILFQTMIVAY 135

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
                    + L   L    NI +    H++AG    A R+ +A+ +
Sbjct: 136 ERAGLIAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYV 178



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 66/152 (43%)

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +EA  +F      G   ++  +  ++ ++   + +   I +F  M+      +      +
Sbjct: 2   KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 61

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +  YGK  E E A++L  EMQ  G   +   +  ++S++G     +    LF++L S   
Sbjct: 62  MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGV 121

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              + L   +   YERA  +  A R+++ + +
Sbjct: 122 EIDQILFQTMIVAYERAGLIAHAKRLLHELKR 153


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 247/466 (53%), Gaps = 5/466 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A+++P V +Y+ ++ ++ RA +WE A  +  EM+ +G  P+ +TY+TL+ C GK G FD 
Sbjct: 38  AKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDE 97

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L +M  +    D+  Y+ LI    K    S+A ++F+ ++  G VPD   YN++I 
Sbjct: 98  ALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIY 157

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GK    ++A  L+EEM   G  PD ++YS+L+    ++ + V+A  +F EM       
Sbjct: 158 GLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKP 217

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T   ++D  G+     DA  L   M++ G+ P VV+YN L+  +G+     EA +L 
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+R   + +VVTY+ +I    K+ + ++A  ++++M+  G  P+ ITY+T+I   GKA
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA 337

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           G L+ A  LF +++S G   D V Y T+I A  +   V  A  L  E+     QP+    
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + IT+L +AG++++A  +F +    G   D+  +   +    R  ++    ++FE M+ 
Sbjct: 398 CSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           +G  PD      +L    K +E + A  L  E+ E+GC F D + F
Sbjct: 458 SGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAF-DSLKF 502



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 235/454 (51%), Gaps = 4/454 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  YN +L  + +A Q E A  LF+E++     PD  +YS LI   G+ G +++A+ 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            + +M+      +L  Y+ L++   K   + +A+ + + ++ +G VPD+  YN +I+  G
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA    EA  L  EMRE+G  PDT +Y++L+    +  +  +A+ +  EM    CP D+ 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +I   G+      A +LF  M++ G  P  +++  L+   G+A    +A+ L   M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + + ++  VVTYN +I  +GK  +  +A NL+ EM+  G +P+ +TYS +I    KA +L
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A  + +K+   G   D + Y T+I    + GL+  A RL   ++     P+ +   T 
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           IT L +A R+E A  +F +    G   D+  +  +I +  +  +  +   +F +MR  G 
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD       LNS G+   F+ A  ++ +M+E G
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 246/509 (48%), Gaps = 42/509 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +A +   A  LF EMR+RG  PD +TY++LI   GK G    A+  
Sbjct: 112 PDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL 171

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     D++ YS+LI    K  +  KA  +F  +K  G  PD + +  +++  GK
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    +A  L++EM+E+GVKP  V+Y+ L+  + +    VEA ++  EM    C  D+ T
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I    +     +A ++   M K G  P  ++YNTL+   G+A L  +A  LF  M+
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K    +VVTY+T+I   GK+   E A  L +EM++ GI+P+  TY +II + GKAG++D
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-------- 368
            A  LF ++R  G+  D + Y   + +  R G    A+++  ++++   +P         
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471

Query: 369 -------------------------------ETAITILARAGRIEEATWVFRQAFDAGEV 397
                                          +  + IL   G ++EA  + + A   G  
Sbjct: 472 LGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW 531

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
              S +  +I+  ++  + +      E ++  G  PD    + ++++ G+  + +TA +L
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFEL 591

Query: 458 YSEMQEEGCVFSDQVHFQM---LSLYGAR 483
             EM + G   S + +  +   L  +GAR
Sbjct: 592 LEEMSKRGLKLSPRSYSNLVRKLQDWGAR 620



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 177/387 (45%), Gaps = 40/387 (10%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +LD + E     P V  YN ++    +      A+ L DEM++ G  PD  TYS LI
Sbjct: 238 ALELLDEMKERG-VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           T   K    D A   L++ME++    D + Y+ LI    K    + A  +F R+KS G  
Sbjct: 297 TGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN 356

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V Y+T+I   GKA   + A +L EEM   G++PD  +Y                   
Sbjct: 357 PDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY------------------- 397

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
                          C+I I V G+     DADRLF  MR  G+ P V++YN  L   G 
Sbjct: 398 ---------------CSI-ITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              F EA  +F  M+   +  +V TY+ ++    K+ E + A  L++E+  +G   +++ 
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           +   + I    G +D A  L Q   S G+      Y  +I A  + G V+ A   L +L+
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561

Query: 362 Q----PNTIPRETAITILARAGRIEEA 384
           +    P+ +   + I+ L + G+I+ A
Sbjct: 562 EQGGKPDIVSYSSLISALGQTGQIDTA 588



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 41/294 (13%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y+ ++  + +A + E A  LF+EM   GI PD +TY ++IT  GK G  D A  
Sbjct: 356 NPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA-- 413

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                  DR                          +FS ++  G+ PD++ YN  +N  G
Sbjct: 414 -------DR--------------------------LFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD-- 193
           +   FKEAR + E+M+E G+ PD  +Y  LL    +  +  +A  +  E+ E  C  D  
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500

Query: 194 -LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
               C  ++  +G +D   +A  L       G+ P   SYN L+    +A    EA +  
Sbjct: 501 KFDECLEILTSWGNVD---EAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTL 557

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
             ++ +  + ++V+Y+++I   G++ + + A  L++EM  RG++ +  +YS ++
Sbjct: 558 EDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 99/227 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P +F Y  ++  + +A Q + A  LF EMR +G++PD  TY+  +   G+ G F
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRF 445

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    + M++  +  D+  Y  L+    K  +   A  +   L   G   D + ++  
Sbjct: 446 KEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDEC 505

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + +        EA  L++    +G+ P   SY+ L++   +  +  EA +   ++ E   
Sbjct: 506 LEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGG 565

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
             D+ + + +I   GQ      A  L   M K G+  S  SY+ L+R
Sbjct: 566 KPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%)

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +   + +  LA+AG+ EEA  +F +   A    D+  + C+I    R  K+   +EV
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M++ G  P+      +++  GK  +F+ A  L +EM++ GCV   + +  ++S  G 
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 483 RKDFNMLESLFERL 496
               +   +LF  +
Sbjct: 127 AGRLSEAFTLFAEM 140


>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 232/464 (50%), Gaps = 4/464 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  Y +V++  +   +++ A   F +M+  G  PD   Y+ LI  +GK G F  A+ 
Sbjct: 56  PPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMK 115

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +  Q++ + +  D   Y  ++   RK+ +  K       ++ +GI PD VAY+ +I++FG
Sbjct: 116 YFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFG 175

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   ++A     E++  G  PD+V+Y+TL++ + +     +A  VF E     C  D  
Sbjct: 176 KAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPV 235

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               MI VY +  MA  A  +   M+++G+ P+ + Y ++L  +  A     AI LF  M
Sbjct: 236 IFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEM 295

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           Q         TY TM+ +Y K+  H  A  L+ +M+  G   N + YST+I ++GK GKL
Sbjct: 296 QESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKL 355

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             A  LF  ++  G + + ++Y TM+  Y + G +  A+RL+ EL+     P+T+   T 
Sbjct: 356 QEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTL 415

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R GR EE   VF Q    G   D  +   MI ++ + ++Y+ + E+ E M  +G 
Sbjct: 416 INAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGI 475

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
            PD+ I+  V+  Y      E A +L  ++ E G +  + +H Q
Sbjct: 476 QPDTRILKTVVEIYEDGGMCENAAELLRKINELGPLEGNTLHKQ 519



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/536 (23%), Positives = 249/536 (46%), Gaps = 39/536 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           SV    W+  +  + P    Y      ++R ++W     L DEM  +   PD   Y+ +I
Sbjct: 7   SVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVI 66

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G F +A  W  +M+      D+V+Y+ LI    K  ++S+A+  FS+LK  G++
Sbjct: 67  KEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLL 126

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD   Y  +++   K     +    ++EMRE G+KPD V+YS                  
Sbjct: 127 PDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYS------------------ 168

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
                            I+ID++G+    +DA   F  ++  G  P  V+YNTL+  + +
Sbjct: 169 -----------------ILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAK 211

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
             +  +A  +F+  QR     + V + TMI++Y K+   ++A ++++ M+  G++PN + 
Sbjct: 212 VGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELG 271

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y +++  + +A +   A  LF++++ S        Y TM+  Y + G  + A+ LL ++R
Sbjct: 272 YGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMR 331

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           Q     N +   T I +  + G+++EAT +F      G   ++ V+  M++++ +  +  
Sbjct: 332 QLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRIN 391

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   +  +++ +   PD+     ++N+Y +L  FE    ++ + + +G      +   M+
Sbjct: 392 DAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMI 451

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           ++YG  + ++ L  L E +          +   V  IYE      +A+ ++ ++N+
Sbjct: 452 NVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINE 507



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 1   RSVAILDWINE------EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDR 54
           R V  +D  NE      EA   P   AY++++    +A + E A   F E++  G  PD 
Sbjct: 140 RKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDS 199

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
             Y+TLI  F K GM D A    ++ ++     D V++  +I++  K     +A+ +   
Sbjct: 200 VAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKL 259

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +K  G+ P+ + Y +++N F +A     A  L EEM+E   +    +Y T+LN+Y +   
Sbjct: 260 MKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGF 319

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              A  + A+M ++    ++   + +ID+YG++   ++A RLF +M++ G   +++ YNT
Sbjct: 320 HSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNT 379

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           +L +YG+A    +A  L   ++  ++  + VTY T+I  Y +    E+   + ++ +  G
Sbjct: 380 MLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADG 439

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           ++ + I  + +I ++GKA +  + A L + +  SG++ D  + +T++  YE  G+  +A 
Sbjct: 440 LKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAA 499

Query: 355 RLLHELRQ 362
            LL ++ +
Sbjct: 500 ELLRKINE 507


>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 779

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 245/516 (47%), Gaps = 6/516 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           ++++ R   +   W+ A  LF  M R +   P+ + Y+ +I   G+EGM D A    + M
Sbjct: 41  FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             + V  ++  ++ LI    +   +  ++ + +R+K   + P+L+ YNT+IN   K  L 
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLE 160

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  +MR +G++PD ++Y+TLL+         EA  VF  MNE     D  T N 
Sbjct: 161 WEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNA 220

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++D+YGQ D  +    L   M + G  P VV+YN L+  YG A  +  A  +F+ MQ   
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAG 280

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +VVT++T+++ YGK   +++   L  +M+ RG EP+  TY+T+I ++G+ G    + 
Sbjct: 281 CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESI 340

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITIL 375
            LF  L   GVE D   Y  ++ +  + GL   AK++   + Q    P        IT  
Sbjct: 341 NLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAY 400

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             A    EAT+ F    ++G   D+  +  +I   +    Y      +  M   G   D 
Sbjct: 401 GNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADV 460

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                ++ ++G+   F+ A +   +M+E  C  +   +  ++ +Y     F+  ++ F  
Sbjct: 461 STYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLD 520

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L     +   + + ++  +  R NR +DAS+++  M
Sbjct: 521 LQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 246/503 (48%), Gaps = 8/503 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y +++  + R    + A  LF++M    +  + Y+++ LI  +G+ G  ++++  
Sbjct: 72  PNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHL 131

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L +M++++V+ +L+ Y+ +I    K   ++   + +F++++  GI PD++ YNT+++   
Sbjct: 132 LARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACS 191

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
              L +EA ++   M E GV PD+++Y+ L+++Y +  +      +  EM +     D+ 
Sbjct: 192 SRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVV 251

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I+ YG+    + A ++F  M++ G  P VV+++TLL  YG+   + E   LF  M
Sbjct: 252 AYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDM 311

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + +  E +V TYNT+I+++G+    +++ NL  ++ + G+EP+  TY+ ++   GK G  
Sbjct: 312 KERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLH 371

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
             A  + + +  S V      +  +I AY    L + A    + +++    P        
Sbjct: 372 KAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNAL 431

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I   A  G   EA   +    D G   D+S +  +IE F R   + + IE    M  A  
Sbjct: 432 IGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARC 491

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P+ H    ++  Y     F+ A   + ++Q  G + S   +  +LS+   R  ++    
Sbjct: 492 SPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASK 551

Query: 492 LFERLDSDSNINKKELHHVVAGI 514
           + E +      N   ++ VV GI
Sbjct: 552 VLEEM---LEPNMPSIYGVVGGI 571



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 201/418 (48%), Gaps = 5/418 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           + +P++  YN V+    +   +WE   GLF +MR  GI PD  TY+TL++     G+ + 
Sbjct: 139 KVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEE 198

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    + M +  V  D + Y+ L+++  +   +     +   ++ +G  PD+VAYN +I 
Sbjct: 199 AGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIE 258

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +G+A  ++ A  + ++M+E G  PD V++STLL  Y ++  + E   +F +M E     
Sbjct: 259 AYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEP 318

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T N +I V+GQ    +++  LFW +   G++P + +Y  LL   G+  L   A  + 
Sbjct: 319 DVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIH 378

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M +  +      +  +I  YG +  + +AT     M+  G +P+  TY+ +I      
Sbjct: 379 RHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGG 438

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA---KRLLHELR-QPNTIPR 368
           G    A   +  +   G+  D   Y ++I A+ R GL   A    R + E R  PN    
Sbjct: 439 GLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTY 498

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           E  + +   AG  +EA   F      GE+  +  +  ++ + +R  ++ +  +V E+M
Sbjct: 499 EALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 183/394 (46%), Gaps = 7/394 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA   P    YN ++    +A + E    L  EM Q G APD   Y+ LI  +G+ G + 
Sbjct: 208 EAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYR 267

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A    +QM++   + D+V +S L+E   K   Y +   +F+ +K  G  PD+  YNT+I
Sbjct: 268 AAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLI 327

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVN 189
            VFG+   F+E+  L  ++ + GV+PD  +Y+ LL    +   HK  + +      + V 
Sbjct: 328 QVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVT 387

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D  T   +I  YG   +  +A   F SM++ G  P + +YN L+  +    L+ EA 
Sbjct: 388 PTTDGFTG--LITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAG 445

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             +  M  + I  +V TYN++I+ +G+    + A    ++M+     PN  TY  ++ ++
Sbjct: 446 SAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVY 505

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
             AG  D A   F  L+  G       Y  ++    R      A ++L E+ +PN +P  
Sbjct: 506 CTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPN-MPSI 564

Query: 370 TAITILARAGRIEEAT-WV-FRQAFDAGEVKDIS 401
             +      G +++ T W     AFD  +V  + 
Sbjct: 565 YGVVGGILKGEMDDGTNWQRVEYAFDGLKVDGVG 598



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 154/315 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+A  +P V AYN+++    RA ++  A  +F +M++ G  PD  T+STL+  +GK G +
Sbjct: 242 EQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCY 301

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D        M++     D+  Y+ LI++  +   + ++I++F  L   G+ PD+  Y  +
Sbjct: 302 DEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGL 361

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +   GK  L K A+ +   M +  V P T  ++ L+  Y     + EA   F  M E  C
Sbjct: 362 LYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGC 421

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL T N +I  +    +  +A   + +M   GI   V +YN+L+  +G   LF +AI 
Sbjct: 422 KPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIE 481

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             R M+      N  TY  ++ +Y  +   ++A     ++Q  G  P+  +Y  ++++  
Sbjct: 482 FSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCA 541

Query: 311 KAGKLDRAAMLFQKL 325
           +  + D A+ + +++
Sbjct: 542 RRNRWDDASKVLEEM 556



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 5/224 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   +  ++     A  +  A   F+ M++ G  PD  TY+ LI      G++  A S
Sbjct: 387 TPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGS 446

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M  + +S D+  Y++LIE   +   +  AI     ++ +   P+   Y  ++ V+ 
Sbjct: 447 AYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYC 506

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A LF EA+    +++  G  P   SY  LL++    +++ +A  V  EM E N P    
Sbjct: 507 TAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYG 566

Query: 196 TCNIMIDVYGQLDMAKDADRL---FWSMRKMGIDPSVVSYNTLL 236
               ++   G++D   +  R+   F  ++  G+  ++  YN LL
Sbjct: 567 VVGGILK--GEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALL 608



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 48/298 (16%)

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSL---------EHEKATNLMQEMQ-NRGIEPNA 299
           +L  L  R  I + +  Y   + I   SL         + +KA  L + MQ ++  +PN 
Sbjct: 15  NLTSLAPRGSIAKTMEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNE 74

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+ +I I G+ G LD+A+ LF+ +  + VE +   +  +I AY R G    +  LL  
Sbjct: 75  HVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLAR 134

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +++    PN I   T I   A+ G                                   +
Sbjct: 135 MKREKVTPNLITYNTVINACAKGGL----------------------------------E 160

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +  ++ +F +MR  G  PD      +L++       E A  ++  M E G V     +  
Sbjct: 161 WEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNA 220

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           ++ +YG       +  L   ++   N      ++++   Y RA +   A+++  +M +
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQE 278


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 240/446 (53%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +N ++  +    +   A  L D+M QRG  PD  TY  ++
Sbjct: 169 AVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A+S L++ME+ ++  D+V+Y+ +I+   K      A ++F+++++ GI 
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIR 287

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+  YN++I+       + +A  L+  M E+ + P+ V++S L++ +V+  K VEA  +
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +   D+ T + +I+ +   D   +A  +F  M      P+VV+YNTL++ + +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + LFR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ IT
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++    K GKL++A ++F+ L+ S +E D   Y  MI    + G V     L   L 
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN I   T I+   R G  EEA  +FR+  + G + D   +  +I    R+   A
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 587

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+ ++MRS G+  D+  I++V+N
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 232/495 (46%), Gaps = 4/495 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  + + K+++L   L + M+   I+ D Y+Y+ LI CF +     
Sbjct: 73  QSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  S+L+         S A+++  ++   G  PD V +NT+I
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLI 192

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  L+++M ++G +PD V+Y  ++N   +      ALS+  +M +    
Sbjct: 193 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE 252

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+   N +ID   +     DA  LF  M   GI P V +YN+L+        + +A  L
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  NVVT++ +I  + K  +  +A  L  EM  R I+P+  TYS++I  +  
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F+ + S     + V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +AG  + A  +F++    G   DI  +  +++   +  K    + VFE ++
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +   PD +   +++    K  + E   DL+  +  +G   +  ++  M+S +  +    
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552

Query: 488 MLESLFERLDSDSNI 502
             ++LF  +  D  +
Sbjct: 553 EADALFREMKEDGTL 567



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 10/444 (2%)

Query: 27  RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
           RN L   + + A GLF EM Q    P    ++ L++   K   FD  IS  ++M+  R+S
Sbjct: 53  RNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRIS 112

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
            DL  Y+ LI    + S    A+++  ++   G  PD+V  ++++N +  +K   +A  L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 172

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY-- 204
           +++M E G KPDTV+++TL++    ++K  EA+++  +M +  C  DL T   +++    
Sbjct: 173 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCK 232

Query: 205 -GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
            G +D+A     L   M K  I+  VV YNT++    + +   +A  LF  M+ K I  +
Sbjct: 233 RGDIDLALS---LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V TYN++I           A+ L+  M  R I PN +T+S +I  + K GKL  A  L+ 
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG 379
           ++    ++ D   Y ++I  +     +  AK +   +      PN +   T I    +A 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           R+EE   +FR+    G V +   +  +I+   +        ++F+KM S G  PD    +
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 440 LVLNSYGKLREFETADDLYSEMQE 463
           ++L+   K  + E A  ++  +Q+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQK 493



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ ++++  P ++ YN+++  + +A + E    LF  +  +G+ P+   Y+T+
Sbjct: 483 KALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G+ + A +  ++M++D    D   Y+ LI    +  D + +  +   ++S G 
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 601

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D    + +IN+    +L K
Sbjct: 602 VGDASTISMVINMLHDGRLEK 622


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 240/446 (53%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +N ++  +    +   A  L D M  RG  PD +TY T++
Sbjct: 170 AVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A+S L++ME+ ++  ++V+Y+ +I+   K      A  +F+++++ GI 
Sbjct: 229 NGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 288

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+  YN++I+       + +A  L+ +M E+ + P+ V++++L++ + +  K +EA  +
Sbjct: 289 PDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F EM + +   ++ T N +I+ +   D   +A ++F  M      P VV+YNTL++ + +
Sbjct: 349 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCK 408

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + LFR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ IT
Sbjct: 409 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 468

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++    K GKL++A ++F+ L+ S +E +   Y  MI    + G V     L   L 
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN I   T I+   R G  EEA  +FR+  + G + D   +  +I    R+   A
Sbjct: 529 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+ ++MRS G+  D+  I++V+N
Sbjct: 589 ASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 232/495 (46%), Gaps = 4/495 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ +L  + +  ++++   L ++M+  GI  + YTYS L+ CF +     
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLP 133

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  S+L+         S+A+++  ++   G  PD V +NT+I
Sbjct: 134 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLI 193

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  LI+ M  +G +PD  +Y T++N   +      ALS+  +M +    
Sbjct: 194 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 253

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   N +ID   +     DA  LF  M   GI P V +YN+L+        + +A  L
Sbjct: 254 ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRL 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  NVVT+N++I  + K  +  +A  L  EM  R I+PN +TY+++I  +  
Sbjct: 314 LSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 373

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F  + S     D V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +AG  + A  +F++    G   DI  +  +++   +  K    + VFE ++
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +   P+ +   +++    K  + E   DL+  +  +G   +  ++  M+S +  +    
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553

Query: 488 MLESLFERLDSDSNI 502
             ++LF  +  D  +
Sbjct: 554 EADALFREMKEDGTL 568



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ ++++  P+++ YN+++  + +A + E    LF  +  +G+ P+   Y+T+
Sbjct: 484 KALVVFEYL-QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 542

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G+ + A +  ++M++D    D   Y+ LI    +  D + +  +   ++S G 
Sbjct: 543 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 602

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D    + +IN+    +L K
Sbjct: 603 VGDASTISMVINMLHDGRLEK 623


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 244/483 (50%), Gaps = 15/483 (3%)

Query: 11  EEARYSPSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           +EA   PS+  YNV++     + + WE    LF+EM+ +GI PD YTY+T IT      +
Sbjct: 144 KEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSL 203

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A     QM+    + D V Y+ L+++  K   Y++A ++   ++S+G +P++V YN 
Sbjct: 204 CEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNE 263

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++ FG+A L   A  + + M  +G++PD  +Y++LL+ Y    K  +A+ ++ +M   N
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  +  T N +I ++G+     +   +F  M+  G++P +V++N+LL  +G+  ++ E +
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +FR M++   E +  T+N +I+ YG+    ++A ++   M   G  P+  T++T++A  
Sbjct: 384 KVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAAL 443

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL---LHELRQPNT- 365
            + G+ + A ++  +L  S  + + + Y +M+ AY   G +   K +   LH +  P T 
Sbjct: 444 AREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTK 503

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I  +T + + ++   ++EA   F      G + D S F  MI ++ +        + F  
Sbjct: 504 ILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFAL 563

Query: 426 MRSAGYFPDSHIIALVLNSYGK----------LREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +RS G  PD      ++  YG+          LRE   A      +     +FS   H Q
Sbjct: 564 LRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQ 623

Query: 476 MLS 478
           + S
Sbjct: 624 LSS 626



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 242/524 (46%), Gaps = 9/524 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +W+ +   + P      V+LR + R  Q      LF  +R+ G   D Y Y++L
Sbjct: 64  KALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSL 123

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL-ARKLSDYSKAISIFSRLKSSG 119
           I+   +   F  A+ + +QM++      LV Y+ +I+L  +K   +   + +F  +K+ G
Sbjct: 124 ISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQG 183

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD   YNT I       L +EA  L  +M+     PD V+Y+ LL++Y +   + EA 
Sbjct: 184 IQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAA 243

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           +V  EM    C  ++ T N ++  +G+  +   A  +  SM   GI+P V +Y +LL  Y
Sbjct: 244 NVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAY 303

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             A    +A+ ++  M+      N  T+N +I ++GK+    +   + ++MQ  G+EP+ 
Sbjct: 304 SRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDI 363

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +T+++++  +GK G       +F+ ++ +G E D   +  +I AY R G    A  +   
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + Q    P      T +  LAR GR E A  +  +   +    +   +  M+  ++   +
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGE 483

Query: 416 YANVIEVFEKMRSAGYFPDSHII--ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
              + E+ + + +  Y P + I+    VL  Y K    + A+D +  M+  G +      
Sbjct: 484 LEKLKEMVDTLHTI-YVPFTKILLKTFVL-VYSKCSLVDEAEDAFLAMRHHGYLSDTSTF 541

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             M+S+YG +   +     F  L S         ++ + G+Y R
Sbjct: 542 NAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGR 585



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 194/394 (49%), Gaps = 10/394 (2%)

Query: 93  SNLIELARKLS---DYSKAISIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           S L+ + + L     ++KA+ +F+ ++ S    PD V    M+ + G+         L +
Sbjct: 47  SELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFK 106

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +RE+G   D  +Y++L++    N KF EAL  F +M E      L T N++ID+YG+  
Sbjct: 107 SLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKG 166

Query: 209 MA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
            + ++   LF  M+  GI P   +YNT +       L  EA  LF  M+      + VTY
Sbjct: 167 RSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTY 226

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N ++ +YGK+  + +A N+++EM++ G  PN +TY+ +++ +G+AG  + AA +   + S
Sbjct: 227 NALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVS 286

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEE 383
            G+E D   Y +++ AY R G V  A  + +++R  N  P       L     +     E
Sbjct: 287 KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSE 346

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              +F      G   DI  +  ++  F +N  Y+ V++VF  M+ AG+ PD     +++ 
Sbjct: 347 MMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIE 406

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +YG+    + A  +Y  M + GC   D   F  L
Sbjct: 407 AYGRCGSSDQALSIYDGMLQAGCT-PDLATFNTL 439



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 187/378 (49%), Gaps = 4/378 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+ F +N ++    + K +     +F++M+  G+ PD  T+++L+  FGK GM+   + 
Sbjct: 325 TPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLK 384

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M++     D   ++ LIE   +     +A+SI+  +  +G  PDL  +NT++    
Sbjct: 385 VFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALA 444

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   ++ A L+++E+     KP+ ++Y+++L+ Y    +  +   +   ++ +  P    
Sbjct: 445 REGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKI 504

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                + VY +  +  +A+  F +MR  G      ++N ++ +YG+  +  +A   F L+
Sbjct: 505 LLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALL 564

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +E +VVTYN ++ +YG+   + K    ++E    G  P+ ++Y+T+I  + K G+L
Sbjct: 565 RSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQL 624

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TA 371
             A  +F ++ S+G++ D   Y T +  Y   G+   A  ++  + +    P E    T 
Sbjct: 625 SSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTL 684

Query: 372 ITILARAGRIEEATWVFR 389
           +    + G+ EE   + +
Sbjct: 685 VDAYCKIGKFEEVERILK 702



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 2/287 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  +P +  +N +L  + R  +WE A  + DE+ +    P+   Y++++  +   G  +
Sbjct: 426 QAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELE 485

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                +  +    V    +L    + +  K S   +A   F  ++  G + D   +N MI
Sbjct: 486 KLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMI 545

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +++GK  +  +A      +R  G++PD V+Y+ L+ +Y     + +  +   E       
Sbjct: 546 SMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQT 605

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            DL + N +I  Y +      A R+F  M   GI P   +YNT +  Y    +F EA+ +
Sbjct: 606 PDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSV 665

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            + M +   + + VTY T++  Y K  + E+   +++ +++   +PN
Sbjct: 666 VKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS--DPN 710


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 234/433 (54%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+   +N ++  +    +   A  L D M  RG  PD +TY T++    K G  D A+
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L++ME+ ++  D+V+Y+ +I+      + + A+++F+ + + GI P++V YN++I   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                + +A  L+ +M E+ + P+ V++S L++ +V+  K VEA  ++ EM + +   D+
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I+ +   D   +A  +F  M      P+VV+YNTL++ + +A+   E + LFR 
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K GK
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A ++F+ L+ S +E D   Y  MI    + G V     L   L     +PN I   T
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+   R G  EEA  +FR+  + G + +   +  +I    R+   A   E+ ++MRS G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584

Query: 431 YFPDSHIIALVLN 443
           +  D+  I++V+N
Sbjct: 585 FVGDASTISMVIN 597



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 230/495 (46%), Gaps = 4/495 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  + +  +++L   L + M+   I+ D Y+Y+ LI CF +     
Sbjct: 57  QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 116

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  S+L+         S+A+++  ++      P+ V +NT+I
Sbjct: 117 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 176

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  LI+ M  +G +PD  +Y T++N   +      ALS+  +M +    
Sbjct: 177 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 236

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+     +ID         DA  LF  M   GI P+VV+YN+L+R       + +A  L
Sbjct: 237 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 296

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  NVVT++ +I  + K  +  +A  L  EM  R I+P+  TYS++I  +  
Sbjct: 297 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 356

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F+ + S     + V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +AG  + A  +F++    G   DI  +  +++   +  K    + VFE ++
Sbjct: 417 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +   PD +   +++    K  + E   DL+  +  +G   +  ++  M+S +  +    
Sbjct: 477 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 536

Query: 488 MLESLFERLDSDSNI 502
             ++LF  +  D  +
Sbjct: 537 EADALFREMKEDGTL 551



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 224/461 (48%), Gaps = 8/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEG 68
           +  R S  +++YN+++    R  Q  LA  +  +M + G  PD  T S+L+   C GK  
Sbjct: 91  QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR- 149

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A++ + QM       + V ++ LI      +  S+A+++  R+ + G  PDL  Y 
Sbjct: 150 -ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 208

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T++N   K      A  L+++M +  ++ D V Y+T+++         +AL++F EM+  
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ T N +I          DA RL   M +  I+P+VV+++ L+  + +     EA
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 328

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L+  M ++ I+ ++ TY+++I  +      ++A ++ + M ++   PN +TY+T+I  
Sbjct: 329 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 388

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + KA +++    LF+++   G+  + V Y T+I    + G    A+++  ++      P+
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 448

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I     +  L + G++E+A  VF     +    DI  +  MIE   +  K  +  ++F 
Sbjct: 449 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 508

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +   G  P+  I   +++ + +    E AD L+ EM+E+G
Sbjct: 509 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P+V  ++ ++   ++  +   A  L+DEM +R I PD +TYS+LI  F      D
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M       ++V Y+ LI+   K     + + +F  +   G+V + V YNT+I
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A     A+ + ++M   GV PD ++YS LL+   +  K  +AL VF  + +    
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T NIMI+   +    +D   LF S+   G+ P+V+ Y T++  +    L  EA  L
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M+      N  TYNT+I+   +  +   +  L++EM++ G   +A T S +I +   
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 600

Query: 312 AGKLDRA 318
            G+L+++
Sbjct: 601 DGRLEKS 607



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 181/404 (44%), Gaps = 7/404 (1%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL D   A+ +F  +  S  +P +V +N +++   K   F     L E M+   +  D  
Sbjct: 44  KLDD---AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY 100

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+ L+N +    +   AL+V  +M ++    D+ T + +++ Y       +A  L   M
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             M   P+ V++NTL+          EA+ L   M  +  + ++ TY T++    K  + 
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A +L+++M+   IE + + Y+TII        ++ A  LF ++ + G+  + V Y ++
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I      G  + A RLL ++ +    PN +     I    + G++ EA  ++ +      
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             DI  +  +I  F  + +      +FE M S   FP+      ++  + K +  E   +
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 400

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           L+ EM + G V +   +  ++       D +M + +F+++ SD 
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ ++++  P ++ YN+++  + +A + E    LF  +  +G+ P+   Y+T+
Sbjct: 467 KALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 525

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G+ + A +  ++M++D    +   Y+ LI    +  D + +  +   ++S G 
Sbjct: 526 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 585

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D    + +IN+    +L K
Sbjct: 586 VGDASTISMVINMLHDGRLEK 606


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 234/433 (54%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+   +N ++  +    +   A  L D M  RG  PD +TY T++    K G  D A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L++ME+ ++  D+V+Y+ +I+      + + A+++F+ + + GI P++V YN++I   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                + +A  L+ +M E+ + P+ V++S L++ +V+  K VEA  ++ EM + +   D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I+ +   D   +A  +F  M      P+VV+YNTL++ + +A+   E + LFR 
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A ++F+ L+ S +E D   Y  MI    + G V     L   L     +PN I   T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+   R G  EEA  +FR+  + G + +   +  +I    R+   A   E+ ++MRS G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 431 YFPDSHIIALVLN 443
           +  D+  I++V+N
Sbjct: 601 FVGDASTISMVIN 613



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 230/495 (46%), Gaps = 4/495 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  + +  +++L   L + M+   I+ D Y+Y+ LI CF +     
Sbjct: 73  QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  S+L+         S+A+++  ++      P+ V +NT+I
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  LI+ M  +G +PD  +Y T++N   +      ALS+  +M +    
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+     +ID         DA  LF  M   GI P+VV+YN+L+R       + +A  L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  NVVT++ +I  + K  +  +A  L  EM  R I+P+  TYS++I  +  
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F+ + S     + V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +AG  + A  +F++    G   DI  +  +++   +  K    + VFE ++
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +   PD +   +++    K  + E   DL+  +  +G   +  ++  M+S +  +    
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552

Query: 488 MLESLFERLDSDSNI 502
             ++LF  +  D  +
Sbjct: 553 EADALFREMKEDGTL 567



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 224/461 (48%), Gaps = 8/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEG 68
           +  R S  +++YN+++    R  Q  LA  +  +M + G  PD  T S+L+   C GK  
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR- 165

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A++ + QM       + V ++ LI      +  S+A+++  R+ + G  PDL  Y 
Sbjct: 166 -ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T++N   K      A  L+++M +  ++ D V Y+T+++         +AL++F EM+  
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ T N +I          DA RL   M +  I+P+VV+++ L+  + +     EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L+  M ++ I+ ++ TY+++I  +      ++A ++ + M ++   PN +TY+T+I  
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + KA +++    LF+++   G+  + V Y T+I    + G    A+++  ++      P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I     +  L + G++E+A  VF     +    DI  +  MIE   +  K  +  ++F 
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +   G  P+  I   +++ + +    E AD L+ EM+E+G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P+V  ++ ++   ++  +   A  L+DEM +R I PD +TYS+LI  F      D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M       ++V Y+ LI+   K     + + +F  +   G+V + V YNT+I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A     A+ + ++M   GV PD ++YS LL+   +  K  +AL VF  + +    
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T NIMI+   +    +D   LF S+   G+ P+V+ Y T++  +    L  EA  L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M+      N  TYNT+I+   +  +   +  L++EM++ G   +A T S +I +   
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616

Query: 312 AGKLDRA 318
            G+L+++
Sbjct: 617 DGRLEKS 623



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 181/404 (44%), Gaps = 7/404 (1%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL D   A+ +F  +  S  +P +V +N +++   K   F     L E M+   +  D  
Sbjct: 60  KLDD---AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY 116

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+ L+N +    +   AL+V  +M ++    D+ T + +++ Y       +A  L   M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             M   P+ V++NTL+          EA+ L   M  +  + ++ TY T++    K  + 
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A +L+++M+   IE + + Y+TII        ++ A  LF ++ + G+  + V Y ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I      G  + A RLL ++ +    PN +     I    + G++ EA  ++ +      
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             DI  +  +I  F  + +      +FE M S   FP+      ++  + K +  E   +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           L+ EM + G V +   +  ++       D +M + +F+++ SD 
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ ++++  P ++ YN+++  + +A + E    LF  +  +G+ P+   Y+T+
Sbjct: 483 KALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G+ + A +  ++M++D    +   Y+ LI    +  D + +  +   ++S G 
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D    + +IN+    +L K
Sbjct: 602 VGDASTISMVINMLHDGRLEK 622


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 235/454 (51%), Gaps = 11/454 (2%)

Query: 23  NVVLRNVL------RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           N V  NV+      R   W+    LF EM+   I+PD YTY+T+IT   +      A+  
Sbjct: 247 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 306

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M++     + V Y+ L+++  K   + +A  +   ++++GI P++V YN +I  + +
Sbjct: 307 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYAR 366

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A L  EA  L + +  +G+ PD  +Y TL++ +    ++ +AL  F EM + NC  ++ T
Sbjct: 367 AGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVT 426

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+ID+YG+++   D  ++F  M++    P +V++N+LL+ +G   +  E  ++FR M+
Sbjct: 427 YNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK 486

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R      V T+N +I+ YG+    + + ++ + +   G++P   T++ ++A   + G+  
Sbjct: 487 RAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 546

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQP-NTIPRETA 371
           +   + Q++  +G+++    +  +I +Y   G     ++ + EL    +QP + I  +T 
Sbjct: 547 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTF 606

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +    + G   EA     Q +D G   DI VF  MI + ++       +++ E++R A  
Sbjct: 607 VLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQL 666

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD      +++ YG+   +  A+++ SEM+  G
Sbjct: 667 KPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAG 700



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 228/485 (47%), Gaps = 18/485 (3%)

Query: 60  LITCFGKEGMFDSAIS---WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
            +   G++G +  A+    W+++ +  ++ G  V  ++++ +         A+ +F  LK
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKHDCFKLRG--VATASILSVLGNHEQLPAALELFESLK 204

Query: 117 SS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
                  D+ AY ++I++  +A+ F E   L E M+ +G + + V+Y+ +L+LY +    
Sbjct: 205 QDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDS 264

Query: 176 VEAL-SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
            + + S+F EM ++    D  T N MI    Q    ++A RLF  M++ G  P+ V+YN 
Sbjct: 265 WDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA 324

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL VYG+  +  EA  L   M+   I  N+VTYN +I  Y ++   ++A  L + + ++G
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+  TY T+I+ + +A + ++A   F ++R +    + V Y  +I  Y R+  +    
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 444

Query: 355 RLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           ++   +++ N  P      + +      G + E + VFR+   AG +  +  F  +IE +
Sbjct: 445 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 504

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R       +++++ +   G  P     A ++ S  +   ++  + +  EM E G   SD
Sbjct: 505 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 564

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI----YERANRLNDASR 526
             H  ++  Y     F  L    + L+  +   K+ L  ++       Y +    N+A  
Sbjct: 565 ACHAGLIHSYANSGQFFQLRKYIDELEKSA---KQPLSGILCKTFVLAYCKCGMDNEAQL 621

Query: 527 IMNRM 531
            +N++
Sbjct: 622 ALNQL 626



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 216/507 (42%), Gaps = 75/507 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP  + YN ++   ++    + A  LF EM++ G  P+R TY+ L+  +GK GM   A  
Sbjct: 281 SPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASE 340

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME   +S ++V Y+ LI    +     +A ++   L S G+ PD   Y T+I+ F 
Sbjct: 341 LLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFN 400

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A+ +++A     EMR+    P+ V+Y+ L+++Y    K  + + VF  M E NC  DL 
Sbjct: 401 RAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLV 460

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMG--------------------IDPSVVSYNTL 235
           T N ++  +G   M  +   +F  M++ G                    +D SV  Y  L
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGL 520

Query: 236 LRV-------------------------------YGEAEL-FGEAIH------------L 251
           LR                                  EA L   +A H             
Sbjct: 521 LRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQF 580

Query: 252 FRLMQR-KEIEQNV------VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F+L +   E+E++       +   T +  Y K     +A   + ++ + G  P+   ++ 
Sbjct: 581 FQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNA 640

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I++  K G ++RA  L +++R + ++ D V Y  ++  Y R G+   A+ ++ E+R+  
Sbjct: 641 MISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAG 700

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             PN I   T +    + GR+++A  VF     A    D   F  ++  +S    Y   +
Sbjct: 701 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEAL 760

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGK 447
            V E M   G  P       +L+ Y +
Sbjct: 761 SVIEYMTEHGCQPTQITFKALLDGYNR 787



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 124/264 (46%), Gaps = 5/264 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +  ++ ++ R  +W+    +  EM + G+      ++ LI  +   G F     +
Sbjct: 527 PTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKY 586

Query: 77  LQQMEQD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           + ++E+     +SG  +L    +    K    ++A    ++L  +G  PD+  +N MI++
Sbjct: 587 IDELEKSAKQPLSG--ILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISM 644

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    + A  L+EE+R+  +KPD V+Y+ L+++Y     + +A  V +EM       +
Sbjct: 645 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPN 704

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L T N ++  Y +     DA R+F  M    + P   ++NTL+  Y    L+ EA+ +  
Sbjct: 705 LITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 764

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKS 277
            M     +   +T+  ++  Y ++
Sbjct: 765 YMTEHGCQPTQITFKALLDGYNRN 788



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/295 (20%), Positives = 133/295 (45%), Gaps = 1/295 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A Y P V  +N+++    R    + +  ++  + + G+ P   T++ L+    +EG +  
Sbjct: 488 AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQ 547

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMI 131
                Q+M +  +      ++ LI        + +       L+ S   P   +   T +
Sbjct: 548 CEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFV 607

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             + K  +  EA+L + ++ + G  PD   ++ ++++  +      A+ +  E+ +    
Sbjct: 608 LAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 667

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T N ++ +YG+  M   A+ +   MR+ G  P++++YNTLL  Y +     +A  +
Sbjct: 668 PDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARV 727

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           F  M    +  +  T+NT++  Y     +++A ++++ M   G +P  IT+  ++
Sbjct: 728 FGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALL 782



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 41/311 (13%)

Query: 230 VSYNTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V+  ++L V G  E    A+ LF  L Q +    +V  Y ++I I  ++   ++   L +
Sbjct: 178 VATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFE 237

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            MQ  G   NA+TY+ ++ ++GK G   DR   LFQ+++   +  D   Y TMI A  + 
Sbjct: 238 TMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQN 297

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                A RL  E+++    PN +     + +  + G  +EA+ +  +   AG   +I  +
Sbjct: 298 SHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTY 357

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I  ++R         + + + S G  PD      +++++ +   +E A + ++EM++
Sbjct: 358 NELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 417

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
             C                                  NI     ++++  IY R  +L+D
Sbjct: 418 TNCT--------------------------------PNIVT---YNILIDIYGRMEKLDD 442

Query: 524 ASRIMNRMNKR 534
             ++   M ++
Sbjct: 443 MMKVFKFMQEK 453



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 83/158 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP +  +N ++    +    E A  L +E+R+  + PD  TY+ L++ +G+EGM+  A 
Sbjct: 631 HSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAE 690

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M +   + +L+ Y+ L+    K      A  +F  + ++ + PD   +NT++  +
Sbjct: 691 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 750

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
               L+KEA  +IE M E G +P  +++  LL+ Y  N
Sbjct: 751 SSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRN 788


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 234/454 (51%), Gaps = 11/454 (2%)

Query: 23  NVVLRNVL------RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           N V  NV+      R   W+    LF EM+   I+PD YTY+T+IT   +      A+  
Sbjct: 108 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 167

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M++     + V Y+ L+++  K   + +A  +   ++++GI P++V YN +I  + +
Sbjct: 168 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYAR 227

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A L  EA  L + +  +G+ PD  +Y TL++ +    ++ +AL  F EM + NC  ++ T
Sbjct: 228 AGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVT 287

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+ID+YG+++   D  ++F  M++    P +V++N+LL+ +G   +  E  ++FR M+
Sbjct: 288 YNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK 347

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R      V T+N +I+ YG+    + + ++ + +   G++P   T++ ++A   + G+  
Sbjct: 348 RAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 407

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQP-NTIPRETA 371
           +   + Q++  +G+++    +  +I +Y   G     ++ + EL    +QP + I  +T 
Sbjct: 408 QCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTF 467

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +    +     EA     Q +D G   DI VF  MI + ++       +++ E++R A  
Sbjct: 468 VLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQL 527

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD      +++ YG+   +  A+++ SEM+  G
Sbjct: 528 KPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 214/450 (47%), Gaps = 11/450 (2%)

Query: 60  LITCFGKEGMFDSAIS---WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
            +   G++G +  A+    W+++ +  ++ G  V  ++++ +         A+ +F  LK
Sbjct: 8   FVKALGRQGKWKKALEVFEWIRKHDCFKLRG--VATASILSVLGNHEQLPAALELFESLK 65

Query: 117 SS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
                  D+ AY ++I++  +A+ F E   L E M+ +G + + V+Y+ +L+LY +    
Sbjct: 66  QDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDS 125

Query: 176 VEAL-SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
            + + S+F EM ++    D  T N MI    Q    ++A RLF  M++ G  P+ V+YN 
Sbjct: 126 WDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA 185

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL VYG+  +  EA  L   M+   I  N+VTYN +I  Y ++   ++A  L + + ++G
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+  TY T+I+ + +A + ++A   F ++R +    + V Y  +I  Y R+  +    
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305

Query: 355 RLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           ++   +++ N  P      + +      G + E + VFR+   AG +  +  F  +IE +
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 365

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R       +++++ +   G  P     A ++ S  +   ++  + +  EM E G   SD
Sbjct: 366 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 425

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDS 500
             H  ++  Y     F  L    + L+  +
Sbjct: 426 ACHAGLIHSYANSGQFFQLRKYIDELEKSA 455



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 215/505 (42%), Gaps = 75/505 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP  + YN ++   ++    + A  LF EM++ G  P+R TY+ L+  +GK GM   A  
Sbjct: 142 SPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASE 201

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME   +S ++V Y+ LI    +     +A ++   L S G+ PD   Y T+I+ F 
Sbjct: 202 LLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFN 261

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A+ +++A     EMR+    P+ V+Y+ L+++Y    K  + + VF  M E NC  DL 
Sbjct: 262 RAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLV 321

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMG--------------------IDPSVVSYNTL 235
           T N ++  +G   M  +   +F  M++ G                    +D SV  Y  L
Sbjct: 322 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGL 381

Query: 236 LRV-------------------------------YGEAEL-FGEAIH------------L 251
           LR                                  EA L   +A H             
Sbjct: 382 LRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQF 441

Query: 252 FRLMQR-KEIEQNV------VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F+L +   E+E++       +   T +  Y K     +A   + ++ + G  P+   ++ 
Sbjct: 442 FQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNA 501

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I++  K G ++RA  L +++R + ++ D V Y  ++  Y R G+   A+ ++ E+R+  
Sbjct: 502 MISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             PN I   T +    + GR+++A  VF     A    D   F  ++  +S    Y   +
Sbjct: 562 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEAL 621

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSY 445
            V E M   G  P       +L+ Y
Sbjct: 622 SVIEYMTEHGCQPTQITFKALLDGY 646



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/295 (20%), Positives = 133/295 (45%), Gaps = 1/295 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A Y P V  +N+++    R    + +  ++  + + G+ P   T++ L+    +EG +  
Sbjct: 349 AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQ 408

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMI 131
                Q+M +  +      ++ LI        + +       L+ S   P   +   T +
Sbjct: 409 CEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFV 468

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             + K  +  EA+L + ++ + G  PD   ++ ++++  +      A+ +  E+ +    
Sbjct: 469 LAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 528

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T N ++ +YG+  M   A+ +   MR+ G  P++++YNTLL  Y +     +A  +
Sbjct: 529 PDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARV 588

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           F  M    +  +  T+NT++  Y     +++A ++++ M   G +P  IT+  ++
Sbjct: 589 FGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALL 643



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 41/311 (13%)

Query: 230 VSYNTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V+  ++L V G  E    A+ LF  L Q +    +V  Y ++I I  ++   ++   L +
Sbjct: 39  VATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFE 98

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            MQ  G   NA+TY+ ++ ++GK G   DR   LFQ+++   +  D   Y TMI A  + 
Sbjct: 99  TMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQN 158

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                A RL  E+++    PN +     + +  + G  +EA+ +  +   AG   +I  +
Sbjct: 159 SHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTY 218

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I  ++R         + + + S G  PD      +++++ +   +E A + ++EM++
Sbjct: 219 NELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 278

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
             C                                  NI     ++++  IY R  +L+D
Sbjct: 279 TNCT--------------------------------PNIVT---YNILIDIYGRMEKLDD 303

Query: 524 ASRIMNRMNKR 534
             ++   M ++
Sbjct: 304 MMKVFKFMQEK 314



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 82/155 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP +  +N ++    +    E A  L +E+R+  + PD  TY+ L++ +G+EGM+  A 
Sbjct: 492 HSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAE 551

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M +   + +L+ Y+ L+    K      A  +F  + ++ + PD   +NT++  +
Sbjct: 552 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 611

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
               L+KEA  +IE M E G +P  +++  LL+ Y
Sbjct: 612 SSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 234/446 (52%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P  F +  ++  +    +   A  L D+M QRG  PD  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A+S L++ME+ ++  D+V+Y+ +I+   K      A+++F+ + + GI 
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+  Y+++I+       + +A  L+ +M E+ + P+ V++S L++ +V+  K VEA  +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +   D+ T + +I+ +   D   +A  +F  M      P+VV+Y+TL++ + +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ ++    K GKL +A ++F+ L+ S +E D   Y  MI    + G V     L   L 
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                PN I   T I+   R G  EEA  + ++  + G + +   +  +I    R+    
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+ ++MRS G+  D+  I LV N
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTN 616



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 240/519 (46%), Gaps = 9/519 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  V +  ++EL   L ++M+  GI+ D YTYS  I CF +     
Sbjct: 76  KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  S+L+         S A+++  ++   G  PD   + T+I
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  L+++M ++G +PD V+Y T++N   +      ALS+  +M +    
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+   N +ID   +     DA  LF  M   GI P V +Y++L+        + +A  L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  NVVT++ +I  + K  +  +A  L  EM  R I+P+  TYS++I  +  
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F+ + S     + V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    +A   + A  VF+Q    G   +I  +  +++   +N K A  + VFE ++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +   PD +   +++    K  + E   +L+  +  +G   +   +  M+S +  +    
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +SL +++  D  +     ++ +     RA RL D  R
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLI----RA-RLRDGDR 589



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 215/444 (48%), Gaps = 11/444 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  ++ +   Y  +LRN L    + + A  LF +M +    P    ++ L++   K   F
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +  IS  +QM+   +S DL  YS  I    + S  S A+++ +++   G  PD+V  +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N +  +K   +A  L+++M E G KPDT +++TL++    ++K  EA+++  +M +  C
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             DL T   +++     G +D+A     L   M K  I+  VV YNT++    + +   +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALS---LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A++LF  M  K I  +V TY+++I           A+ L+ +M  R I PN +T+S +I 
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            + K GKL  A  L+ ++    ++ D   Y ++I  +     +  AK +   +      P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +   T I    +A R+EE   +FR+    G V +   +  +I  F + +   N   VF
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456

Query: 424 EKMRSAGYFPDSHIIALVLNSYGK 447
           ++M S G  P+     ++L+   K
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCK 480



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y  ++    +A+  + A  +F +M   G+ P+  TY+ L+    K G    A+   + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++  +  D+  Y+ +IE   K         +F  L   G+ P+++AYNTMI+ F +    
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  L+++M+E G  P++ +Y+TL+   + +     +  +  EM       D +T  ++
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614

Query: 201 IDVY--GQLD 208
            ++   G+LD
Sbjct: 615 TNMLHDGRLD 624



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ + +   P ++ YN+++  + +A + E    LF  +  +G++P+   Y+T+
Sbjct: 486 KAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G  + A S L++M++D    +   Y+ LI    +  D   +  +   ++S G 
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
             D      + N+    +L K
Sbjct: 605 AGDASTIGLVTNMLHDGRLDK 625


>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 859

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 241/516 (46%), Gaps = 6/516 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + +V +   +   W+ +  LF  M RQ    P+ + Y+ +IT  G+EG+ D       +M
Sbjct: 103 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEM 162

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             + V+  + +Y+ +I    +   +  ++ + + +K   + P ++ YNT+IN   +  L 
Sbjct: 163 PSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 222

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  EMR +G++PD ++Y+TLL          EA  VF  MNE     D+ T + 
Sbjct: 223 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 282

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  +G+L+  +    L   M   G  P + SYN LL  Y E     EA+ +FR MQ   
Sbjct: 283 LVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAG 342

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              N  TY+ ++ +YGK   ++   ++  EM+    +P+A TY+ +I ++G+ G      
Sbjct: 343 CVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV 402

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT----IL 375
            LF  +    VE +   Y+ +I A  + GL   AK++L  + +   +P   A T      
Sbjct: 403 TLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAF 462

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +A   EEA  VF    + G    +  +   I  F+R   Y     +  +M  +G   D 
Sbjct: 463 GQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDV 522

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           H    V+ ++ +  ++E A   Y EM++  C  ++     +LS+Y +    +  E  F+ 
Sbjct: 523 HSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQE 582

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +   +     + ++  +Y + +RLNDA  +++ M
Sbjct: 583 IKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 236/492 (47%), Gaps = 5/492 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    +    +FDEM   G+A   Y Y+ +
Sbjct: 118 RSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAV 177

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G F +++  L  M+Q+RVS  ++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 178 INAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 237

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD++ YNT++       L  EA ++   M E G+ PD  +YS L+  + + ++  +  
Sbjct: 238 IQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVS 297

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       D+T+ N++++ Y +L   K+A  +F  M+  G   +  +Y+ LL +Y
Sbjct: 298 ELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLY 357

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+   + +   +F  M+    + +  TYN +I+++G+    ++   L  +M    +EPN 
Sbjct: 358 GKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNM 417

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY  +I   GK G  + A  +   +   G+      Y  +I A+ +  L   A  + + 
Sbjct: 418 ETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNT 477

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +  + P      + I   AR G  +EA  +  +  ++G  +D+  F  +I+ F +  +
Sbjct: 478 MNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQ 537

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           Y   ++ + +M  A   P+   + +VL+ Y      + +++ + E++  G + S   +  
Sbjct: 538 YEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCL 597

Query: 476 MLSLYGARKDFN 487
           ML+LY      N
Sbjct: 598 MLALYAKNDRLN 609



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 230/472 (48%), Gaps = 9/472 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ + +E R SPS+  YN V+    R    WE   GLF EMR  GI PD  TY+TL
Sbjct: 190 SLELLNGMKQE-RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTL 248

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +      G+ D A    + M +  +  D+  YS L++   KL+   K   +   ++S G 
Sbjct: 249 LGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGN 308

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++  + +    KEA  +  +M+  G   +  +YS LLNLY ++ ++ +   
Sbjct: 309 LPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRD 368

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   D  T NI+I V+G+    K+   LF  M +  ++P++ +Y  L+   G
Sbjct: 369 IFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACG 428

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L+ +A  +   M  K I  +   Y  +I+ +G++  +E+A  +   M   G  P   
Sbjct: 429 KGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVE 488

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY++ I  + + G    A  +  ++  SG++ D   +  +I A+ + G    A +   E+
Sbjct: 489 TYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEM 548

Query: 361 R----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                +PN +  E  +++   AG ++E+   F++   +G +  +  +  M+ L+++N + 
Sbjct: 549 EKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRL 608

Query: 417 ANVIEVFEKMRSAGYFPDSH--IIALVLNSYGKLREFETADDLYSEMQEEGC 466
            +   + ++M +     D H  I  ++   +     ++  + ++ ++  EGC
Sbjct: 609 NDAYNLIDEMITM-RVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLNSEGC 659



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 144/326 (44%), Gaps = 36/326 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN++++       ++    LF +M +  + P+  TY  LI   GK G+++ A   
Sbjct: 380 PDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKI 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  +      Y+ +IE   + + Y +A+ +F+ +   G  P +  YN+ I+ F +
Sbjct: 440 LLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFAR 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L+KEA  ++  M E G+K D  S++ ++  + +  ++ EA+  + EM + NC  +  T
Sbjct: 500 GGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELT 559

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR--- 253
             +++ VY    +  +++  F  ++  GI PSV+ Y  +L +Y + +   +A +L     
Sbjct: 560 LEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMI 619

Query: 254 LMQRKEIEQNVVT---------------------------------YNTMIKIYGKSLEH 280
            M+  +I Q +                                   YN +++      + 
Sbjct: 620 TMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWWMFQR 679

Query: 281 EKATNLMQEMQNRGIEPNAITYSTII 306
           E+A  ++ E   RG+ P     S ++
Sbjct: 680 ERAARVLNEASKRGLFPELFRKSKLV 705



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 11/280 (3%)

Query: 225 IDP--SVVSYNTLLRVYGEAELFGE---AIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSL 278
           +DP  + +S N    V+ E    G+   ++ LF+ MQR+   + N   Y  MI + G+  
Sbjct: 91  LDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREG 150

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +K   +  EM + G+      Y+ +I  +G+ G+   +  L   ++   V    + Y 
Sbjct: 151 LLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYN 210

Query: 339 TMIVAYERVGL-----VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
           T+I A  R GL     +     + HE  QP+ I   T +   A  G  +EA  VFR   +
Sbjct: 211 TVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNE 270

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G V DI+ +  +++ F +  +   V E+  +M S G  PD     ++L +Y +L   + 
Sbjct: 271 SGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKE 330

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           A D++ +MQ  GCV +   +  +L+LYG    ++ +  +F
Sbjct: 331 AMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIF 370



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 6/273 (2%)

Query: 270 MIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           + K + +  + +++  L + MQ +   +PN   Y+ +I + G+ G LD+   +F ++ S+
Sbjct: 106 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSN 165

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG-RIEE 383
           GV     +Y  +I AY R G    +  LL+ ++Q    P+ +   T I   AR G   E 
Sbjct: 166 GVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEG 225

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              +F +    G   D+  +  ++   +          VF  M  +G  PD +  + ++ 
Sbjct: 226 LLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQ 285

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           ++GKL   E   +L  EM+  G +     +  +L  Y           +F ++ +   + 
Sbjct: 286 TFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVA 345

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
               + V+  +Y +  R +D   I   M    T
Sbjct: 346 NAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT 378


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 226/436 (51%), Gaps = 4/436 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P  F +N ++  + R  +   A  L D M  +G  PD  TY  ++    K G  D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S L++MEQ ++   +V+Y+ +I+      + + A+++F+ + + GI P++V YN++I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                   + +A  L+ +M E+ + P+ V++S L++ +V+  K VEA  ++ EM + +  
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +I+ +   D   +A  +F  M      P+VV+YNTL++ + +A+   E + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M ++ +  N VTY T+I  + ++ E + A  + ++M + G+ P+ +TYS ++     
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            GK++ A ++F+ L+ S +E D   Y  MI    + G V     L   L     +PN + 
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T ++   R G  EEA  +FR+  + G + D   +  +I    R+   A   E+  +MR
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598

Query: 428 SAGYFPDSHIIALVLN 443
           S  +  D+  I LV N
Sbjct: 599 SCRFVGDASTIGLVTN 614



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+ +   +S   + Y  +  N L   + + A  LF +M +    P    +S L++   K 
Sbjct: 38  WVRD---FSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM 94

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
             FD  IS  +QM+   +S +L  YS LI    + S  S A+++ +++   G  PD+V  
Sbjct: 95  NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N+++N F       +A  L+ +M E G +PD+ +++TL++    +++  EA+++   M  
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214

Query: 188 VNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
             C  DL T  I+++     G +D+A     L   M +  I+P VV YNT++      + 
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALS---LLKKMEQGKIEPGVVIYNTIIDALCNYKN 271

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A++LF  M  K I  NVVTYN++I+          A+ L+ +M  R I PN +T+S 
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I  + K GKL  A  L+ ++    ++ D   Y ++I  +     +  AK +   +    
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             PN +   T I    +A R++E   +FR+    G V +   +  +I  F + ++  N  
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            VF++M S G  PD    +++L+      + ETA  ++  +Q
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 222/493 (45%), Gaps = 39/493 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ +L  + +  +++L   L ++M+  GI+ + YTYS LI CF +     
Sbjct: 74  KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  ++L+      +  S A+S+  ++   G  PD   +NT+I
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +     EA  L++ M  +G +PD V+Y  ++N   +      ALS+  +M +    
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +   N +ID         DA  LF  M   GI P+VV+YN+L+R       + +A  L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP-------------- 297
              M  ++I  NVVT++ +I  + K  +  +A  L  EM  R I+P              
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373

Query: 298 ---------------------NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                                N +TY+T+I  + KA ++D    LF+++   G+  + V 
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAF 392
           Y T+I  + +     +A+ +  ++     +P     +I    L   G++E A  VF    
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
            +    DI  +  MIE   +  K  +  ++F  +   G  P+      +++ + +    E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553

Query: 453 TADDLYSEMQEEG 465
            AD L+ EM+EEG
Sbjct: 554 EADALFREMKEEG 566



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 3/377 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ +  P V  YN ++  +   K    A  LF EM  +GI P+  TY++LI C    G +
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L  M + +++ ++V +S LI+   K     +A  ++  +    I PD+  Y+++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F       EA+ + E M  +   P+ V+Y+TL+  + +  +  E + +F EM++   
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T   +I  + Q     +A  +F  M   G+ P +++Y+ LL           A+ 
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  +QR ++E ++ TYN MI+   K+ + E   +L   +  +G++PN +TY+T+++ + 
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G  + A  LF++++  G   D   Y T+I A+ R G  A +  L+ E+R    +   +
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607

Query: 371 AI---TILARAGRIEEA 384
            I   T +   GR++++
Sbjct: 608 TIGLVTNMLHDGRLDKS 624



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 186/404 (46%), Gaps = 7/404 (1%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL D   A+++F  +  S   P +V ++ +++   K   F     L E+M+  G+  +  
Sbjct: 61  KLDD---AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS L+N +    +   AL+V A+M ++    D+ T N +++ +   +   DA  L   M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +MG  P   ++NTL+          EA+ L   M  K  + ++VTY  ++    K  + 
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A +L+++M+   IEP  + Y+TII        ++ A  LF ++ + G+  + V Y ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I      G  + A RLL ++ +    PN +     I    + G++ EA  ++ +      
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             DI  +  +I  F  + +      +FE M S   FP+      ++  + K +  +   +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           L+ EM + G V +   +  ++  +   ++ +  + +F+++ SD 
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 253/543 (46%), Gaps = 42/543 (7%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P    YN ++    RA QW  A  + D+M +  I P R TY+ +I   G  G +
Sbjct: 182 QEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNW 241

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DLV ++ ++   +  S YSKAI+ F  +K + I PD    N +
Sbjct: 242 KKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIV 301

Query: 131 INVFGKAKLFKEARLLIEEMRE-------------------------------------Q 153
           I+   K   + EA  L+  MRE                                     +
Sbjct: 302 IHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAE 361

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           GVKP+ VSY+ LL  Y       +AL +F  + +     D+ +   +++ YG+    + A
Sbjct: 362 GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA 421

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
              F  MRK    P++VSYN L+  YG A +F EAI L   M++  I  +VV+ +T++  
Sbjct: 422 REAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA 481

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+  +  K   +++  ++RGI+ N + Y++ I  +   G   +A  L+  + +S V  D
Sbjct: 482 CGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPD 541

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHE---LRQPNTIP-RETAITILARAGRIEEATWVFR 389
            V Y  +I    +VG  A + +   +   LR P T     + I    + G++ EA   F 
Sbjct: 542 AVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFS 601

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              ++G + D+  +  MIE ++ +  + N  ++F++M      PD+ I + ++ +  +  
Sbjct: 602 SMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGS 661

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD-SNINKKELH 508
           + E    L   M+E+    + + +F++++     +D+     + E LDS  S+I+   L+
Sbjct: 662 QHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLN 721

Query: 509 HVV 511
           H++
Sbjct: 722 HLL 724



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 245/536 (45%), Gaps = 9/536 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +  W+  +  Y      Y +++R   R  Q + A GLF EM++    PD   Y++LI
Sbjct: 138 AVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLI 197

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G +  AI+ +  M +  +      Y+N+I       ++ KA+ +  ++  +G+ 
Sbjct: 198 HAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVG 257

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDLV +N +++ F     + +A    E M+   + PDT + + +++  V++ ++ EA+ +
Sbjct: 258 PDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIEL 317

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
              M E    CP D+ T   ++  Y      +D   +F  M   G+ P++VSYN LL  Y
Sbjct: 318 LNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAY 377

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  +A+ +F+L+++  +  +VV+Y T++  YG+S + EKA    +EM+     PN 
Sbjct: 378 ASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNI 437

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ++Y+ +I  +G AG    A  L  ++   G+  D V   T++ A  R   +     +L  
Sbjct: 438 VSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEA 497

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            +    + N +   + I      G   +A  ++     +    D   +  +I    +  K
Sbjct: 498 AKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGK 557

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           YA  ++ FE M          + + ++ SY K  +   A+  +S M+E GC+     +  
Sbjct: 558 YAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTA 617

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           M+  Y     +     LF+ ++ ++ +    +  + + + E  NR +   R++  M
Sbjct: 618 MIEAYNDDGSWRNAWDLFKEMEGNT-VQPDAI--ICSSLMEALNRGSQHERVLQLM 670



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 187/426 (43%), Gaps = 31/426 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  +L    R+ Q E A   F EMR+    P+  +Y+ LI  +G  GMF  AIS 
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISL 459

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +ME+D +  D+V  S L+    +    +K  +I    KS GI  ++V YN+ I  +  
Sbjct: 460 LHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLN 519

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              + +A  L   M    V PD V+Y+ L++   +  K+ E+L  F +M ++  PL    
Sbjct: 520 FGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV 579

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  Y +     +A+  F SM++ G  P V++Y  ++  Y +   +  A  LF+ M+
Sbjct: 580 YSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEME 639

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + +  +++++   +  +HE+   LM+ M+ + I  N   Y  IIA         
Sbjct: 640 GNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWK 699

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A+ + + L SS   I              VG + H                   +T L 
Sbjct: 700 TASEIIEHLDSSLSSIS-------------VGTLNH------------------LLTFLG 728

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G+ E    +F +   +     +S +  ++       K+   IEV + M  AG  P  +
Sbjct: 729 KCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLY 788

Query: 437 IIALVL 442
           +   VL
Sbjct: 789 MYQNVL 794


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 233/468 (49%), Gaps = 4/468 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN  +    + ++WE A  L +E+ ++G  P   TY+ +I    K G +  A+  
Sbjct: 215 PNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDL 274

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM  + +  D++ YS++I    +   + +A+ +  ++++ G+ P++++YN+ I+   K
Sbjct: 275 LGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK 334

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  L+ EM   G+ P  +SY++       N ++VEAL +  EM       +  +
Sbjct: 335 GDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTIS 394

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  +D   +    + A +L   M  +G DP ++S+N+ +   G  + +  A+ L R M 
Sbjct: 395 YNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMP 454

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  NV+TYN+ I+  G+S   ++A  L +EM  RG+ PN +TY+++I    K  + +
Sbjct: 455 TAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWE 514

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
            A  L   + + GV  D + Y + I A  +      A +LL  +     +P+ I   +A+
Sbjct: 515 LAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAV 574

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T  A++GR  EA  + +     G   +   +G  I    + +++   + + ++M++ G  
Sbjct: 575 TACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGAT 634

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           P+    +  +++  K   ++ A DL ++++ +G     Q +  ++S +
Sbjct: 635 PNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 222/451 (49%), Gaps = 6/451 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN+ +      +QW  A  L  EM   G+ PD  TY++ I    K G +  A+  L QM
Sbjct: 112 SYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQM 171

Query: 81  --EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
               + ++ D+V Y++ I        + +A+ +  ++ + G+ P+L+ YN+ I    K +
Sbjct: 172 VAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGR 231

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            ++EA  L+EE+ EQG  P T +Y+ +++   +  +++EA+ +  +M   + P D+ + +
Sbjct: 232 RWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYS 291

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I   G+    K+A  L   MR  G+ P+V+SYN+ +    + + + EA+ L R M   
Sbjct: 292 SVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTV 351

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +   V++YN+       +    +A  L++EM  +GI PN I+Y++ +    K G+ ++A
Sbjct: 352 GLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKA 411

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             L + + + G + D + + + I A  R      A  LL E+      PN I   +AI  
Sbjct: 412 VKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEA 471

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             R+ R +EA  +FR+    G   ++  +  MI+  ++ +++   +++   M + G  PD
Sbjct: 472 CGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPD 531

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                  + + GK  ++E A  L   M   G
Sbjct: 532 VISYNSAIEACGKGEQWELALQLLKGMPTRG 562



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 214/438 (48%), Gaps = 4/438 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + PS   YN V+    +  +W  A  L  +M    I  D  +YS++I   G+   + 
Sbjct: 245 EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWK 304

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L+QM    VS +++ Y++ I+   K   + +A+ +   + + G+VP +++YN+  
Sbjct: 305 EAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSAT 364

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                   + EA  L++EM  QG+ P+T+SY++ L+   +  ++ +A+ +   M+ V   
Sbjct: 365 AACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSD 424

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + N  ID  G+    + A  L   M   G+ P+V++YN+ +   G +  + EA+ L
Sbjct: 425 PDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGL 484

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  NVVTYN+MI    K  + E A  L+  M  RG+ P+ I+Y++ I   GK
Sbjct: 485 FREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGK 544

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             + + A  L + + + G + D + Y + + A  + G    A  LL ++      PNT+ 
Sbjct: 545 GEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVS 604

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              AI    +  + + A  + ++    G   ++  +   I+  ++  ++   +++   +R
Sbjct: 605 YGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLR 664

Query: 428 SAGYFPDSHIIALVLNSY 445
             G  PD+     V++++
Sbjct: 665 RQGLTPDAQTYLTVISAF 682



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 163/331 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +YN          +W  A  L  EM  +GIAP+  +Y++ +    K G ++ A+  
Sbjct: 355 PTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKL 414

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M       D++ +++ I+   +   +  A+ +   + ++G+ P+++ YN+ I   G+
Sbjct: 415 LRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGR 474

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +  ++EA  L  EM  +G+ P+ V+Y+++++   +  ++  A+ +   M       D+ +
Sbjct: 475 SARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVIS 534

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  I+  G+ +  + A +L   M   G  P ++SYN+ +    ++  + EA+ L + M 
Sbjct: 535 YNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMA 594

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N V+Y   I   GK  + + A  +++EMQ  G  PN ITYS  I    K G+  
Sbjct: 595 TVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWK 654

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  L   LR  G+  D   Y T+I A++R 
Sbjct: 655 EAVDLLTDLRRQGLTPDAQTYLTVISAFQRC 685



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 187/398 (46%), Gaps = 9/398 (2%)

Query: 77  LQQMEQDRVSG---DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           L  +++ ++SG   D   Y+  I        ++ A+ +   + + G+ PD+V YN+ I  
Sbjct: 95  LAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAA 154

Query: 134 FGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             K   +KEA  L+ +M    +G+ PD V+Y++ +       ++ EA+ +  +M     P
Sbjct: 155 CSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVP 214

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +L T N  I    +    ++A  L   + + G  PS  +YN ++    +   + EA+ L
Sbjct: 215 PNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDL 274

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M   +I  +V++Y+++I   G+    ++A +L+++M+ +G+ PN I+Y++ I    K
Sbjct: 275 LGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK 334

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             +   A  L +++ + G+    + Y +   A    G    A  LL E+      PNTI 
Sbjct: 335 GDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTIS 394

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             +A+   A+ G+ E+A  + R     G   DI  F   I+   R +++   +E+  +M 
Sbjct: 395 YNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMP 454

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +AG  P+       + + G+   ++ A  L+ EM   G
Sbjct: 455 TAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG 492



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 142/354 (40%), Gaps = 41/354 (11%)

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +G KP ++     + L  +   +  AL+   E       LD T+ NI I           
Sbjct: 69  RGGKPKSLVKLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWAT 128

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM----------------- 255
           A RL   M   G+ P VV+YN+ +    +   + EA+ L   M                 
Sbjct: 129 AVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSA 188

Query: 256 --------QRKE------------IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
                   + KE            +  N++TYN+ I    K    E+A +L++E+  +G 
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF 248

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            P+  TY+ +I    K G+   A  L  ++ ++ +  D + Y ++I A  R      A  
Sbjct: 249 PPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMD 308

Query: 356 LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           LL ++R     PN I   +AI   A+  R +EA  + R+    G V  +  +       +
Sbjct: 309 LLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACA 368

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            N ++   +E+ ++M + G  P++      L++  K  ++E A  L   M   G
Sbjct: 369 VNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVG 422



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 43/89 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+  +Y   +    + +QW++A  +  EM+  G  P+  TYS  I    K+G +  A+ 
Sbjct: 599 TPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVD 658

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSD 104
            L  + +  ++ D   Y  +I   ++ SD
Sbjct: 659 LLTDLRRQGLTPDAQTYLTVISAFQRCSD 687


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 249/519 (47%), Gaps = 11/519 (2%)

Query: 33  KQWELAHGLFDE-MRQRGIAP--DRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           K+++LA   FD  M+Q+      D    + +I+  GKEG   SA +    +++D  S D+
Sbjct: 149 KKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDV 208

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIE 148
             Y++LI        Y +A+++F +++  G  P L+ YN ++NVFGK    + +   L+E
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +M+  G+ PD  +Y+TL+          EA  VF EM       D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSH 328

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             K+A ++   M   G  PS+V+YN+L+  Y    +  EA+ L   M  K  + +V TY 
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++  + ++ + E A N+ +EM+N G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVC 448

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIEEA 384
           G+  D V + T++  + + G+ +    +  E+++   +P RET  T++   +R G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             V+R+  DAG   D+S +  ++   +R   +    +V  +M      P+      +L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD-FNMLESLFERLDSDSNIN 503
           Y   +E      L  E+   G +    V  + L L  ++ D     E  F  L       
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
                + +  IY R   +  A+ +++ M K R F  S+ 
Sbjct: 628 DITTLNSMVSIYGRRQMVGKANEVLDYM-KERGFTPSMA 665



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 234/461 (50%), Gaps = 7/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W     L ++M+  GIAPD YTY+TLITC  +  
Sbjct: 235 EEEGCKPTLITYNVIL-NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +   A    ++M+    S D V Y+ L+++  K     +A+ + + ++ +G  P +V YN
Sbjct: 294 LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYN 353

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+ + +  +  EA  L  +M E+G KPD  +Y+TLL+ +    K   A+++F EM   
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNA 413

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C  ++ T N  I +YG      D  ++F  +   G+ P +V++NTLL V+G+  +  E 
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F+ M+R        T+NT+I  Y +    E+A  + + M + G+ P+  TY+T++A 
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY---ERVGLV-AHAKRLLHELRQPN 364
             + G  +++  +  ++     + + + Y +++ AY   + +GL+ + A+ +   + +P 
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +  +T + + ++   + EA   F +  + G   DI+    M+ ++ R +      EV +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLD 653

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            M+  G+ P       ++  + +  +F  ++++  E+  +G
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 261/526 (49%), Gaps = 5/526 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM- 69
           +E  +S  V++Y  ++     + ++  A  +F +M + G  P   TY+ ++  FGK G  
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTP 259

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           ++   S +++M+ D ++ D   Y+ LI   ++ S + +A  +F  +K++G   D V YN 
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNA 319

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++V+GK+   KEA  ++ EM   G  P  V+Y++L++ Y  +    EA+ +  +M E  
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T   ++  + +    + A  +F  MR  G  P++ ++N  +++YG    F + +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  +    +  ++VT+NT++ ++G++    + + + +EM+  G  P   T++T+I+ +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G  ++A  +++++  +GV  D   Y T++ A  R G+   ++++L E+      P E
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559

Query: 370 -TAITILARAGRIEEATWVFRQAFD--AGEVKDISV-FGCMIELFSRNKKYANVIEVFEK 425
            T  ++L      +E   +   A +  +G ++  +V    ++ + S+          F +
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           ++  G+ PD   +  +++ YG+ +    A+++   M+E G   S   +  ++ ++    D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSAD 679

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F   E +   + +         ++ V   Y R  R+ DASRI + M
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 205/442 (46%), Gaps = 17/442 (3%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR---VSGD 88
            K W   HGL  + +Q           +LI      G  D+ +S L +  +D+    S +
Sbjct: 87  GKPWSY-HGLSPQGQQ--------VLRSLIEPNFDSGQLDALLSELFEPFKDKPESTSSE 137

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           L+ +   +   +K      A   F + K    + D      +I++ GK      A  L  
Sbjct: 138 LLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFN 197

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            ++E G   D  SY++L++ +  + ++ EA++VF +M E  C   L T N++++V+G++ 
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMG 257

Query: 209 MA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                   L   M+  GI P   +YNTL+       L  EA  +F  M+      + VTY
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTY 317

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N ++ +YGKS   ++A  ++ EM+  G  P+ +TY+++I+ + + G LD A  L  ++  
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
            G + D   Y T++  +ER G V  A  +  E+R    +PN       I +    G+  +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVD 437

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              +F +    G   DI  +  ++ +F +N   + V  VF++M+ AG+ P+      +++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497

Query: 444 SYGKLREFETADDLYSEMQEEG 465
           +Y +   FE A  +Y  M + G
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAG 519



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P++  +N  ++      ++     +FDE+   G++PD  T++TL+  FG+ GM DS
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM-DS 471

Query: 73  AISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            +S + ++M++     +   ++ LI    +   + +A++++ R+  +G+ PDL  YNT++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK----------------- 174
               +  +++++  ++ EM +   KP+ ++Y +LL+ Y    +                 
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 175 ------------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
                               EA   F+E+ E     D+TT N M+ +YG+  M   A+ +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEV 651

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M++ G  PS+ +YN+L+ ++  +  FG++  + R +  K I+ ++++YNT+I  Y +
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +     A+ +  EM++ GI P+ ITY+T I  +      + A  + + +   G   +   
Sbjct: 712 NTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ 362
           Y +++  Y ++     AK  + +LR 
Sbjct: 772 YNSIVDGYCKLNRKDEAKLFVEDLRN 797



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 14/294 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF--GKEGM 69
           +A  +P +  YN VL  + R   WE +  +  EM      P+  TY +L+  +  GKE  
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-- 574

Query: 70  FDSAISWLQQMEQDRVSGDL----VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
               I  +  + ++  SG +    VL   L+ +  K     +A   FS LK  G  PD+ 
Sbjct: 575 ----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
             N+M++++G+ ++  +A  +++ M+E+G  P   +Y++L+ ++  +  F ++  +  E+
Sbjct: 631 TLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  D+ + N +I  Y +    +DA R+F  MR  GI P V++YNT +  Y    +F
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMF 750

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            EAI + R M +     N  TYN+++  Y K    ++A   +++++N  ++P+A
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN--LDPHA 802


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 225/455 (49%), Gaps = 10/455 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ F Y +++  + + ++ + A+ L DEM Q+   PD   Y+ LI    K G  D+A +
Sbjct: 89  SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M +     D++ Y++LI    + +   +A  +  ++K SG+ PD VAYN ++N   
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLC 208

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +E   L+EEM E G +PDT SY+T++    E+ K+ EA  +  +M E  C  D+ 
Sbjct: 209 KQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV 268

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D + ++    +A+RL   M      P+V++Y TL+  +  A+   +A  +   M
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  I  ++VTYN ++    K+ + E+A  L++ M  +   P+ +TYS ++    K GK+
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A +L + +   G + + V + TMI  + + G V    ++L  +++    P+ +   T 
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    +A R+++A  +       G   D + +  M+E      K     EV + M   G 
Sbjct: 449 IDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC 502

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            P S   AL++     +   + A  +   M E GC
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 225/471 (47%), Gaps = 10/471 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+  +P   AYN +L  + +  Q E    L +EM + G  PD ++Y+T++ C  + G +
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   L++M + +   D+V Y++L++   K+S   +A  +   +      P ++ Y T+
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F +A    +A  ++E+M + G+ PD V+Y+ LL+   +  K  EA  +   M E +C
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T +I+++   +L    DA  L   M + G  P++V++NT++  + +A    E   
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +  LM+      +VVTY+T+I  Y K+   + A  ++      GI P+  +YS+++    
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLC 482

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
             GK++ A  +   +   G       Y  +I     V     A ++L  +     +PN  
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L +  R+E+A  V     + G V D++ +  +I+ F +  K     + F+ M
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTM 602

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           R +G  PD     ++++ + +    E A ++   M E+GC      +F ++
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 37/440 (8%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P   TY  LIT F + G     +    +M   R S D++ ++ +++   ++ D  +A+S 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 112 F---------------------------------SRLKSSGIVPDLVAYNTMINVFGKAK 138
           F                                   +      PD   YN +I    K  
Sbjct: 82  FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               AR +++ M E+   PD ++Y++L+    + +   EA  +  +M E     D    N
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +++   + +  ++  +L   M + G +P   SYNT++    E+  + EA  +   M  K
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +   +VVTYN+++  + K  + ++A  L+++M  R   P  ITY+T+I  + +A +L  A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI---- 374
             + + +  +G+  D V Y  ++    + G +  A  LL  + + +  P     +I    
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + G++++A  +     + G   ++  F  MI+ F +  K     +V E M+     PD
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 435 SHIIALVLNSYGKLREFETA 454
               + +++ Y K    + A
Sbjct: 442 VVTYSTLIDGYCKANRMQDA 461



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 190/459 (41%), Gaps = 41/459 (8%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P    Y  +I  F +A   K    +  EM  +   PD ++++T+L  Y +      ALS 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 182 FAEMNEVNC-PLDLTTCNI---------------MIDVYGQLDMAKDA---DRLFWSMRK 222
           F    ++ C P   T C +               ++D   Q D   DA   + L   + K
Sbjct: 82  FR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 223 MG-ID---------------PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           MG ID               P V++Y +L+    +     EA  L   M+   +  + V 
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN ++    K  + E+ + L++EM   G EP+  +Y+T++A   ++GK + A  + +K+ 
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIE 382
                 D V Y +++  + +V  +  A+RLL ++      P  I   T I   +RA R+ 
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  V    F AG   D+  + C+++   +  K     E+ E M      PD    ++++
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           N   KL + + A  L   M E GC  +      M+  +      +    + E +   S  
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
                +  +   Y +ANR+ DA  I+     + +++S L
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSML 478



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 41/296 (13%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  Y++++  + +  + + A  L + M +RG  P+  T++T+I  F K G  D
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                L+ M++   + D+V YS LI+   K +    A +I       GI PD  +Y++M+
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSML 478

Query: 132 NVFGKAKLFKEAR-----------------------------------LLIEEMREQGVK 156
                    +EA+                                    +++ M E+G +
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+  +YS L+N   +  +  +A++V   M E  C  D+ T   +ID + +++    A + 
Sbjct: 539 PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQC 598

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           F +MR  G +P  ++YN L+  + ++    +AI + +LM  K    +  TY ++++
Sbjct: 599 FKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 146/364 (40%), Gaps = 48/364 (13%)

Query: 156 KPDTVSYSTLLNLY--VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           KP   +Y  L+  +    N K V  L +  EM       D+ T N ++  Y Q+    D 
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMV--LEIANEMLARRFSPDVITHNTILKAYCQI---GDL 75

Query: 214 DRLFWSMR-KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           DR     R KM   P+  +Y  L+    + +   EA  L   M +K+   +   YN +I 
Sbjct: 76  DRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              K  + + A N+++ M  R   P+ ITY+++I    +   LD A  L +K++ SG+  
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVF 388
           D V Y  ++    +   +    +LL E+    R+P+T    T +  L  +G+ EEA  + 
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255

Query: 389 RQAFDAGEVKDISVFG------C-----------------------------MIELFSRN 413
            +  +     D+  +       C                             +I  FSR 
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            + A+   V E M  AG  PD      +L+   K  + E A +L   M E+ C   D V 
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA-PDVVT 374

Query: 474 FQML 477
           + +L
Sbjct: 375 YSIL 378


>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 857

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 240/516 (46%), Gaps = 6/516 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + +V +   +   W+ +  LF  M RQ    P+ + ++ +IT  G+EG+ D       +M
Sbjct: 101 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEM 160

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             + V   +  Y+ +I    +   +  ++ + + +K   + P ++ YNT+IN   +  L 
Sbjct: 161 PSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 220

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  EMR +G++PD ++Y+TLL          EA  VF  MNE     D+ T + 
Sbjct: 221 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 280

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  +G+L+  +    L   M   G  P + SYN LL  Y E     EA+ +FR MQ   
Sbjct: 281 LVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAG 340

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              N  TY+ ++ +YGK   ++   +L  EM+    +P+A TY+ +I ++G+ G      
Sbjct: 341 CVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV 400

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT----IL 375
            LF  +    VE +   Y+ +I A  + GL   AK++L  + +   +P   A T      
Sbjct: 401 TLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAF 460

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +A   EEA  +F    + G    +  +  +I  F+R   Y     +  +M  +G   D 
Sbjct: 461 GQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDV 520

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           H    V+ ++ +  ++E A   Y EM++  C  ++     +LS+Y +    +  E  F+ 
Sbjct: 521 HSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQE 580

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +   +     + ++  +Y + +RLNDA  +++ M
Sbjct: 581 IKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAM 616



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 247/517 (47%), Gaps = 8/517 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   + +++  + R    +    +FDEM   G+    Y+Y+ +
Sbjct: 116 RSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAI 175

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G F +++  L  M+Q+RVS  ++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 176 INAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 235

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD++ YNT++       L  EA ++   M E G+ PD  +YS L+  + + ++  +  
Sbjct: 236 IQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVS 295

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       D+T+ N++++ Y +L   K+A  +F  M+  G   +  +Y+ LL +Y
Sbjct: 296 ELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLY 355

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+   + +   LF  M+    + +  TYN +I+++G+    ++   L  +M    +EPN 
Sbjct: 356 GKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNM 415

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY  +I   GK G  + A  +   +   GV      Y  +I A+ +  L   A  + + 
Sbjct: 416 QTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNT 475

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +  + P      + I   AR G  +EA  +  +  ++G  +D+  F  +IE F +  +
Sbjct: 476 MNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQ 535

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           Y   ++ + +M  A   P+   +  VL+ Y      +  ++ + E++  G + S   +  
Sbjct: 536 YEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCM 595

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           ML+LY A+ D   L   +  +D+   +   ++H V+ 
Sbjct: 596 MLALY-AKND--RLNDAYNLIDAMITMRVSDIHQVIG 629



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 230/475 (48%), Gaps = 15/475 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ + +E R SPS+  YN V+    R    WE   GLF EMR  GI PD  TY+TL
Sbjct: 188 SLELLNGMKQE-RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTL 246

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +      G+ D A    + M +  +  D+  YS L++   KL+   K   +   ++  G 
Sbjct: 247 LGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGN 306

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++  + +    KEA  +  +M+  G   +  +YS LLNLY ++ ++ +   
Sbjct: 307 LPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRD 366

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   D  T NI+I V+G+    K+   LF  M +  ++P++ +Y  L+   G
Sbjct: 367 LFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACG 426

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L+ +A  +   M  K +  +   Y  +I+ +G++  +E+A  +   M   G  P   
Sbjct: 427 KGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVE 486

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+++I  + + G    A  +  ++  SG++ D   +  +I A+ + G    A +   E+
Sbjct: 487 TYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEM 546

Query: 361 R----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                +PN +  E  ++I   AG ++E    F++   +G +  +  +  M+ L+++N + 
Sbjct: 547 EKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRL 606

Query: 417 A---NVIEVFEKMRSAGYFPDSH--IIALVLNSYGKLREFETADDLYSEMQEEGC 466
               N+I+    MR +    D H  I  ++   +     ++  + ++ ++  EGC
Sbjct: 607 NDAYNLIDAMITMRVS----DIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGC 657



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 143/326 (43%), Gaps = 36/326 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN++++       ++    LF +M +  + P+  TY  LI   GK G+++ A   
Sbjct: 378 PDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKI 437

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  V      Y+ +IE   + + Y +A+ +F+ +   G  P +  YN++I+ F +
Sbjct: 438 LLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFAR 497

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L+KEA  ++  M E G+K D  S++ ++  + +  ++ EA+  + EM + NC  +  T
Sbjct: 498 GGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELT 557

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR--- 253
              ++ +Y    +  + +  F  ++  GI PSV+ Y  +L +Y + +   +A +L     
Sbjct: 558 LEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMI 617

Query: 254 LMQRKEIEQNVVT---------------------------------YNTMIKIYGKSLEH 280
            M+  +I Q +                                   YN +++      + 
Sbjct: 618 TMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQR 677

Query: 281 EKATNLMQEMQNRGIEPNAITYSTII 306
           E+A  ++ E   RG+ P     S ++
Sbjct: 678 ERAARVLNEASKRGLFPELFRKSKLV 703



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 11/280 (3%)

Query: 225 IDP--SVVSYNTLLRVYGEAELFGE---AIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSL 278
           +DP  + +S N    V+ E    G+   ++ LF+ MQR+   + N   +  MI + G+  
Sbjct: 89  LDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREG 148

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +K   +  EM + G+     +Y+ II  +G+ G+   +  L   ++   V    + Y 
Sbjct: 149 LLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYN 208

Query: 339 TMIVAYERVGL-----VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
           T+I A  R GL     +     + HE  QP+ I   T +   A  G  +EA  VFR   +
Sbjct: 209 TVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNE 268

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G V DI+ +  +++ F +  +   V E+  +M   G  PD     ++L +Y +L   + 
Sbjct: 269 SGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKE 328

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           A  ++ +MQ  GCV +   +  +L+LYG    ++ +  LF
Sbjct: 329 AMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLF 368


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 249/519 (47%), Gaps = 11/519 (2%)

Query: 33  KQWELAHGLFDE-MRQRGIAP--DRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           K+++LA   FD  M+Q+      D    + +I+  GKEG   SA +    +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIE 148
             Y++LI        Y +A+++F +++  G  P L+ YN ++NVFGK    + +   L+E
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +M+  G+ PD  +Y+TL+          EA  VF EM       D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             K+A ++   M   G  PS+V+YN+L+  Y    +  EA+ L   M  K  + +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++  + ++ + E A ++ +EM+N G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIEEA 384
           G+  D V + T++  + + G+ +    +  E+++   +P RET  T++   +R G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             V+R+  DAG   D+S +  ++   +R   +    +V  +M      P+      +L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD-FNMLESLFERLDSDSNIN 503
           Y   +E      L  E+   G +    V  + L L  ++ D     E  F  L       
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
                + +  IY R   +  A+ +++ M K R F  S+ 
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYM-KERGFTPSMA 665



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 233/461 (50%), Gaps = 7/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W     L ++M+  GIAPD YTY+TLITC  +  
Sbjct: 235 EEDGCKPTLITYNVIL-NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +   A    ++M+    S D V Y+ L+++  K     +A+ + + +  +G  P +V YN
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+ + +  +  EA  L  +M E+G KPD  +Y+TLL+ +    K   A+S+F EM   
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C  ++ T N  I +YG      +  ++F  +   G+ P +V++NTLL V+G+  +  E 
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F+ M+R        T+NT+I  Y +    E+A  + + M + G+ P+  TY+T++A 
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY---ERVGLV-AHAKRLLHELRQPN 364
             + G  +++  +  ++     + + + Y +++ AY   + +GL+ + A+ +   + +P 
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +  +T + + ++   + EA   F +  + G   DI+    M+ ++ R +  A    V +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            M+  G+ P       ++  + +  +F  ++++  E+  +G
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 260/526 (49%), Gaps = 5/526 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM- 69
           +E  +S  V++Y  ++     + ++  A  +F +M + G  P   TY+ ++  FGK G  
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           ++   S +++M+ D ++ D   Y+ LI   ++ S + +A  +F  +K++G   D V YN 
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++V+GK+   KEA  ++ EM   G  P  V+Y++L++ Y  +    EA+ +  +M E  
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T   ++  + +    + A  +F  MR  G  P++ ++N  +++YG    F E +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  +    +  ++VT+NT++ ++G++    + + + +EM+  G  P   T++T+I+ +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G  ++A  +++++  +GV  D   Y T++ A  R G+   ++++L E+      P E
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559

Query: 370 -TAITILARAGRIEEATWVFRQAFD--AGEVKDISV-FGCMIELFSRNKKYANVIEVFEK 425
            T  ++L      +E   +   A +  +G ++  +V    ++ + S+          F +
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           ++  G+ PD   +  +++ YG+ +    A+ +   M+E G   S   +  ++ ++    D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F   E +   + +         ++ V   Y R  R+ DASRI + M
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 17/442 (3%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR---VSGD 88
            K W   HGL  + +Q           +LI      G  DS +S L +  +D+    S +
Sbjct: 87  GKPWSY-HGLSPQGQQ--------VLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSE 137

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           L+ +   +   +K     +A   F + K    + D      +I++ GK      A  +  
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFN 197

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            ++E G   D  SY++L++ +  + ++ EA++VF +M E  C   L T N++++V+G++ 
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257

Query: 209 MA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                   L   M+  GI P   +YNTL+       L  EA  +F  M+      + VTY
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N ++ +YGKS   ++A  ++ EM   G  P+ +TY+++I+ + + G LD A  L  ++  
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
            G + D   Y T++  +ER G V  A  +  E+R    +PN       I +    G+  E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              +F +    G   DI  +  ++ +F +N   + V  VF++M+ AG+ P+      +++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497

Query: 444 SYGKLREFETADDLYSEMQEEG 465
           +Y +   FE A  +Y  M + G
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAG 519



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P++  +N  ++      ++     +FDE+   G++PD  T++TL+  FG+ GM DS
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM-DS 471

Query: 73  AISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            +S + ++M++     +   ++ LI    +   + +A++++ R+  +G+ PDL  YNT++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK----------------- 174
               +  +++++  ++ EM +   KP+ ++Y +LL+ Y    +                 
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591

Query: 175 ------------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
                               EA   F+E+ E     D+TT N M+ +YG+  M   A+ +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M++ G  PS+ +YN+L+ ++  +  FG++  + R +  K I+ ++++YNT+I  Y +
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +     A+ +  EM+N GI P+ ITY+T I  +      + A  + + +   G   +   
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ 362
           Y +++  Y ++     AK  + +LR 
Sbjct: 772 YNSIVDGYCKLNRKDEAKLFVEDLRN 797



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 14/294 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF--GKEGM 69
           +A  +P +  YN VL  + R   WE +  +  EM      P+  TY +L+  +  GKE  
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-- 574

Query: 70  FDSAISWLQQMEQDRVSGDL----VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
               I  +  + ++  SG +    VL   L+ +  K     +A   FS LK  G  PD+ 
Sbjct: 575 ----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
             N+M++++G+ ++  +A  +++ M+E+G  P   +Y++L+ ++  +  F ++  +  E+
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  D+ + N +I  Y +    +DA R+F  MR  GI P V++YNT +  Y    +F
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            EAI + R M +     N  TYN+++  Y K    ++A   +++++N  ++P+A
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN--LDPHA 802


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 245/505 (48%), Gaps = 6/505 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L  I E+   SP+VF YN  +       QWE+A  L  EM  R + PD  +Y++ 
Sbjct: 162 KALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSA 221

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   G+ G ++  I  L++M    ++ D + Y+++I    K   + +A+S+ + + + G+
Sbjct: 222 IKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGL 281

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+ ++YN  I   G++  +KEA  ++ +M  QGV PD +SY   +       ++  ++ 
Sbjct: 282 TPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVD 341

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM       +    N  I   G+    + A  L   +  +G+ P   S+N+ +    
Sbjct: 342 LLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACT 401

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           ++  + EA+ L + M  K ++ + ++YN+ I+  GK  + E A  L ++M  +G+ PN I
Sbjct: 402 KSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVI 461

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           + +  I   G+ G+      L +++ + G+  + + Y + I    + G    A  LL ++
Sbjct: 462 SSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKM 521

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           ++    P++I   +AI   ++ GR +EA  + R+    G   D+  +   I+ + +N ++
Sbjct: 522 KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQW 581

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              +E+  +M + G  P+      V+ + G+  E+E A DL  E++E   V  D + + +
Sbjct: 582 ERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETA-VAPDLMSYNL 640

Query: 477 -LSLYGARKDFNMLESLFERLDSDS 500
            +S  G R  +     L   + ++ 
Sbjct: 641 AISACGKRGRWEEALDLLREMPAEG 665



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 216/457 (47%), Gaps = 10/457 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    YN V+    +  QW+ A  +  EM  +G+ P+  +Y+  I   G+ G +  A+ 
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVE 306

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+QME   V+ D++ Y   I+       +  ++ +   +   G+ P+ + +N+ I   G
Sbjct: 307 VLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACG 366

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +++A  L+ E+   G+ PD  S+++ +    ++ ++ EAL +  EM       D  
Sbjct: 367 KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N  I+  G+    + A  L   M   G+ P+V+S N  +R  GE   + E + L R M
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  NV+TYN+ IK  GK  + EKA +L+ +M+   + P++ITY++ IA   K G+ 
Sbjct: 487 PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW 546

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  L +++   G+  D + Y   I AY + G    A  LL ++      PN I   + 
Sbjct: 547 KEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSV 606

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G  E+A  + ++  +     D+  +   I    +  ++   +++  +M + G 
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGL 666

Query: 432 FPD--SHIIAL-VLNSYGKLREFETADDLYSEMQEEG 465
            PD  S+  A+   N+ G   E+E A  L + M   G
Sbjct: 667 TPDVISYTSAIRACNAEG---EWEKALGLLNLMGAHG 700



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 210/446 (47%), Gaps = 41/446 (9%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-E 81
              LR      +W  A G+ DEM++ G+    ++Y+T IT  G++G ++ A+  L+++ E
Sbjct: 114 QAALREAATTGKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPE 172

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           Q+ VS ++  Y++ IE       +  A+S+   +    +VPD ++YN+ I   G+   ++
Sbjct: 173 QEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWE 232

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
               L+ EM   G+ PD ++Y++++    +  ++ EALSV  EM+               
Sbjct: 233 RVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMS--------------- 277

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
                                 G+ P  +SYN  +R  G +  + EA+ + R M+ + + 
Sbjct: 278 --------------------AKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVT 317

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V++Y+  IK  G   + E + +L+ EM  RG+ PN I +++ I   GK G+ ++A  L
Sbjct: 318 PDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVEL 377

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
            +++ + G+  D   + + I A  + G    A  LL E+     +P+ I   +AI    +
Sbjct: 378 LREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGK 437

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G+ E A  + RQ    G   ++      I       ++   +E+  +M + G  P+   
Sbjct: 438 GGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVIT 497

Query: 438 IALVLNSYGKLREFETADDLYSEMQE 463
               + + GK  ++E A DL ++M+E
Sbjct: 498 YNSAIKTCGKGGQWEKALDLLAKMKE 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 189/379 (49%), Gaps = 4/379 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   +N  +    +  QWE A  L  E+   G+ PD  ++++ I    K G +  A+ 
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M   R+  D + Y++ IE   K   +  A+ +  ++ + G+ P++++ N  I   G
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   ++E   L+ +M  QG+ P+ ++Y++ +    +  ++ +AL + A+M E+    D  
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N  I    +    K+A  L   M   G+ P V+SY   +  YG+   +  A+ L R M
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  NV+TYN++IK  G+  E EKA +L++E++   + P+ ++Y+  I+  GK G+ 
Sbjct: 592 PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRW 651

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET----A 371
           + A  L +++ + G+  D + Y + I A    G    A  LL+ +      P  T    A
Sbjct: 652 EEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLA 711

Query: 372 ITILARAGRIEEATWVFRQ 390
           I    + GR EEA  + R+
Sbjct: 712 IEACGKGGRREEAVCLVRE 730



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 158/317 (49%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   +YN  +    +  QWE+A  L  +M  +G+ P+  + +  I   G+ G +   
Sbjct: 420 RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEG 479

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +  L+QM    ++ +++ Y++ I+   K   + KA+ + +++K   + PD + YN+ I  
Sbjct: 480 LELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAA 539

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K   +KEA  L+ EM  QG+ PD +SY+  ++ Y +N ++  A+ +  +M       +
Sbjct: 540 CSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I   G+    + A  L   +++  + P ++SYN  +   G+   + EA+ L R
Sbjct: 600 VITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLR 659

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  + +  +V++Y + I+      E EKA  L+  M   G+ P A +YS  I   GK G
Sbjct: 660 EMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGG 719

Query: 314 KLDRAAMLFQKLRSSGV 330
           + + A  L +++   G+
Sbjct: 720 RREEAVCLVREMAQRGL 736



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 175/347 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P   ++N  +    ++ +W+ A  L  EM  + + PD  +Y++ I   GK G ++ A+ 
Sbjct: 387 TPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALE 446

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             +QM    ++ +++  +  I    +   + + + +  ++ + G+ P+++ YN+ I   G
Sbjct: 447 LRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCG 506

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +++A  L+ +M+E  + PD+++Y++ +    +  ++ EA+++  EM       D+ 
Sbjct: 507 KGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVI 566

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +    ID YG+    + A  L   M   G+ P+V++YN++++  G    + +A+ L + +
Sbjct: 567 SYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKEL 626

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  ++++YN  I   GK    E+A +L++EM   G+ P+ I+Y++ I      G+ 
Sbjct: 627 KETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEW 686

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           ++A  L   + + GV      Y   I A  + G    A  L+ E+ Q
Sbjct: 687 EKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQ 733



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 148/291 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V + N+ +R      +W+    L  +M  +G+ P+  TY++ I   GK G ++ A+ 
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALD 516

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M++  ++ D + Y++ I    K   + +A+++   +   G+ PD+++Y   I+ +G
Sbjct: 517 LLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYG 576

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   ++ A  L+ +M  +G+ P+ ++Y++++       ++ +AL +  E+ E     DL 
Sbjct: 577 KNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLM 636

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N+ I   G+    ++A  L   M   G+ P V+SY + +R       + +A+ L  LM
Sbjct: 637 SYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLM 696

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
               +     +Y+  I+  GK    E+A  L++EM  RG+    I+ S I+
Sbjct: 697 GAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIV 747



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 118/231 (51%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P    YN  +    +  +W+ A  L  EM  +G+ PD  +Y+  I  +GK G +
Sbjct: 522 KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQW 581

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  L+QM    ++ +++ Y+++I+   +  ++ KA+ +   LK + + PDL++YN  
Sbjct: 582 ERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLA 641

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+  GK   ++EA  L+ EM  +G+ PD +SY++ +       ++ +AL +   M     
Sbjct: 642 ISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGV 701

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
               T+ ++ I+  G+    ++A  L   M + G+    +S + ++   G+
Sbjct: 702 SPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGD 752


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 265/521 (50%), Gaps = 11/521 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDSAISWL 77
           V+ Y  ++      K++  A  +F +M++ G  P   TY+ ++  +GK GM +   I+ +
Sbjct: 179 VYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALV 238

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q M+   ++ DL  Y+ LI   R  S Y +A+ +F  +K +G  PD V YN +++V+GK+
Sbjct: 239 QDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKS 298

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +  KEA  ++++M     +P  V+Y++L++ YV      +AL +  +M +     D+ T 
Sbjct: 299 RRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTY 358

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++  +      + A  +F  MRK+G  P++ ++N L+++YG+   F E + +F+ ++ 
Sbjct: 359 TTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKV 418

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
            +   ++VT+NT++ ++G++    + + + +EM+     P   T++T+I+ +G+ G  D+
Sbjct: 419 CKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQ 478

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A   ++++  +GV  D   Y  ++    R GL   ++++L E++     P E   + L  
Sbjct: 479 AMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLH 538

Query: 378 A---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV---FEKMRSAGY 431
           A   GR  E      +   +G +K  +V   +  L   N K   ++E    F + R  G 
Sbjct: 539 AYANGREVERMNALAEEIYSGTIKTHAVL--LKTLVLVNSKVDLLVETERAFLEFRKRGI 596

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD      +L+ YG+ +    A+++ + M E G   S   +  ++ +Y   ++F+  E 
Sbjct: 597 SPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQ 656

Query: 492 LFERLDSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRM 531
           +F  +  D  I    + +++V   Y R + +++A RI+  M
Sbjct: 657 IFREI-LDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEM 696



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 228/464 (49%), Gaps = 15/464 (3%)

Query: 34  QWELAHGLFDEMRQRGIAPDRYTY------STLITCFGKEGMFDSAISWLQQMEQDRVSG 87
           +++LA  LFD +R R    DR +       + +++  GK G    A S L  +E D    
Sbjct: 121 KFDLALSLFDFIRTRN---DRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEV 177

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-FKEARLL 146
           D+  Y++LI        Y  A+ +F ++K  G  P L+ YN ++NV+GK  + + +   L
Sbjct: 178 DVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIAL 237

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           +++M+  G+ PD  +Y+TL++       + EAL +F E+       D  T N ++DVYG+
Sbjct: 238 VQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGK 297

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               K+A  +   M      PSVV+YN+L+  Y    L  +A+ L R M  K I+ +V T
Sbjct: 298 SRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYT 357

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T++  +  + + E A  + +EM+  G +PN  T++ +I ++G  GK +    +F++++
Sbjct: 358 YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIE 382
                 D V + T++  + + G+ +    +  E+++    P      T I+   R G  +
Sbjct: 418 VCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFD 477

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A   +++  +AG   D+S +  ++   +R   +    +V  +M+  G  P+    + +L
Sbjct: 478 QAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           ++Y   RE E  + L  E+   G + +  V  + L L  ++ D 
Sbjct: 538 HAYANGREVERMNALAEEIY-SGTIKTHAVLLKTLVLVNSKVDL 580



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 231/475 (48%), Gaps = 4/475 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +  YN ++        +E A  LF+E++  G  PD  TY+ L+  +GK      A+ 
Sbjct: 247 APDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAME 306

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+QME +     +V Y++L+    +      A+ +  ++   GI PD+  Y T+++ F 
Sbjct: 307 VLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFV 366

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A   + A  + EEMR+ G KP+  +++ L+ +Y +  KF E + VF E+    C  D+ 
Sbjct: 367 NAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIV 426

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++ V+GQ  M  +   +F  M++    P   ++NTL+  YG    F +A+  ++ M
Sbjct: 427 TWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRM 486

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  ++ TYN ++    +    E++  ++ EM++ G +PN +TYS+++  +    ++
Sbjct: 487 LEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREV 546

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           +R   L +++ S  ++   VL +T+++   +V L+   +R   E R+    P+       
Sbjct: 547 ERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAM 606

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           ++I  R   + +A  +    +++G    ++ +  ++ ++SR + +    ++F ++   G 
Sbjct: 607 LSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGI 666

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
            PD     +V+ +Y +    + A  +  EM+    V     +   ++ Y A   F
Sbjct: 667 EPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMF 721



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 230/484 (47%), Gaps = 22/484 (4%)

Query: 37  LAHGLFDEMRQRGIAP---DRYTYSTL-------ITCFGKEGMFDSAISWLQ--QMEQDR 84
           L H  FD  R   I P   D+ + S+L       I   G    FD A+S     +   DR
Sbjct: 79  LIHPSFDSNRFHEILPLLFDQPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDR 138

Query: 85  VS---GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           VS   G ++  + ++ +  K    S+A S+   L++ G   D+  Y ++I  +   K ++
Sbjct: 139 VSLLNGSVI--AVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYR 196

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +A  +  +M+E G +P  ++Y+ +LN+Y +    + + +++  +M       DL T N +
Sbjct: 197 DALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTL 256

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I       + ++A  LF  ++  G  P  V+YN LL VYG++    EA+ + + M+    
Sbjct: 257 ISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSF 316

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VVTYN+++  Y +    E A  L ++M ++GI+P+  TY+T+++ +  AGK + A  
Sbjct: 317 RPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAME 376

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
           +F+++R  G + +   +  +I  Y   G      ++  E++     P+ +   T + +  
Sbjct: 377 VFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFG 436

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G   E + VF +   +    +   F  +I  + R   +   +  +++M  AG  PD  
Sbjct: 437 QNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLS 496

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
               VL +  +   +E ++ + +EM++ GC  ++  +  +L  Y   ++   + +L E +
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEI 556

Query: 497 DSDS 500
            S +
Sbjct: 557 YSGT 560



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 175/348 (50%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            + SP +  +N +L    +        G+F+EM++   AP+R T++TLI+ +G+ G FD 
Sbjct: 419 CKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQ 478

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++  ++M +  VS DL  Y+ ++    +   + ++  + + +K  G  P+ V Y+++++
Sbjct: 479 AMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLH 538

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +   +  +    L EE+    +K   V   TL+ +  +    VE    F E  +     
Sbjct: 539 AYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISP 598

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+TT N M+ +YG+  M   A+ +   M + G+  S+ SYN+L+ +Y   E F ++  +F
Sbjct: 599 DVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIF 658

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R +  K IE +V++YN +I  Y ++   ++A  +++EM+     P+ +TY+T IA +   
Sbjct: 659 REILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAAD 718

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
                A  + + +   G + +   Y +++  Y ++ L   A   +  L
Sbjct: 719 SMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNL 766



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 175/423 (41%), Gaps = 109/423 (25%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+ Y  +L   + A + ELA  +F+EMR+ G  P+  T++ LI  +G  G F+  +  
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKV 412

Query: 77  LQQMEQDRVSGDLVLYSNLI-----------------ELAR------------------K 101
            ++++  + S D+V ++ L+                 E+ R                  +
Sbjct: 413 FKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGR 472

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
              + +A++ + R+  +G+ PDL  YN ++    +  L++++  ++ EM++ G KP+ V+
Sbjct: 473 CGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVT 532

Query: 162 YSTLLNLY--------------------VENHK---------------FVEALSVFAEMN 186
           YS+LL+ Y                    ++ H                 VE    F E  
Sbjct: 533 YSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFR 592

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDA--------------------------------- 213
           +     D+TT N M+ +YG+  M   A                                 
Sbjct: 593 KRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFH 652

Query: 214 --DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             +++F  +   GI+P V+SYN ++  Y   ++  EA  +   M+      +VVTYNT I
Sbjct: 653 KSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFI 712

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y       +A ++++ M  +G +PN  TY++I+  + K    D A    Q L     +
Sbjct: 713 AAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLG----D 768

Query: 332 IDP 334
           +DP
Sbjct: 769 LDP 771



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 136/279 (48%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  SP +  YN VL  + R   WE +  +  EM+  G  P+  TYS+L+  +      +
Sbjct: 488 EAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVE 547

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  +++    +    VL   L+ +  K+    +    F   +  GI PD+   N M+
Sbjct: 548 RMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAML 607

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +++G+ K+  +A  ++  M E G+     SY++L+ +Y     F ++  +F E+ +    
Sbjct: 608 SIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIE 667

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + NI+I  Y + DM  +A R+   M+     P VV+YNT +  Y    +F EAI +
Sbjct: 668 PDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDV 727

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
            R M ++  + N  TYN+++  Y K    ++A + +Q +
Sbjct: 728 IRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNL 766



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 40/228 (17%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRN-VLRAKQWEL---AHGLFDEMRQRGIAPDRYT 56
           R V  ++ + EE  YS ++  + V+L+  VL   + +L       F E R+RGI+PD  T
Sbjct: 544 REVERMNALAEEI-YSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTT 602

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
            + +++ +G++ M   A   L  M +  ++  L  Y++L+ +  +  ++ K+  IF  + 
Sbjct: 603 SNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREIL 662

Query: 117 SSGI-----------------------------------VPDLVAYNTMINVFGKAKLFK 141
             GI                                   VPD+V YNT I  +    +F 
Sbjct: 663 DKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFV 722

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           EA  +I  M +QG KP+  +Y+++++ Y +     EA S    + +++
Sbjct: 723 EAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLD 770


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 235/443 (53%), Gaps = 2/443 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P  F +  ++  +    +   A  L D+M QRG  PD  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A++ L +ME  R+  ++V+++ +I+   K      A+ +F+ +++ GI 
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YN++IN       + +A  L+  M E+ + P+ V+++ L++ + +  K VEA  +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM + +   D  T N++I+ +   +   +A ++F  M      P++ +YNTL+  + +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            +   + + LFR M ++ +  N VTY T+I+ + ++ + + A  + ++M +  +  + +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++      GKLD A ++F+ L+ S +E++  +Y TMI    + G V  A  L   L 
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P+ +   T I+ L     ++EA  +FR+  + G + +   +  +I    R+   A   
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590

Query: 421 EVFEKMRSAGYFPDSHIIALVLN 443
           E+ ++MRS+G+  D+  I+LV N
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTN 613



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 224/463 (48%), Gaps = 17/463 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  ++ +   Y  +LRN L    + + A  LF +M +    P    ++ L++   K   F
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +  IS  +QM+   +S DL  YS  I    + S  S A+++ +++   G  PD+V  +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N +  +K   +A  L+++M E G KPDT +++TL++    ++K  EA+++  +M +  C
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             DL T   +++     G +D+A +   L   M    I  +VV +NT++    +      
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALN---LLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ LF  M+ K I  NVVTYN++I           A+ L+  M  + I PN +T++ +I 
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + K GKL  A  L +++    ++ D + Y  +I  +     +  AK++   +   + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396

Query: 368 R----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
                 T I    +  R+E+   +FR+    G V +   +  +I+ F +     +   VF
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456

Query: 424 EKMRSAGYFPDSHIIALVLN---SYGKLREFETADDLYSEMQE 463
           ++M S     D    +++L+   SYGKL   +TA  ++  +Q+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKL---DTALVIFKYLQK 496



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 187/448 (41%), Gaps = 48/448 (10%)

Query: 98  LARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L  +LSD  K   A+ +F  +  S   P +V +N +++   K   F+    L E+M+  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  D  +YS  +N +    +   AL+V A+M                             
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKM----------------------------- 144

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
                  K+G +P +V+ ++LL  Y  ++   +A+ L   M     + +  T+ T+I  +
Sbjct: 145 ------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI--H 196

Query: 275 GKSLEHEKATN---LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           G  L H KA+    L+ +M  RG +P+ +TY T++    K G +D A  L  K+ ++ ++
Sbjct: 197 GLFL-HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWV 387
            + V++ T+I +  +   V  A  L  E+     +PN +   + I  L   GR  +A+ +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
                +     ++  F  +I+ F +  K     ++ E+M      PD+    L++N +  
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
               + A  ++  M  + C+ + Q +  +++ +   K       LF  +     +     
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRR 535
           +  +   + +A   + A  +  +M   R
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNR 463



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 34/226 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN ++    + K+ E    LF EM QRG+  +  TY+T+I  F + G  DSA   
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS------------------ 118
            +QM  +RV  D++ YS L+           A+ IF  L+ S                  
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515

Query: 119 --------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
                          I PD+V YNTMI+     +L +EA  L  +M+E G  P++ +Y+T
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY--GQLD 208
           L+   + +     +  +  EM       D +T +++ ++   G+LD
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLD 621



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F YN ++  + +A +   A  LF  +    I PD  TY+T+I+    + +   A    
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++D    +   Y+ LI    +  D + +  +   ++SSG V D    + + N+    
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618

Query: 138 KLFK 141
           +L K
Sbjct: 619 RLDK 622


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 230/492 (46%), Gaps = 45/492 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++F Y VV+    RA++ EL    F  + + G+  D+   +T++ C       D A+  
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 77  L-----------------------------QQM---------EQDRVSGDLVLYSNLIEL 98
           L                             QQ          E+   S D+V Y+ +I  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K     KA +++  +   G VPD+V +N++IN   KA+    A LL+ +M + GV P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+Y+++++ Y    ++ EA  +F EM       D+ + N  +D   +   +K+A  +F+
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
           SM   G  P++V+Y  LL  Y     F + +  F  M+   I  N + +  +I  Y K  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A  ++ EMQ +G+ P+  TYST+I+   + G+L  A   F ++  +GV+ + V+Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPR------ETAITILARAGRIEEATWVFRQAF 392
           ++I  +   G +  AK L++E+   N IPR       + +  + + GR+ +A  +F    
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMN-NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           D GE  DI +F  +I+ +    +      V + M SAG  PD+     ++N Y K    +
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 453 TADDLYSEMQEE 464
              +L+ EM ++
Sbjct: 485 DGLNLFREMSDK 496



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 220/511 (43%), Gaps = 44/511 (8%)

Query: 1   RSVAILDWI----NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           RS   LD +     EE   SP V  YN V+    +  +   A  L+ EM Q+G  PD  T
Sbjct: 94  RSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVT 153

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           ++++I    K    D+A   L+QM  + V  + V Y+++I     L  + +A  +F  + 
Sbjct: 154 HNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMT 213

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
             G++PD+V++N+ ++   K    KEA  +   M  +G +P+ V+Y  LL+ Y     F 
Sbjct: 214 GRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFA 273

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           + +S F  M       +     I+ID Y +  M  +A  +   M+  G+ P V +Y+TL+
Sbjct: 274 DMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLI 333

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                     +A+  F  M    ++ N V Y+++I+ +    +  KA  L+ EM N GI 
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393

Query: 297 -PN-----------------------------------AITYSTIIAIWGKAGKLDRAAM 320
            PN                                    I ++T+I  +   G++ +A  
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
           +   + S+G+  D   Y T++  Y + G +     L  E+     +P T+     +  L 
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           RAGR   A  +  +    G    +  +  +++   RN      I +F+K+ +     +  
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            +  ++NS   ++  E A DL+S + + G V
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLV 604



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 199/465 (42%), Gaps = 46/465 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++       +WE A  +F EM  RG+ PD  ++++ +    K G    A   
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M       ++V Y  L+        ++  +S F+ +K  GIV + + +  +I+ + K
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK 303

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +  EA L++ EM+ QG+ PD  +YSTL++      +  +A+  F +M       +   
Sbjct: 304 RGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVV 363

Query: 197 CNIMID---VYGQLDMAKDADRLFWSMRKMGID-PSVVSYNTLLRVYGEAELFGEAIHLF 252
            + +I     +G L  AK+   L + M   GI  P++  +N+++    +     +A H+F
Sbjct: 364 YHSLIQGFCTHGDLVKAKE---LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            L++      +++ +NT+I  Y    E  KA +++  M + GI P+  TY+T++  + K+
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT---IPR- 368
           G++D    LF+++    ++   V Y  ++    R G    A+++LHE+    T   +P  
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540

Query: 369 -----------------------------------ETAITILARAGRIEEATWVFRQAFD 393
                                               T I  +    R EEA  +F    D
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           +G V + S +G MI    +         +F  M  +G  P S ++
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLL 645



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 180/386 (46%), Gaps = 5/386 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++  Y ++L        +      F+ M+  GI  +   ++ LI  + K GM D A+
Sbjct: 252 HRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAM 311

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M+   +S D+  YS LI    ++   + A+  F+++  +G+ P+ V Y+++I  F
Sbjct: 312 LILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGF 371

Query: 135 GKAKLFKEARLLIEEMREQGV-KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                  +A+ L+ EM   G+ +P+   ++++++   +  + ++A  +F  + ++    D
Sbjct: 372 CTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSD 431

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N +ID Y  +     A  +  +M   GI P   +YNTL+  Y ++    + ++LFR
Sbjct: 432 IIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFR 491

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K+I+   VTYN ++    ++     A  ++ EM   G   +  TY+ I+    +  
Sbjct: 492 EMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNN 551

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
             D A ++FQKL +  V+ +     TMI +   V     AK L   +     +P  +   
Sbjct: 552 CTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYG 611

Query: 374 ILAR----AGRIEEATWVFRQAFDAG 395
           I+ R     G +EEA  +F     +G
Sbjct: 612 IMIRNLLKEGSVEEADNMFSSMEKSG 637



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 8/319 (2%)

Query: 155 VKPDTV-SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           V P T+ +Y  ++N      +    L+ F  +       D T  N ++          DA
Sbjct: 3   VAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA 62

Query: 214 DR-LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE--IEQNVVTYNTM 270
            + L   M ++G  P   SY  +L+   +     +A+ L R+M ++E     +VVTYNT+
Sbjct: 63  VKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I  + K  +  KA NL  EM  +G  P+ +T+++II    KA  +D A +L +++  +GV
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             + V Y +MI  Y  +G    A ++  E+      P+ +   + +  L + GR +EA  
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +F      G   +I  +G ++  ++    +A+++  F  M+  G   +  +  +++++Y 
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 447 KLREFETADDLYSEMQEEG 465
           K    + A  + SEMQ +G
Sbjct: 303 KRGMMDEAMLILSEMQGQG 321



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 71/351 (20%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF Y+ ++  + R  +   A   F++M   G+ P+   Y +LI  F   G    A  
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382

Query: 76  WLQQMEQDRVS------------------------------------GDLVLYSNLIELA 99
            + +M  + +                                      D+++++ LI+  
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + +  KA S+   + S+GI PD   YNT++N + K+    +   L  EM ++ +KP T
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V+Y+ +L+      + V A  +  EM  + C                             
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEM--IGC----------------------------- 531

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
               G   S+ +YN +L+         EAI +F+ +    ++ N+ T NTMI        
Sbjct: 532 ----GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
            E+A +L   + + G+ PNA TY  +I    K G ++ A  +F  +  SG 
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 19/274 (6%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I D + +    S  +  +N ++       +   A  + D M   GI PD +TY+TL+  +
Sbjct: 419 IFDLVKDIGERS-DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  D  ++  ++M   ++    V Y+ +++   +      A  +   +   G    L
Sbjct: 478 FKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSL 537

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             YN ++    +     EA ++ +++    VK +  + +T++N      +  EA  +F+ 
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSA 597

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +++     + +T  IMI    +    ++AD +F SM K G  P     N  +R       
Sbjct: 598 ISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRT------ 651

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                    L+++ EI   V   N M K+ GKS+
Sbjct: 652 ---------LLEKGEI---VKAGNYMSKVDGKSI 673


>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
          Length = 665

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 250/531 (47%), Gaps = 30/531 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P    YN ++    RA QW  A  + ++M +  I P R TY+ +I   G  G +
Sbjct: 38  QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DLV ++ ++   +  + YSKAIS F  +K + +  D    N +
Sbjct: 98  KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK--PDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I+   K     EA  L   MRE+  K  PD V+Y+++++ Y    +     ++F  M   
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++   N ++  Y    M ++A  +F  ++K G+ P +VSY +LL  YG +    +A
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M++   + N V+YN +I  YG +   ++A  L+ EM+  GI+P+ ++ ST++A 
Sbjct: 278 REVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA 337

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+  ++ R   + +  RS G++++ V Y + I +Y   G    A  L   +R+ N  P 
Sbjct: 338 CGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397

Query: 369 ETAITIL---------------------------ARAGRIEEATWVFRQAFDAGEVKDIS 401
                IL                            + G++ EA   F     +G   D+ 
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVL 457

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I+ ++    +    ++F++M   G  PD+ I + ++ ++ K  E E    L   M
Sbjct: 458 TYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFM 517

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD-SNINKKELHHVV 511
           +++    + + +F++++     +D+     + E LDS  S+I+   L+HV+
Sbjct: 518 KKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVL 568



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 194/442 (43%), Gaps = 43/442 (9%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y  +I  + +    D A     +M++ R   D  +Y++LI    +   +  AI+I   + 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            + I P    YN +IN  G A  +K+A  L ++M E GV PD V+++ +L+      ++ 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +A+S F  M   N   D  T NI+I                               + L+
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIII-------------------------------HCLV 162

Query: 237 RVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++ G+    GEAI LF  M  +R +   +VVTY +++  Y    + E    +   M   G
Sbjct: 163 KI-GQC---GEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG 218

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           ++PN + Y++++  +   G    A  +F  ++ +G+  D V Y +++ AY R      A+
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            + ++++    +PN +     I     AG ++EA  +  +    G   D+     ++   
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R ++   +  + E  RS G   ++      + SY    ++E A +LY+ M+E   V  D
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN-VKPD 397

Query: 471 QVHFQMLSLYGARKDFNMLESL 492
            V + +L + G+ K     ESL
Sbjct: 398 AVTYNIL-ISGSSKLGKYTESL 418



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 158/394 (40%), Gaps = 61/394 (15%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++AI + I +     P + +Y  +L    R+ Q E A  +F++M++    P++ +Y+ LI
Sbjct: 242 ALAIFNLIKKNG-LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             +G  GM   A+  L +ME+D +  D+V  S L+    +    ++  +I    +S GI 
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGID 360

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL------LNLYVENHKF 175
            + VAYN+ I  +     +++A  L   MRE  VKPD V+Y+ L      L  Y E+ +F
Sbjct: 361 LNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRF 420

Query: 176 VE-----------------ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            E                 A S F+ M +  C  D+ T   +I  Y      K A  LF 
Sbjct: 421 FEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFK 480

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN--------------- 263
            M   GI P  +  ++L+  + +       + L   M++K I  N               
Sbjct: 481 EMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIR 540

Query: 264 --------------------VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
                               V T N ++   GK  + E    L  +M          TY+
Sbjct: 541 DWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYA 600

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            ++      GK  +   + Q +  SGV   P LY
Sbjct: 601 VVLRNLLVVGKWRKYIEVLQWMEDSGVH--PTLY 632



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 9/230 (3%)

Query: 13  ARYSPSV-FAYNVVLRNVLRAKQWEL--AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
            +Y+ S+ F  ++V   V   K+ +L  A   F  M++ G  PD  TY+TLI  +   G 
Sbjct: 412 GKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGG 471

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +  A    ++ME + +  D ++ S+L+E   K  +  + + +   +K   I  +  +Y  
Sbjct: 472 WKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFE 531

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I      + +K A  +IE +          + + +LN   +  K    + +F +M    
Sbjct: 532 IIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSC 591

Query: 190 CPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
             + L+T  +++    V G+    K  + L W M   G+ P++  +  +L
Sbjct: 592 STVGLSTYAVVLRNLLVVGKWR--KYIEVLQW-MEDSGVHPTLYMFQNVL 638


>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 754

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 238/523 (45%), Gaps = 6/523 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + +V +   +   W+ +  LF  M RQ    P+ + Y+ +I+  G+EG+ + +    ++M
Sbjct: 109 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEM 168

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               V   +  Y+ LI    +   Y  ++ +  R+K   + P ++ YNT+IN   +  L 
Sbjct: 169 PTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLN 228

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  EMR +G++PD ++Y+TLLN         EA  VF  MNE     D+TT   
Sbjct: 229 WEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRN 288

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +++ +G+L+  +    L   M   G  P + SYN LL  Y        A+ +FR MQ   
Sbjct: 289 LVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              N VTY+ ++ +YG    ++    L  EM+    EP+  TY+ +I ++G+ G      
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVV 408

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL---- 375
            LF  +    VE +   Y+ +I A  + GL   AK++L  + +   +P   A T +    
Sbjct: 409 TLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAY 468

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +A   EEA  +F    + G    +  +  +I +F+R   Y     +  KM  +G   D 
Sbjct: 469 GQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDR 528

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                V+  Y +  +FE A   Y E+++      ++    +LS+Y      +  E  F  
Sbjct: 529 DSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFRE 588

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFN 538
           + +   +     + ++  +Y R+NR +DA  +++ M   +  N
Sbjct: 589 IRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSN 631



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 232/471 (49%), Gaps = 7/471 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ + +E + +PS+  YN V+ +  R    WE    LF EMR  GI PD  TY+TL
Sbjct: 196 SLELLERMKKE-KVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTL 254

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +      G+ D A    + M +  +  D+  Y NL+E   KL+   K   +   ++SSG 
Sbjct: 255 LNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGN 314

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++  +      + A  +  +M+E    P+ V+YS LLNLY  + ++ +   
Sbjct: 315 LPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRE 374

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   D+ T N++I+V+G+    K+   LF  M +  ++P++ +Y  L+   G
Sbjct: 375 LFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACG 434

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L  +A  +   M  K I  +   Y  +I+ YG++  +E+A  +   M   G +P   
Sbjct: 435 KGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVE 494

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+++I ++ + G    +  +  K+  SGV  D   +  +I  Y + G    A +   EL
Sbjct: 495 TYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVEL 554

Query: 361 R----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                QP+    E  +++   AG ++E+   FR+   +G +  +  +  MI +++R+ ++
Sbjct: 555 EKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRW 614

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNS-YGKLREFETADDLYSEMQEEGC 466
            +  EV ++M +        ++  ++   Y     ++  + ++ ++  EGC
Sbjct: 615 DDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGC 665



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 242/548 (44%), Gaps = 70/548 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    E +  +F+EM   G+    ++Y+ L
Sbjct: 124 RSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTAL 183

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-ELARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G ++ ++  L++M++++V+  ++ Y+ +I   AR   ++   +S+F+ ++  G
Sbjct: 184 INSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEG 243

Query: 120 IVPDLVAYNTMIN-----------------------------------VFGKAKLFKEAR 144
           I PD++ YNT++N                                    FGK    ++  
Sbjct: 244 IQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVS 303

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            L++EM   G  PD  SY+ LL  Y        A+ VF +M E  C  +  T ++++++Y
Sbjct: 304 ELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLY 363

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           G      D   LF  M+    +P V +YN L+ V+GE   F E + LF  M  + +E N+
Sbjct: 364 GGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNM 423

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            TY  +I   GK   HE A  ++  M  +GI P+   Y+ +I  +G+A   + A ++F  
Sbjct: 424 GTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNT 483

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           +   G                                +P      + I + AR G  +E+
Sbjct: 484 MNEMG-------------------------------SKPTVETYNSLINMFARGGLYKES 512

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  +  ++G  +D   F  +IE + +  ++   I+ + ++  A + PD      VL+ 
Sbjct: 513 EAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSV 572

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINK 504
           Y      + +++ + E++  G + S   +  M+++Y AR   N  +  +E LD       
Sbjct: 573 YCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVY-ARS--NRWDDAYEVLDEMVTNKV 629

Query: 505 KELHHVVA 512
             +H VV 
Sbjct: 630 SNIHQVVG 637



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 186/421 (44%), Gaps = 23/421 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EAR  P+   Y+++L       +++    LF EM+     PD  TY+ LI  FG+ G F
Sbjct: 345 QEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYF 404

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              ++    M ++ V  ++  Y  LI    K   +  A  I   +   GIVP   AY  +
Sbjct: 405 KEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGV 464

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G+A  ++EA ++   M E G KP   +Y++L+N++     + E+ ++  +M E   
Sbjct: 465 IEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGV 524

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  + N +I+ Y Q    ++A + +  + K    P   ++  +L VY  A L  E+  
Sbjct: 525 ARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEE 584

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR ++   I  +V+ Y  MI +Y +S   + A  ++ EM    +       S I  + G
Sbjct: 585 QFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKV-------SNIHQVVG 637

Query: 311 KAGKLD--------RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           K  K D            +F KL S G  +    Y T++ A   +G    A R+L E  +
Sbjct: 638 KMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIK 697

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF-GCMIELFSRNKKYANVIE 421
               P       L R  ++  +  V R  ++ G    ISV+   M E+F + +   +V  
Sbjct: 698 RGLFPE------LFRKSKLVWSVDVHRM-WEGGACTAISVWLNNMHEMFLKGEDLPHVAS 750

Query: 422 V 422
           V
Sbjct: 751 V 751


>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
 gi|224029903|gb|ACN34027.1| unknown [Zea mays]
 gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
          Length = 819

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 6/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P+   YN ++    RA QW  A  + D+M++  I P R TY+ +I   G  G +
Sbjct: 180 QEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNW 239

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DL+ ++ ++   +  + YSKAI+ F  +KSS + PD    N +
Sbjct: 240 KKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIV 299

Query: 131 INVFGKAKLFKEARLLIEEMREQ--GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I+   K  L+ EA  L   MRE+     PD V+Y++++  Y    +     +VF  M   
Sbjct: 300 IHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAE 359

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ + N ++  Y    M  +A   F  +++ G+ P +VSY +LL  YG +    +A
Sbjct: 360 GVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKA 419

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M++   + N V+YN +I  YG +   ++A +L+ EM+  GI+P+ I+ ST++  
Sbjct: 420 REVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTA 479

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+  +L +  ++    +S G++++ V Y + I +Y  +G    A  L   +R  N  P 
Sbjct: 480 CGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPD 539

Query: 369 ETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                IL     + GR  E+   F    D        V+  +I  + +  K       F 
Sbjct: 540 AVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFN 599

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            M+  G FPD      ++ +Y     +  A DL+ EM+  G
Sbjct: 600 SMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNG 640



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 230/483 (47%), Gaps = 9/483 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +  W+  +  Y      Y +++R   R  + + A GLF EM++    P+  TY++LI
Sbjct: 136 AVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLI 195

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G +  AI+ +  M++  +      Y+N+I       ++ KA+ +  ++  +G+ 
Sbjct: 196 HAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVG 255

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDL+ +N +++ F     + +A    E M+   V PDT + + +++  V+   + EA+ +
Sbjct: 256 PDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIEL 315

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           F  M E    C  D+ T   ++  Y     A++   +F  M   G+ P++VSYN LL  Y
Sbjct: 316 FNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAY 375

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA+  F+L+++  +  ++V+Y +++  YG+S + EKA  +  EM+    +PN 
Sbjct: 376 ASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK 435

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ++Y+ +I  +G AG L  A  L  ++   G++ D +   T++ A  R   +     +L  
Sbjct: 436 VSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAA 495

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNK 414
            +    Q NT+   + I      G  ++A  V   +  AG VK D   +  +I    +  
Sbjct: 496 AKSRGIQLNTVAYNSGIGSYLSLGDYKKAL-VLYTSMRAGNVKPDAVTYNILISGSCKLG 554

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           +Y   ++ FE M          + + V+ SY K  +   A   ++ M+E GC F D + +
Sbjct: 555 RYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGC-FPDVLTY 613

Query: 475 QML 477
             L
Sbjct: 614 TTL 616



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 195/430 (45%), Gaps = 39/430 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +Y  +L    R+ Q E A  +F+EMR+    P++ +Y+ LI  +G  GM   AIS 
Sbjct: 398 PDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISL 457

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +MEQD +  D++  S L+    +    +K   I +  KS GI  + VAYN+ I  +  
Sbjct: 458 LHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLS 517

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K+A +L   MR   VKPD V+Y+ L++   +  ++VE+L  F +M ++N  L    
Sbjct: 518 LGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEV 577

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  Y +     +A   F SM++ G  P                             
Sbjct: 578 YSSVICSYVKQGKLTEAASTFNSMKETGCFP----------------------------- 608

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 +V+TY T+IK Y       +A +L +EM+N G +P+AI  S+++    K G+ +
Sbjct: 609 ------DVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPE 662

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-NTIPRET---AI 372
           R   L + ++   ++++   Y  +I +   +     A +++  L    ++I   T    +
Sbjct: 663 RVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHIL 722

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR E    +F +   +     +S +  ++       K+   +EV + M  AG  
Sbjct: 723 NFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGVC 782

Query: 433 PDSHIIALVL 442
           P  ++   VL
Sbjct: 783 PTLYMYQSVL 792



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR--GIAPDRYTYSTLITCFGK 66
           I + ++ +P     N+V+  +++   +  A  LF+ MR+R     PD  TY++++  +  
Sbjct: 283 IMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSV 342

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  ++  +    M  + V  ++V Y+ L+        +++A+  F  LK +G+ PD+V+
Sbjct: 343 CGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVS 402

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y +++N +G++   ++AR +  EMR+   KP+ VSY+ L++ Y       EA+S+  EM 
Sbjct: 403 YTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME 462

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +     D+ + + ++   G+       D +  + +  GI  + V+YN+ +  Y     + 
Sbjct: 463 QDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYK 522

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A+ L+  M+   ++ + VTYN +I    K   + ++    ++M +  I      YS++I
Sbjct: 523 KALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVI 582

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
             + K GKL  AA  F  ++ +G   D + Y T+I AY   G    A  L  E+     Q
Sbjct: 583 CSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQ 642

Query: 363 PNTIPRETAITILARAGRIE 382
           P+ I   + +  L + G+ E
Sbjct: 643 PDAIVCSSLMEALNKGGQPE 662


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 253/510 (49%), Gaps = 20/510 (3%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD+ ++  E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++  
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 64  FGKEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             K+G   SA++ L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           DL  YN+MI  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY 348

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM       +  T N MID + + D    A+ +F+ M   G  P V ++ TL+  Y  A
Sbjct: 349 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +   + + L   M R+ +  N VTYNT+I  +    +   A +L Q+M + G+ P+ +T 
Sbjct: 409 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 468

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVA 351
           +T++      GKL  A  +F+ ++ S           GVE D + Y  +I      G   
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 528

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A+ L  E+      P+TI   + I  L +  R++EAT +F          ++  F  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             + +  +  + +E+F +M   G   D+ I   ++  + K+     A D++ EM   G V
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG-V 647

Query: 468 FSDQVHFQ-MLSLYGARKDFNMLESLFERL 496
           + D +  + ML+ + ++++     ++ E L
Sbjct: 648 YPDTITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 259/550 (47%), Gaps = 24/550 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+  F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITY+++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F  + + G   D   + T+I  Y     +     LLHE+ +     NT+ 
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I      G +  A  + +Q   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 428 SA-----------GYFPDS---HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +           G  PD    +I+   L + GK  E   A++LY EM   G V     +
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE---AEELYEEMPHRGIVPDTITY 549

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             M+     +   +    +F  + S S + N    + ++ G Y +A R++D   +   M 
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING-YCKAGRVDDGLELFCEMG 608

Query: 533 KRRTFNSSLV 542
           +R     +++
Sbjct: 609 RRGIVADAII 618



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 224/478 (46%), Gaps = 54/478 (11%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN+MI+ F K      A  +   M  +G  PD  +++TL++ Y    +  + + +
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM       +  T N +I  +   G L+ A D   L   M   G+ P +V+ NTLL  
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD---LSQQMISSGVCPDIVTCNTLLDG 474

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F+ MQ+ +           +E +V+TYN +I      GK LE E+  
Sbjct: 475 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-- 532

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 533 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            + G                               R+++   +F +    G V D  ++ 
Sbjct: 592 CKAG-------------------------------RVDDGLELFCEMGRRGIVADAIIYI 620

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +I  F +       +++F++M S+G +PD+  I  +L  +    E E A  +  ++Q
Sbjct: 621 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/472 (21%), Positives = 194/472 (41%), Gaps = 42/472 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    +V +  L+ +  ++      IS++ +++   I  D+ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  F        A     ++ + G+ PD V+++TLL+      +  EAL  F +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE-- 177

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                TTC                             P+VV++ TL+          EA+
Sbjct: 178 -----TTCR----------------------------PNVVTFTTLMNGLCREGRIVEAV 204

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAITYSTIIAI 308
            L   M    ++   +TY T++    K  +   A NL+++M+    I PN + YS II  
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             K G+   A  LF +++  G+  D   Y +MIV +   G  + A++LL E+ +    P+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     I    + G+  EA  ++ +    G + +   +  MI+ F +  +     ++F 
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 384

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M + G  PD      +++ Y   +  +   +L  EM   G V +   +  ++  +    
Sbjct: 385 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444

Query: 485 DFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           D N    L +++ S     +    + ++ G+ +   +L DA  +   M K +
Sbjct: 445 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG-KLKDALEMFKAMQKSK 495



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 149/338 (44%), Gaps = 5/338 (1%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + NI+I  +        A   F  + K+G+ P VV++ TLL      +   EA+  F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            G  P++     +++ + K    + A+D++  M  +GC
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 391


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 236/472 (50%), Gaps = 17/472 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V A+  ++  + R  +   A  L D M + G+ P++ TY T++    K G   SA++ 
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234

Query: 77  LQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L++ME+  R+  ++V+YS +I+   K    + A ++FS ++  GI P+L  YN MIN F 
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +  + EA+ L+ EM E+ + PD V++S L+N  V+  KF EA  ++ EM       +  
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N MID + + +    A+R+F+ M   G  P V++++ L+  Y  A+   + + L   M
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R+ +  N +TY T+I  + +      A +L+QEM + G+ PN +T +T++      GKL
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474

Query: 316 DRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
             A  +F+ ++ S            VE D   Y  +I      G  + A+ L  E+    
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI   + I  L +  R++EAT +F      G   D+  F  +I  + +  +  + +
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGL 594

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           EVF +M   G   ++     +++ + ++     A D++ EM   G V+ D +
Sbjct: 595 EVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSG-VYPDTI 645



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 201/413 (48%), Gaps = 15/413 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +R  P+V  Y+ ++  + +  +   A  LF EM+++GI+P+ +TY+ +I
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   L++M + ++S D+V +S LI    K   + +A  +++ +   GI+
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN+MI+ F K      A  +   M  +G  PD +++S L++ Y    +  + + +
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM+      +  T   +I  + QL     A  L   M   G+ P+VV+ NTLL     
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 242 AELFGEAIHLFRLMQRK-----------EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
                +A+ +F++MQ+            ++E +V TYN +I       +  +A  L +EM
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEM 530

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            +RG+ P+ ITY+++I    K  +LD A  +F  + S G   D V + T+I  Y +VG V
Sbjct: 531 PHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRV 590

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
                +  E+ +     N I   T I    + G I  A  +F++   +G   D
Sbjct: 591 GDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 241/538 (44%), Gaps = 20/538 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  P V  +  +L  V+R ++ ++   L  +M  R I  + Y+++ LI CF        
Sbjct: 70  SRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPF 129

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +      LV +S L+         S+A+  F ++      P+++A+ T++N
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMN 185

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CP 191
              +     EA  L++ M E G++P+ ++Y T+++   +    V AL++  +M EV+   
Sbjct: 186 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIK 245

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P++ +YN ++  +  +  + EA  L
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M  +++  +VVT++ +I    K  +  +A  L  EM  RGI PN ITY+++I  + K
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F  + + G   D + +  +I  Y     V    +LLHE+ +     NTI 
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    + G +  A  + ++   +G   ++     +++    N K  + +E+F+ M+
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +              PD     +++       +F  A++LY EM   G V     +  +
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S            +   Y +  R+ D   +   M +R
Sbjct: 546 IDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 149/314 (47%), Gaps = 13/314 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++    +  + + A  +F  M  +G +PD  T+S LI  +      D  +  
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M +  +  + + Y+ LI    +L + + A+ +   + SSG+ P++V  NT+++    
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 137 AKLFKEARLLIEEMREQ-----------GVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
               K+A  + + M++             V+PD  +Y+ L+   +   KF EA  ++ EM
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEM 530

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  D  T N +ID   +     +A ++F SM   G  P VV++ TL+  Y +    
Sbjct: 531 PHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRV 590

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G+ + +F  M R+ I  N +TY T+I  + +      A ++ QEM + G+ P+ IT   +
Sbjct: 591 GDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650

Query: 306 I-AIWGKAGKLDRA 318
           +  +W K  +L RA
Sbjct: 651 LTGLWSKE-ELKRA 663



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 15/404 (3%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D AI     M + R    ++ +  L+ +  ++      IS+  +++   I  ++ ++  
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  F        A     ++ + G  P  V++STLL+      +  EAL  F ++    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++     +++   +     +A  L   M + G+ P+ ++Y T+  V G  ++ G+ +
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI--VDGMCKM-GDTV 229

Query: 250 HLFRLMQRKE----IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
               L+++ E    I+ NVV Y+ +I    K      A NL  EMQ +GI PN  TY+ +
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           I  +  +G+   A  L +++    +  D V +  +I A  + G    A+ L +E+     
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PNTI   + I   ++  R++ A  +F      G   D+  F  +I+ +   K+  + ++
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +  +M   G   ++     +++ + +L     A DL  EM   G
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/359 (19%), Positives = 149/359 (41%), Gaps = 36/359 (10%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA  LF  M +    P V+ +  LL V    E     I L R M+ + I  N+ ++  +I
Sbjct: 59  DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILI 118

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYST-------------------------II 306
           K +    +   A +   ++   G  P+ +T+ST                         +I
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVI 178

Query: 307 AI------WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           A         + G++  A  L  ++   G++ + + Y T++    ++G    A  LL ++
Sbjct: 179 AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 238

Query: 361 RQ-----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            +     PN +     I  L + GR  +A  +F +  + G   ++  + CMI  F  + +
Sbjct: 239 EEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGR 298

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           ++    +  +M      PD    ++++N+  K  +F  A++LY+EM   G + +   +  
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNS 358

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           M+  +  +   +  E +F  + +           ++   Y  A R++D  ++++ M++R
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417


>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Cucumis sativus]
          Length = 707

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 241/532 (45%), Gaps = 48/532 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P V  YN ++    RA QW  A  + ++M +  I P R T++ LI   G  G +
Sbjct: 57  QKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNW 116

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M  + V  DLV ++ ++   +  + YSKA+S F  +K + I PD    N +
Sbjct: 117 REALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIV 176

Query: 131 INVFGKAKLFKEARLLIEEMREQ--GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I+   K K + +A  +   MRE+    +PD V+++++++LY    +  +  +VF+ M   
Sbjct: 177 IHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAE 236

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ + N +I  Y    M K+A  +F  M++ G  P VVSY +L+  +G ++    A
Sbjct: 237 GIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARA 296

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F +M+R + + N+V+YN ++  YG +    +A ++++EM+  GI PN ++  T++A 
Sbjct: 297 REVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAA 356

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+ G+      +       G+ ++ +   + I +Y  +G    A  L   +    T P 
Sbjct: 357 CGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPD 416

Query: 369 ETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
               TIL     R  + EEA   F++  D        ++  MI  +S+  +      +F 
Sbjct: 417 SVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFN 476

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ---------------------- 462
            ++ +G  PD      ++N+Y     +E    LY EM+                      
Sbjct: 477 SLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGN 536

Query: 463 -------------EEGCVFSDQVHFQMLSLYGARKDF-------NMLESLFE 494
                        E+G  F+D   F+MLS     +D+       N++E  F 
Sbjct: 537 QASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFH 588



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 256/534 (47%), Gaps = 11/534 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
            V + DW+  +  Y      YN+++R   R  + + A GLF EM++    PD  TY+ LI
Sbjct: 13  CVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALI 72

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              G+ G +  A + ++ M +  +      ++NLI       ++ +A+ +  ++  +G+ 
Sbjct: 73  NAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVG 132

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDLV +N +++ +     + +A    E M+   ++PDT + + +++  ++  ++ +A+ +
Sbjct: 133 PDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEI 192

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           F+ M E    C  D+ T   +I +Y      +D   +F +M   GI P++VSYN L+  Y
Sbjct: 193 FSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAY 252

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA  +F  M+R     +VV+Y ++I  +G+S +  +A  +   M+    +PN 
Sbjct: 253 ASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNL 312

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH- 358
           ++Y+ ++  +G  G L +A  + +++   G+  + V   T++ A  R G   +   +L  
Sbjct: 313 VSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSA 372

Query: 359 -ELR--QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            ELR    NTI   +AI      G  E+A  ++R   +     D   F  +I    R  K
Sbjct: 373 AELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSK 432

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           Y   +  F++M        S I + ++ +Y K  +   A+ L++ ++  GC      +  
Sbjct: 433 YEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTA 492

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA-NRLNDASRIM 528
           M++ Y A + +  + +L++ +++    N  +L  +      +A N+ N AS ++
Sbjct: 493 MINAYSASEMWEKVCALYQEMEA----NNIQLDSIACSALMKAFNKGNQASNVL 542



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 147/315 (46%), Gaps = 14/315 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +  A N  + + +   ++E A  L+  M  +   PD  T++ LI+   +   ++ A+ + 
Sbjct: 381 NTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFF 440

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M   R+     +YS++I    K     KA S+F+ LK SG  PDLV Y  MIN +  +
Sbjct: 441 KEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSAS 500

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD---- 193
           +++++   L +EM    ++ D+++ S L+  + + ++    L +   M E   P +    
Sbjct: 501 EMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANF 560

Query: 194 ---LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L+ C+I+ D     D+    +  F  +       S+ + N LL+  G++      I 
Sbjct: 561 FEMLSACSILRDWRKATDLINLMEPSFHLV-------SLGTINHLLQFLGKSGKTEIMIK 613

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF          N+ TY+ ++K    + +  K   ++Q M + GI+P+   Y+ I+    
Sbjct: 614 LFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFFAQ 673

Query: 311 KAGKLDRAAMLFQKL 325
             G  + AA++ +++
Sbjct: 674 HCGDAEYAAVIKERV 688



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 153/362 (42%), Gaps = 35/362 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y  ++    R++Q   A  +FD M++    P+  +Y+ L+  +G  G    A+
Sbjct: 273 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 332

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARK--------------------------------- 101
             L++MEQD +  ++V    L+    +                                 
Sbjct: 333 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSY 392

Query: 102 --LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + +Y KAI+++  +++    PD V +  +I+   +   ++EA    +EM +  +   +
Sbjct: 393 MNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSS 452

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             YS+++  Y +  + V+A S+F  +    C  DL T   MI+ Y   +M +    L+  
Sbjct: 453 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQE 512

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M    I    ++ + L++ + +       + L  +M+ K I  N   +  M+       +
Sbjct: 513 MEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRD 572

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             KAT+L+  M+      +  T + ++   GK+GK +    LF +  + G  ++   Y  
Sbjct: 573 WRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSI 632

Query: 340 MI 341
           ++
Sbjct: 633 LL 634



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 144/343 (41%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V +   +L    R  Q      +      RGI  +    ++ I  +   G +
Sbjct: 339 EQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEY 398

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + AI+  + ME      D V ++ LI    ++S Y +A+  F  +    I      Y++M
Sbjct: 399 EKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSM 458

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  + K     +A  L   ++  G  PD V+Y+ ++N Y  +  + +  +++ EM   N 
Sbjct: 459 ICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNI 518

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD   C+ ++  + + + A +   L   M++ GI  +  ++  +L        + +A  
Sbjct: 519 QLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATD 578

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L  LM+      ++ T N +++  GKS + E    L       G   N  TYS ++    
Sbjct: 579 LINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLL 638

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            AGK  +   + Q +  +G++    +Y  ++   +  G   +A
Sbjct: 639 SAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFFAQHCGDAEYA 681


>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 863

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 263/579 (45%), Gaps = 43/579 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    +    +FDEM  +G++   ++Y+ L
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G +++++  L +M+ D++S  ++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242

Query: 120 IVPDLVAYNTMIN-----------------------------------VFGKAKLFKEAR 144
           I PD+V YNT+++                                    FGK +  ++  
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVS 302

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            L+ EM   G  PD  SY+ LL  Y ++    EA+ VF +M    C  +  T +++++++
Sbjct: 303 DLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           GQ     D  +LF  M+    DP   +YN L+ V+GE   F E + LF  M  + IE ++
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            TY  +I   GK   HE A  ++Q M    I P++  Y+ +I  +G+A   + A + F  
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-----ETAITILARAG 379
           +   G       Y +++ ++ R GLV  ++ +L  L   + IPR        I    + G
Sbjct: 483 MHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVD-SGIPRNRDTFNAQIEAYKQGG 541

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           + EEA   +     +    D      ++ ++S  +      E FE+M+++   P      
Sbjct: 542 KFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYC 601

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDS 498
           ++L  YGK   ++  ++L  EM         QV  QM+   Y    ++ ++E + ++L+S
Sbjct: 602 MMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNS 661

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           +        ++ +        +   A+R++N   KR  F
Sbjct: 662 EGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 252/558 (45%), Gaps = 44/558 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           S+  + +V +       W+ +  LF  M RQ    P+ + Y+ +I+  G+EG+ D  +  
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    VS  +  Y+ LI    +   Y  ++ +  R+K+  I P ++ YNT+IN   +
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACAR 223

Query: 137 AKLFKEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
             L  E  L L  EMR +G++PD V+Y+TLL+         EA  VF  MN+     DLT
Sbjct: 224 GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +++ +G+L   +    L   M   G  P + SYN LL  Y ++    EA+ +F  M
Sbjct: 284 TYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           Q      N  TY+ ++ ++G+S  ++    L  EM++   +P+A TY+ +I ++G+ G  
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT-- 373
                LF  +    +E D   Y+ +I A  + GL   A+++L  +   + +P   A T  
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463

Query: 374 -------------------------------------ILARAGRIEEATWVFRQAFDAGE 396
                                                  AR G ++E+  +  +  D+G 
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGI 523

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
            ++   F   IE + +  K+   ++ +  M  +   PD   +  VL+ Y   R  +   +
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECRE 583

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD--SNINKKELHHVVAGI 514
            + EM+    + S   +  ML++YG  + ++ +  L E + S+  SNI++  +  ++ G 
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQV-IGQMIKGD 642

Query: 515 YERANRLNDASRIMNRMN 532
           Y+  +       +++++N
Sbjct: 643 YDDDSNWQIVEYVLDKLN 660


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 231/470 (49%), Gaps = 6/470 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYST 59
           R+VAI + +NE    SP++  YNV+L    +  + W    GL DEMR +G+  D +T ST
Sbjct: 227 RAVAIFEKMNESG-LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCST 285

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           +I+  G+EG+ D A  +   ++    +   V Y+ L+++  K   YS+A+SI   ++ + 
Sbjct: 286 VISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNN 345

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD V YN ++  + +A  ++E   LI+ M E G+KP+ V+Y+T++N Y    +  +AL
Sbjct: 346 CPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKAL 405

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           S++ +M E  C  ++ T N ++ + G+   +++  ++   M+  G  P+ +++NT+L + 
Sbjct: 406 SLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMC 465

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G   +      +F+ M+    E +  T+NT+I   G+      A  +  EM   G  P+ 
Sbjct: 466 GNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSV 525

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+ ++    + G    A  + + +++ G +     Y  ++ +Y + G V    R+  +
Sbjct: 526 ATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKD 585

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKK 415
           +   +  P    +  L  A     A     +AF A    G   D+ VF  M+ +FSR   
Sbjct: 586 IYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNM 645

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    E+   ++  G  PD      +++ Y +  E   A+++  E+Q  G
Sbjct: 646 HDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSG 695



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 208/428 (48%), Gaps = 32/428 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A  ++ R + R  Q  +A  LFD +     + D   Y+T++  + + G ++ A++  ++M
Sbjct: 176 AVELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKM 235

Query: 81  EQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
            +  +S  LV Y+ ++++  K+   ++K + +   ++S G+  D    +T+I+  G+  L
Sbjct: 236 NESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGL 295

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA+     ++ QG  P TV+Y+ LL ++ +   + EALS+  EM + NCP D  T N 
Sbjct: 296 LDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNE 355

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  Y +    ++   L  +M + GI P+ V+Y T++  YG A    +A+ L+  M+   
Sbjct: 356 LVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              NV TYN ++ + GK  + E+   ++ +M+  G  PN IT++T++++ G  G      
Sbjct: 416 CAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVK 475

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            +FQ+++S G E D   + T+I A  R G    A+++  E+                   
Sbjct: 476 RVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEM------------------- 516

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                        +AG    ++ +  ++   +R   +     V + M++ G+ P     +
Sbjct: 517 ------------LEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYS 564

Query: 440 LVLNSYGK 447
           L+LNSY K
Sbjct: 565 LILNSYAK 572



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/487 (21%), Positives = 217/487 (44%), Gaps = 36/487 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
             A++D + E     P+   Y  ++    RA Q + A  L+D+M++ G AP+  TY+ ++
Sbjct: 369 GAALIDTMTENG-IKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAIL 427

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GK+   +  +  L  M+ D  + + + ++ ++ +      +     +F  +KS G  
Sbjct: 428 GMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFE 487

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD   +NT+I   G+     +A  + +EM E G  P   +Y+ LLN       +  A SV
Sbjct: 488 PDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESV 547

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             +M         T+ +++++ Y +    K  +R+   +    I PS +   TL+    +
Sbjct: 548 IKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFK 607

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                     F+ +Q+   + ++V +N+M+ ++ +   H++A  +M  +Q  G++P+ +T
Sbjct: 608 CRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVT 667

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y++++ ++ + G+  +A  + ++L++SG + D + Y T+I  + R GL+  A R L E+ 
Sbjct: 668 YNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM- 726

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
                        ++R  R                   I  +   +  ++    +A + E
Sbjct: 727 -------------ISRGIR-----------------PCIVTYNTFVGGYAAKGMFAEIDE 756

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           V   M      P+     +V++ Y K ++F+ A D  S + +      D   +Q +    
Sbjct: 757 VLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD----IDDSFDYQSMRRLS 812

Query: 482 ARKDFNM 488
           +R   NM
Sbjct: 813 SRVRENM 819



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 42/359 (11%)

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           L K  +LL+  ++EQ +          LN + E+ KF        E+ +V+         
Sbjct: 103 LSKRGKLLLNSIKEQPLGG--------LNDFFESCKF--------ELFQVD--------- 137

Query: 199 IMIDVYGQLDMAKDADR---LF-WSMRKMG-----IDPSVVSYNTLLRVYGEAELFGEAI 249
            +I V   LD++ D +R   LF W +  +G     +D   V    + R+ G       A 
Sbjct: 138 -LIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVEL--MARILGRESQHSIAS 194

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF ++   +   +V  Y T++  Y +  ++E+A  + ++M   G+ P  +TY+ ++ ++
Sbjct: 195 KLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVY 254

Query: 310 GKAGK-LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           GK G+  ++   L  ++RS G+  D     T+I A  R GL+  AK     L+     P 
Sbjct: 255 GKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPG 314

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T+     + +  +AG   EA  + ++  D     D   +  ++  + R   Y     + +
Sbjct: 315 TVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALID 374

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            M   G  P++     ++N+YG+  + + A  LY +M+E GC  +   +  +L + G +
Sbjct: 375 TMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKK 433


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 226/455 (49%), Gaps = 4/455 (0%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P+V  Y  ++  + +A + + A  L  EM ++G  P   TYS+L+  F K    + ++S 
Sbjct: 561  PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +M +     D+  YS +I    K  D  +A+ +F R+K  G+ P L  Y T+++   K
Sbjct: 621  FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +    A  +  E++E  + PDT  Y+ ++N  V++++  EA  +   M   N   DL T
Sbjct: 681  DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
               ++D  G+    ++A  +F  M + G +P VV+Y +L+ V G+      A+ +FR M 
Sbjct: 741  YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +K    +VVTY+++I   GK    E+A    +   ++G  PN   YS++I  +GK G +D
Sbjct: 801  KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860

Query: 317  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            RA  LF++++      + V Y  ++    + G +  A++LL E+ +   +P      IL 
Sbjct: 861  RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920

Query: 376  ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                + G ++EA   F++  + G V D+  F  +IE   +  K     E+F+ M   GY 
Sbjct: 921  DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYN 980

Query: 433  PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            P      ++++  G+  +   A  ++ EM+ +GC+
Sbjct: 981  PSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCM 1015



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 253/518 (48%), Gaps = 41/518 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN+++  + +A +   A  LF +++++G  PD +TY+TLI   GK G  D  ++ 
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 77  LQQMEQDRVSGDLVL-------YSNLIELARKLSDYS----------------------- 106
           +++M +    G+ ++       +   IE A +  +Y                        
Sbjct: 485 IKEMVEK--GGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 107 ---KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
              +A+ +   +K    +P +V Y T+++  GKA    EA  L+ EM +QG +P  V+YS
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           +L+  + +  +  E+LS+F EM    C  D++T +++I+   + D    A  +F  M++ 
Sbjct: 603 SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G++P + +Y TLL    + E    A+ +F  +Q   +  +   YN M+    KS   ++A
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L+  M+N+ I P+  TY++++   GK+G+L+ A  +F K+   G E D V Y +++  
Sbjct: 723 CKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDV 782

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
             + G ++HA  +   + +    P+ +   + I  L + GR+EEA + F  +   G   +
Sbjct: 783 LGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPN 842

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           + V+  +I+ F +       +E+FE+M+     P+      +L+   K      A+ L  
Sbjct: 843 VGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLE 902

Query: 460 EMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERL 496
           EM++ GCV  D V + +L    G     +  ES F+R+
Sbjct: 903 EMEKVGCV-PDLVTYNILIDGVGKMGMVDEAESYFKRM 939



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 137/591 (23%), Positives = 264/591 (44%), Gaps = 70/591 (11%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP+V  Y  ++  + +A + E A  +F EM++   +PD   Y+TLI   GK G  D A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M+   +  +L  Y+ +I +  K     +A  +F  LK  G VPD+  YNT+I+V
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471

Query: 134 FGKAKLFKEARLLIEEMREQG----VKPDT---------------------------VSY 162
            GK     +   +I+EM E+G    +  D+                           ++Y
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           +TL++ ++ N    EA+ +   M +  C   + T   ++D  G+     +A  L   M K
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G +PSVV+Y++L+  + + +   E++ LF  M RK    +V TY+ +I    KS + ++
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A ++   M+  G+EP    Y T+++   K  K+D A  +F +L+ S +  D  +Y  M+ 
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVK 398
              +   V  A +L+  ++  N +P      + +  L ++GR+EEA  +F +  + G   
Sbjct: 712 GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMR------------------------------- 427
           D+  +  ++++  +  K ++ + +F  M                                
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831

Query: 428 ----SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
               S G  P+  + + +++S+GK    + A +L+ EMQ   C  +   +  +LS     
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
              N+ E L E ++    +     ++++     +   +++A     RM ++
Sbjct: 892 GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 175/330 (53%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E+   P  F YN+++  ++++ + + A  L D M+ + I PD +TY++L+   GK G  
Sbjct: 695  QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A +   +M ++    D+V Y++L+++  K    S A+ IF  +     VPD+V Y+++
Sbjct: 755  EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I+  GK    +EA    E    +G  P+   YS+L++ + +      AL +F EM    C
Sbjct: 815  IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            P ++ T N ++    +      A++L   M K+G  P +V+YN L+   G+  +  EA  
Sbjct: 875  PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             F+ M+ K I  +V+T+ ++I+  GK  +  +A  L   M+  G  P+ +TY+ +I I G
Sbjct: 935  YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +AGK+  AAM+F +++  G   D +    M
Sbjct: 995  RAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/562 (21%), Positives = 253/562 (45%), Gaps = 35/562 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  ++  YS +V  Y ++++ +  A++ +    +   M + G     +  ++L+  FG  
Sbjct: 171 WAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGST 230

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                A+    QM+    +    +Y+ ++EL  K   Y  A+ +F +L    I PD   +
Sbjct: 231 NNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTF 290

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
              ++ F ++     A   I+EM + G+ P   +++ L++  V++    EA   F  M  
Sbjct: 291 RIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           + C  ++ T   +++   +    ++A  +F  M++    P  ++YNTL+   G+A     
Sbjct: 351 LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADM 410

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF+ M+ + +  N+ TYN MI + GK+    +A  L  +++ +G  P+  TY+T+I 
Sbjct: 411 ACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVE-------------------------------IDPVL 336
           + GK G++D+   + +++   G E                               +  + 
Sbjct: 471 VLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEIT 530

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAF 392
           Y T++ A+   G V  A +LL  +++   IP      T +  L +AGR++EA  + R+  
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G    +  +  ++  F +  +    + +F++M   G   D    +LV+N   K  + +
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
            A D++  M+EEG       +  +LS     +  +    +F  L   S +    +++++ 
Sbjct: 651 QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710

Query: 513 GIYERANRLNDASRIMNRMNKR 534
               ++NR+++A ++++ M  +
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQ 732



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 182/376 (48%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E    P +  Y  +L ++++ ++ + A  +F+E+++  + PD + Y+ ++    K    
Sbjct: 660  KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            D A   +  M+   +  DL  Y++L++   K     +A ++F+++   G  PD+VAY ++
Sbjct: 720  DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            ++V GK      A ++   M ++   PD V+YS+L++   +  +  EA   F       C
Sbjct: 780  MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              ++   + +ID +G+  M   A  LF  M++    P++V+YN LL    +A     A  
Sbjct: 840  TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            L   M++     ++VTYN +I   GK    ++A +  + M+ +GI P+ IT++++I   G
Sbjct: 900  LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            K  KL  A  LF  +   G     V Y  +I    R G V  A  + HE++    +P   
Sbjct: 960  KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGI 1019

Query: 371  AITILARAGRIEEATW 386
             I I+ R   + E  +
Sbjct: 1020 TIGIMKRILSVREQQF 1035


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 240/528 (45%), Gaps = 43/528 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SP+V AYN V+    +  +   A  LF EM ++G+ PD  TY+ +I    K    
Sbjct: 257 EGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L+QM  +    D V Y+ +I     L    +A  +F ++KS G++P++V  N+ 
Sbjct: 317 DKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSF 376

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    K    KEA  + + M  +G KPD VSY TLL+ Y     F + + +F  M     
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    NI+I  Y +  M  DA  +F  M++ G+ P VV+Y+T++  +       +A+ 
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE-------------- 296
            F  M  + I+ N   Y+++I+ +       KA  L+ EM N+GI               
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556

Query: 297 ----------------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                                 P+ IT++++I  +   GK+D+A  +   +   GVE D 
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T++  Y + G +     L  E++    +PNT+     +  L RAGR   A   F +
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             ++G    +S++G ++    RN      I +F+K+ +        I+  ++N+  K++ 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQM---LSLYGARKDFNMLESLFER 495
            E A +L++ +   G + ++  +  M   L   GA +D N + S  E+
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEK 784



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 232/492 (47%), Gaps = 9/492 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM--EQDRVSGDLVLYSNLIEL 98
           L   M + G  P+ ++YS ++       M   A+   Q M  E    S ++V Y+ +I  
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K  +  KA S+F  +   G+ PD+V YN +I+   KA+   +A L++ +M   G +PD
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           TV+Y+ +++ Y    +  EA  +F +M       ++  CN  +    +   +K+A  +F 
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
           SM   G  P +VSY TLL  Y     F + I LF  M+   I  +   +N +I  Y K  
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             + A  +  EMQ +G+ P+ +TYST+I+ + + G+L  A   F ++ + G++ +  +Y 
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514

Query: 339 TMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
           ++I  +   G +  AK L+ E+      +P+ +   + I  L + GR+ +A  +F    D
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            GE  D+  F  +I+ +    K     ++ + M   G   D    + +L+ Y K      
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLS-LYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
              L+ EMQ +G   +   +  ML+ L+ A +     +   E ++S + +    ++ ++ 
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT-VSIYGIIL 693

Query: 513 GIYERANRLNDA 524
           G   R N  ++A
Sbjct: 694 GGLCRNNCADEA 705



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 1/346 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y+ V+    R  +   A   F++M  RGI P+   Y ++I  F   G    A  
Sbjct: 472 SPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKE 531

Query: 76  WLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + +M    +   D+V ++++I    K      A  IF  +   G  PD++ + ++I+ +
Sbjct: 532 LVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGY 591

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  +A  +++ M   GV+ D V+YSTLL+ Y +N +  + L++F EM       + 
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  IM+    +      A + F  M + G   +V  Y  +L          EAI LF+ 
Sbjct: 652 VTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +    ++ ++   NTMI    K    E+A  L   +   G+ PN  TY  +I    K G 
Sbjct: 712 LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGA 771

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           ++ A  +F  +  SG+     L   +I      G +A A   L ++
Sbjct: 772 VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817


>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
 gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
          Length = 677

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 222/461 (48%), Gaps = 6/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P    YN ++    RA QW  A  + ++M +  I P R TY+ +I   G  G +
Sbjct: 38  QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DLV ++ ++   +  + YSKAIS F  +K + +  D    N +
Sbjct: 98  KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK--PDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I+   K     EA  L   MRE+  K  PD V+Y+++++ Y    +     ++F  M   
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++   N ++  Y    M ++A  +F  ++K G+ P +VSY +LL  YG +    +A
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M++   + N V+YN +I  YG +   ++A  L+ EM+  GI+P+ ++ ST++A 
Sbjct: 278 REVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA 337

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+  ++ R   + +  RS G++++ V Y + I +Y   G    A  L   +R+ N  P 
Sbjct: 338 CGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397

Query: 369 ETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                IL    ++ G+  E+   F    D+       V+  +I  + +  K +     F 
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFS 457

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            M+ +G FPD      ++ +Y     ++ A DL+ EM+  G
Sbjct: 458 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 231/498 (46%), Gaps = 34/498 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N+VL  +    Q+  A   F+ M+   +  D +T + +I C  K G    AI  
Sbjct: 114 PDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173

Query: 77  LQQMEQDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              M + R     D+V Y++++             +IF  + + G+ P++VAYN+++  +
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
               + +EA  +   +++ G++PD VSY++LLN Y  + +  +A  VF +M + +C  + 
Sbjct: 234 ASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK 293

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +ID YG   M K+A  L   M K GI P VVS +TLL   G          +   
Sbjct: 294 VSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEA 353

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            + + I+ N V YN+ IK Y    ++EKA  L   M+   ++P+A+TY+ +I+   K GK
Sbjct: 354 ARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGK 413

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              +   F+ +  S V     +Y ++I +Y                              
Sbjct: 414 YTESLRFFEDMVDSKVSSTKEVYSSLIYSY------------------------------ 443

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             + G++ EA   F     +G   D+  +  +I+ ++    +    ++F++M   G  PD
Sbjct: 444 -IKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPD 502

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
           + I + ++ ++ K  E E    L   M+++    + + +F++++     +D+     + E
Sbjct: 503 AIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 562

Query: 495 RLDSD-SNINKKELHHVV 511
            LDS  S+I+   L+HV+
Sbjct: 563 YLDSSLSSISVGTLNHVL 580



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/482 (23%), Positives = 227/482 (47%), Gaps = 6/482 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y +++R   R  Q + A GLF EM++    PD   Y++LI    + G +  AI+ ++ M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +      Y+N+I       ++ KA+ +  ++  +G+ PDLV +N +++       + 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCNI 199
           +A    E M+   V  DT + + +++  V+  +  EA+ +F  M E    CP D+ T   
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  Y      ++   +F  M   G+ P++V+YN+LL  Y    +  EA+ +F L+++  
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  ++V+Y +++  YG+S + EKA  +  +M+    +PN ++Y+ +I  +G AG L  A 
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITIL 375
            L  ++   G++ D V   T++ A  R   +   + +L   R      NT+   + I   
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              G  E+A  ++    ++    D   +  +I   S+  KY   +  FE M  +      
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTK 433

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
            + + ++ SY K  +   A+  +S M++ GC      +  ++  Y A   +     LF+ 
Sbjct: 434 EVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKE 493

Query: 496 LD 497
           ++
Sbjct: 494 ME 495



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 214/489 (43%), Gaps = 45/489 (9%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y  +I  + +    D A     +M++ R   D  +Y++LI    +   +  AI+I   + 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            + I P    YN +IN  G A  +K+A  L ++M E GV PD V+++ +L+      ++ 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +A+S F  M   N   D  T NI+I                               + L+
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIII-------------------------------HCLV 162

Query: 237 RVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++ G+    GEAI LF  M  +R +   +VVTY +++  Y    + E    +   M   G
Sbjct: 163 KI-GQC---GEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG 218

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           ++PN + Y++++  +   G    A  +F  ++ +G+  D V Y +++ AY R      A+
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            + ++++    +PN +     I     AG ++EA  +  +    G   D+     ++   
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R ++   +  + E  RS G   ++      + SY    ++E A +LY+ M+E   V  D
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN-VKPD 397

Query: 471 QVHFQMLSLYGARKDFNMLESL--FERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
            V + +L + G+ K     ESL  FE +      + KE++  +   Y +  +L++A    
Sbjct: 398 AVTYNIL-ISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTF 456

Query: 529 NRMNKRRTF 537
           + M K   F
Sbjct: 457 SSMKKSGCF 465



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/393 (21%), Positives = 150/393 (38%), Gaps = 76/393 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +Y  +L    R+ Q E A  +F++M++    P++ +Y+ LI  +G  GM   A+  
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315

Query: 77  LQQMEQDRVSGDLVLYSNLI----------------ELARK------------------- 101
           L +ME+D +  D+V  S L+                E AR                    
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLS 375

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK-------------------- 141
             DY KA+ +++ ++ S + PD V YN +I+  G +KL K                    
Sbjct: 376 FGDYEKALELYTSMRESNVKPDAVTYNILIS--GSSKLGKYTESLRFFEDMVDSKVSSTK 433

Query: 142 -----------------EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
                            EA      M++ G  PD ++Y+TL+  Y     +  A  +F E
Sbjct: 434 EVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKE 493

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M     P D   C+ +++ + +    +   +L   M+K  I  +  SY  ++        
Sbjct: 494 MEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRD 553

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           +  A  +   +       +V T N ++   GK  + E    L  +M          TY+ 
Sbjct: 554 WKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAV 613

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           ++      GK  +   + Q +  SGV   P LY
Sbjct: 614 VLRNLLVVGKWRKYIEVLQWMEDSGVH--PTLY 644


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 258/536 (48%), Gaps = 7/536 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V ++D + + A  +P  + YN ++    R   +E A G+  EM+  G +PD+ TY+ L+ 
Sbjct: 256 VGLVDRM-KSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLD 314

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            +GK      A+  LQ+ME +     +V Y++LI    +      A+ + +++   GI P
Sbjct: 315 VYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKP 374

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+  Y T+++ F KA   K A  + EEMR +G KP+  +++ L+ ++    KF E + VF
Sbjct: 375 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVF 434

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            ++    C  D+ T N ++ V+GQ  M  +   +F  M++ G  P   ++NTL+  Y   
Sbjct: 435 EDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC 494

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
             F +A+ +++ M    +  ++ +YN ++    +    +++  ++ EM++   +PN +TY
Sbjct: 495 GSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTY 554

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            +++  +    +++R   L +++ S  +E   VL +T+++   +  L+   +R   ELRQ
Sbjct: 555 CSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQ 614

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               P+       ++I  R   + +A  +       G    ++ +  ++ ++SR+  +  
Sbjct: 615 RGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFER 674

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             E+  ++ + G  PD      V+ +Y +      A  + SEM+E G       +   ++
Sbjct: 675 SEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 734

Query: 479 LYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            Y A   F   ++ +   +      N+   + +V   Y + NR ++AS  +N + K
Sbjct: 735 SYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIV-DWYCKLNRRDEASMFVNNLRK 789



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 254/536 (47%), Gaps = 44/536 (8%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  L   + + G   D Y Y+++IT F   G +  A+   ++ME+      L+ Y+ ++ 
Sbjct: 184 AASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILN 243

Query: 98  LARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +  K+   ++K + +  R+KS+GI PD   YNT+I+   +  L++EA  +++EM+  G  
Sbjct: 244 VYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFS 303

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD V+Y+ LL++Y ++ +  EA+ V  EM    CP  + T N +I  Y +  + +DA  L
Sbjct: 304 PDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALEL 363

Query: 217 -----------------------------------FWSMRKMGIDPSVVSYNTLLRVYGE 241
                                              F  MR  G  P++ ++N L++++G 
Sbjct: 364 KNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGN 423

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              F E + +F  ++  +   ++VT+NT++ ++G++    + + + +EM+  G  P   T
Sbjct: 424 RGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 483

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T+I+ + + G  D+A  +++++  +GV  D   Y  ++ A  R GL   ++++L E++
Sbjct: 484 FNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK 543

Query: 362 QPNTIPRETAITILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
                P E     L  A   G+  E      +   +G ++  +V   +  L   N K   
Sbjct: 544 DGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVL--LKTLVLVNSKCDL 601

Query: 419 VIEV---FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           ++E    F ++R  G+ PD   +  +++ YG+ +    A+++   M+  G   S   +  
Sbjct: 602 LMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNS 661

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++ +Y    +F   E +   + +         ++ V   Y R  R+ DASR+++ M
Sbjct: 662 LMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEM 717



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 239/495 (48%), Gaps = 16/495 (3%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I+  GK G   +A S L  + +D    D+  Y+++I        Y +A+ +F +++ 
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228

Query: 118 SGIVPDLVAYNTMINVFGKAKL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            G  P L+ YN ++NV+GK  + + +   L++ M+  G+ PD+ +Y+TL++     + + 
Sbjct: 229 VGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYE 288

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EA  V  EM       D  T N ++DVYG+   +K+A  +   M   G  PS+V+YN+L+
Sbjct: 289 EAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLI 348

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             Y    L  +A+ L   M  K I+ +V TY T++  + K+ + + A  + +EM+N G +
Sbjct: 349 SAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK 408

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN  T++ +I + G  GK      +F+ +++     D V + T++  + + G+ +    +
Sbjct: 409 PNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGV 468

Query: 357 LHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+++   +P      T I+  +R G  ++A  V+++  +AG   D+S +  ++   +R
Sbjct: 469 FKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALAR 528

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE----TADDLYSEMQEEGCVF 468
              +    +V  +M+     P+      +L++Y   +E E     A+++YS     G + 
Sbjct: 529 GGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYS-----GIIE 583

Query: 469 SDQVHFQMLSLYGARKDFNM-LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
              V  + L L  ++ D  M  E  F  L            + +  IY R   +  A+ I
Sbjct: 584 PRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEI 643

Query: 528 MNRMNKRRTFNSSLV 542
           ++ M KR  F  SL 
Sbjct: 644 LDCM-KRGGFTPSLT 657



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 209/428 (48%), Gaps = 5/428 (1%)

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           W++  ++  +  +  + + +I +  K    S A S+   L   G   D+ AY +MI  F 
Sbjct: 152 WVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFT 211

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFVEALSVFAEMNEVNCPLDL 194
               ++EA ++ ++M E G KP  ++Y+ +LN+Y +    + + + +   M       D 
Sbjct: 212 SNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDS 271

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I    + ++ ++A  +   M+  G  P  V+YN LL VYG++    EA+ + + 
Sbjct: 272 YTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQE 331

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+      ++VTYN++I  Y +    E A  L  +M  +GI+P+  TY+T+++ + KAGK
Sbjct: 332 MEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGK 391

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
              A  +F+++R+ G + +   +  +I  +   G      ++  +++     P+ +   T
Sbjct: 392 DKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNT 451

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +++  + G   E + VF++   AG V +   F  +I  +SR   +   + V+++M  AG
Sbjct: 452 LLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAG 511

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD      VL +  +   ++ ++ + +EM++  C  ++  +  +L  Y   K+   + 
Sbjct: 512 VNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMC 571

Query: 491 SLFERLDS 498
           +L E + S
Sbjct: 572 ALAEEIYS 579



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 105/188 (55%), Gaps = 2/188 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F E+RQRG +PD  T + +++ +G+  M   A   L  M++   +  L  Y++L+ +  +
Sbjct: 609 FLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSR 668

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
            +++ ++  I   + + GI PD+++YNT+I  + +    ++A  ++ EMRE G  PD ++
Sbjct: 669 SANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIIT 728

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T +  Y  +  FVEA+ V   M +  C  + +T N ++D Y +L+   +A     ++R
Sbjct: 729 YNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788

Query: 222 KMGIDPSV 229
           K+  DP +
Sbjct: 789 KL--DPHI 794


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 241/512 (47%), Gaps = 12/512 (2%)

Query: 23  NVVLRNVLRAKQWELA-HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           N +L+ +  A + E A + L   M + G  P+  +YS ++       M   A+  LQ M 
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 82  QD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +     S D+V YS +I       +  KA S+F  +   G+ PD+V YN +I+   KA+ 
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A L++ +M   G +PDTV+YS +++ Y    +  EA  +F EM +     ++ TCN 
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
            +    +   +K+A   F SM   G  P + SY TLL  Y     F + I LF  M+   
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  N   +  +I  Y K    + A  +  EMQ +G+ P+ +TYST+I+ + + G+L  A 
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAM 495

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRETAITI 374
             F ++ + G++ +  +Y ++I  +   G +  AK L+ E+      +P+ +   + I  
Sbjct: 496 EKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINS 555

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+ +A  +F  A D GE   +  F  +I+ +    K     ++ + M   G  PD
Sbjct: 556 LCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPD 615

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESL 492
                 +L+ Y K         L+ EMQ +G V  + V + ++   L+ A +     +  
Sbjct: 616 IVTYNTLLDGYFKNGRINDGLTLFREMQRKG-VKPNTVTYGIMLAGLFRAGRTVAARKKF 674

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDA 524
            E ++S + +    ++ ++ G   R N  ++A
Sbjct: 675 HEMIESGTTVT-VSIYGIILGGLCRNNCADEA 705



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 222/502 (44%), Gaps = 40/502 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V AY+ V+       +   A  LF EM ++G+ PD  TY+ +I    K    D A  
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+QM  D    D V YS +I     L    +A  +F  +K  G++P++V  N+ +    
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEA    + M  +G KPD  SY TLL+ Y     F + + +F  M       +  
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              I+I  Y +  M  DA  +F  M++ G+ P VV+Y+T++  +       +A+  F  M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE------------------- 296
             + I+ N   Y+++I+ +       KA  L+ EM N+GI                    
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 297 -----------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                            P  IT++++I  +   GK+D+A  +   +   GVE D V Y T
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  Y + G +     L  E++    +PNT+     +  L RAGR   A   F +  ++G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               +S++G ++    RN      I +F+K+ +        I+  ++N+  K++  E A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 456 DLYSEMQEEGCVFSDQVHFQML 477
           +L++ +   G + ++  +  M+
Sbjct: 742 ELFATISASGLLPNESTYGVMI 763



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 164/378 (43%), Gaps = 15/378 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y+ V+    R  +   A   F++M  RGI P+   YS++I  F   G    A  
Sbjct: 472 SPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKE 531

Query: 76  WLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + +M    +   D+V +S++I    K      A  IF      G  P ++ +N++I+ +
Sbjct: 532 LVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGY 591

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  +A  +++ M   GV+PD V+Y+TLL+ Y +N +  + L++F EM       + 
Sbjct: 592 CLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  IM+    +      A + F  M + G   +V  Y  +L          EAI LF+ 
Sbjct: 652 VTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +    ++ ++   NTMI    K    E+A  L   +   G+ PN  TY  +I    K G 
Sbjct: 712 LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGG 771

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA---------KRLLHELRQPNT 365
           ++ A  +F  +  SG+     L   +I      G +A A         KR+L E    + 
Sbjct: 772 VEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSL 831

Query: 366 IPRETAITILARAGRIEE 383
           +     +++ +R G+ +E
Sbjct: 832 M-----LSLFSRKGKYQE 844


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 251/523 (47%), Gaps = 20/523 (3%)

Query: 33  KQWELAHGLFDEMRQRGIAPDRYTYST---LITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           K+ ++A  +F  +R+R         S    +IT  GKEG   +A S L  + +D    D+
Sbjct: 158 KKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDV 217

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-FKEARLLIE 148
             Y++LI        Y  A+ +F +++  G  P L+ YN ++NV+GK  + + +   L+ 
Sbjct: 218 YAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVH 277

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            M+  GV PD  +Y+TL++       + EA  VF EM       D  T N ++DVYG+  
Sbjct: 278 GMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSR 337

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             K+A  +   M   G  PS+V+YN+L+  Y    L  EA+ L   M  K I+ +V TY 
Sbjct: 338 RPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYT 397

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++  + K+   E A  +  EM+  G +PN  T++ +I + G  G+      +F+++   
Sbjct: 398 TLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEIC 457

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEA 384
               D V + T++  + + G+ +    +  E+++   +P      T I+  +R G  ++A
Sbjct: 458 NCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQA 517

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             V+++  +AG   D+S +  ++   +R   +    +VF +M+     P+      +L++
Sbjct: 518 MAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA 577

Query: 445 YGKLREFE----TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM-LESLFERLDSD 499
           Y   +E E     A+++YS + E   V       + L L  ++ D  M  E  FE L   
Sbjct: 578 YANSKEIERMHTLAEEIYSGLTEPVPVL-----LKTLVLVNSKCDLLMETEHAFEELKKK 632

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            + +   L+ ++A IY R   +  A+ I+N MN+   F+ SL 
Sbjct: 633 GSPDLSTLNAMIA-IYGRRQMVAKANEILNFMNE-SGFSPSLA 673



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 262/521 (50%), Gaps = 12/521 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL- 77
           V+AY  ++       ++  A  +F +M + G  P   TY+ ++  +GK GM  S IS L 
Sbjct: 217 VYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLV 276

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             M+   V+ D   Y+ LI   R+ S Y +A  +F  +K SG  PD V +NT+++V+GK+
Sbjct: 277 HGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS 336

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +  KEA  +++EM   G  P  V+Y++L++ Y  +    EA+ +  +M E     D+ T 
Sbjct: 337 RRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTY 396

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++  + +  M + A R+F  MR  G  P++ ++N L++++G    F E + +F  ++ 
Sbjct: 397 TTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEI 456

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                ++VT+NT++ ++G++    + + + +EM+  G  P   T++T+I+ + + G   +
Sbjct: 457 CNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQ 516

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  +++++  +GV  D   Y  ++ A  R GL   ++++  E++    +PN +   + + 
Sbjct: 517 AMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLH 576

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV---FEKMRSAG 430
             A +  IE    +  + + +G  + + V   +  L   N K   ++E    FE+++  G
Sbjct: 577 AYANSKEIERMHTLAEEIY-SGLTEPVPVL--LKTLVLVNSKCDLLMETEHAFEELKKKG 633

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD   +  ++  YG+ +    A+++ + M E G   S   +  ++ ++   ++F   E
Sbjct: 634 S-PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSE 692

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            + + + +         ++ V   Y R  R+ DASRI + M
Sbjct: 693 EVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYM 733



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 248/524 (47%), Gaps = 48/524 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W    GL   M+  G+APD YTY+TLI+C  +  
Sbjct: 244 EEEGCKPTLITYNVIL-NVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGS 302

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +++ A    ++M+    S D V ++ L+++  K     +A+ +   ++ SG  P +V YN
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYN 362

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL---------------------- 166
           ++I+ + +  L +EA  L ++M E+G+KPD  +Y+TLL                      
Sbjct: 363 SLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAA 422

Query: 167 ---------NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
                    N  ++ H    +F E + VF E+   NC  D+ T N ++ V+GQ  M  + 
Sbjct: 423 GCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEV 482

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  M++ G  P   ++NTL+  Y     F +A+ +++ M    +  ++ +YN ++  
Sbjct: 483 SGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +    E++  +  EM++   +PN +TY +++  +  + +++R   L +++ S   E  
Sbjct: 543 LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPV 602

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQ 390
           PVL +T+++   +  L+   +    EL++   P+       I I  R   + +A  +   
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNF 662

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             ++G    ++ +  ++ + SR++ +    EV +++ + G  PD      V+ +Y +   
Sbjct: 663 MNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGR 722

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
            + A  ++S M+  G V     +   ++ Y A       +SLFE
Sbjct: 723 MKDASRIFSYMKTYGLVPDVITYNTFVASYAA-------DSLFE 759



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+E++++G +PD  T + +I  +G+  M   A   L  M +   S  L  Y++L+ +  +
Sbjct: 626 FEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSR 684

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             ++ ++  +   + + G+ PDL++YNT+I  + +    K+A  +   M+  G+ PD ++
Sbjct: 685 SENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVIT 744

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T +  Y  +  F +A+ V   M +  C  +  T N ++D Y +     DA     S+ 
Sbjct: 745 YNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLN 804

Query: 222 KMGIDPSVV 230
           ++  DP V 
Sbjct: 805 QL--DPHVT 811



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 94/185 (50%), Gaps = 36/185 (19%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           IL+++NE   +SPS+  YN ++    R++ +E +  +  E+  +G+ PD  +Y+T+I  +
Sbjct: 659 ILNFMNESG-FSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAY 717

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            + G                                ++ D S+   IFS +K+ G+VPD+
Sbjct: 718 CRNG--------------------------------RMKDASR---IFSYMKTYGLVPDV 742

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT +  +    LF++A  ++  M + G K +  +Y+++++ Y ++ +  +A+   + 
Sbjct: 743 ITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSS 802

Query: 185 MNEVN 189
           +N+++
Sbjct: 803 LNQLD 807


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 248/517 (47%), Gaps = 8/517 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    E    +FDEM   G+AP  ++++ L
Sbjct: 128 RSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTAL 187

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-ELARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G + S++  L +M+++RVS  ++ Y+ +I   AR   D+ + + +F++++  G
Sbjct: 188 INAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEG 247

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I  D+V YNT+++   +  L  EA ++   M E G+ PD  +YS L+  + + ++  +  
Sbjct: 248 IQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVS 307

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       D+T+ N++++ + Q    K+A  +F  M+  G  P+  +Y+ LL +Y
Sbjct: 308 ELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLY 367

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G    + +   LF  M+    E N  TYN +I ++G+    ++   L  +M    +EPN 
Sbjct: 368 GRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM 427

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY  +I   GK G  + A  +   +   GV      Y  +I AY +  L   A    + 
Sbjct: 428 ETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNT 487

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +  + P      + I + A+ G  +E+  +  +   +G  ++   F  +IE F +  +
Sbjct: 488 MNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 547

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   I+ + +M  A   PD   +  VL+ Y      E +++ + E++  G + S   +  
Sbjct: 548 FEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCM 607

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           ML++Y     ++    L + + ++   N   +H V+ 
Sbjct: 608 MLAVYAKADRWDDAHQLLDEMFTNRVSN---IHQVIG 641



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 243/542 (44%), Gaps = 42/542 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +LD + +E R SPS+  YN V+ +  R    WE   GLF +MR  GI  D  TY+TL
Sbjct: 200 SLELLDRMKKE-RVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTL 258

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ++   + G+ D A    + M +  +  D+  YS L+E   KL+   K   +   ++S G 
Sbjct: 259 LSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGS 318

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+ +YN ++    ++   KEA  +  +M+  G  P+  +YS LLNLY  + ++ +   
Sbjct: 319 FPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRD 378

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   +  T NI+I+V+G+    K+   LF  M +  ++P++ +Y  L+   G
Sbjct: 379 LFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACG 438

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L  +A  +   M  K +  +   Y  +I+ YG++  +E+A      M   G +P   
Sbjct: 439 KGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVE 498

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+++I ++ K G    +  +  K+  SGV  +   +  +I A+ + G    A +   E+
Sbjct: 499 TYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEM 558

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +    P+    E  +++   AG +EE+                                
Sbjct: 559 EKARCDPDEQTLEAVLSVYCFAGLVEESE------------------------------- 587

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
               E F ++++ G  P      ++L  Y K   ++ A  L  EM         QV  QM
Sbjct: 588 ----EQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQM 643

Query: 477 L-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           +   Y    ++ M+E +FE+L S+        ++ +        +   A+R++N   KR 
Sbjct: 644 IRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRG 703

Query: 536 TF 537
            F
Sbjct: 704 LF 705



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/517 (18%), Positives = 213/517 (41%), Gaps = 68/517 (13%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + +V +   +   W+ +  LF  M RQ    P+ + Y+ +I   G+EG+ +         
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLE--------- 163

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
                                     K   IF  + S G+ P + ++  +IN +G+   +
Sbjct: 164 --------------------------KCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQY 197

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNI 199
           K +  L++ M+++ V P  ++Y+T++N        + E L +FA+M       D+ T N 
Sbjct: 198 KSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNT 257

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +  +  +A+ +F +M + GI P + +Y+ L+  +G+     +   L + M+   
Sbjct: 258 LLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGG 317

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              ++ +YN +++ + +S   ++A  + ++MQ  G  PNA TYS ++ ++G+ G+ D   
Sbjct: 318 SFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVR 377

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            LF +++ S  E +   Y  +I  +   G       L H++ + N  P            
Sbjct: 378 DLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM---------- 427

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                           E  +  +F C      +   + +  ++   M   G  P S    
Sbjct: 428 ----------------ETYEGLIFAC-----GKGGLHEDAKKILLHMNEKGVVPSSKAYT 466

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
            V+ +YG+   +E A   ++ M E G   + + +  ++ ++     +   E++  ++   
Sbjct: 467 GVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQS 526

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
                ++  + V   + +  +  +A +    M K R 
Sbjct: 527 GVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARC 563



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 144/317 (45%), Gaps = 36/317 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN+++        ++    LF +M +  + P+  TY  LI   GK G+ + A   
Sbjct: 390 PNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKI 449

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  V      Y+ +IE   + + Y +A+  F+ +   G  P +  YN++I +F K
Sbjct: 450 LLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAK 509

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L+KE+  ++ +M + GV  +  +++ ++  + +  +F EA+  + EM +  C  D  T
Sbjct: 510 GGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQT 569

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA-------- 248
              ++ VY    + ++++  F  ++ +GI PSV+ Y  +L VY +A+ + +A        
Sbjct: 570 LEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMF 629

Query: 249 ------IH----------------------LFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                 IH                      +F  ++ +     V  YNT+++      + 
Sbjct: 630 TNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQK 689

Query: 281 EKATNLMQEMQNRGIEP 297
           E+AT ++ E   RG+ P
Sbjct: 690 ERATRVLNEATKRGLFP 706


>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
 gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 249/525 (47%), Gaps = 33/525 (6%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P     N ++    R+ QW  A  + ++M Q+ I P R TY+ LI   G  G +
Sbjct: 162 QKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNW 221

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DLV ++ ++   +  + Y+KA+S F  +K + I PD    N +
Sbjct: 222 REALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNII 281

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK--PDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I    K   +++A  + + MRE+  +  PD V+++++++LY  N +     +VF+ M   
Sbjct: 282 IYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAE 341

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ + N ++  Y    M K+A  +F +++  G+ P VVSY +LL  YG ++   +A
Sbjct: 342 GLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKA 401

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F +M+R +++ N+V+YN MI  YG +    +A  +++EM+  GI PNA++  T++A 
Sbjct: 402 REVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAA 461

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+  +     ++ Q      ++++ + Y + I +Y  VG    A  +   +R+   IP 
Sbjct: 462 CGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPD 521

Query: 369 ETAITILA-------------------------------RAGRIEEATWVFRQAFDAGEV 397
               T+L                                 +G+I EA  +F +   AG  
Sbjct: 522 AVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCS 581

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  M+  ++  + +     + ++M      PD+   + ++ ++ K  +      L
Sbjct: 582 PDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLIL 641

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
              M+E+    SD + F+M+S     +D+     L + ++S  ++
Sbjct: 642 AEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLMESSFSV 686



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/497 (21%), Positives = 211/497 (42%), Gaps = 88/497 (17%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR--GIAPDRYTYSTLITCFGKEGMFDSAI 74
           P     N+++  + +  Q+E A G+F  MR++     PD  T++++I  +   G  ++  
Sbjct: 273 PDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCR 332

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +    M  + +  ++V Y+ L+          +A+S+F+ +K+SG+ PD+V+Y +++N +
Sbjct: 333 AVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSY 392

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-------NE 187
           G+++  K+AR + E M+   +KP+ VSY+ +++ Y  N    EA+ V  EM       N 
Sbjct: 393 GRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNA 452

Query: 188 VNCPLDLTTC----------------------------NIMIDVYGQLDMAKDADRLFWS 219
           V+    L  C                            N  I  Y  +   + A  ++ S
Sbjct: 453 VSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRS 512

Query: 220 MRKMGIDPSVVSYNTL------LRVYGEAELF---------------------GEAIHLF 252
           MRK  + P  V++  L      +  Y EA  F                      EA  +F
Sbjct: 513 MRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMF 572

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+      +VVTY  M+  Y  +   +KA  L+QEM+   I+P+ I  S ++  + K 
Sbjct: 573 NKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKG 632

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--ET 370
           G   +  +L + +R   + +   ++  M+ A            LL + R    + +  E+
Sbjct: 633 GDPSKVLILAEFMREKEIPLSDAIFFEMVSACS----------LLRDWRTTIELIKLMES 682

Query: 371 AITILA------------RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           + ++++            ++G+IE    +F +   +G   + + +  +++       +  
Sbjct: 683 SFSVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRK 742

Query: 419 VIEVFEKMRSAGYFPDS 435
            IEV E M  A   P +
Sbjct: 743 YIEVLEWMEEARVQPSN 759



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 8/275 (2%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN ++R++       +A  LF  MQ+   + +  T N +I  +G+S +   A N+M++M 
Sbjct: 138 YNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDML 197

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            + I P+  TY+ +I   G +G    A  L +K+  +GV  D V +  ++ AY+     A
Sbjct: 198 QKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYA 257

Query: 352 HAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFD--AGEVKDISVFGC 405
            A      ++  N  P  T + I    L + G+ E+A  +F+   +  A    D+  F  
Sbjct: 258 KALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTS 317

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I L+S N +  N   VF  M + G  P+      ++ +Y      + A  +++ ++  G
Sbjct: 318 IIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSG 377

Query: 466 CVFSDQVHF-QMLSLYGARKDFNMLESLFERLDSD 499
            +  D V +  +L+ YG  +       +FE +  D
Sbjct: 378 -LRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRD 411



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 142/306 (46%), Gaps = 28/306 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +  AYN  + + +   ++E A  ++  MR+  + PD  T++ LI+   K   +  A+ +L
Sbjct: 486 NTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFL 545

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M   ++      YS+           ++A S+F+++K +G  PD+V Y  M++ +  A
Sbjct: 546 SEMMDLKIPMTKEAYSS--------GKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAA 597

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD---- 193
           + +K+A  L++EM E  ++PDT++ S L+  + +     + L +   M E   PL     
Sbjct: 598 EHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIF 657

Query: 194 ---LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN---TLLRVYGEAELFGE 247
              ++ C+++ D    +++ K  +  F          SVVS      LL + G++     
Sbjct: 658 FEMVSACSLLRDWRTTIELIKLMESSF----------SVVSIGLLNQLLHLLGKSGKIES 707

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            + LF  +     E N  TY+ ++K         K   +++ M+   ++P+   Y  II+
Sbjct: 708 MMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRKYIEVLEWMEEARVQPSNGMYFDIIS 767

Query: 308 IWGKAG 313
              K+G
Sbjct: 768 FAQKSG 773



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 3/175 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP V  Y ++L     A+ W+ A  L  EM +  I PD    S L+  F K G    
Sbjct: 578 AGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSK 637

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +   + M +  +     ++  ++     L D+   I +   ++SS  V  +   N +++
Sbjct: 638 VLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLMESSFSVVSIGLLNQLLH 697

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN--LYVEN-HKFVEALSVFAE 184
           + GK+   +    L  ++   G + +  +YS LL   L V N  K++E L    E
Sbjct: 698 LLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRKYIEVLEWMEE 752


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 212/423 (50%), Gaps = 4/423 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y+ V+    +  QWE A  L  EM  +G+  +  TYS +I    K G ++ A++
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M+++ V+ D++ YS+ I    K   + +A+ +   +   G+ P+ ++Y  +I+   
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   ++EA  L++EM+  GV PD ++YS  ++   +  ++ +AL +  EM       ++ 
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N  ID   +   +K A  L   M   G+ P V++Y+ ++        + EA+ LFR M
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           QR+ I  +VV+ NT I    +    E+A +++ EM   G+ P+AI+Y T I    K  + 
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
                L +++ + G+  D + Y+  + A    GL   A  LL ++      P+ +   +A
Sbjct: 588 KEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSA 647

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I   A+ GR +EAT + RQ    G   D++ F   I+      ++   +EV  +MR+ G 
Sbjct: 648 INACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGV 707

Query: 432 FPD 434
            P+
Sbjct: 708 SPN 710



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 14/458 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y+  +    +  +W+ A GL   M+ +G+ P+   YS  I+   K G +++A+  
Sbjct: 219 PDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDL 278

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M    ++ D++ YS +I+   K   +  A  +   + + G+V +++ Y+ +I    K
Sbjct: 279 LKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAK 338

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              ++EA  L+ EM+E GV PD ++YS+ ++   +  ++ EA+ +  EM     P++  T
Sbjct: 339 WGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM-----PMEGVT 393

Query: 197 CN-----IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            N     I+I    +    ++A  L   M+  G+ P V++Y+  +    +A  + +A+ L
Sbjct: 394 PNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWL 453

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M    +  NV++YN+ I    K+   + A  L++EM   G+ P+ ITYS +IA    
Sbjct: 454 LREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAM 513

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             + + A  LF++++  G+  D V   T I A  + G    A  +L E+      P+ I 
Sbjct: 514 GRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAIS 573

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             TAI   A+  R +E   + R+    G   D   +   +   S +  +   + +   M 
Sbjct: 574 YRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDML 633

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + G  PD       +N+  K   ++ A  L  +M   G
Sbjct: 634 AVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFG 671



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 212/448 (47%), Gaps = 8/448 (1%)

Query: 26  LRNVLR-AKQ---WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           L+  LR AKQ   W  A  + D M+++G+ PD   YS+ I   G    ++ A+  L  M 
Sbjct: 154 LKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMA 213

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                 D++ YS+ I    K+S + +A+ +   +K  G+ P+++ Y+  I+   K   ++
Sbjct: 214 ARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWE 273

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L++EM   G+ PD ++YST+++   +  ++  A  +  EM       ++ T +I+I
Sbjct: 274 TAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVI 333

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               +    ++A  L   M++ G+ P V++Y++ +    +   + EA+ L R M  + + 
Sbjct: 334 GACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVT 393

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N ++Y  +I    K     +A +L+QEMQ  G+ P+ I YS  I    +A + ++A  L
Sbjct: 394 PNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWL 453

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
            +++ ++G+  + + Y + I A  + G    A  LL E+      P+ I     I   A 
Sbjct: 454 LREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAM 513

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
             + EEA  +FR+    G   D+      I   ++   +   ++V  +M + G  PD+  
Sbjct: 514 GRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAIS 573

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
               +++  K   ++   DL  EM   G
Sbjct: 574 YRTAIDACAKGDRWKEIIDLLREMSTVG 601



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 209/439 (47%), Gaps = 5/439 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +LD + E+    P    Y+  +     A+QWE A  L   M  RG  PD  TYS+ 
Sbjct: 169 KALDVLDRMQEQG-VKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSA 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K   +  A+  L+ M+   V  ++++YS  I   RK   +  A+ +   + + G+
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ Y+T+I+   K   ++ A  L+ EM  +GV  + ++YS ++    +  ++ EA++
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM E     D+ T +  I    +    ++A  L   M   G+ P+ +SY  ++    
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +   + EAI L + MQ   +  +V+ Y+  I    ++   E+A  L++EM   G+ PN I
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +Y++ I    K G+   A  L +++ + G+  D + Y  +I +         A  L  E+
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           ++    P+ +   TAI   A+ G  EEA  V  +    G V D   +   I+  ++  ++
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 417 ANVIEVFEKMRSAGYFPDS 435
             +I++  +M + G  PD+
Sbjct: 588 KEIIDLLREMSTVGLTPDA 606



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 198/412 (48%), Gaps = 5/412 (1%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G +  A+  L +M++  V  D   YS+ I        + +A+ + + + + G  PD++ Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           ++ I    K   +KEA  L+  M+ QGVKP+ + YS  ++   +  ++  A+ +  EM  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           V    D+ T + +ID   +    + A RL   M   G+  ++++Y+ ++    +   + E
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ L R MQ   +  +V+TY++ I    K  + E+A  L++EM   G+ PNAI+Y  +I+
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              K G+   A  L Q++++ GV  D + Y   I A  +      A  LL E+      P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N I   +AI   A+ GR + A  + R+    G   D+  +  +I   +  +++   +++F
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
            +M+  G  PD       +N+  +   +E A D+  EM   G V  D + ++
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV-PDAISYR 575



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 4/373 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P V  Y+  +    +  QWE A GL  EM   G+ P+  +Y  +I+   K G +
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             AI  LQ+M+   V  D++ YS  I+   + S + +A+ +   + ++G+ P++++YN+ 
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    K A  L+ EM   G+ PD ++YS ++       ++ EAL +F EM     
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ +CN  I+   Q    ++A  +   M  MG+ P  +SY T +    + + + E I 
Sbjct: 533 TPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIID 592

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L R M    +  + ++Y   +         ++A  L+++M   G+ P+ +TY++ I    
Sbjct: 593 LLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACA 652

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE- 369
           K G+   A +L +++ + G+  D   +   I A         A  +L E+R     P E 
Sbjct: 653 KGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEA 712

Query: 370 ---TAITILARAG 379
              TA+    R G
Sbjct: 713 TYLTAMYACKRCG 725



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 142/300 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y+  +    +A +WE A  L  EM   G+ P+  +Y++ I    K G    A+  
Sbjct: 429 PDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVEL 488

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M    ++ D++ YS +I        + +A+ +F  ++  GI PD+V+ NT IN   +
Sbjct: 489 LREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQ 548

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              ++EA  ++ EM   G+ PD +SY T ++   +  ++ E + +  EM+ V    D  +
Sbjct: 549 GGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAIS 608

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
               +       + K+A  L   M  +G+ P VV+YN+ +    +   + EA  L R M 
Sbjct: 609 YRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMP 668

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +V ++N  I   G   +   A  ++ EM+  G+ PN  TY T +    + G+ D
Sbjct: 669 TFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKD 728


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 231/496 (46%), Gaps = 41/496 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMF 70
           E  Y P+   YN ++  +   ++ + A  LF EM + G   PD +TYST++    K G  
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   ++ M     S ++V YS+L+    K     +A ++  R+  SG  P++V YNT+
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K     EA  L+EEM + G +P+ V+Y+ LL+ + +  K  +A+ +   M E   
Sbjct: 297 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI- 249
             +L T N ++D++ + D  + A +L  SM + G  P+VVSYNT++    +A    E + 
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416

Query: 250 ----------------------------------HLFRLMQRKEIEQNVVTYNTMIKIYG 275
                                              LF L+Q      N+VTYN+++    
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476

Query: 276 KSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           KS   ++A  L++EM + +G  P+ ITY+T+I    K+ ++DRA  LF ++ S G+  D 
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 536

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y  +I +  +   +  A  +L  + +    P  I   T I    + G +++A  + + 
Sbjct: 537 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 596

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G   D+  F   I+  S+  +     E+ E M  AG  PD+     +L  +     
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASR 656

Query: 451 FETADDLYSEMQEEGC 466
            E A DL+  M++ GC
Sbjct: 657 TEDAVDLFEVMRQCGC 672



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 232/471 (49%), Gaps = 6/471 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S A+L +        P    YN ++  + ++ + + A  L +EM   G AP+ ++Y+T++
Sbjct: 27  SDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 86

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F K    ++A+  L+QM       D+V Y+ +I    KL    +A  +  ++   G  
Sbjct: 87  HGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 146

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y T+++ F +      A  L+ +M E+G +P+ ++Y+ +++      K   AL +
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206

Query: 182 FAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           F EM E  +CP D+ T + ++D   +     DA RL  +M   G  P+VV+Y++LL    
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EA  L + M R     N+VTYNT+I  + K    ++A +L++EM + G +PN +
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ ++  + K GK + A  L + +   G   +   Y +++  + +   V  A +LL  +
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            Q    PN +   T I  L +A ++ E   +  Q      V DI  F  +I+   +  + 
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM-QEEGC 466
               E+F  ++ +G  P+      +++   K R F+ A+ L  EM +++GC
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC 497



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 225/453 (49%), Gaps = 8/453 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  Y+ +L  + +A + + A  L   M + G +P+  TY+T+I    K G  D A  
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M       ++V Y+ L++   K      AI +   +   G VP+L  YN+++++F 
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 371

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    + A  L+  M ++G  P+ VSY+T++    +  K  E + +  +M   NC  D+ 
Sbjct: 372 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 431

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID   +      A  LF  +++ G  P++V+YN+L+    ++  F +A +L R M
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491

Query: 256 QRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            RK+    +++TYNT+I    KS   ++A  L  +M + G+ P+ +TYS +I+   K   
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D A  + + +  +G +   + Y T+I  + + G +  A  +L  L    + P     +I
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 375 ----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
               L++ GR+ +A  +      AG V D   +  +++ F    +  + +++FE MR  G
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             PD+     ++   G L + ++  DL +E+ +
Sbjct: 672 CEPDNATYTTLV---GHLVDKKSYKDLLAEVSK 701



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 5/359 (1%)

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           R  S    PD V YNTMIN   K+    +A  L+EEM + G  P+  SY+T+L+ + + +
Sbjct: 34  REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 93

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +   AL +  +M    CP D+ +   +I+   +LD   +A R+   M + G  P+V++Y 
Sbjct: 94  RVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 153

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TL+  +        A+ L R M  +    N +TYN ++       + + A  L +EM+  
Sbjct: 154 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213

Query: 294 G-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           G   P+  TYSTI+    K+GK+D A  L + + S G   + V Y +++    + G +  
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDE 273

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  LL  + +    PN +   T I    + GRI+EA  +  +  D G   ++  +  +++
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            F +  K  + I + E M   GY P+      +L+ + K  E E A  L S M ++GCV
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 392



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 167/331 (50%), Gaps = 1/331 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P++F YN +L    +  + E A  L   M Q+G  P+  +Y+T+I    K     
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  L+QM  +    D+V ++ +I+   K      A  +F+ ++ SG  P+LV YN+++
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 132 NVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +   K++ F +A  L+ EM R+QG  PD ++Y+T+++   ++ +   A  +F +M     
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T +I+I    +     +A+ +   M K G DP  ++Y TL+  + +     +A+ 
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + +L+  K    +VVT++  I    K     +A  L++ M   G+ P+ +TY+T++  + 
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A + + A  LF+ +R  G E D   Y T++
Sbjct: 653 DASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 145/281 (51%), Gaps = 4/281 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N ++  + +  + ++A+ LF+ +++ G  P+  TY++L+    K   FD A   
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487

Query: 77  LQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L++M + +  S D++ Y+ +I+   K     +A  +F ++ S G+ PD V Y+ +I+   
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   EA  ++E M + G  P  ++Y TL++ + +     +AL +   +       D+ 
Sbjct: 548 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 607

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T +I ID   +    + A  L  +M + G+ P  V+YNTLL+ + +A    +A+ LF +M
Sbjct: 608 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
           ++   E +  TY T++   G  ++ +   +L+ E+    ++
Sbjct: 668 RQCGCEPDNATYTTLV---GHLVDKKSYKDLLAEVSKSMVD 705


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 262/524 (50%), Gaps = 9/524 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V+AY  ++   +   ++  A  +F +M + G  P   TY+ ++  +GK GM  + I
Sbjct: 29  FEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKI 88

Query: 75  SWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           + L + M+   +  D   Y+ LI   R+ S Y +A ++F  +KS G VPD V YNT+++V
Sbjct: 89  TGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDV 148

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +GK++  KEA  ++ EM   G  P  V+Y++L++ Y  +    EA+ +  +M E    LD
Sbjct: 149 YGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLD 208

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   M+  + +    + A R+F  MR  G  P++ ++N L++++G    F E + +F 
Sbjct: 209 VFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            ++      ++VT+NT++ ++G++    + + + +EM+  G  P   TY+T+I+ + + G
Sbjct: 269 EIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCG 328

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
             D+A  +++++  +G+  D   Y  ++ A  R GL   ++++L E++     P E    
Sbjct: 329 SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHC 388

Query: 374 ILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE---VFEKMR 427
            L  A   G+         +   +G ++  +V   +  L   N K   ++E    F +++
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAVL--LKTLVLVNSKCDLLLEAERAFLELK 446

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G+ PD   +  ++  YG+ +     +++ + M+E G   S   +  ++ ++   ++F 
Sbjct: 447 RKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFE 506

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             E + + + +         ++ V   Y R  R+ +AS I + M
Sbjct: 507 RSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEM 550



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 264/565 (46%), Gaps = 44/565 (7%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W    GLF+ M+  GI PD YTY+TLITC  +  
Sbjct: 60  EEEGCKPTLITYNVIL-NVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGS 118

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +++ A +  + M+      D V Y+ L+++  K     +AI +   ++ +G  P +V YN
Sbjct: 119 LYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYN 178

Query: 129 TMINVFGKAKLFKEARLL-----------------------------------IEEMREQ 153
           ++I+ + +  L +EA  L                                    EEMR  
Sbjct: 179 SLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTA 238

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G KP+  +++ L+ ++    KF E + VF E+    C  D+ T N ++ V+GQ  M  + 
Sbjct: 239 GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEV 298

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  M+++G  P   +YNTL+  Y     F +A+ +++ M    I  ++ TYN ++  
Sbjct: 299 SGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAA 358

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +    E++  ++ EMQ+   +PN +T+ +++  +    ++ R   L +++ S  +E  
Sbjct: 359 LARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            VL +T+++   +  L+  A+R   EL++    P+       I I  R   + +   +  
Sbjct: 419 AVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILN 478

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              ++G    ++ +  ++ + S+++ +    EV +++ + G  PD      V+ +Y +  
Sbjct: 479 FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNG 538

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELH 508
             + A  ++SEM+E G +     +   ++ Y A   F   ++ +   +      N+   +
Sbjct: 539 RMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYN 598

Query: 509 HVVAGIYERANRLNDASRIMNRMNK 533
            V+ G Y + NR +DA + ++ +++
Sbjct: 599 SVIDG-YCKLNRRDDAIKFISSLHE 622



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 233/492 (47%), Gaps = 12/492 (2%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I   GKEG    A S L  + +D    D+  Y++LI        Y +A+ +F +++ 
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 118 SGIVPDLVAYNTMINVFGKAKL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            G  P L+ YN ++NV+GK  + + +   L E M+  G+ PD  +Y+TL+        + 
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EA +VF +M  +    D  T N ++DVYG+    K+A  +   M   G  PS+V+YN+L+
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             Y    L  EA+ L   M  + I+ +V TY  M+  + ++ + E A  + +EM+  G +
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN  T++ +I + G  GK      +F++++      D V + T++  + + G+ +    +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301

Query: 357 LHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+++   +P      T I+  +R G  ++A  ++++  D G   D+S +  ++   +R
Sbjct: 302 FKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR 361

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
              +    ++  +M+     P+      +L++Y   +E      L  E+   G +    V
Sbjct: 362 GGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEIC-SGVIEPHAV 420

Query: 473 HFQMLSLYGARKDFNMLE---SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMN 529
             + L L  ++ D  +LE   +  E      + +   L+ ++A IY R   +   + I+N
Sbjct: 421 LLKTLVLVNSKCDL-LLEAERAFLELKRKGFSPDLSTLNAMIA-IYGRRQMVTKTNEILN 478

Query: 530 RMNKRRTFNSSL 541
            M K   F  SL
Sbjct: 479 FM-KESGFTPSL 489



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 76/393 (19%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P++  +N +++      ++     +F+E++     PD  T++TL+  FG+ GM DS
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGM-DS 296

Query: 73  AISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            +S + ++M++     +   Y+ LI    +   + +A++++ R+  +GI PDL  YN ++
Sbjct: 297 EVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVL 356

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VE 171
               +  L++++  ++ EM++   KP+ +++ +LL+ Y                    +E
Sbjct: 357 AALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIE 416

Query: 172 NHK---------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
            H                 +EA   F E+       DL+T N MI +YG+  M    + +
Sbjct: 417 PHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEI 476

Query: 217 FWSMRK-----------------------------------MGIDPSVVSYNTLLRVYGE 241
              M++                                    GI P ++SYNT++  Y  
Sbjct: 477 LNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCR 536

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA H+F  M+   +  +V+TYNT +  Y      E+A +++  M   G +PN  T
Sbjct: 537 NGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNT 596

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           Y+++I  + K  + D A     K  SS  E+DP
Sbjct: 597 YNSVIDGYCKLNRRDDAI----KFISSLHELDP 625


>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 268/584 (45%), Gaps = 53/584 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    E    +FDEM  +G+    ++Y+ L
Sbjct: 130 RSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTAL 189

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G +++++  L++M+++RVS +++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 190 INAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEG 249

Query: 120 IVPDLVAYNTMIN-----------------------------------VFGKAKLFKEAR 144
           + PDLV YNT+++                                    FGK    ++  
Sbjct: 250 VQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVA 309

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           +L++EM  +G  PD  SY+ L+  + +     EA+ VF +M    C  + +T +I++++Y
Sbjct: 310 MLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLY 369

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           G+     D   LF  M++   +P   +YN L+RV+GE   F E + LF  +  + I+ N+
Sbjct: 370 GKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            TY  ++   GK   HE A  ++  M  +GI P++  YS +I  +G+A   D A + F  
Sbjct: 430 ETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNT 489

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR 380
           +   G +     Y ++I  + R GL    + +L  +R+     N       I    ++G+
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQ 549

Query: 381 IEEATWVF------RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            EEA   F      R   D   ++ +    C   L   +K      E F +++++G  P 
Sbjct: 550 YEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESK------EQFIEIKASGILPS 603

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLF 493
                ++L  Y K   ++ A +L  EM +       QV  QM+   Y    ++ M+E +F
Sbjct: 604 VLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVF 663

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           ++L+++        ++ +        +   A+R++    KR  F
Sbjct: 664 DKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLF 707



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 199/508 (39%), Gaps = 143/508 (28%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ +  E R SP++  YN V+    R    WE   GLF EMR  G+ PD  TY+TL
Sbjct: 202 SLELLERMKRE-RVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTL 260

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ++     G+ D A    + M +  +  ++  YS ++E   KL    K   +   ++S G 
Sbjct: 261 LSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY 320

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN +I    K    KEA  + ++M+  G  P+  +YS LLNLY ++ ++ +   
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQ------------------LD-------------- 208
           +F +M E +   D TT NI+I V+G+                  +D              
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACG 440

Query: 209 ---MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-------- 257
              + +DA ++ + M   GI PS  +Y+ L+  YG+A L+ EA+  F  M          
Sbjct: 441 KGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID 500

Query: 258 ---------------KEIE------------QNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
                          KE E            +N  +++ +I+ Y +S ++E+A     EM
Sbjct: 501 TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEM 560

Query: 291 QN-----------------------------------RGIEPNAITYSTIIAIWGKAGKL 315
           +                                     GI P+ + Y  ++A++ K G+ 
Sbjct: 561 EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRW 620

Query: 316 DRAAML------------------------------------FQKLRSSGVEIDPVLYQT 339
           D A+ L                                    F KL + G       Y T
Sbjct: 621 DDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNT 680

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP 367
           ++ A   +G    A R+L E  +    P
Sbjct: 681 LLEALWWLGQKGRAARVLTEATKRGLFP 708



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 36/332 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+   P    YN+++R       ++    LF ++    I P+  TY  L+   GK G+ 
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   L  M    +      YS LIE   + + Y +A+  F+ +   G    +  YN++
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F +  L+KE   ++  MRE G+  +  S+S ++  Y ++ ++ EA+  F EM ++ C
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRC 565

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE-------AE 243
            LD  T   ++ VY    +  ++   F  ++  GI PSV+ Y  +L VY +       +E
Sbjct: 566 ELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASE 625

Query: 244 LFGEAI-----------------------------HLFRLMQRKEIEQNVVTYNTMIKIY 274
           L  E I                             ++F  +  +     +  YNT+++  
Sbjct: 626 LLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEAL 685

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
               +  +A  ++ E   RG+ P     S ++
Sbjct: 686 WWLGQKGRAARVLTEATKRGLFPELFRQSKLV 717


>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 268/584 (45%), Gaps = 53/584 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    E    +FDEM  +G+    ++Y+ L
Sbjct: 130 RSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTAL 189

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G +++++  L++M+++RVS +++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 190 INAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEG 249

Query: 120 IVPDLVAYNTMIN-----------------------------------VFGKAKLFKEAR 144
           + PDLV YNT+++                                    FGK    ++  
Sbjct: 250 VQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVA 309

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           +L++EM  +G  PD  SY+ L+  + +     EA+ VF +M    C  + +T +I++++Y
Sbjct: 310 MLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLY 369

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           G+     D   LF  M++   +P   +YN L+RV+GE   F E + LF  +  + I+ N+
Sbjct: 370 GKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            TY  ++   GK   HE A  ++  M  +GI P++  YS +I  +G+A   D A + F  
Sbjct: 430 ETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNT 489

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR 380
           +   G +     Y ++I  + R GL    + +L  +R+     N       I    ++G+
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQ 549

Query: 381 IEEATWVF------RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            EEA   F      R   D   ++ +    C   L   +K      E F +++++G  P 
Sbjct: 550 YEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESK------EQFIEIKASGILPS 603

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLF 493
                ++L  Y K   ++ A +L  EM +       QV  QM+   Y    ++ M+E +F
Sbjct: 604 VLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVF 663

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           ++L+++        ++ +        +   A+R++    KR  F
Sbjct: 664 DKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLF 707



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 199/508 (39%), Gaps = 143/508 (28%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ +  E R SP++  YN V+    R    WE   GLF EMR  G+ PD  TY+TL
Sbjct: 202 SLELLERMKRE-RVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTL 260

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ++     G+ D A    + M +  +  ++  YS ++E   KL    K   +   ++S G 
Sbjct: 261 LSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY 320

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN +I    K    KEA  + ++M+  G  P+  +YS LLNLY ++ ++ +   
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQ------------------LD-------------- 208
           +F +M E +   D TT NI+I V+G+                  +D              
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACG 440

Query: 209 ---MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-------- 257
              + +DA ++ + M   GI PS  +Y+ L+  YG+A L+ EA+  F  M          
Sbjct: 441 KGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID 500

Query: 258 ---------------KEIE------------QNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
                          KE E            +N  +++ +I+ Y +S ++E+A     EM
Sbjct: 501 TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEM 560

Query: 291 QN-----------------------------------RGIEPNAITYSTIIAIWGKAGKL 315
           +                                     GI P+ + Y  ++A++ K G+ 
Sbjct: 561 EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRW 620

Query: 316 DRAAML------------------------------------FQKLRSSGVEIDPVLYQT 339
           D A+ L                                    F KL + G       Y T
Sbjct: 621 DDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNT 680

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP 367
           ++ A   +G    A R+L E  +    P
Sbjct: 681 LLEALWWLGQKGRAARVLTEATKRGLFP 708



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 36/332 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+   P    YN+++R       ++    LF ++    I P+  TY  L+   GK G+ 
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   L  M    +      YS LIE   + + Y +A+  F+ +   G    +  YN++
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F +  L+KE   ++  MRE G+  +  S+S ++  Y ++ ++ EA+  F EM ++ C
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRC 565

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE-------AE 243
            LD  T   ++ VY    +  ++   F  ++  GI PSV+ Y  +L VY +       +E
Sbjct: 566 ELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASE 625

Query: 244 LFGEAI-----------------------------HLFRLMQRKEIEQNVVTYNTMIKIY 274
           L  E I                             ++F  +  +     +  YNT+++  
Sbjct: 626 LLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEAL 685

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
               +  +A  ++ E   RG+ P     S ++
Sbjct: 686 WWLGQKGRAARVLTEATKRGLFPELFRQSKLV 717


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 234/461 (50%), Gaps = 7/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W    GLF+ M+  G+ PD YTY+TLITC  +  
Sbjct: 60  EEEGCKPTLITYNVIL-NVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGS 118

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           + + A +  + M+      D V Y+ L+++  K     +A+ +   ++ +G  P +V YN
Sbjct: 119 LHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYN 178

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+ + +  L KEA  L  +M E G+  D  +Y+TLL+ +V   K   A+ VFAEM   
Sbjct: 179 SLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAA 238

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C  ++ T N +I ++G      +  ++F  ++     P +V++NTLL V+G+  +  E 
Sbjct: 239 GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEV 298

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F+ M+R        TYNT+I  Y +    ++A ++ + M   GI P+  TY+ ++A 
Sbjct: 299 SGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAA 358

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY---ERVG-LVAHAKRLLHELRQPN 364
             + G  +++  +F +++    + + + Y +++ AY   + +G ++A A+ +   + +P+
Sbjct: 359 LARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +  +T + + ++   + EA   F +    G   D+S    M+ ++ R + +    E+  
Sbjct: 419 AVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILN 478

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            M  +G+ P       ++  + +   FE ++++  E+  +G
Sbjct: 479 FMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKG 519



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 259/520 (49%), Gaps = 9/520 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL- 77
           V+AY  ++   +   ++  A  +F +M + G  P   TY+ ++  +GK GM  + I  L 
Sbjct: 33  VYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLF 92

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+   V  D   Y+ LI   R+ S + +A ++F  +KS G VPD V YN +++V+GK+
Sbjct: 93  EGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKS 152

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +  KEA  ++ EM   G  P  V+Y++L++ Y  +    EA+ +  +M E    LD+ T 
Sbjct: 153 RRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTY 212

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++  + +    + A R+F  MR  G  P++ ++N L++++G    F E + +F  ++ 
Sbjct: 213 TTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKN 272

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                ++VT+NT++ ++G++    + + + +EM+  G  P   TY+T+I+ + + G  D+
Sbjct: 273 SCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQ 332

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  +++++  +G+  D   Y  ++ A  R GL   ++++  E++     P E     L  
Sbjct: 333 AMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLH 392

Query: 378 A---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE---VFEKMRSAGY 431
           A   G+         +   +G ++  +V   +  L   N K   ++E    F +++  G+
Sbjct: 393 AYANGKEIGRMLALAEEICSGVIEPHAVL--LKTLVLVNSKCDLLVEAEVAFLELKRKGF 450

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD   +  +L+ YG+ + F   +++ + M E G   S   +  ++ ++   ++F   E 
Sbjct: 451 SPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEE 510

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + + + +         ++ V   Y R  R+ +ASRI + M
Sbjct: 511 VLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEM 550



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 234/491 (47%), Gaps = 10/491 (2%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I+  GKEG    A S L  + +D    D+  Y++LI        Y +A+ +F +++ 
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 118 SGIVPDLVAYNTMINVFGKAKL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            G  P L+ YN ++NV+GK  + + + + L E M+  GV PD  +Y+TL+          
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EA +VF +M  +    D  T N ++DVYG+    K+A  +   M   G  PS+V+YN+L+
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             Y    L  EA+ L   M    I  +V TY T++  + ++ + E A  +  EM+  G +
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN  T++ +I + G  GK      +F+++++S    D V + T++  + + G+ +    +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301

Query: 357 LHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+++   +P      T I+  +R G  ++A  ++++  +AG   D+S +  ++   +R
Sbjct: 302 FKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALAR 361

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
              +    ++F +M+     P+      +L++Y   +E      L  E+   G +    V
Sbjct: 362 GGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEIC-SGVIEPHAV 420

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA--GIYERANRLNDASRIMNR 530
             + L L  ++ D  ++E+    L+        +L  + A   IY R       + I+N 
Sbjct: 421 LLKTLVLVNSKCDL-LVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNF 479

Query: 531 MNKRRTFNSSL 541
           MN+   F  SL
Sbjct: 480 MNE-SGFTPSL 489



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 218/452 (48%), Gaps = 4/452 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+  YN ++    R    + A  L ++M + GI  D +TY+TL++ F + G  +SA+ 
Sbjct: 171 SPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMR 230

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       ++  ++ LI++      +++ + +F  +K+S  VPD+V +NT++ VFG
Sbjct: 231 VFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFG 290

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +  +  E   + +EM+  G  P+  +Y+TL++ Y     F +A+ ++  M E     DL+
Sbjct: 291 QNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLS 350

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++    +  + + ++++F  M+     P+ ++Y +LL  Y   +  G  + L   +
Sbjct: 351 TYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEI 410

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               IE + V   T++ +  K     +A     E++ +G  P+  T + +++I+G+    
Sbjct: 411 CSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMF 470

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            +   +   +  SG       Y +++  + R      ++ +L E+     +P+TI   T 
Sbjct: 471 TKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTV 530

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R GR++EA+ +F +  ++G V D+  +   +  ++ +  + + I+V   M   G 
Sbjct: 531 IFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGC 590

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            P+ +    V++ Y K    + A    S + E
Sbjct: 591 KPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 169/394 (42%), Gaps = 78/394 (19%)

Query: 13  ARYSPSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           A   P++  +N +++ +  R K  E+   +F+E++     PD  T++TL+  FG+ GM D
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMK-VFEEIKNSCCVPDIVTWNTLLAVFGQNGM-D 295

Query: 72  SAISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           S +S + ++M++     +   Y+ LI    +   + +A+ I+ R+  +GI PDL  YN +
Sbjct: 296 SEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAV 355

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------V 170
           +    +  L++++  +  EM++   KP+ ++Y +LL+ Y                    +
Sbjct: 356 LAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVI 415

Query: 171 ENHK---------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           E H                 VEA   F E+       DL+T N M+ +YG+  M    + 
Sbjct: 416 EPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNE 475

Query: 216 LFWSMRKMGIDPSV-----------------------------------VSYNTLLRVYG 240
           +   M + G  PS+                                   +SYNT++  Y 
Sbjct: 476 ILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYC 535

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                 EA  +F  M+   +  +V+TYNT +  Y      E A ++++ M   G +PN  
Sbjct: 536 RNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQN 595

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           TY++++  + K    D A M    L     E+DP
Sbjct: 596 TYNSVVDGYCKHNHRDDAIMFISSLH----ELDP 625


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 239/459 (52%), Gaps = 26/459 (5%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           ++++  + R  + E+A  +F+  ++ G   + Y YS +++ +G+ G    A+   Q M++
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262

Query: 83  DRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                +L+ Y+ +I+   K   D  KA+ IF  ++  G+ PD + +N++I V  +  L++
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +++ +  EM+ +G++ D  +Y+TL++   +  +   A S+ + M   N   ++ T + MI
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D YG+L   ++A  L+  M++ G+ P  VSYNTL+ +Y +   F +A+   + M+R  ++
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +VVTYN +I  YGK  +++ A  L  +M+  G+ PN +TYS +I  + KAG    A  +
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
           F + + +G++ D VLY ++I +  + GLV  A  LL E+     QPN +   + I    R
Sbjct: 503 FVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 562

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCM----IELFSR---NKKYAN-------VIEVF 423
            G+++           A     I+VF  +     E+  +   +++ AN        + VF
Sbjct: 563 NGQVDNVE-------AAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVF 615

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +M+  G  P+    + +LN+  +    + A  L  +M+
Sbjct: 616 HEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMR 654



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 211/393 (53%), Gaps = 14/393 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           ++A   P++  YN ++    +     + A  +F+EM++ G+ PDR T+++LI    +  +
Sbjct: 261 KKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSL 320

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           ++ +     +M++  +  D+  Y+ LI+   K      A SI S ++   I P++V Y+T
Sbjct: 321 WEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYST 380

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI+ +GK   F+EA  L  +M+E GV+PD VSY+TL+++Y +  +F +AL+   +M  V 
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T N +ID YG+    KDA  LF  M+  G+ P+V++Y+ L+  Y +A +  +A 
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F   +R  ++ +VV Y+++I    K    E A  L+QEM   GI+PN +TY+++I  +
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560

Query: 310 GKAGKLDRAAM--------LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           G+ G++D            +F K+     EI      +   A +  G++A A  + HE++
Sbjct: 561 GRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLA-AVSVFHEMQ 619

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQ 390
           Q    PN +     +   +R   ++EA+ +  Q
Sbjct: 620 QFGLKPNVVTFSAILNACSRCSSLQEASVLLEQ 652



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 220/423 (52%), Gaps = 21/423 (4%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT--YSTLITCFGKEGMFDSAISWLQQ 79
           +  +LR +    +WE A   ++ M Q+G     ++   S +I+  G+ G  + A+    +
Sbjct: 165 FPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNR 224

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
            ++     ++  YS ++    +     +A+ +F  +K +G  P+L+ YNT+I+  GK  +
Sbjct: 225 AQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGV 284

Query: 140 -FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             K+A  + EEM+++GV+PD +++++L+ +      + ++  VFAEM       D+ T N
Sbjct: 285 DLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYN 344

Query: 199 IMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            +ID     GQ+++A     +  SMR   I P+VV+Y+T++  YG+   F EAI L+  M
Sbjct: 345 TLIDAVCKGGQMELAAS---IMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDM 401

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  + V+YNT+I IY K    + A    ++M+  G++ + +TY+ +I  +GK GK 
Sbjct: 402 KESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKY 461

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             AA LF K+++ G+  + + Y  +I AY + G+   A  +  E +    +P+ +   + 
Sbjct: 462 KDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSL 521

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV--------IEVF 423
           I    + G +E+A  + ++   AG   +I  +  +I+ + RN +  NV        I VF
Sbjct: 522 IDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVF 581

Query: 424 EKM 426
            K+
Sbjct: 582 NKV 584



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 202/423 (47%), Gaps = 50/423 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N ++    R   WE +  +F EM++RGI  D +TY+TLI    K G  + A S 
Sbjct: 303 PDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASI 362

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  M    +S ++V YS +I+   KL  + +AI ++  +K SG+ PD V+YNT+I+++ K
Sbjct: 363 MSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAK 422

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F +A    ++M   G+K D V+Y+ L++ Y +  K+ +A  +F +M       ++ T
Sbjct: 423 LGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLT 482

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y +  M +DA  +F   ++ G+ P VV Y++L+    +  L  +A+ L + M 
Sbjct: 483 YSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT 542

Query: 257 RKEIEQNVVTYNTMIKIYG--------------------------------KSLEHEK-- 282
           +  I+ N+VTYN++I  YG                                K+L  ++  
Sbjct: 543 QAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNA 602

Query: 283 --------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                   A ++  EMQ  G++PN +T+S I+    +   L  A++L +++R     +  
Sbjct: 603 NDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYG 662

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           + +  ++   E V +   A+RL  E      I R    T  A    + +  W F Q   A
Sbjct: 663 IAHGLLMGLREHVWV--EAQRLFDE------IARMDYATGAAFYNALTDVLWHFGQRQGA 714

Query: 395 GEV 397
            EV
Sbjct: 715 QEV 717



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 188/362 (51%), Gaps = 5/362 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L     A+ +F+R + +G   ++ AY+ M++ +G++   +EA  + + M
Sbjct: 201 LASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAM 260

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           ++ G KP+ ++Y+T+++   +      +AL +F EM +     D  T N +I V  +  +
Sbjct: 261 KKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSL 320

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +D+ R+F  M++ GI+  + +YNTL+    +      A  +   M+ K I  NVVTY+T
Sbjct: 321 WEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYST 380

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           MI  YGK    E+A  L  +M+  G+ P+ ++Y+T+I I+ K G+ D A    + +   G
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           ++ D V Y  +I AY + G    A  L  +++     PN +     I   ++AG  ++AT
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F +   AG   D+ ++  +I+   +     + + + ++M  AG  P+      ++++Y
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560

Query: 446 GK 447
           G+
Sbjct: 561 GR 562



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 164/322 (50%), Gaps = 9/322 (2%)

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +R +  K  ++  STL  L     K   AL VF    +     ++   + M+  YG+  
Sbjct: 193 HLRSEWSKLASIMISTLGRL----GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSG 248

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHLFRLMQRKEIEQNVVTY 267
             ++A ++F +M+K G  P++++YNT++   G+  +   +A+ +F  MQ++ +E + +T+
Sbjct: 249 RCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITF 308

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N++I +  +    E +  +  EMQ RGIE +  TY+T+I    K G+++ AA +   +R 
Sbjct: 309 NSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRL 368

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
             +  + V Y TMI  Y ++G    A  L H++++    P+ +   T I I A+ GR ++
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 428

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A    +     G   D+  +  +I+ + +  KY +   +F+KM++ G  P+    + +++
Sbjct: 429 ALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALID 488

Query: 444 SYGKLREFETADDLYSEMQEEG 465
           +Y K    + A  ++ E +  G
Sbjct: 489 AYSKAGMHQDATSIFVEFKRAG 510



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 9/300 (3%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +TL R+ G+ E+   A+ +F   Q+     NV  Y+ M+  YG+S    +A  + Q M+ 
Sbjct: 207 STLGRL-GKVEI---ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262

Query: 293 RGIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            G +PN ITY+TII   GK G  L +A  +F++++  GVE D + + ++I    R  L  
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322

Query: 352 HAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            ++R+  E++    + +     T I  + + G++E A  +           ++  +  MI
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + + +   +   I ++  M+ +G  PD      +++ Y KL  F+ A     +M+  G  
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
                +  ++  YG +  +     LF+++ ++  +     +  +   Y +A    DA+ I
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 239/496 (48%), Gaps = 42/496 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W    GL D M+  G+APD YTY+TLI+   +  
Sbjct: 247 EEEGCRPTLITYNVIL-NVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGS 305

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +++ A    ++M+    S D V Y+ L+++  K     +A+ +   +++SG  P +V YN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK-------------- 174
           ++I+ + +  L  EA  L  +M ++G+KPD  +Y+TLL+ + +  K              
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425

Query: 175 ---------------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
                                FVE + VF E+    C  D+ T N ++ V+GQ  M  + 
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  M++ G  P   ++NTL+  Y     F +A+ ++R M    +  ++ TYN ++  
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +    E++  ++ EM++   +PN +TY +++  +    +++R + L +++ S  +E  
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            VL +T+++ Y +  L+   +R   ELR+    P+       ++I  R   + +   +  
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              D+G    ++ +  ++ ++SR + +    ++  ++ + G  PD      V+ +Y +  
Sbjct: 666 FIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNG 725

Query: 450 EFETADDLYSEMQEEG 465
             + A  +++EM++ G
Sbjct: 726 RMKEASRIFAEMKDFG 741



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 258/518 (49%), Gaps = 5/518 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL- 77
           ++AY  ++       ++  A  +F ++ + G  P   TY+ ++  +GK GM  S I+ L 
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             M+   V+ DL  Y+ LI   R+ S Y +A  +F  +K++G  PD V YN +++V+GK+
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +  +EA  +++EM   G  P  V+Y++L++ Y  +    EA+ + ++M +     D+ T 
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTY 399

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++  + +      A ++F  MR  G  P++ ++N L++++G    F E + +F  ++ 
Sbjct: 400 TTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKI 459

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
            E   ++VT+NT++ ++G++    + + + +EM+  G  P   T++T+I+ + + G  D+
Sbjct: 460 CECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQ 519

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  +++++  +GV  D   Y  ++ A  R GL   ++++L E++     P E     L  
Sbjct: 520 AMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLH 579

Query: 378 A---GRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           A   G+  E      +   +G ++  +V    ++ ++S++         F ++R  G+ P
Sbjct: 580 AYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSP 639

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D   +  +++ YG+ R     +++ + +++ G   S   +  ++ +Y   + F   E + 
Sbjct: 640 DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL 699

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             + +          + V   Y R  R+ +ASRI   M
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 224/456 (49%), Gaps = 12/456 (2%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQR---GIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +++ ++  K+ ELA  +F  +R R            + +I+  GKEG    A S L  + 
Sbjct: 153 IIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLR 212

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-F 140
            D V  D+  Y++LI        Y +A+ +F +L+  G  P L+ YN ++NV+GK  + +
Sbjct: 213 NDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPW 272

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +   L++ M+  GV PD  +Y+TL++       + EA  VF EM       D  T N +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           +DVYG+    ++A  +   M   G  PS+V+YN+L+  Y    L  EA+ L   M +K I
Sbjct: 333 LDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI 392

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + +V TY T++  + K+ + + A  + +EM+  G +PN  T++ +I + G  G       
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILA 376
           +F++++      D V + T++  + + G+ +    +  E+++   +P      T I+  +
Sbjct: 453 VFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 512

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G  ++A  ++R+  DAG   D+S +  ++   +R   +    +V  +M+     P+  
Sbjct: 513 RCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNEL 572

Query: 437 IIALVLNSYGKLREFE----TADDLYSEMQEEGCVF 468
               +L++Y   +E E     A+++YS + E   V 
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL 608



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 206/448 (45%), Gaps = 74/448 (16%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E + ++PS+  YN ++    R    + A  L  +M ++GI PD +TY+TL++ F K G  
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKD 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M       ++  ++ LI++     ++ + + +F  +K    VPD+V +NT+
Sbjct: 413 DYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF-------- 182
           + VFG+  +  E   + +EM+  G  P+  +++TL++ Y     F +A++++        
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532

Query: 183 ---------------------------AEMNEVNC-PLDLTTCNIM-------------- 200
                                      AEM +  C P +LT C+++              
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592

Query: 201 --------------------IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                               + VY + D+  + +R F  +R+ G  P + + N ++ +YG
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG 652

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
              +  +   +   ++      ++ TYN+++ +Y ++   EK+ ++++E+  +G++P+ I
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRL 356
           +++T+I  + + G++  A+ +F +++  G+  D + Y T I +Y    +   A    K +
Sbjct: 713 SFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772

Query: 357 LHELRQPNTIPRETAITILARAGRIEEA 384
           +    +PN     + I    +  R +EA
Sbjct: 773 IKNECKPNQNTYNSLIDWFCKLNRRDEA 800



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 139/283 (49%), Gaps = 4/283 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF--GKEGM 69
           +A  +P +  YN VL  + R   WE +  +  EM+     P+  TY +L+  +  GKE  
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             SA++  +++    +    VL   L+ +  K    ++    F  L+  G  PD+   N 
Sbjct: 589 RMSALA--EEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M++++G+ ++  +   ++  +++ G  P   +Y++L+ +Y     F ++  +  E+    
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ + N +I  Y +    K+A R+F  M+  G+ P V++YNT +  Y    +F EAI
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            + + M + E + N  TYN++I  + K    ++A + +  ++N
Sbjct: 767 DVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRN 809



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 39/353 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N +L    +        G+F EM++ G  P+R T++TLI+ + + G FD A++ 
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    V+ DL  Y+ ++    +   + ++  + + +K     P+ + Y ++++ +  
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  +    L EE+    ++P  V   TL+ +Y ++    E    F E+ E     D+TT
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF----------- 245
            N M+ +YG+  M    + +   ++  G  PS+ +YN+L+ +Y   E F           
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703

Query: 246 ------------------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                                    EA  +F  M+   +  +V+TYNT I  Y       
Sbjct: 704 AKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFI 763

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           +A ++++ M     +PN  TY+++I  + K  + D A      LR+    +DP
Sbjct: 764 EAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRN----LDP 812



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 157/338 (46%), Gaps = 5/338 (1%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++I V G+   A  A  L   +R  G+   + +Y +L+  Y     + EA+ +F+ ++ +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249

Query: 259 EIEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                ++TYN ++ +YGK  +   K   L+  M++ G+ P+  TY+T+I+   +    + 
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           AA +F++++++G   D V Y  ++  Y +      A  +L E+      P+ +   + I+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
             AR G ++EA  +  Q    G   D+  +  ++  F +  K    ++VFE+MR AG  P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           +      ++  +G    F     ++ E++   CV        +L+++G     + +  +F
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +     + +++  + +   Y R    + A  I  RM
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRM 527



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F E+R++G +PD  T + +++ +G+  M       L  ++    +  L  Y++L+ +  +
Sbjct: 629 FLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSR 688

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
              + K+  I   + + G+ PD++++NT+I  + +    KEA  +  EM++ G+ PD ++
Sbjct: 689 TEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVIT 748

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T +  Y  +  F+EA+ V   M +  C  +  T N +ID + +L+   +A+    ++R
Sbjct: 749 YNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLR 808

Query: 222 KMGIDPSVV 230
            +  DPSV 
Sbjct: 809 NL--DPSVT 815



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 89/178 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +SP +   N ++    R +     + + + ++  G  P   TY++L+  + +   F+
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            +   L+++    +  D++ ++ +I    +     +A  IF+ +K  G+ PD++ YNT I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
             +    +F EA  +++ M +   KP+  +Y++L++ + + ++  EA S  + +  ++
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLD 811


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 239/496 (48%), Gaps = 42/496 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           EE    P++  YNV+L NV       W    GL D M+  G+APD YTY+TLI+   +  
Sbjct: 247 EEEGCRPTLITYNVIL-NVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGS 305

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           +++ A    ++M+    S D V Y+ L+++  K     +A+ +   +++SG  P +V YN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK-------------- 174
           ++I+ + +  L  EA  L  +M ++G+KPD  +Y+TLL+ + +  K              
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425

Query: 175 ---------------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
                                FVE + VF E+    C  D+ T N ++ V+GQ  M  + 
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  M++ G  P   ++NTL+  Y     F +A+ ++R M    +  ++ TYN ++  
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +    E++  ++ EM++   +PN +TY +++  +    +++R + L +++ S  +E  
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQ 605

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            VL +T+++ Y +  L+   +R   ELR+    P+       ++I  R   + +   +  
Sbjct: 606 AVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN 665

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              D+G    ++ +  ++ ++SR + +    ++  ++ + G  PD      V+ +Y +  
Sbjct: 666 FIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNG 725

Query: 450 EFETADDLYSEMQEEG 465
             + A  +++EM++ G
Sbjct: 726 RMKEASRIFAEMKDFG 741



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 258/518 (49%), Gaps = 5/518 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL- 77
           ++AY  ++       ++  A  +F ++ + G  P   TY+ ++  +GK GM  S I+ L 
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             M+   V+ DL  Y+ LI   R+ S Y +A  +F  +K++G  PD V YN +++V+GK+
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +  +EA  +++EM   G  P  V+Y++L++ Y  +    EA+ + ++M +     D+ T 
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTY 399

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++  + +      A ++F  MR  G  P++ ++N L++++G    F E + +F  ++ 
Sbjct: 400 TTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKI 459

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
            E   ++VT+NT++ ++G++    + + + +EM+  G  P   T++T+I+ + + G  D+
Sbjct: 460 CECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQ 519

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  +++++  +GV  D   Y  ++ A  R GL   ++++L E++     P E     L  
Sbjct: 520 AMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLH 579

Query: 378 A---GRIEEATWVFRQAFDAGEVKDISVF-GCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           A   G+  E      +   +G ++  +V    ++ ++S++         F ++R  G+ P
Sbjct: 580 AYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSP 639

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D   +  +++ YG+ R     +++ + +++ G   S   +  ++ +Y   + F   E + 
Sbjct: 640 DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL 699

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             + +          + V   Y R  R+ +ASRI   M
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 224/456 (49%), Gaps = 12/456 (2%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQR---GIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +++ ++  K+ ELA  +F  +R R            + +I+  GKEG    A S L  + 
Sbjct: 153 IIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLR 212

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-F 140
            D V  D+  Y++LI        Y +A+ +F +L+  G  P L+ YN ++NV+GK  + +
Sbjct: 213 NDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPW 272

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +   L++ M+  GV PD  +Y+TL++       + EA  VF EM       D  T N +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           +DVYG+    ++A  +   M   G  PS+V+YN+L+  Y    L  EA+ L   M +K I
Sbjct: 333 LDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI 392

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + +V TY T++  + K+ + + A  + +EM+  G +PN  T++ +I + G  G       
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILA 376
           +F++++      D V + T++  + + G+ +    +  E+++   +P      T I+  +
Sbjct: 453 VFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 512

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G  ++A  ++R+  DAG   D+S +  ++   +R   +    +V  +M+     P+  
Sbjct: 513 RCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNEL 572

Query: 437 IIALVLNSYGKLREFE----TADDLYSEMQEEGCVF 468
               +L++Y   +E E     A+++YS + E   V 
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL 608



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 208/441 (47%), Gaps = 39/441 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E + ++PS+  YN ++    R    + A  L  +M ++GI PD +TY+TL++ F K G  
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKD 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M       ++  ++ LI++     ++ + + +F  +K    VPD+V +NT+
Sbjct: 413 DYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + VFG+  +  E   + +EM+  G  P+  +++TL++ Y     F +A++++  M +   
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR-------------------------KMG- 224
             DL+T N ++    +  + + ++++   M+                         +M  
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592

Query: 225 ---------IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
                    I+P  V   TL+ VY +++L  E    F  ++ +    ++ T N M+ IYG
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG 652

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           +     K   ++  +++ G  P+  TY++++ ++ +    +++  + +++ + G++ D +
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
            + T+I AY R G +  A R+  E++     P+ I   T I   A      EA  V +  
Sbjct: 713 SFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772

Query: 392 FDAGEVKDISVFGCMIELFSR 412
              G   + + +  +I+ F +
Sbjct: 773 IKNGCKPNQNTYNSLIDWFCK 793



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 173/346 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N +L    +        G+F EM++ G  P+R T++TLI+ + + G FD A++ 
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    V+ DL  Y+ ++    +   + ++  + + +K     P+ + Y ++++ +  
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  +    L EE+    ++P  V   TL+ +Y ++    E    F E+ E     D+TT
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M+ +YG+  M    + +   ++  G  PS+ +YN+L+ +Y   E F ++  + R + 
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K ++ +++++NT+I  Y ++   ++A+ +  EM++ G+ P+ ITY+T IA +       
Sbjct: 704 AKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFI 763

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            A  + + +  +G + +   Y ++I  + ++     A   +  LR 
Sbjct: 764 EAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRN 809



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 139/283 (49%), Gaps = 4/283 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF--GKEGM 69
           +A  +P +  YN VL  + R   WE +  +  EM+     P+  TY +L+  +  GKE  
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             SA++  +++    +    VL   L+ +  K    ++    F  L+  G  PD+   N 
Sbjct: 589 RMSALA--EEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M++++G+ ++  +   ++  +++ G  P   +Y++L+ +Y     F ++  +  E+    
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ + N +I  Y +    K+A R+F  M+  G+ P V++YNT +  Y    +F EAI
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            + + M +   + N  TYN++I  + K    ++A++ +  ++N
Sbjct: 767 DVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRN 809



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 157/338 (46%), Gaps = 5/338 (1%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++I V G+   A  A  L   +R  G+   + +Y +L+  Y     + EA+ +F+ ++ +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249

Query: 259 EIEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                ++TYN ++ +YGK  +   K   L+  M++ G+ P+  TY+T+I+   +    + 
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           AA +F++++++G   D V Y  ++  Y +      A  +L E+      P+ +   + I+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
             AR G ++EA  +  Q    G   D+  +  ++  F +  K    ++VFE+MR AG  P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           +      ++  +G    F     ++ E++   CV        +L+++G     + +  +F
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVF 489

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +     + +++  + +   Y R    + A  I  RM
Sbjct: 490 KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRM 527



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 100/189 (52%), Gaps = 2/189 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F E+R++G +PD  T + +++ +G+  M       L  ++    +  L  Y++L+ +  +
Sbjct: 629 FLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSR 688

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
              + K+  I   + + G+ PD++++NT+I  + +    KEA  +  EM++ G+ PD ++
Sbjct: 689 TEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVIT 748

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T +  Y  +  F+EA+ V   M +  C  +  T N +ID + +L+   +A     ++R
Sbjct: 749 YNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLR 808

Query: 222 KMGIDPSVV 230
            +  DPSV 
Sbjct: 809 NL--DPSVT 815



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 90/178 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +SP +   N ++    R +     + + + ++  G  P   TY++L+  + +   F+
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            +   L+++    +  D++ ++ +I    +     +A  IF+ +K  G+ PD++ YNT I
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
             +    +F EA  +++ M + G KP+  +Y++L++ + + ++  EA S  + +  ++
Sbjct: 754 ASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLD 811


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/575 (24%), Positives = 267/575 (46%), Gaps = 44/575 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++V   DW   +  Y  S F  N +L   +R K+ + A+ LF   R    +PD  TYSTL
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTL 173

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS--IFSRLKSS 118
           I  F K   F  A   L +ME+  +     +Y+ +I   + L D  +  S  +  R    
Sbjct: 174 INGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII---KGLCDNGRVDSALVHYRDMQR 230

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
              P ++ Y  +++   K+    +A L++E+M E G  P+ V+Y+TL+N + +     EA
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           + +F +M E +C  D+ T NI+ID Y + +  +D  +L   M K G +P+ ++YNTL+  
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR----- 293
             ++  + +A +L ++M R++ + +  T+N MI ++ K  + + A  L Q M +R     
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 410

Query: 294 ------------------------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
                                         G  P+ +TY++I++   KA ++D A  +++
Sbjct: 411 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 470

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAG 379
            LR+ G  +D V   T+I    +   +  A++LL E+ +  + P   A TIL     +A 
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 530

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +++++   F +  D G V  +  +  +I+   ++ +  +   + + M   G  PD+ +  
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYT 590

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
            V++   K   ++ A +LY  M++ GC  +   +  ++         +    L E ++SD
Sbjct: 591 SVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESD 650

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
             +     ++ V   + ++   + A R+   M  R
Sbjct: 651 GCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 180/334 (53%), Gaps = 3/334 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS F +N+++    +  Q +LA+ LF  M  RG  PD YTY+ +I+   +    D A   
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M +     D+V Y++++    K S   +A  ++  L++ G   D+V  +T+I+   K
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           ++   +A  L+ EM   G  PD V+Y+ L++ + +  +  ++L+ F+EM +  C   + T
Sbjct: 494 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 553

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+ID   +    +D   L  +M + G+ P  + Y +++    +++ + EA  L++LM+
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +      VVTYN ++    K    ++A +L++ M++ G  P+ +TY+++   + K+ + D
Sbjct: 614 QTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHD 673

Query: 317 RAAMLFQKLRSSGVEIDPVLYQ---TMIVAYERV 347
           +A  LFQ ++S G    P +Y    T +VA E++
Sbjct: 674 KAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKM 707



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 218/467 (46%), Gaps = 4/467 (0%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A++ + + +   +PSV  Y +++  + ++ +   A  + ++M + G AP+  TY+TLI  
Sbjct: 221 ALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F K G  D A+    QM ++  S D+  Y+ LI+   K         +   +   G  P+
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
            + YNT+++   K+  + +A  L + M  +  KP   +++ +++++ +  +   A  +F 
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M +  C  D+ T NIMI    + +   DA +L   M + G  P VV+YN+++    +A 
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 460

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  ++ +++      +VVT +T+I    KS   + A  L++EM+  G  P+ + Y+
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            +I  + KA +LD++   F ++   G     + Y  +I    +   V     LL  + + 
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P+ I   + I  L ++   +EA  +++     G    +  +  +++   +  +    
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I + E M S G  PD+     V + + K  E + A  L+  M+  GC
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGC 687



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 200/454 (44%), Gaps = 31/454 (6%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP VF YN+++    + ++ +    L  EM + G  P+  TY+TL+    K G + 
Sbjct: 299 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 358

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +  Q M +         ++ +I++  K+     A  +F  +   G +PD+  YN MI
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +A    +AR L+E M E G  PD V+Y+++++   +  +  EA  V+  +      
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD+ TC+ +ID   +     DA++L   M + G  P VV+Y  L+  + +A+   +++  
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  K     V+TY+ +I    KS        L++ M  RG+ P+AI Y+++I    K
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +   D A  L++ ++ +G     V Y  ++    +V  +  A  LL  +     +P    
Sbjct: 599 SDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD--- 655

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                        T  +   FD                F ++ ++     +F+ M+S G 
Sbjct: 656 -------------TVTYNSVFDG---------------FWKSAEHDKAFRLFQAMKSRGC 687

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P   + +L+L       + + A +++ E  E G
Sbjct: 688 SPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 162/327 (49%), Gaps = 6/327 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P ++ YN+++    RA + + A  L + M + G  PD  TY+++++   K    D A   
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468

Query: 77  LQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + +       D+V  S LI+    +R+L D  K   +   ++ +G  PD+VAY  +I+ 
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK---LLREMERNGSAPDVVAYTILIHG 525

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F KA    ++     EM ++G  P  ++YS +++   ++ +  +   +   M E     D
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPD 585

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                 +ID   + D   +A  L+  M++ G  P+VV+YN L+    +     EAIHL  
Sbjct: 586 AIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE 645

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M+      + VTYN++   + KS EH+KA  L Q M++RG  P    YS ++       
Sbjct: 646 VMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           K+D+A  ++++   +G ++DP + +T+
Sbjct: 706 KMDQAMEIWEEALEAGADVDPEISRTL 732



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 155/337 (45%), Gaps = 8/337 (2%)

Query: 203 VYGQLDMAKDADRLF-WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           V  QLD    A + F W   + G   S  + N LL  +   +   EA  LF+  +     
Sbjct: 105 VLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCS 164

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            + +TY+T+I  + K+ + ++A  L+ EM+ RGI P+   Y+TII      G++D A + 
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 322 FQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILA 376
           ++ + R+    +  + Y  ++ A  +   ++ A  +L ++ +    PN +   T I    
Sbjct: 225 YRDMQRNCAPSV--ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G ++EA  +F Q  +     D+  +  +I+ + + ++  +  ++ ++M   G  P+  
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
               +++S  K  ++  A +L   M    C  S      M+ ++      ++   LF+ +
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                +     ++++     RANR++DA +++ RM +
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE 439



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    Y  V+  + ++  ++ A+ L+  M+Q G AP   TY+ L+    K    D AI 
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIH 642

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ ME D    D V Y+++ +   K +++ KA  +F  +KS G  P    Y+ ++    
Sbjct: 643 LLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV 702

Query: 136 KAKLFKEARLLIEEMREQGVKPD 158
             +   +A  + EE  E G   D
Sbjct: 703 AEEKMDQAMEIWEEALEAGADVD 725


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 249/508 (49%), Gaps = 20/508 (3%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD  ++  R  P+V  +  ++  + R  +   A  L D M + G+ P++ TY T++    
Sbjct: 167 LDLFHQMCR--PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 224

Query: 66  KEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           K G   SA++ L++ME+   +  ++V+YS +I+   K   +S A ++++ ++  GI PDL
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDL 284

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             YN MI+ F  +  + EA+ L++EM E+ + P+ V+YS L+N YV+  KF EA  ++ E
Sbjct: 285 FTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDE 344

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       +  T N MID + + +    A+ +F+ M   G  P V ++NTL+  Y  A+ 
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +   L   M    +  +  TYNT+I  +    +   A +L Q+M + G+ P+ +T +T
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHA 353
           ++      GKL  A  +F+ ++ S           GVE D   Y  +I      G    A
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           + L  E+      PNTI   + I  L +  R++EAT +F          D+  F  ++  
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG 584

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           + +  +  + +E+F +M   G   D+     +++ + K+     A D++ EM   G V+ 
Sbjct: 585 YCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG-VYP 643

Query: 470 DQVHFQ-MLSLYGARKDFNMLESLFERL 496
           D +  + ML++  ++++     ++ E L
Sbjct: 644 DTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 222/478 (46%), Gaps = 54/478 (11%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++  + +  +   AH L+ EM+++GI PD +TY+ +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + +++ ++V YS LI    K   + +A  ++  +   GI+
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN+MI+ F K      A  +   M  +G  PD  +++TL++ Y    +  +   +
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ NTLL  
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD---LSQQMISSGVCPDIVTCNTLLDG 468

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F+ MQ+ +           +E +V TYN +I      GK LE E+  
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE-- 526

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI PN ITYS++I    K  +LD A  +F  + S     D V + T++  Y
Sbjct: 527 -LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
                                           +AGR+++   +F +    G V D   + 
Sbjct: 586 -------------------------------CKAGRVDDGLELFCEMGRRGIVADAITYI 614

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +I  F +       +++F++M S+G +PD+  I  +L       E + A  +  ++Q
Sbjct: 615 TLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 255/539 (47%), Gaps = 22/539 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +N ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 71  SRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPF 130

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +     D+V +S L+         S+A+ +F ++      P++V + T++N
Sbjct: 131 ALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMN 186

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCP 191
              +     EA  L++ M E G++P+ ++Y T+++   +    V AL++  +M E+ +  
Sbjct: 187 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIK 246

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  L+  M++ GI P + +YN ++  +  +  + EA  L
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  NVVTY+ +I  Y K  +  +A  L  EM  RGI PN ITY+++I  + K
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   D   + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 367 QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + +Q   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V +   +  M
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           ++    +   +    +F+ + S S + +    + +V+G Y +A R++D   +   M +R
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG-YCKAGRVDDGLELFCEMGRR 604



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 179/401 (44%), Gaps = 9/401 (2%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    ++ ++ L+ +  ++      IS++ +++   I  D+ ++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  F        A     ++ + G +PD V++STLL+      +  EAL +F +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T   +++   +     +A  L   M + G+ P+ ++Y T++    +      A+
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 250 HLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +L R M+    I+ NVV Y+ +I    K   H  A NL  EMQ +GI P+  TY+ +I  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           +  +G+   A  L Q++    +  + V Y  +I AY +      A+ L  E+      PN
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           TI   + I    +  R++ A  +F      G   D+  F  +I+ +   K+  +  E+  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M   G   D+     +++ +  + +   A DL  +M   G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 170/400 (42%), Gaps = 34/400 (8%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  + ++ L+ + V   +    +S++ +M     P D
Sbjct: 52  FHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCD 111

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + NI+I  +        A   F  + K+G  P VV+++TLL      +   EA+ LF 
Sbjct: 112 VYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFH 171

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R     NVVT+ T++    +     +A  L+  M   G++PN ITY TI+    K G
Sbjct: 172 QMCRP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
               A  L +K+                        ++H K        PN +     I 
Sbjct: 228 DTVSALNLLRKMEE----------------------MSHIK--------PNVVIYSAIID 257

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + GR  +A  ++ +  + G   D+  + CMI+ F  + +++    + ++M      P
Sbjct: 258 GLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINP 317

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           +    + ++N+Y K R+F  A++LY EM   G + +   +  M+  +  +   +  E +F
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF 377

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + +          + +   Y  A R++D + +++ M +
Sbjct: 378 YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 231/460 (50%), Gaps = 10/460 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +PSVF YNV++  + +    E +  LF +MR+ G++PD  TY++LI  +GK G  + 
Sbjct: 283 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 342

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             S   +M+      D++ Y+ LI    K     +A   FS +K++G+ P++V Y+T+I+
Sbjct: 343 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 402

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  + + A  L  +MR  G+ P+  +Y++L++   +     EA  +  +M +    L
Sbjct: 403 AFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 462

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   ++D   +     +A+ +F SM K GI P+   Y  L+  Y +AE   +A+ + 
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M    I+ +++ Y ++I  +    + E+   +++EM++RGI  N +  +TII  + KA
Sbjct: 523 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 582

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPR 368
           GK   A   FQ+++  GVE   V Y  +I    + G+V  A     R+L    QPN    
Sbjct: 583 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVY 642

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE---VFEK 425
            + I  L +   IE A  +F +    G   DI+ F  +I+    N K+ N+ E   +  +
Sbjct: 643 TSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID---GNLKHGNLQEALVLISR 699

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           M       D H+   +++ + +  E   A   ++EM E+G
Sbjct: 700 MTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 248/526 (47%), Gaps = 8/526 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L  + ++   +L    F++M   GIAP  +TY+ +I    KEG  +++
Sbjct: 249 RTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENS 308

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                QM +  +S D+V Y++LI+   K+    +  S+F+ +K  G VPD++ YN +IN 
Sbjct: 309 RRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 368

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K +    A     EM+  G+KP+ V+YSTL++ + +      A+ +F +M       +
Sbjct: 369 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPN 428

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   +     +A +L   M + G+  ++V+Y  LL    +A    EA  +FR
Sbjct: 429 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 488

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +  I  N   Y  ++  Y K+   E A  ++++M    I+P+ I Y +I  IWG   
Sbjct: 489 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI--IWGHCS 546

Query: 314 --KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             KL+   ++ ++++S G+  +PV+  T+I AY + G  + A     E++    +   + 
Sbjct: 547 QRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 606

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L +AG +E A   F +    G   +++V+  +I+   +N    +  ++F++M+
Sbjct: 607 YCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ 666

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PD      +++   K    + A  L S M E    F   V+  ++S +    + +
Sbjct: 667 CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 726

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                F  +     + ++ L   +   Y +  +L++A  + N M +
Sbjct: 727 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 772



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 216/460 (46%), Gaps = 4/460 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP V  YN ++    +    E    LF+EM+  G  PD  TY+ LI C+ K     
Sbjct: 317 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 376

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A  +  +M+ + +  ++V YS LI+   K      AI +F  ++ +G++P+   Y ++I
Sbjct: 377 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   KA    EA  L+ +M + GVK + V+Y+ LL+   +  + +EA  VF  M +    
Sbjct: 437 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +      ++  Y + +  +DA ++   M +  I P ++ Y +++  +       E   +
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 556

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M+ + I  N V   T+I  Y K+ +   A N  QEMQ+ G+E   +TY  +I    K
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG ++ A   F ++ S G++ +  +Y ++I    +   +  AK+L  E++     P  TA
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            T L     + G ++EA  +  +  +     D+ V+  ++  FS+  +     + F +M 
Sbjct: 677 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 736

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             G  P+  +   +L  Y K  + + A +L +EM+  G +
Sbjct: 737 EKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLI 776



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 210/476 (44%), Gaps = 34/476 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT----- 56
           ++    W   +  +  +  +Y +++  V RA+ +  AH    E+         +      
Sbjct: 146 ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIF 205

Query: 57  ---YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFS 113
              +ST   C    G+FD                  VL+S  +EL        +A   FS
Sbjct: 206 DMLWSTRNICVSGSGVFD------------------VLFSVFVELGL----LEEANECFS 243

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           R+++   +P   + N +++   K+   +  R    +M   G+ P   +Y+ +++   +  
Sbjct: 244 RMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 303

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               +  +F +M E+    D+ T N +ID YG++   ++   LF  M+ +G  P +++YN
Sbjct: 304 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 363

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            L+  Y + E    A   F  M+   ++ NVVTY+T+I  + K    + A  L  +M+  
Sbjct: 364 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT 423

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G+ PN  TY+++I    KAG L  A  L   +  +GV+++ V Y  ++    + G +  A
Sbjct: 424 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 483

Query: 354 KRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           + +   + +    P +   T L     +A R+E+A  + +Q  +     D+ ++G +I  
Sbjct: 484 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 543

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               +K      + E+M+S G   +  I   ++++Y K  +   A + + EMQ+ G
Sbjct: 544 HCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599


>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
 gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
 gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
 gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
 gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
          Length = 862

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 266/539 (49%), Gaps = 8/539 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +  ++  +    P+   Y +++  + R    +    +FDEM  +G++   ++Y+ L
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G +++++  L +M+ +++S  ++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD+V YNT+++      L  EA ++   M + G+ PD  +YS L+  + +  +  +  
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       D+T+ N++++ Y +    K+A  +F  M+  G  P+  +Y+ LL ++
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G++  + +   LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+ 
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY  II   GK G  + A  + Q + ++ +      Y  +I A+ +  L   A    + 
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482

Query: 360 LRQPNTIPR-ETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +  + P  ET  ++L   AR G ++E+  +  +  D+G  ++   F   IE + +  K
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   ++ +  M  +   PD   +  VL+ Y   R  +   + + EM+    + S   +  
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602

Query: 476 MLSLYGARKDFNMLESLFERLDSD--SNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           ML++YG  + ++ +  L E + S+  SNI++  +  ++ G Y+  +       +++++N
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQV-IGQMIKGDYDDDSNWQIVEYVLDKLN 660



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 243/538 (45%), Gaps = 34/538 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +LD +  E + SPS+  YN V+    R    WE   GLF EMR  GI PD  TY+TL
Sbjct: 195 SLELLDRMKNE-KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 253

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ++     G+ D A    + M    +  DL  YS+L+E   KL    K   +   + S G 
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++  + K+   KEA  +  +M+  G  P+  +YS LLNL+ ++ ++ +   
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   D  T NI+I+V+G+    K+   LF  M +  I+P + +Y  ++   G
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L  +A  + + M   +I  +   Y  +I+ +G++  +E+A      M   G  P+  
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           T+ +++  + + G +  +  +  +L  SG+  +   +   I AY++ G    A +   ++
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +    P E          R  EA                     ++ ++S  +      
Sbjct: 554 EKSRCDPDE----------RTLEA---------------------VLSVYSFARLVDECR 582

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SL 479
           E FE+M+++   P      ++L  YGK   ++  ++L  EM         QV  QM+   
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGD 642

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           Y    ++ ++E + ++L+S+        ++ +        +   A+R++N   KR  F
Sbjct: 643 YDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 229/444 (51%), Gaps = 5/444 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  + +  +   A  L + M  +G  PD  TY  +I
Sbjct: 154 AVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A++ L +ME+ ++  D+V+YS +I+   K      A+++F+ + + GI 
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+  Y+++I+       + +A  L+ +M E+ + P+ V++++L++ + +  K +EA  +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F EM + +   ++ T N +I+ +   D   +A ++F  M      P VV+YNTL+  + +
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   + + LFR M R+ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+T++    K GKL++A ++F+ L+ S +E D   Y  M     + G V     L   L 
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ I   T I+   + G  EEA  +F +  + G + D   +  +I    R+   A
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572

Query: 418 NVIEVFEKMRSAGYFPDSHIIALV 441
              E+ ++MRS  +  D+    LV
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 238/485 (49%), Gaps = 9/485 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS+   N +L       +   A  L D+M + G  PD  T++TL+    +      A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + +++M       DLV Y  +I    K  +   A+++ ++++   I  D+V Y+T+I+  
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   +A  L  EM  +G++PD  +YS+L++      ++ +A  + ++M E     ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID + +     +A++LF  M +  IDP++V+YN+L+  +   +   EA  +F L
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K+   +VVTYNT+I  + K+ +      L ++M  RG+  N +TY+T+I  + +A  
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            D A M+F+++ S GV  + + Y T++    + G +  A  +   L++    P      I
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490

Query: 375 LA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           ++    +AG++E+   +F      G   D+  +  MI  F +         +F KM+  G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLS--LYGARKDFN 487
             PDS     ++ ++ +  +   + +L  EM+   C F+ D   + +++  L+  R D  
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS--CRFAGDASTYGLVTDMLHDGRLDKG 608

Query: 488 MLESL 492
            LE L
Sbjct: 609 FLEVL 613



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 215/478 (44%), Gaps = 39/478 (8%)

Query: 27  RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
           RN L   + + A  LF EM +    P    +S L++   K   FD  IS+ ++ME   VS
Sbjct: 38  RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
            +L  Y+ +I    + S  S A++I  ++   G  P +V  N+++N F       EA  L
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY-- 204
           +++M E G +PDTV+++TL++   +++K  EA+++   M    C  DL T   +I+    
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217

Query: 205 -GQLDMA--------------------------------KDADRLFWSMRKMGIDPSVVS 231
            G+ D+A                                 DA  LF  M   GI P V +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y++L+        + +A  L   M  ++I  NVVT+N++I  + K  +  +A  L  EM 
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            R I+PN +TY+++I  +    +LD A  +F  + S     D V Y T+I  + +   V 
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
               L  ++ +     NT+   T I    +A   + A  VF+Q    G   +I  +  ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +   +N K    + VFE ++ +   PD +   ++     K  + E   DL+  +  +G
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 184/435 (42%), Gaps = 39/435 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+    +M + R    +V +S L+    K+  +   IS   +++  G+  +L  YN 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MIN   +      A  ++ +M + G  P  V+ ++LLN +   ++  EA+++  +M E  
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-- 163

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                                            MG  P  V++ TL+    +     EA+
Sbjct: 164 ---------------------------------MGYQPDTVTFTTLVHGLFQHNKASEAV 190

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M  K  + ++VTY  +I    K  E + A NL+ +M+   IE + + YST+I   
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            K   +D A  LF ++ + G+  D   Y ++I      G  + A RLL ++ +    PN 
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   + I   A+ G++ EA  +F +        +I  +  +I  F  + +     ++F  
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M S    PD      ++N + K ++     +L+ +M   G V +   +  ++  +    D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 486 FNMLESLFERLDSDS 500
            +  + +F+++ SD 
Sbjct: 431 CDNAQMVFKQMVSDG 445



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ ++++  P ++ YN++   + +A + E    LF  +  +G+ PD   Y+T+
Sbjct: 468 KAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F K+G+ + A +   +M++D    D   Y+ LI    +  D + +  +   ++S   
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
             D   Y  + ++    +L K
Sbjct: 587 AGDASTYGLVTDMLHDGRLDK 607


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 208/445 (46%), Gaps = 31/445 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V++ N+++  + R    + A  ++ +M + GI PD  T++TLI     EG    A+   
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M +     D++ Y+ LI       + + A+ +F +++ +G  P++V YNT+I+   K 
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +L  +A   + EM  +G+ PD ++Y+++++      +  EA  +F  M +  C  D+ T 
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI+ID   +  +  DA      M   GI P VV+Y T+L          EAI LF+ M++
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K  + +VV YNT+I    K      A   + EM +RGI PNA+TYSTI+  +   G+LD 
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  LF+++    V                                PNT+     +  L +
Sbjct: 427 ATQLFKEMVGRNV-------------------------------MPNTLTFSILVDGLCQ 455

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G + EA WVF    + G   +I  +  ++  +    K     +VFE M   G  PD H 
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515

Query: 438 IALVLNSYGKLREFETADDLYSEMQ 462
             +++N Y   R  + A  L ++M 
Sbjct: 516 YNILINGYCNSRRMDKAKALLTQMS 540



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 224/462 (48%), Gaps = 6/462 (1%)

Query: 10  NEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           NE  R  + P V +YN ++  +  +    +A  +F +M Q G  P+  TY+T+I    K+
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
            + + A+ +L +M    +  D + Y++++     L   ++A  +F R++ +G  PD+V Y
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I+   K +L  +A   + EM +QG+ PD V+Y+T+L+      +  EA+ +F +M +
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C  D+   N +ID   +  +  DA      M   GI P+ V+Y+T+L  +       E
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF+ M  + +  N +T++ ++    +     +A  + + M  +G+EPN  TY+ ++ 
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
            +    K++ A  +F+ +   G   D   Y  +I  Y     +  AK LL ++      P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           NT+   T +  L   GR+ +A  +F++   +G +  +  +  ++    ++      +++F
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + M+     PD  +  +++       + E A  L+S++  +G
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 200/427 (46%), Gaps = 4/427 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V  YN ++ ++ + +    A     EM  RGI PD  TY++++      G  
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++MEQ+    D+V Y+ +I+   K    + A    S +   GI PD+V Y T+
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  L ++M ++G KPD V+Y+T+++   ++    +A+   +EM +   
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +  T + ++  +  L    +A +LF  M    + P+ ++++ L+    +  +  EA  
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M  K +E N+ TYN ++  Y    +  +A  + + M  +G  P+  +Y+ +I  + 
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYC 524

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            + ++D+A  L  ++    +  + V Y T++     VG +  A+ L  ++     +P   
Sbjct: 525 NSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLM 584

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I    L + G ++EA  +F+   +     DI ++  +IE      K      +F K+
Sbjct: 585 TYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKL 644

Query: 427 RSAGYFP 433
            + G  P
Sbjct: 645 SADGIQP 651



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 169/358 (47%), Gaps = 4/358 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A++ F R+      P +V +   +    K K +     L  +M   GV     S + L+N
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
                +    A+SV+ +M ++    D+ T   +I+        K A  L+  M + G +P
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEP 196

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
            V+SYNTL+     +     A+H+F+ M++   + NVVTYNT+I    K      A + +
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM  RGI P+AITY++I+      G+L+ A  LF+++  +G + D V Y  +I +  + 
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            LV  A   L E+      P+ +   T +  L   G++ EA  +F++    G   D+  +
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
             +I+   +++   + +E   +M   G  P++   + +L+ +  L + + A  L+ EM
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/494 (20%), Positives = 206/494 (41%), Gaps = 31/494 (6%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F  M +    P    +   +    K   + + +    QM+   V+  +   + LI    +
Sbjct: 81  FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+    A+S++ ++   GI PD++ + T+IN        K A  L  EM   G +PD +S
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+N    +     A+ VF +M +  C  ++ T N +ID   +  +  DA      M 
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P  ++YN+++          EA  LF+ M++   + +VVTYN +I    K     
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A + + EM ++GI P+ +TY+TI+      G+L+ A  LF+K+   G            
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC----------- 369

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
                               +P+ +   T I  L +   + +A     +  D G   +  
Sbjct: 370 --------------------KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV 409

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  ++  F    +     ++F++M      P++   +++++   +      A  ++  M
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
            E+G   +   +  +++ Y  R   N    +FE +           ++++   Y  + R+
Sbjct: 470 TEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529

Query: 522 NDASRIMNRMNKRR 535
           + A  ++ +M+ ++
Sbjct: 530 DKAKALLTQMSVKK 543



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 42/262 (16%)

Query: 8   WINE---EARYSPSVFAYNVVLRN-VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           W+ E   E    P+++ YN ++    LR K  E A  +F+ M  +G APD ++Y+ LI  
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNE-ARKVFEIMVGKGCAPDLHSYNILING 522

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           +      D A + L QM   +++ + V Y+ +++    +     A  +F ++ SSG++P 
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           L+ Y+ ++N   K     EA  L + M+E+ ++PD + Y+ L          +E +    
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL----------IEGMF--- 629

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
                              + G+L++AK    LF  +   GI P   +YN +++   +  
Sbjct: 630 -------------------IGGKLEVAKG---LFSKLSADGIQPPGRTYNVMIKGLLKEG 667

Query: 244 LFGEAIHLFRLMQRKEIEQNVV 265
           L  EA  LFR  + K ++ NV+
Sbjct: 668 LSDEAYELFR--KWKMMKHNVI 687



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/371 (20%), Positives = 149/371 (40%), Gaps = 43/371 (11%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA   F+ M +M   PS+V +   L    + + +   ++L   M    +   V + N +I
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               +    + A ++  +M   GI+P+ IT++T+I      GK+  A  L+ ++  SG E
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR---------- 377
            D + Y T+I      G    A  +  ++ Q    PN +   T I  L +          
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 378 -------------------------AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
                                     G++ EAT +F++    G   D+  +  +I+   +
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           ++   +  +   +M   G  PD      +L+    L +   A  L+ +M+++GC   D V
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK-PDVV 374

Query: 473 HFQML--SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            +  +  SL   R   + +E L E +D     N      ++ G +    +L++A+++   
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHG-FCNLGQLDEATQLFKE 433

Query: 531 MNKRRTFNSSL 541
           M  R    ++L
Sbjct: 434 MVGRNVMPNTL 444


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 210/422 (49%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +  ++  + +  ++  A  LFD+M  RG  PD YTY+T+I    K G   +A   
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     ++V YS +I+  RK    ++A+ IFS +K  GI PD+  YN++I     
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  L+ EMR   + PD V+++ L++   +  K  EA  V   M E+    D+ T
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++  Y       +A +LF +M   G  P V SYN L+  Y + +   EA  LF  M 
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  N V+YNT+I    +     +A NL + M   G  PN  TYS ++  + K G   
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+ ++S+  + + V+Y  +I A  + G +  A++L  EL     QPN     T I
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G ++EA   FR   + G   D   +  +I  F  +K  +  +++  +MR  G+ 
Sbjct: 526 NGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585

Query: 433 PD 434
            D
Sbjct: 586 AD 587



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 227/468 (48%), Gaps = 10/468 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P +  +  +L  +++  Q+ +    L  +M   G++P+ YT S LI CF      D A S
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L ++ +  +   +V ++ LI    K+  +++A+ +F  + + G  PD+  Y T+IN   
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A  L+++M E G +P+ V+YST+++ + ++ +  EAL +F+ M       D+ 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I         K+A  L   MR + I P +V++N L+    +     EA  + + M
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHE--KATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
               +E +VVTY+++  +YG SL  E  +A  L   M  +G +P+  +Y+ +I  + K  
Sbjct: 335 TEMGVEPDVVTYSSL--MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++D A  LF ++   G+  + V Y T+I    ++G +  A+ L   +     +P     +
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           IL     + G   +A  +FR         ++ ++  +I+   ++    +  ++F ++   
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G  P++ I   ++N   K    + A + +  M+E+GC   D++ + ++
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP-PDEISYNVI 559



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 221/459 (48%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP+++  ++++      ++ +LA  +  ++ + G+ P   T++TLI    K G F
Sbjct: 125 ELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF 184

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+     M       D+  Y+ +I    K+ + + A  +  +++ +G  P++V Y+T+
Sbjct: 185 AQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTI 244

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K +   EA  +   M+ +G+ PD  +Y++L+       ++ EA ++  EM  +N 
Sbjct: 245 IDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNI 304

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T N+++D   +     +A  +  +M +MG++P VV+Y++L+  Y       EA  
Sbjct: 305 MPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARK 364

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M  K  + +V +YN +I  Y K    ++A  L  EM ++G+ PN ++Y+T+I    
Sbjct: 365 LFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC 424

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           + G L  A  LF+ + ++G   +   Y  ++  + + G    A RL   ++    +PN +
Sbjct: 425 QLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLV 484

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  + ++G + +A  +F + F  G   +  ++  +I    +       +E F  M
Sbjct: 485 MYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNM 544

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              G  PD     +++  +   ++   A  L  EM+++G
Sbjct: 545 EEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 213/442 (48%), Gaps = 5/442 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMF-DSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           F+ M  R   P    ++ L++   K G + D+ IS  +QME   +S ++   S LI    
Sbjct: 85  FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            L     A S+ +++   G+ P +V + T+IN   K   F +A  L ++M  +G +PD  
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T++N   +  +   A  +  +M E  C  ++ T + +ID + +     +A  +F  M
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  GI P + +YN+L++       + EA  L   M+   I  ++VT+N ++    K  + 
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  +++ M   G+EP+ +TYS+++  +    ++  A  LF  + + G + D   Y  +
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +V  +  AK+L    +H+   PN +   T I  L + G + EA  +F+     G 
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + ++  +  +++ F +   +     +F  M+S    P+  +  +++++  K      A  
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504

Query: 457 LYSEMQEEGCVFSDQVHFQMLS 478
           L+SE+  +G   + Q++  +++
Sbjct: 505 LFSELFVKGLQPNAQIYTTIIN 526



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 175/356 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EEA   P+V  Y+ ++ +  + ++   A  +F  M+ +GI+PD +TY++LI        +
Sbjct: 230 EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQW 289

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A + L +M    +  D+V ++ L++   K    S+A  +   +   G+ PD+V Y+++
Sbjct: 290 KEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSL 349

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  +       EAR L + M  +G KPD  SY+ L+N Y +  +  EA  +F EM     
Sbjct: 350 MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  + N +I    QL   ++A  LF +M   G  P++ +Y+ LL  + +   FG+A  
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LFR MQ    + N+V YN +I    KS     A  L  E+  +G++PNA  Y+TII    
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           K G LD A   F+ +   G   D + Y  +I  +      + A +L+ E+R    I
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 249/508 (49%), Gaps = 20/508 (3%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD  ++  R  P V  +  ++  + R  +   A  L D M + G+ PD+ TY T +    
Sbjct: 171 LDLFHQICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 66  KEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           K G   SA++ L++ME+   +  ++V+YS +I+   K   +S + ++F  ++  GI P++
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN MI  F  +  +  A+ L++EM E+ + P+ V+Y+ L+N +V+  KF EA  ++ E
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       +  T N MID + + D    A+ +F+ M   G  P V ++ TL+  Y  A+ 
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             + + L   M R+ +  N VTYNT+I  +    +   A +L Q+M + G+ P+ +T +T
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHA 353
           ++      GKL  A  +F+ ++ S           GVE D + Y  +I      G    A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           + L  E+      P+TI   + I  L +  R++EAT +F          ++  F  +I  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           + +  +  + +E+F +M   G   D+ I   ++  + K+     A D++ EM   G V+ 
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG-VYP 647

Query: 470 DQVHFQ-MLSLYGARKDFNMLESLFERL 496
           D +  + ML+ + ++++     ++ E L
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 258/550 (46%), Gaps = 28/550 (5%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +N ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 75  SRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 134

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+ +F ++      PD++ + T++N
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMN 190

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCP 191
              +     EA  L++ M E G++PD ++Y T ++   +    V AL++  +M E+ +  
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     D+  LF  M+  GI P++V+YN ++  +  +  +  A  L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  NVVTYN +I  + K  +  +A  L  EM  RGI PN ITY+++I  + K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F  + + G   D   + T+I  Y     +     LLHE+ +     NT+ 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I      G +  A  + +Q   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 428 SA-----------GYFPDS---HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +           G  PD    +I+   L + GK  E   A++LY EM   G V     +
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE---AEELYEEMPHRGIVPDTITY 547

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             M+     +   +    +F  + S S + N    + ++ G Y +A R++D   +   M 
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING-YCKAGRVDDGLELFCEMG 606

Query: 533 KRRTFNSSLV 542
           +R     +++
Sbjct: 607 RRGIVADAII 616



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 222/478 (46%), Gaps = 54/478 (11%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++  + +  +   +H LF EM+ +GI P+  TY+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G + +A   LQ+M + ++S ++V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN+MI+ F K      A  +   M  +G  PD  +++TL++ Y    +  + + +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM       +  T N +I  +   G L+ A D   L   M   G+ P +V+ NTLL  
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD---LSQQMISSGVCPDIVTCNTLLDG 472

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F+ MQ+ +           +E +V+TYN +I      GK LE E+  
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-- 530

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 531 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            + G                               R+++   +F +    G V D  ++ 
Sbjct: 590 CKAG-------------------------------RVDDGLELFCEMGRRGIVADAIIYI 618

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +I  F +       +++F++M S+G +PD+  I  +L  +    E E A  +  ++Q
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 180/401 (44%), Gaps = 9/401 (2%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    ++ ++ L+    ++      IS++ +++   I  D+ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  F        A     ++ + G+ PD V+++TLL+    +H+  EAL +F ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ T   +++   +     +A  L   M + G+ P  ++Y T +    +      A+
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 250 HLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +L R M+    I+ NVV Y+ +I    K   H  + NL  EMQ++GI PN +TY+ +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           +  +G+   A  L Q++    +  + V Y  +I A+ + G    A  L  E+      PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           TI   + I    +  R++ A  +F      G   D+  F  +I+ +   K+  + +E+  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M   G   ++     +++ +  + +   A DL  +M   G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 176/435 (40%), Gaps = 38/435 (8%)

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K  ++A  L  +M      P  + ++ L+   V   +    +S++ +M       D+ + 
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-------RVYGEAELFG---- 246
            I+I  +        A   F  + K+G+ P VV++ TLL       RV    +LF     
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 247 --------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                               EA+ L   M    ++ + +TY T +    K  +   A NL
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 287 MQEMQN-RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           +++M+    I+PN + YS II    K G+   +  LF +++  G+  + V Y  MI  + 
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             G  + A+RLL E+ +    PN +     I    + G+  EA  ++ +    G + +  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  MI+ F +  +     ++F  M + G  PD      +++ Y   +  +   +L  EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANR 520
              G V +   +  ++  +    D N    L +++ S     +    + ++ G+ +   +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG-K 478

Query: 521 LNDASRIMNRMNKRR 535
           L DA  +   M K +
Sbjct: 479 LKDALEMFKAMQKSK 493


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 249/508 (49%), Gaps = 20/508 (3%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD  ++  R  P V  +  ++  + R  +   A  L D M + G+ PD+ TY T +    
Sbjct: 171 LDLFHQICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 66  KEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           K G   SA++ L++ME+   +  ++V+YS +I+   K   +S + ++F  ++  GI P++
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN MI  F  +  +  A+ L++EM E+ + P+ V+Y+ L+N +V+  KF EA  ++ E
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDE 348

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       +  T N MID + + D    A+ +F+ M   G  P V ++ TL+  Y  A+ 
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             + + L   M R+ +  N VTYNT+I  +    +   A +L Q+M + G+ P+ +T +T
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHA 353
           ++      GKL  A  +F+ ++ S           GVE D + Y  +I      G    A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           + L  E+      P+TI   + I  L +  R++EAT +F          ++  F  +I  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           + +  +  + +E+F +M   G   D+ I   ++  + K+     A D++ EM   G V+ 
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG-VYP 647

Query: 470 DQVHFQ-MLSLYGARKDFNMLESLFERL 496
           D +  + ML+ + ++++     ++ E L
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 258/550 (46%), Gaps = 28/550 (5%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +N ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 75  SRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 134

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+ +F ++      PD++ + T++N
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMN 190

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCP 191
              +     EA  L++ M E G++PD ++Y T ++   +    V AL++  +M E+ +  
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     D+  LF  M+  GI P++V+YN ++  +  +  +  A  L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  NVVTYN +I  + K  +  +A  L  EM  RGI PN ITY+++I  + K
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F  + + G   D   + T+I  Y     +     LLHE+ +     NT+ 
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I      G +  A  + +Q   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 428 SA-----------GYFPDS---HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +           G  PD    +I+   L + GK  E   A++LY EM   G V     +
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE---AEELYEEMPHRGIVPDTITY 547

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             M+     +   +    +F  + S S + N    + ++ G Y +A R++D   +   M 
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING-YCKAGRVDDGLELFCEMG 606

Query: 533 KRRTFNSSLV 542
           +R     +++
Sbjct: 607 RRGIVADAII 616



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 222/478 (46%), Gaps = 54/478 (11%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++  + +  +   +H LF EM+ +GI P+  TY+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G + +A   LQ+M + ++S ++V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN+MI+ F K      A  +   M  +G  PD  +++TL++ Y    +  + + +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM       +  T N +I  +   G L+ A D   L   M   G+ P +V+ NTLL  
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD---LSQQMISSGVCPDIVTCNTLLDG 472

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F+ MQ+ +           +E +V+TYN +I      GK LE E+  
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE-- 530

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 531 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            + G                               R+++   +F +    G V D  ++ 
Sbjct: 590 CKAG-------------------------------RVDDGLELFCEMGRRGIVADAIIYI 618

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +I  F +       +++F++M S+G +PD+  I  +L  +    E E A  +  ++Q
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 180/401 (44%), Gaps = 9/401 (2%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    ++ ++ L+    ++      IS++ +++   I  D+ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  F        A     ++ + G+ PD V+++TLL+    +H+  EAL +F ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ T   +++   +     +A  L   M + G+ P  ++Y T +    +      A+
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 250 HLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +L R M+    I+ NVV Y+ +I    K   H  + NL  EMQ++GI PN +TY+ +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           +  +G+   A  L Q++    +  + V Y  +I A+ + G    A  L  E+      PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           TI   + I    +  R++ A  +F      G   D+  F  +I+ +   K+  + +E+  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M   G   ++     +++ +  + +   A DL  +M   G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 176/435 (40%), Gaps = 38/435 (8%)

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K  ++A  L  +M      P  + ++ L+   V   +    +S++ +M       D+ + 
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-------RVYGEAELFG---- 246
            I+I  +        A   F  + K+G+ P VV++ TLL       RV    +LF     
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 247 --------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                               EA+ L   M    ++ + +TY T +    K  +   A NL
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 287 MQEMQN-RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           +++M+    I+PN + YS II    K G+   +  LF +++  G+  + V Y  MI  + 
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             G  + A+RLL E+ +    PN +     I    + G+  EA  ++ +    G + +  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  MI+ F +  +     ++F  M + G  PD      +++ Y   +  +   +L  EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANR 520
              G V +   +  ++  +    D N    L +++ S     +    + ++ G+ +   +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG-K 478

Query: 521 LNDASRIMNRMNKRR 535
           L DA  +   M K +
Sbjct: 479 LKDALEMFKAMQKSK 493


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 232/490 (47%), Gaps = 41/490 (8%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDSAISW 76
            +V  +NVV++ +  A++ + A  LF EM + G   PD +TYST++    K G  D A   
Sbjct: 911  NVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL 970

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ M     S ++V YS+L+    K     +A ++  R+  SG  P++V YNT+I+   K
Sbjct: 971  VEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 1030

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 EA  L+EEM + G +P+ V+Y+ LL+ + +  K  +A+ +   M E     +L T
Sbjct: 1031 LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI------- 249
             N ++D++ + D  + A +L  SM + G  P+VVSYNT++    +A    E +       
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150

Query: 250  ----------------------------HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                                         LF L+Q      N+VTYN+++    KS   +
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210

Query: 282  KATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  L++EM + +G  P+ ITY+T+I    K+ ++DRA  LF ++ S G+  D V Y  +
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270

Query: 341  IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
            I +  +   +  A  +L  + +    P  I   T I    + G +++A  + +     G 
Sbjct: 1271 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              D+  F   I+  S+  +     E+ E M  AG  PD+     +L  +      E A D
Sbjct: 1331 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD 1390

Query: 457  LYSEMQEEGC 466
            L+  M++ GC
Sbjct: 1391 LFEVMRQCGC 1400



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 251/547 (45%), Gaps = 9/547 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++   +W      Y   +F  N +L  +++A Q+  AH LF    +     D  TYSTLI
Sbjct: 109 ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLI 168

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           + F + G    A     +M +  +     ++ +++         S A+  F R  S    
Sbjct: 169 SGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF-REMSKTCP 227

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD V YNTMIN   K+    +A  L+EEM + G  P+  SY+T+L+ + + ++   AL +
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             +M    CP D+ +   +I+   +LD   +A R+   M + G  P+V++Y TL+  +  
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                 A+ L R M  +    N +TYN ++ ++ +  + E+A  ++Q M   G  P+AI 
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YSTII+ + KAGKL  A  L +++   G   D     T+I A  +   +  A+ LL    
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 362 QPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
             +  P   A +I    L +A R+ EA              D+  +  +++   ++++  
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   +F++MR+AG  PD    ++V++S+ K    ++A  +   M+E  CV  D V +  L
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV-PDVVTYSAL 586

Query: 478 --SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
              L  A       +   E L      N    + ++ G+  + N++  A+ ++  M K+ 
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC-KINKVEQAAEMLEIMRKQS 645

Query: 536 TFNSSLV 542
               S+ 
Sbjct: 646 CTPDSIT 652



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 224/453 (49%), Gaps = 8/453 (1%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            SP+V  Y+ +L  + +A + + A  L   M + G +P+  TY+T+I    K G  D A  
Sbjct: 980  SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 1039

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             L++M       ++V Y+ L++   K      AI +   +   G VP+L  YN+++++F 
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K    + A  L+  M ++G  P+ VSY+T++    +  K  E + +  +M   NC  D+ 
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T N +ID   +      A  LF  +++ G  P++V+YN+L+    ++  F +A +L R M
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219

Query: 256  QRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
             RK+    +++TYNT+I    KS   ++A  L  +M + G+ P+ +TYS +I+   K   
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            +D A  + + +  +G +   + Y T+I  + + G +  A  +L  L    + P     +I
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 375  ----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                L++ GR+ +A  +      AG V D   +  +++ F       + +++FE MR  G
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
              PD+     ++   G L + ++  DL +E+ +
Sbjct: 1400 CEPDNATYTTLV---GHLVDKKSYKDLLAEVSK 1429



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/518 (22%), Positives = 239/518 (46%), Gaps = 8/518 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S A+L +        P    YN ++  + ++ + + A  L +EM   G AP+ ++Y+T++
Sbjct: 213 SDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 272

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F K    ++A+  L+QM       D+V Y+ +I    KL    +A  +  ++   G  
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y T+++ F +      A  L+ +M E+G +P+ ++Y+ +++++   +    A  V
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M +  CP D    + +I  + +    ++A  L   M + G  P V   +TL+    +
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A  L R+    +   +VV Y+ +I    K+    +A + +  M      P+ +T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y++++    K+ +++ A +LF ++R++GV  D V Y  +I ++ +   +  A ++L  ++
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    P+ +     I  L +AG +++A  VF++    G   ++  +  +I+   +  K  
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              E+ E MR     PDS     ++N        E A  +  EM+++GC+     +  +L
Sbjct: 633 QAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLL 692

Query: 478 SLYGARKDFNMLESLFERLDSDS----NINKKELHHVV 511
                  +  ++E L + +++      N N   LH  V
Sbjct: 693 RALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFV 730



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 185/425 (43%), Gaps = 60/425 (14%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P +  +N ++  + +  + ++A+ LF+ +++ G  P+  TY++L+    K   FD A   
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215

Query: 77   LQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M + +  S D++ Y+ +I+   K     +A  +F ++ S G+ PD V Y+ +I+   
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K +   EA  ++E M + G  P  ++Y TL++ + +     +AL +   +       D+ 
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T +I ID   +    + A  L  +M + G+ P  V+YNTLL+ + +A L  +A+ LF +M
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395

Query: 256  QRKEIEQNVVTYNTMI------KIY--------------GKSLEHEKATNLMQEMQNRGI 295
            ++   E +  TY T++      K Y              G  L HE ++ L   ++   +
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIE---V 1452

Query: 296  EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS---------------------------- 327
            E +      I+ ++GK G    A  +F+ +                              
Sbjct: 1453 EADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRV 1512

Query: 328  ---SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTIPRETAITILARAG 379
                GVE D V + +++      GL+  A      +      +P        I +L R G
Sbjct: 1513 MGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLG 1572

Query: 380  RIEEA 384
             + EA
Sbjct: 1573 LVNEA 1577



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 7/280 (2%)

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            D  TCN ++    +L   KDA +++ +  K+   P++ ++  L+     A   G A  L 
Sbjct: 843  DTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAYELL 900

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAITYSTIIAIWGK 311
            + M R  + QNV+ +N +IK    + + + A  L +EM+  G   P+  TYSTI+    K
Sbjct: 901  KEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVK 960

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            +GK+D A  L + + S G   + V Y +++    + G +  A  LL  + +    PN + 
Sbjct: 961  SGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 1020

Query: 368  RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              T I    + GRI+EA  +  +  D G   ++  +  +++ F +  K  + I + E M 
Sbjct: 1021 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080

Query: 428  SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
              GY P+      +L+ + K  E E A  L S M ++GCV
Sbjct: 1081 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/413 (22%), Positives = 153/413 (37%), Gaps = 128/413 (30%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS----------------- 58
            SP +  YN V+  + ++K+ + A+ LF +M   G+APD  TYS                 
Sbjct: 1226 SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 1285

Query: 59   ------------------TLITCFGKEGMFDSA----------------------ISWLQ 78
                              TLI  F K G  D A                      I WL 
Sbjct: 1286 VLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLS 1345

Query: 79   QMEQDRVSGDL-------------VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
            +  + R +G+L             V Y+ L++     S    A+ +F  ++  G  PD  
Sbjct: 1346 KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNA 1405

Query: 126  AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
             Y T++      K +K+  LL E           VS S +   +  NH+    L    E+
Sbjct: 1406 TYTTLVGHLVDKKSYKD--LLAE-----------VSKSMVDTGFKLNHELSSKLEASIEV 1452

Query: 186  NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                   D+     ++D++G+    +DA ++F  M                         
Sbjct: 1453 EA-----DVRLGCAIVDMFGKCGSPQDARKVFEGMD------------------------ 1483

Query: 246  GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
                           ++NVV ++ M+ +Y    + E+A  L + M   G+EP+A+T+ ++
Sbjct: 1484 ---------------QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSL 1528

Query: 306  IAIWGKAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
            + +   AG LD A   F  + R  G+E     +  +I    R+GLV  A+ L+
Sbjct: 1529 LTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 238/482 (49%), Gaps = 10/482 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +PSVF YNV++  + +    E +  LF +MR+ G++PD  TY++LI  +GK G  + 
Sbjct: 224 AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 283

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             S   +M+      D++ Y+ LI    K     +A   FS +K++G+ P++V Y+T+I+
Sbjct: 284 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  + + A  L+ +MR  G+ P+  +Y++L++   +     EA  +  +M +    L
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   ++D   +     +A+ +F SM K GI P+   Y  L+  Y +AE   +A+ + 
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M    I+ +++ Y ++I  +    + E+   +++EM++RGI  N +  +TII  + KA
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPR 368
           GK   A   FQ+++  GVE   V Y  +I      G+V  A     R+L    QPN    
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE---VFEK 425
            + I  L     IE A  +F +    G   DI+ F  +I+    N K+ N+ E   +  +
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID---GNLKHGNLQEALVLISR 640

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M       D H+   +++ + +  E   A   ++EM E+G +  + +   +L  Y  R  
Sbjct: 641 MTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQ 700

Query: 486 FN 487
            +
Sbjct: 701 LD 702



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 245/526 (46%), Gaps = 8/526 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L  + ++   +L    F++M   GIAP  +TY+ +I    KEG  +++
Sbjct: 190 RTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENS 249

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                QM +  +S D+V Y++LI+   K+    +  S+F+ +K  G VPD++ YN +IN 
Sbjct: 250 RRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 309

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K +    A     EM+  G+KP+ V+YSTL++ + +      A+ +  +M       +
Sbjct: 310 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   +     +A +L   M + G+  ++V+Y  LL    +A    EA  +FR
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +  I  N   Y  ++  Y K+   E A  ++++M    I+P+ I Y +I  IWG   
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI--IWGHCS 487

Query: 314 --KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             KL+   ++ ++++S G+  +PV+  T+I AY + G  + A     E++    +   + 
Sbjct: 488 QRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 547

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L  AG +E A   F +    G   +++V+  +I+    N    +  ++F++M+
Sbjct: 548 YCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ 607

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PD      +++   K    + A  L S M E    F   V+  ++S +    + +
Sbjct: 608 CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 667

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                F  +     + ++ L   +   Y +  +L++A  + N M +
Sbjct: 668 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 212/455 (46%), Gaps = 4/455 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP V  YN ++    +    E    LF+EM+  G  PD  TY+ LI C+ K     
Sbjct: 258 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 317

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A  +  +M+ + +  ++V YS LI+   K      AI +   ++ +G++P+   Y ++I
Sbjct: 318 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   KA    EA  L+ +M + GVK + V+Y+ LL+   +  + +EA  VF  M +    
Sbjct: 378 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 437

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +      ++  Y + +  +DA ++   M +  I P ++ Y +++  +       E   +
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M+ + I  N V   T+I  Y K+ +   A N  QEMQ+ G+E   +TY  +I    +
Sbjct: 498 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE 557

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG ++ A   F ++ S G++ +  +Y ++I        +  AK+L  E++     P  TA
Sbjct: 558 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITA 617

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            T L     + G ++EA  +  +  +     D+ V+  ++  FS+  +     + F +M 
Sbjct: 618 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 677

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             G  P+  +   +L  Y K  + + A +L +EM+
Sbjct: 678 EKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 712



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 211/476 (44%), Gaps = 34/476 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT----- 56
           ++    W   +  +  +  +Y +++  V RA+ +  AH    E+         +      
Sbjct: 87  ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIF 146

Query: 57  ---YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFS 113
              +ST   C    G+FD                  VL+S  +EL        +A   FS
Sbjct: 147 DMLWSTRNICVSGSGVFD------------------VLFSVFVELGL----LEEANECFS 184

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           R+++   +P   + N +++   K+   +  R    +M   G+ P   +Y+ +++   +  
Sbjct: 185 RMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 244

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               +  +F +M E+    D+ T N +ID YG++   ++   LF  M+ +G  P +++YN
Sbjct: 245 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 304

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            L+  Y + E    A   F  M+   ++ NVVTY+T+I  + K    + A  L+ +M+  
Sbjct: 305 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G+ PN  TY+++I    KAG L  A  L   +  +GV+++ V Y  ++    + G +  A
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 424

Query: 354 KRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           + +   + +    P +   T L     +A R+E+A  + +Q  +     D+ ++G +I  
Sbjct: 425 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 484

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               +K      + E+M+S G   +  I   ++++Y K  +   A + + EMQ+ G
Sbjct: 485 HCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 115/246 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P +  Y  ++      ++ E    + +EM+ RGI+ +    +T+I  + K G   
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+++ Q+M+   V   +V Y  LI+   +      A+  F R+ S G+ P++  Y ++I
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        + A+ L +EM+ +G+ PD  +++ L++  +++    EAL + + M E+   
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            DL     ++  + Q      A + F  M + GI P  V    LLR Y +     EAI L
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707

Query: 252 FRLMQR 257
              M+R
Sbjct: 708 KNEMER 713


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 233/474 (49%), Gaps = 5/474 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  YN  + +  +A QWE+A  L  EM   G+APD  +YS+ I+  G+ G ++ A+ 
Sbjct: 135 TPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALE 194

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M    V+ D++ Y + I        + +A+S+  ++ + G+ P++++Y+++I    
Sbjct: 195 LFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACA 254

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +K A  L+ EM+   + P+ ++Y+  ++   +  ++ EA+ +  EM  V  P D+ 
Sbjct: 255 KEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVV 314

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + + +ID   + D  K+A  +   M  +G+ P+ +SYN+ +    +   + EA  L R M
Sbjct: 315 SYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREM 374

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               + Q V+ YN+ I    K  + ++A  L++EM   G+     +YS+ I   GK    
Sbjct: 375 PTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLW 434

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            +A  L +++ + G+  + V Y + I A  R      A  LL E+      P+     +A
Sbjct: 435 IKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSA 494

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I   A+  + +EA  V ++   AG   D+  +   I+  S+  ++   + +  +MR+AG 
Sbjct: 495 IAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGL 554

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
            P+    +  +++  +  +++    L  EM+  G V  D + +  L +  A+ D
Sbjct: 555 TPNIISYSSAIDACVRGGQWKEGIALLEEMRGSG-VVPDVITYHALMVTCAKYD 607



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 216/454 (47%), Gaps = 4/454 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P   +Y   +    R  +W++A  L  EM  R + P+   Y++ I    K G ++ A+S
Sbjct: 100 APDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVS 159

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M    ++ D++ YS+ I    +   + +A+ +F  +++SG+ PD++ Y + I    
Sbjct: 160 LVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACA 219

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +KEA  L+ ++   G+ P+ +SYS+++    +  ++  AL +  EM  +    ++ 
Sbjct: 220 NGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNII 279

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N  ID   +    K+A  L   M  +G+ P VVSY++++    + + + EAI + R M
Sbjct: 280 TYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREM 339

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N ++YN+ I    K  + ++A  L++EM   G+    I Y++ IA   K  + 
Sbjct: 340 PTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQW 399

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  L +++ + G+      Y + I A  +  L   AK LL E+      PN +   +A
Sbjct: 400 KEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSA 459

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R  + EEA  + R+    G   D+  +   I   ++  ++   + V ++M +AG 
Sbjct: 460 IDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGL 519

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD       +++  K   ++ A  L  EM+  G
Sbjct: 520 APDLICYNSAIDACSKGGRWKMAVALLGEMRAAG 553



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 206/449 (45%), Gaps = 4/449 (0%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +Y + +    R  QWE A  L  EM   G APD   YS +I    K G +  A+ +L +M
Sbjct: 35  SYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEM 94

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               ++ D   Y   I    +   +  A+ +   + +  + P+++ YN+ IN   KA  +
Sbjct: 95  PTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQW 154

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           + A  L++EM   G+ PD +SYS+ ++      ++ EAL +F +M       D+ T    
Sbjct: 155 EIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSA 214

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I         K+A  L   +  +G+ P+V+SY++++    +   +  A+ L R M+   +
Sbjct: 215 IAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRL 274

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             N++TYN  I    K    ++A +L++EM   G+ P+ ++YS++I    K  +   A  
Sbjct: 275 APNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAID 334

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILA 376
           + +++ + G+  + + Y + I A  + G    AK LL E+       R     +AI   A
Sbjct: 335 ILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACA 394

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +  + +EA  + R+    G    +  +   I+   +   +    E+  +M + G  P+  
Sbjct: 395 KGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEV 454

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
                +++ G+  ++E A DL  EM   G
Sbjct: 455 CYNSAIDACGRGDQWEEAVDLLREMPTVG 483



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P +  YN  +    +  +W++A  L  EMR  G+ P+  +YS+ I    + G +  
Sbjct: 517 AGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKE 576

Query: 73  AISWLQQMEQDRVSGDLVLYSNLI 96
            I+ L++M    V  D++ Y  L+
Sbjct: 577 GIALLEEMRGSGVVPDVITYHALM 600


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 229/446 (51%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D +     Y P+   +N ++  +    +   A  L D M  +G  PD  TY  ++
Sbjct: 170 AVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVV 228

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A   L +MEQ ++   +++Y+ +I+   K      A+++F  +++ GI 
Sbjct: 229 NGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + PD  ++S L++ +V+  K VEA  +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +    + T + +I+ +   D   +A ++F  M      P VVSY+TL++ + +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + LFR M ++ +  N VTY T+I+   ++ + + A  + +EM + G+ PN +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+T++    K GKL++A ++F+ L+ S +E     Y  MI    + G V     L   L 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ +   T I+   R G  EEA  +F++  + G + +   +  +I    R+    
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+ ++MRS G+  D+  I LV N
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 241/520 (46%), Gaps = 11/520 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ +L  + +  ++++   L ++M+  G+  + YTYS LI CF +     
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLP 133

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     ++V  S+L+         S+A+++  ++  +G  P+ V +NT+I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  LI+ M  +G +PD V+Y  ++N   +      A  +  +M +    
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +     +ID   +     DA  LF  M   GI P+VV+Y++L+        + +A  L
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  +V T++ +I  + K  +  +A  L  EM  R I+P+ +TYS++I  +  
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F+ + S     D V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +AG  + A  +F++    G   +I  +  +++   +N K    + VFE ++
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDF 486
            +   P  +   +++    K  + E   DL+  +  +G V  D V +  M+S +  +   
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSK 552

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
              ++LF+ +  D  +     ++ +     RA RL D  R
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLI----RA-RLRDGDR 587



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P VF ++ ++   ++  +   A  L+DEM +R I P   TYS+LI  F      D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M       D+V YS LI+   K     + + +F  +   G+V + V Y T+I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A     A+ + +EM   GV P+ ++Y+TLL+   +N K  +A+ VF  +      
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             + T NIMI+   +    +D   LF ++   G+ P VV+YNT++  +       EA  L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+      N   YNT+I+   +  + E +  L++EM++ G   +A T   +  +   
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-H 617

Query: 312 AGKLDRA 318
            G+LD++
Sbjct: 618 DGRLDKS 624



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ + ++  P+++ YN+++  + +A + E    LF  +  +G+ PD   Y+T+
Sbjct: 484 KAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G  + A +  ++M++D    +   Y+ LI    +  D   +  +   ++S G 
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
             D      + N+    +L K
Sbjct: 603 AGDASTIGLVTNMLHDGRLDK 623


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/525 (23%), Positives = 250/525 (47%), Gaps = 13/525 (2%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P++  YNVVL    R  + W     L DEMR  G+ PD +T ST+I    ++G+ D A+
Sbjct: 205 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAV 264

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           ++ + ++    +  +V Y+ L+++  K  +Y++A+ +   ++  G  PD V YN +   +
Sbjct: 265 AFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTY 324

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A  ++EA   ++ M  +G+ P+  +Y+T++  Y    K  EAL++F +M +  C  ++
Sbjct: 325 ARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNV 384

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++ + G+         +   M + G  P+ V++NT+L V G+  +      +   
Sbjct: 385 NTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEG 444

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +E +  TYNT+I  YG+      A  +  EM + G  P   TY+ ++ +  + G 
Sbjct: 445 MKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGD 504

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  +  K+R+ G + +   Y  ++  Y + G +A    +  E+      P    +  
Sbjct: 505 WSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRT 564

Query: 375 LA-------RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           L        R G IE+A   F++    G   D+ +F  M+ ++++N  Y+ V E+F+ ++
Sbjct: 565 LVIANFKCRRLGGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIK 621

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDF 486
            +G  PD      +++ Y K  E   A+ + ++++    V  D V +  +++ +  +   
Sbjct: 622 QSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ-VKPDVVSYNTVINGFCKQGLI 680

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              + +   + +D        +H + G Y      ++A  ++N M
Sbjct: 681 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM 725



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/549 (22%), Positives = 243/549 (44%), Gaps = 44/549 (8%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L+ +  +  WE A  L       G A D      ++   G+EG  D+  + L +M    
Sbjct: 109 LLKALELSGHWEWALALLRWAGAEGAA-DASALEMVVRALGREGQHDAVCALLDEMPLPP 167

Query: 85  VSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKE 142
            S  D+  Y+ ++    +   Y +A+ +F+ L+  G+ P LV YN +++V+G+  + +  
Sbjct: 168 GSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR 227

Query: 143 ARLLIEEMREQGVKPD-----------------------------------TVSYSTLLN 167
              L++EMR  GV+PD                                    V+Y+ LL 
Sbjct: 228 IVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQ 287

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           ++ +   + EAL V  EM +  C  D  T N +   Y +    ++A +   +M   G+ P
Sbjct: 288 VFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLP 347

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +  +YNT++  YG      EA+ LF  M++     NV TYN ++ + GK         ++
Sbjct: 348 NAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEML 407

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM   G  PN +T++T++A+ GK G  D    + + ++S GVE+    Y T+I AY R 
Sbjct: 408 GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRC 467

Query: 348 GLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G   +A ++ +E+      P  T     + +L+R G    A  +  +    G   +   +
Sbjct: 468 GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSY 527

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ +++    A +  + +++     FP   I+  ++ +  K R     +  + E++ 
Sbjct: 528 SLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKA 587

Query: 464 EGCVFSDQVHF-QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
            G    D V F  MLS+Y     ++ +  +F+ +           ++ +  +Y + +   
Sbjct: 588 RG-YNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESW 646

Query: 523 DASRIMNRM 531
           +A +I+N++
Sbjct: 647 EAEKILNQL 655



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/549 (22%), Positives = 230/549 (41%), Gaps = 81/549 (14%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R VA+LD +   A   P  F  + V+    R    + A   F++++ RG  P   TY+ L
Sbjct: 227 RIVALLDEM-RAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNAL 285

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK G +  A+  L++MEQD    D V Y+ L     +   Y +A      + S G+
Sbjct: 286 LQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGL 345

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P+   YNT++  +G      EA  L ++M++ G  P+  +Y+ +L +  +  +F   L 
Sbjct: 346 LPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLE 405

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM+   C  +  T N M+ V G+  M     R+   M+  G++ S  +YNTL+  YG
Sbjct: 406 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYG 465

Query: 241 EAELFGEAIHLFRL--------------------------------------MQRKEIEQ 262
                G   + F++                                      M+ K  + 
Sbjct: 466 RC---GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKP 522

Query: 263 NVVTYNTMIKIYGK--------SLEHE---------------------KATNL------M 287
           N  +Y+ +++ Y K        ++E E                     K   L       
Sbjct: 523 NDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAF 582

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           QE++ RG  P+ + ++++++++ K G   +   +F  ++ SG+  D + Y +++  Y + 
Sbjct: 583 QEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKC 642

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                A+++L++L+    +P+ +   T I    + G I+EA  +  +    G    +  +
Sbjct: 643 SESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 702

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++  ++  + ++   EV   M      P       V++SY K + FE A    SE+ E
Sbjct: 703 HTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSE 762

Query: 464 EGCVFSDQV 472
               F  +V
Sbjct: 763 TDPNFDKKV 771



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/377 (20%), Positives = 167/377 (44%), Gaps = 37/377 (9%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R   +L+ + E +R   +P+   +N +L    +    +    + + M+  G+   R TY+
Sbjct: 399 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYN 458

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           TLI  +G+ G   +A     +M     +  L  Y+ L+ +  +  D+S A SI S++++ 
Sbjct: 459 TLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTK 518

Query: 119 GIVPDLVAYNTMINVFGKA------------------------------KLFKEARL--- 145
           G  P+  +Y+ ++  + K                                 FK  RL   
Sbjct: 519 GFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGI 578

Query: 146 --LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               +E++ +G  PD V ++++L++Y +N  + +   +F  + +     DL T N ++D+
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y +   + +A+++   ++   + P VVSYNT++  + +  L  EA  +   M    +   
Sbjct: 639 YAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 698

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY+T++  Y       +A  ++  M    ++P  +TY  ++  + KA + + A     
Sbjct: 699 VVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLS 758

Query: 324 KLRSSGVEIDPVLYQTM 340
           ++  +    D  +  T+
Sbjct: 759 EVSETDPNFDKKVLHTL 775



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/166 (18%), Positives = 77/166 (46%), Gaps = 1/166 (0%)

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR-NKKYANVIEVFEKMRS 428
           T +  L+RAGR E A  +F +    G    +  +  +++++ R  + +  ++ + ++MR+
Sbjct: 178 TVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 237

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           AG  PD    + V+ +  +    + A   + +++  G       +  +L ++G   ++  
Sbjct: 238 AGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTE 297

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
              + + ++ D        ++ +AG Y RA    +A++ ++ M  +
Sbjct: 298 ALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSK 343


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 229/446 (51%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D +     Y P+   +N ++  +    +   A  L D M  +G  PD  TY  ++
Sbjct: 170 AVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A + L +MEQ ++   +++Y+ +I+   K      A+++F  +++ GI 
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + PD  ++S L++ +V+  K VEA  +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +    + T + +I+ +   D   +A ++F  M      P VV+YNTL++ + +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            +   E + +FR M ++ +  N VTYN +I+   ++ + + A  + +EM + G+ PN +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+T++    K GKL++A ++F+ L+ S +E     Y  MI    + G V     L   L 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ +   T I+   R G  EEA  +F++  + G + +   +  +I    R+    
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+ ++MRS G+  D+  I LV N
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 221/455 (48%), Gaps = 4/455 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P++   + +L     +K+   A  L D+M   G  P+  T++TLI           A+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + + +M       DLV Y  ++    K  D   A ++ ++++   + P ++ YNT+I+  
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K   +A  L +EM  +G++P+ V+YS+L++      ++ +A  + ++M E     D+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +ID + +     +A++L+  M K  IDPS+V+Y++L+  +   +   EA  +F  
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K    +VVTYNT+IK + K    E+   + +EM  RG+  N +TY+ +I    +AG 
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            D A  +F+++ S GV  + + Y T++    + G +  A  +   L+    +P       
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  + +AG++E+   +F      G   D+  +  MI  F R         +F++M+  G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             P+S     ++ +  +  + E + +L  EM+  G
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 58/546 (10%)

Query: 27  RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
           RN L   + + A  LF EM +    P    +S L++   K   FD  IS  +QM+   + 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
            +   YS LI    + S    A+++  ++   G  P++V  ++++N +  +K   EA  L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           +++M   G +P+TV+++TL++    ++K  EA+++   M    C  DL T  ++++    
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN---G 230

Query: 207 LDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           L    D D  F  + KM    ++P V+ YNT++    + +   +A++LF+ M+ K I  N
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290

Query: 264 VVTYNTMIKIY--------------------------------------GKSLEHEKATN 285
           VVTY+++I                                         GK +E EK   
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK--- 347

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L  EM  R I+P+ +TYS++I  +    +LD A  +F+ + S     D V Y T+I  + 
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           +   V     +  E+ Q     NT+     I  L +AG  + A  +F++    G   +I 
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +++   +N K    + VFE ++ +   P  +   +++    K  + E   DL+  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 462 QEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
             +G V  D V +  M+S +  +      ++LF+ +  D  +     ++ +     RA R
Sbjct: 528 SLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI----RA-R 581

Query: 521 LNDASR 526
           L D  R
Sbjct: 582 LRDGDR 587



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P VF ++ ++   ++  +   A  L+DEM +R I P   TYS+LI  F      D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M       D+V Y+ LI+   K     + + +F  +   G+V + V YN +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A     A+ + +EM   GV P+ ++Y+TLL+   +N K  +A+ VF  +      
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             + T NIMI+   +    +D   LF ++   G+ P VV+YNT++  +       EA  L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+      N   YNT+I+   +  + E +  L++EM++ G   +A T   +  +   
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-H 617

Query: 312 AGKLDRA 318
            G+LD++
Sbjct: 618 DGRLDKS 624



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ + ++  P+++ YN+++  + +A + E    LF  +  +G+ PD   Y+T+
Sbjct: 484 KAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G  + A +  ++M++D    +   Y+ LI    +  D   +  +   ++S G 
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
             D      + N+    +L K
Sbjct: 603 AGDASTIGLVTNMLHDGRLDK 623


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 222/433 (51%), Gaps = 4/433 (0%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y P+   +N ++  +    +   A  L D M  +G  PD  TY  ++    K G  D A 
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + L +MEQ ++   +++Y+ +I+   K      A+++F  +++ GI P++V Y+++I+  
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 + +A  L+ +M E+ + PD  ++S L++ +V+  K VEA  ++ EM + +    +
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T + +I+ +   D   +A ++F  M      P VV+YNTL++ + + +   E + +FR 
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            M ++ +  N VTYN +I+   ++ + + A  + +EM + G+ PN +TY+T++    K GK
Sbjct: 1036 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            L++A ++F+ L+ S +E     Y  MI    + G V     L   L     +P+ +   T
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155

Query: 371  AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             I+   R G  EEA  +F++  + G + +   +  +I    R+       E+ ++MRS G
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215

Query: 431  YFPDSHIIALVLN 443
            +  D+  I LV N
Sbjct: 1216 FAGDASTIGLVTN 1228



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 212/420 (50%), Gaps = 14/420 (3%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ +N+V+       Q  LA  +  +M + G  PDR T  +L+  F +      A+S + 
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +     D+V Y+ +I+   K    + A   F  ++  GI P++V Y  ++N    + 
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + +A  L+ +M ++ + P+ ++YS LL+ +V+N K +EA  +F EM  ++   D+ T +
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+     D   +A+++F  M   G    VVSYNTL+  + +A+   + + LFR M ++
Sbjct: 403 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I+ + ++ + +KA     +M   GI P+  TY+ ++      G+L++A
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 522

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
            ++F+ ++   +++D V Y T+I    + G V  A  L   L     +P+ +   T ++ 
Sbjct: 523 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582

Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           L   G + E   ++ +    G +K D ++    I L +         E+ +KM S GY P
Sbjct: 583 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA---------ELIKKMLSCGYAP 633



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E+ +  P V  YN ++  + + K  + A  LF EM  +GI P+  TYS+LI+C    G +
Sbjct: 862  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A   L  M + +++ D+  +S LI+   K     +A  ++  +    I P +V Y+++
Sbjct: 922  SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            IN F       EA+ + E M  +   PD V+Y+TL+  + +  +  E + VF EM++   
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 191  PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
              +  T NI+I      G  DMA++   +F  M   G+ P++++YNTLL    +     +
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 1098

Query: 248  AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            A+ +F  +QR ++E  + TYN MI+   K+ + E   +L   +  +G++P+ + Y+T+I+
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 1158

Query: 308  IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             + + G  + A  LF++++  G   +   Y T+I A  R G    +  L+ E+R 
Sbjct: 1159 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 1213



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 237/528 (44%), Gaps = 74/528 (14%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            ++R  PS+  ++ +L  + +  ++++   L ++M+  GI  + YTYS LI CF +     
Sbjct: 688  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747

Query: 72   SAISWLQQM--------------------------------EQDRVSG---DLVLYSNLI 96
             A++ L +M                                +Q  V+G   + V ++ LI
Sbjct: 748  LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 97   ELARKLSDYSKAISIFSRLKSSGIVPDLVA------------------------------ 126
                  +  S+A+++  R+ + G  PDLV                               
Sbjct: 808  HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 127  -----YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
                 YNT+I+   K K   +A  L +EM  +G++P+ V+YS+L++      ++ +A  +
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 182  FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             ++M E     D+ T + +ID + +     +A++L+  M K  IDPS+V+Y++L+  +  
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 242  AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
             +   EA  +F  M  K    +VVTYNT+IK + K    E+   + +EM  RG+  N +T
Sbjct: 988  HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047

Query: 302  YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
            Y+ +I    +AG  D A  +F+++ S GV  + + Y T++    + G +  A  +   L+
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107

Query: 362  ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                +P        I  + +AG++E+   +F      G   D+  +  MI  F R     
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167

Query: 418  NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                +F++M+  G  P+S     ++ +  +  + E + +L  EM+  G
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 216/476 (45%), Gaps = 29/476 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P       ++    R  +   A  L D+M + G  PD   Y+ +I    K    + A 
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + +++E+  +  ++V Y+ L+      S +S A  + S +    I P+++ Y+ +++ F
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA+ L EEM    + PD V+YS+L+N    + +  EA  +F  M    C  D+
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +I+ + +    +D  +LF  M + G+  + V+YNTL++ + +A    +A   F  
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M    I  ++ TYN ++     + E EKA  + ++MQ R ++ + +TY+T+I    K GK
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  LF  L   G++ D V Y TM+      GL+   + L  +++Q   +  +  ++ 
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS- 612

Query: 375 LARAGRIEEATWVFRQAFDAGE----VKDISVFGCMIEL-----------------FSRN 413
               G I  +  + ++    G     +KDI    C   L                  SRN
Sbjct: 613 ---DGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRN 669

Query: 414 K----KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                K  + + +F +M  +  FP     + +L++  K+ +F+    L  +MQ  G
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 242/543 (44%), Gaps = 52/543 (9%)

Query: 27   RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
            RN L   + + A  LF EM +    P    +S L++   K   FD  IS  +QM+   + 
Sbjct: 668  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727

Query: 87   GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
             +   YS LI    + S    A+++  ++   G  P++V  ++++N +  +K   EA  L
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 147  IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
            +++M   G +P+TV+++TL++    ++K  EA+++   M    C  DL T  ++++   +
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847

Query: 207  LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
                  A  L   M +  ++P V+ YNT++    + +   +A++LF+ M+ K I  NVVT
Sbjct: 848  RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 267  YNTMIKIY--------------------------------------GKSLEHEKATNLMQ 288
            Y+++I                                         GK +E EK   L  
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK---LYD 964

Query: 289  EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            EM  R I+P+ +TYS++I  +    +LD A  +F+ + S     D V Y T+I  + +  
Sbjct: 965  EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024

Query: 349  LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             V     +  E+ Q     NT+     I  L +AG  + A  +F++    G   +I  + 
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084

Query: 405  CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
             +++   +N K    + VFE ++ +   P  +   +++    K  + E   DL+  +  +
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144

Query: 465  GCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
            G V  D V +  M+S +  +      ++LF+ +  D  +     ++ +     RA RL D
Sbjct: 1145 G-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI----RA-RLRD 1198

Query: 524  ASR 526
              R
Sbjct: 1199 GDR 1201



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 220/475 (46%), Gaps = 21/475 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P + AYN ++ ++ + K+   A   F E+ ++GI P+  TY+ L+        + 
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L  M + +++ +++ YS L++   K     +A  +F  +    I PD+V Y+++I
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA  + + M  +G   D VSY+TL+N + +  +  + + +F EM++    
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + Q      A   F  M   GI P + +YN LL    +     +A+ +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  MQ++E++ ++VTY T+I+   K+ + E+A +L   +  +G++P+ +TY+T+++    
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 585

Query: 312 AGKLDRAAMLFQKLRSSGV--------EIDPVLYQTMIVAYERVGLVAH---------AK 354
            G L     L+ K++  G+        + D  L   +I      G              K
Sbjct: 586 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCK 645

Query: 355 RLLHELRQPNTIPRETAITILARAG----RIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           + L  LR  +          L+R G    ++++A  +F +   +     I  F  ++   
Sbjct: 646 KALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 705

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++  K+  VI + E+M++ G   + +  ++++N + +  +   A  +  +M + G
Sbjct: 706 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 760



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 4/431 (0%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    +V ++ L+    KL  Y   IS+  +++  GI  DL  +N 
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN F        A  ++ +M + G +PD V+  +L+N +   ++  +A+S+  +M E+ 
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   N +ID   +     DA   F  + + GI P+VV+Y  L+     +  + +A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M +K+I  NV+TY+ ++  + K+ +  +A  L +EM    I+P+ +TYS++I   
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
               ++D A  +F  + S G   D V Y T+I  + +   V    +L  E+ Q     NT
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I    +AG +++A   F Q    G   DI  +  ++     N +    + +FE 
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+      D      V+    K  + E A  L+  +  +G       +  M+S    +  
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 486 FNMLESLFERL 496
            + +E+L+ ++
Sbjct: 589 LHEVEALYTKM 599



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 201/453 (44%), Gaps = 15/453 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           LR  +   A  LF +M +    P    ++ L++   K   +D  IS  ++ME   +  DL
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 223

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             ++ +I         S A+SI  ++   G  PD V   +++N F +     +A  L+++
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E G KPD V+Y+ +++   +  +  +A   F E+       ++ T   +++       
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA RL   M K  I P+V++Y+ LL  + +     EA  LF  M R  I+ ++VTY++
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I         ++A  +   M ++G   + ++Y+T+I  + KA +++    LF+++   G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           +  + V Y T+I  + + G V  A+    ++      P+       +  L   G +E+A 
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV---L 442
            +F          DI  +  +I    +  K      +F  +   G  PD      +   L
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583

Query: 443 NSYGKLREFETADDLYSEMQEEG-----CVFSD 470
            + G L E E    LY++M++EG     C  SD
Sbjct: 584 CTKGLLHEVEA---LYTKMKQEGLMKNDCTLSD 613



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 1/307 (0%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E + +P VF ++ ++   ++  +   A  L+DEM +R I P   TYS+LI  F      D
Sbjct: 933  ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    + M       D+V Y+ LI+   K     + + +F  +   G+V + V YN +I
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                +A     A+ + +EM   GV P+ ++Y+TLL+   +N K  +A+ VF  +      
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
              + T NIMI+   +    +D   LF ++   G+ P VV+YNT++  +       EA  L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            F+ M+      N   YNT+I+   +  + E +  L++EM++ G   +A T   +  +   
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-H 1231

Query: 312  AGKLDRA 318
             G+LD++
Sbjct: 1232 DGRLDKS 1238



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 110/508 (21%), Positives = 211/508 (41%), Gaps = 56/508 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + + +P+V  Y+ +L   ++  +   A  LF+EM +  I PD  TYS+LI         D
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M       D+V Y+ LI    K       + +F  +   G+V + V YNT+I
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F +A    +A+    +M   G+ PD  +Y+ LL    +N +  +AL +F +M +    
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD+ T   +I    +    ++A  LF S+   G+ P +V+Y T++       L  E   L
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595

Query: 252 FRLMQRKEIEQNVVTYN------------------------------------TMIKIY- 274
           +  M+++ + +N  T +                                    ++++ + 
Sbjct: 596 YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFS 655

Query: 275 GKS---------------LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           GK+               L+ + A  L  EM      P+ I +S +++   K  K D   
Sbjct: 656 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 715

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
            L +++++ G+  +   Y  +I  + R   +  A  +L ++     +PN +   + +   
Sbjct: 716 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 775

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             + RI EA  +  Q F  G   +   F  +I     + K +  + + ++M + G  PD 
Sbjct: 776 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQE 463
               +V+N   K  + + A +L ++M++
Sbjct: 836 VTYGVVVNGLCKRGDTDLAFNLLNKMEQ 863



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1    RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +++ + +++ + ++  P+++ YN+++  + +A + E    LF  +  +G+ PD   Y+T+
Sbjct: 1098 KAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 1156

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I+ F ++G  + A +  ++M++D    +   Y+ LI    +  D   +  +   ++S G 
Sbjct: 1157 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 1216

Query: 121  VPDLVAYNTMINVFGKAKLFK 141
              D      + N+    +L K
Sbjct: 1217 AGDASTIGLVTNMLHDGRLDK 1237


>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
          Length = 528

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 194/364 (53%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 157 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 216

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   ++ KA ++   + +SG+ PD   YN MI+ FGK
Sbjct: 217 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 276

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + MRE+G++PD V+++TL++ + +  +   A+ +F EM E NCPL  TT
Sbjct: 277 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 336

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+    +  + +   M++ G+ P++++Y TL+ VYG +  F EA+     M+
Sbjct: 337 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 396

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 397 ADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIA 456

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  + Q ++ +G+  D + Y T++ A  RV        +  E+      P   A  +L 
Sbjct: 457 EAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLR 516

Query: 377 RAGR 380
            A R
Sbjct: 517 SALR 520



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 215/448 (47%), Gaps = 5/448 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA+  + A  L    +  G+ P     + LI+  G      
Sbjct: 81  ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 140

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   K+     A  +   +   G+ PD   Y+ +
Sbjct: 141 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 200

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +  ++ +A +V  EM+    
Sbjct: 201 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 260

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      AI 
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 380

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           ++G+   A    + +++ G++    +Y  ++ AY + GL  HA  ++  +R    + +T+
Sbjct: 381 RSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 440

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I       RI EA  V +   + G   D+  +  +++   R +++  V  ++E+M
Sbjct: 441 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 500

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
            ++G  PD    A++ ++   ++    A
Sbjct: 501 ITSGCAPDRKARAMLRSALRYMKHMRVA 528



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 186/428 (43%), Gaps = 44/428 (10%)

Query: 63  CFG---KEGMFDSAI-SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           CFG     G+ D  + S      + R+  D  L+S+LI    +      A+ + +  ++ 
Sbjct: 58  CFGVVAARGVIDCEVPSMYCGGGESRLEPDAPLFSDLISAFARARLPDAALELLASAQAI 117

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVE 177
           G+ P   A   +I+  G A+   EA  L  E    G +KP T +Y+ LL  YV+      
Sbjct: 118 GLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVK------ 171

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
                                      G L   K+A+++   M + G+ P   +Y+ L+ 
Sbjct: 172 --------------------------IGSL---KNAEQVLDEMSQCGVAPDEATYSLLVD 202

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            Y  A  +  A  L + M+   ++ +   ++ ++  +    E +KA  +++EM   G+ P
Sbjct: 203 AYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRP 262

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           +   Y+ +I  +GK   L  A   F ++R  G+E D V + T+I A+ + G    A  L 
Sbjct: 263 DRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF 322

Query: 358 HELRQPN----TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+R+ N    T      I +L    R E    +  +  + G V +I  +  +++++ R+
Sbjct: 323 DEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRS 382

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            ++   ++  E M++ G  P S +   ++N+Y +    + A ++   M+ +G   S  V 
Sbjct: 383 GRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVL 442

Query: 474 FQMLSLYG 481
             +++ +G
Sbjct: 443 NSLINAFG 450



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/381 (19%), Positives = 155/381 (40%), Gaps = 32/381 (8%)

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           E  ++PD   +S L++ +        AL + A    +           +I   G      
Sbjct: 81  ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 140

Query: 212 DADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           +A+ LF      G I P   +YN LL+ Y +      A  +   M +  +  +  TY+ +
Sbjct: 141 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 200

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +  Y ++   E A  L++EM+  G++P++  +S I+A +   G+  +A  + +++ +SGV
Sbjct: 201 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 260

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
             D   Y  MI  + +   + HA      +R+    P                       
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP----------------------- 297

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                   D+  +  +I+   +  ++   IE+F++MR +     +    +++N  G+ + 
Sbjct: 298 --------DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQR 349

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHV 510
           +E  + + +EM+E+G V +   +  ++ +YG    F       E + +D       ++H 
Sbjct: 350 WEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHA 409

Query: 511 VAGIYERANRLNDASRIMNRM 531
           +   Y +    + A  ++  M
Sbjct: 410 LVNAYAQRGLADHALNVVKAM 430



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEE 383
           S +E D  L+  +I A+ R  L   A  LL   +     PR  A+T L      A R+ E
Sbjct: 82  SRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAE 141

Query: 384 ATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           A  +F + F AGE+K     +  +++ + +     N  +V ++M   G  PD    +L++
Sbjct: 142 AEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLV 201

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           ++Y +   +E+A  L  EM+ +G   S  V  ++L+ +  R ++    ++   + +    
Sbjct: 202 DAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 261

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             +  ++V+   + + N L  A    +RM +
Sbjct: 262 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMRE 292


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 236/477 (49%), Gaps = 40/477 (8%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  + ELA  +FD   + G     Y +S LI+ +G+ G  + AI     M+ + +  +LV
Sbjct: 202 RLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ +I+   K   ++ K + IF  + S+G+ PD + +N+++ V  +  L++ AR L   
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA 321

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M ++G+  D  +Y+TLL+   +  +   A  + +EM   N   ++ T + MID Y ++  
Sbjct: 322 MVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGR 381

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA  +F  M+ +G+    VSYNTLL VY +   F +A+ + + M+   I ++VVTYN 
Sbjct: 382 LDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNA 441

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK   +++   + +EM+   + PN +TYST+I ++ K G    A  +F++ + +G
Sbjct: 442 LLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAG 501

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR----- 380
           ++ D VLY  +I A  + GLV  +  LL E+ +    PN +   + I    R+       
Sbjct: 502 LKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVV 561

Query: 381 ------------------IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN---- 418
                             ++EA  +  QA D  + + I +FG +    +   K +     
Sbjct: 562 DDSGETTALQVESLSSIVVQEA--IESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEI 619

Query: 419 --VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             ++ VF+KM      P+    + +LN+  +   FE A  L  E++    +F +QV+
Sbjct: 620 LCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELR----LFDNQVY 672



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 170/336 (50%), Gaps = 29/336 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +F YN +L  V +  Q +LA  +  EM  + I P+  TYST+I  + K G  D A++   
Sbjct: 331 IFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFN 390

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+   V  D V Y+ L+ +  KL  + +A+ +   ++++GI  D+V YN ++  +GK  
Sbjct: 391 EMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQY 450

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + E R + EEM+   V P+ ++YSTL+++Y +   + EA+ VF E  +     D+   +
Sbjct: 451 RYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYS 510

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------ELFGEAI-- 249
            +ID   +  + + +  L   M K GI P+VV+YN+++  +G +       +  GE    
Sbjct: 511 ALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTAL 570

Query: 250 ---HLFRLMQRKEIEQNVVTY--NTMIKIYGKSLEHEKAT--------------NLMQEM 290
               L  ++ ++ IE        N +I+I+GK L  EKA                + Q+M
Sbjct: 571 QVESLSSIVVQEAIESQAADKEDNRIIEIFGK-LAAEKACEAKNSGKQEILCILGVFQKM 629

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
               I+PN +T+S I+    +    + A+ML ++LR
Sbjct: 630 HELKIKPNVVTFSAILNACSRCDSFEDASMLLEELR 665



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 231/490 (47%), Gaps = 22/490 (4%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSG---DLVLYSNLIELARKLSD 104
           R   PD YT+  L+   G  G    A+   +     R SG      L S +I    +L  
Sbjct: 149 RLCGPDDYTF--LLRELGNRGDSAKAVRCFE-FAVRRESGKNEQGKLASAMISTLGRLGK 205

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              A ++F      G    + A++ +I+ +G++    EA  + + M+  G+ P+ V+Y+ 
Sbjct: 206 VELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNA 265

Query: 165 LLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           +++   +   +F + + +F  M       D  T N ++ V  +  + + A RLF +M   
Sbjct: 266 VIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDK 325

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GID  + +YNTLL    +      A  +   M  K I  NVVTY+TMI  Y K    + A
Sbjct: 326 GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            N+  EM+  G+  + ++Y+T+++++ K G+ ++A  + +++ ++G+  D V Y  ++  
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y +       +R+  E+++    PN +   T I + ++ G  +EA  VFR+   AG   D
Sbjct: 446 YGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKAD 505

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           + ++  +I+   +N    + + + ++M   G  P+      +++++G+    +   D   
Sbjct: 506 VVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSG 565

Query: 460 E---MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD-----SNINKKELHHVV 511
           E   +Q E    S  V  + +    A K+ N +  +F +L ++      N  K+E+  ++
Sbjct: 566 ETTALQVES--LSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCIL 623

Query: 512 AGIYERANRL 521
            G++++ + L
Sbjct: 624 -GVFQKMHEL 632



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 34/255 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A     V  YN +L    +  +++    +F+EM++  ++P+  TYSTLI  + K G++
Sbjct: 428 ENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLY 487

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++ +Q  +  D+VLYS LI+   K      ++++   +   GI P++V YN++
Sbjct: 488 KEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSI 547

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ FG++     A+ ++++  E          +T L         VE+LS       +  
Sbjct: 548 IDAFGRS---ASAQCVVDDSGE----------TTALQ--------VESLSSIVVQEAIES 586

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADR-------------LFWSMRKMGIDPSVVSYNTLLR 237
                  N +I+++G+L   K  +              +F  M ++ I P+VV+++ +L 
Sbjct: 587 QAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILN 646

Query: 238 VYGEAELFGEAIHLF 252
                + F +A  L 
Sbjct: 647 ACSRCDSFEDASMLL 661



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 151/342 (44%), Gaps = 17/342 (4%)

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           YG+ D A +   L +  R  G D     Y  LLR  G      +A+  F    R+E  +N
Sbjct: 132 YGKDDKALENVLLNFESRLCGPD----DYTFLLRELGNRGDSAKAVRCFEFAVRRESGKN 187

Query: 264 VVT--YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                 + MI   G+  + E A  +       G       +S +I+ +G++G  + A  +
Sbjct: 188 EQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKV 247

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGL-----VAHAKRLLHELRQPNTIPRETAITILA 376
           F  ++S+G+  + V Y  +I A  + G+     V     +L    QP+ I   + + + +
Sbjct: 248 FDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCS 307

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G  E A  +F    D G  +DI  +  +++   +  +     E+  +M +    P+  
Sbjct: 308 RGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVV 367

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFER 495
             + +++ Y K+   + A ++++EM+  G V  D+V +  +LS+Y     F     + + 
Sbjct: 368 TYSTMIDGYAKVGRLDDALNMFNEMKFLG-VGLDRVSYNTLLSVYAKLGRFEQALDVCKE 426

Query: 496 LDSDSNINKKELHH--VVAGIYERANRLNDASRIMNRMNKRR 535
           ++ ++ I K  + +  ++AG Y +  R ++  R+   M + R
Sbjct: 427 ME-NAGIRKDVVTYNALLAG-YGKQYRYDEVRRVFEEMKRGR 466


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 217/461 (47%), Gaps = 5/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+  +P+V  Y+ V+    R  + + A+ LF +M + G  P+  TY+TL++   + G+ 
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L +M +  +  D   Y  L+    K      A+ +F    +    PD+VAY+T+
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    KA    EA  L E+MRE   +PD V+++ L++   +  +  EA  V   M + NC
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T + +ID   +    +DA  +F  M   GI+P+VV+YN+L+  +        A+ 
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M       +++TYNT+I    K+    +A  L  +M+ +   P+ ITYS +I  + 
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 487

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K  ++D A  LF  +    V  D V + T++  Y   GLV  A+RLL E+   +  P   
Sbjct: 488 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 547

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             T L     + GR+ EA  V ++    G   ++  +  +I+ F R  K      + E+M
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ-EEGC 466
              G  P+      ++  +    + E A  +   ++ +E C
Sbjct: 608 VGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC 648



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 223/453 (49%), Gaps = 4/453 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  + +++  + +A +   A   F +M+++G  P+ +TY+ LI  F K      A   L
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++  ++ ++V YS +I    + +    A  +F ++  +G +P+LV YNT+++   + 
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  EA  L++EMRE+G++PD  SY TL+    +  K   AL VF + +  +CP D+   
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I    +     +A +LF  MR+   +P VV++  L+    + +   EA  +   M+ 
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    NV+TY+++I    K+ +   A  + + M  RGIEPN +TY+++I  +     +D 
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A +L +++ ++G   D + Y T+I    + G    A RL  +++     P+ I     I 
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +  RI+ A  +F        + D+  F  ++E +       +   + E+M ++   P
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           D +    +++ + K+     A  +   M + GC
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 577



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 218/458 (47%), Gaps = 6/458 (1%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           N      P V AY+ ++  + +A + + A  LF++MR+    PD  T++ L+    K   
Sbjct: 292 NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
              A   L+ ME    + +++ YS+LI+   K      A  +F R+   GI P++V YN+
Sbjct: 352 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+ F        A LL+EEM   G  PD ++Y+TL++   +  +  EA  +F +M    
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ T + +I  + +L+    A  LF  M K  + P VV+++TL+  Y  A L  +A 
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M   +   +V TY +++  + K     +A  +++ M  RG +PN +TY+ +I  +
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPR 368
            +AGK   A  L +++  +GV+ + + Y+++I  +   G +  A+++L  L R  N    
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651

Query: 369 ETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
             A  +    L R GR+  A  +      +G      ++  +I    + K+    +EV E
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711

Query: 425 KMR-SAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +M  S    P++     V+    +    E A+ L  E+
Sbjct: 712 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 246/525 (46%), Gaps = 11/525 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF Y VV++ + ++   + A  L +EMR+ G  PD   Y+ +I    K      A+ 
Sbjct: 56  TPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALD 115

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + ME ++   +++ ++ +I+   K +   +A + F+++K  G VP+   YN +IN F 
Sbjct: 116 YFRSMECEK---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFC 172

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A LL++EM+E G+ P+ V+YST+++ +    K   A  +F +M E  C  +L 
Sbjct: 173 KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV 232

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++    +  +  +A  L   MR+ G+ P   SY+TL+    +      A+ +F   
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              +   +VV Y+T+I    K+   ++A  L ++M+    EP+ +T++ ++    K  +L
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETA 371
             A  + + +       + + Y ++I    + G V  A    KR++    +PN +   + 
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I        ++ A  +  +    G + DI  +  +I+   +  +      +F  M++   
Sbjct: 413 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 472

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLE 490
            PD    + ++  + KL   + A  L+ +M ++  V  D V F  L   Y      +  E
Sbjct: 473 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA-VLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 491 SLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            L E +  SD + +      +V G + +  R+ +A R++ RM KR
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDG-FCKVGRMVEARRVLKRMAKR 575



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 245/528 (46%), Gaps = 7/528 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W +++  +  +V+ YN +   +LRA++ +    +       GI P+ +TY+ +I    K 
Sbjct: 13  WASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKS 72

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A   L++M +     D  +Y+ +I    K  + +KA+  F  ++      +++ +
Sbjct: 73  GDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE---KNVITW 129

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MI+   KA    EA     +M+++G  P+  +Y+ L+N + + HK   A  +  EM E
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                ++ T + +I  + +      A +LF  M + G  P++V+YNTLL       L  E
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L   M+ + ++ +  +Y+T++    K+ + + A  + ++  N    P+ + YST+IA
Sbjct: 250 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 309

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
              KAG+LD A  LF+K+R +  E D V +  ++    +   +  A+++L  +      P
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N I   + I  L + G++ +A  VF++    G   ++  +  +I  F       + + + 
Sbjct: 370 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 429

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+M + G  PD      +++   K      A+ L+ +M+ + C      +  ++  +   
Sbjct: 430 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 489

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +  +M  +LF+ +   + +        +   Y  A  ++DA R++  M
Sbjct: 490 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 230/490 (46%), Gaps = 4/490 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YNV++    +  +   A+ L  EM++ G+AP+  TYST+I  F ++   D+A   
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +QM ++    +LV Y+ L+    +     +A  +   ++  G+ PD  +Y+T++    K
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  + E+       PD V+YSTL+    +  +  EA  +F +M E +C  D+ T
Sbjct: 279 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++D   + D  ++A ++  +M      P+V++Y++L+    +     +A  +F+ M 
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + IE NVVTYN++I  +  +   + A  LM+EM   G  P+ ITY+T+I    K G+  
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQ---PNTIPRETAI 372
            A  LF  +++     D + Y  +I  + ++  +  A+ L  + L+Q   P+ +   T +
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                AG +++A  +  +   +    D+  +  +++ F +  +      V ++M   G  
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 578

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+      +++++ +  +   A  L  EM   G   +   +  ++  +    D      +
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638

Query: 493 FERLDSDSNI 502
            ERL+ D N 
Sbjct: 639 LERLERDENC 648



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 41/359 (11%)

Query: 215 RLF-WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           R F W+ ++ G D +V +YN L      A    E  H+ +      I  NV TY  +I+ 
Sbjct: 9   RFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQG 68

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNA--------------------------------IT 301
             KS + +KA  L++EM+  G  P+A                                IT
Sbjct: 69  LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVIT 128

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++ +I    KA +L  A   F K++  G   +   Y  +I  + +V  V  A  LL E++
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    PN +   T I    R  +++ A  +FRQ  + G + ++  +  ++    RN    
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              E+ ++MR  G  PD      ++    K  + + A  ++ +     C   D V +  L
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP-PDVVAYSTL 307

Query: 478 SLYGARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            + G  K   + E+  LFE++  +S          +     + +RL +A +++  M  R
Sbjct: 308 -IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365


>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
 gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 185/331 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 290 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 349

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   ++ KA ++   + +SG+ PD   YN MI+ FGK
Sbjct: 350 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 409

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + MRE+G++PD V+++TL++ + +  +   A+ +F EM E NCPL  TT
Sbjct: 410 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 469

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+    +  + +   M++ G+ P++++Y TL+ VYG +  F EA+     M+
Sbjct: 470 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 530 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIA 589

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q ++ +G+  D + Y T++ A  RV
Sbjct: 590 EAFSVLQFMKENGLRPDVITYTTLMKALIRV 620



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 216/448 (48%), Gaps = 5/448 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA+  + A  L    +  G+ P     + LI+  G      
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   K+     A  +   +   G+ PD   Y+ +
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 333

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +  ++ +A +V  EM+    
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 393

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      AI 
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  +R    + +T+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I       RI EA  V +   + G   D+  +  +++   R +++  V  ++E+M
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
            ++G  PD    A++ ++   ++    A
Sbjct: 634 ITSGCAPDRKARAMLRSALRYMKHMRVA 661



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/394 (20%), Positives = 165/394 (41%), Gaps = 8/394 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA---LSVFAEMNEVNCPLDLTTCNIMID 202
           L+  +RE    PD  SYS LL   +      +A     +  ++ E     D    + +I 
Sbjct: 170 LLGLLREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLIS 229

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIE 261
            + +  +   A  L  S + +G+ P   +   L+   G A    EA  LF       EI+
Sbjct: 230 AFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIK 289

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                YN ++K Y K    + A  ++ EM   G+ P+  TYS ++  + +AG+ + A +L
Sbjct: 290 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 349

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILAR 377
            +++ + GV+    ++  ++  +   G    A  +L E+      P        I    +
Sbjct: 350 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 409

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
              +  A   F +  + G   D+  +  +I+   +  ++   IE+F++MR +     +  
Sbjct: 410 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 469

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             +++N  G+ + +E  + + +EM+E+G V +   +  ++ +YG    F       E + 
Sbjct: 470 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +D       ++H +   Y +    + A  ++  M
Sbjct: 530 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEE 383
           S +E D  L+  +I A+ R  L   A  LL   +     PR  A+T L      A R+ E
Sbjct: 215 SRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAE 274

Query: 384 ATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           A  +F + F AGE+K     +  +++ + +     N  +V ++M   G  PD    +L++
Sbjct: 275 AEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLV 334

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           ++Y +   +E+A  L  EM+ +G   S  V  ++L+ +  R ++    ++   + +    
Sbjct: 335 DAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 394

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             +  ++V+   + + N L  A    +RM +
Sbjct: 395 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMRE 425


>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 810

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 234/518 (45%), Gaps = 45/518 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++    RA QW  A  L D+M +  IAP R TY+ LI   G  G +  A+  
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M  + V  DLV ++ ++   +    YSKA+S F  +K + + PD   +N +I    K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295

Query: 137 AKLFKEARLLIEEMRE-------------------------------------QGVKPDT 159
                +A  L   MRE                                     +G+KP+ 
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           VSY+ L+  Y  +     ALSV  ++ +     D+ +   +++ YG+      A  +F  
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRK    P+VV+YN L+  YG      EA+ +FR M++  I+ NVV+  T++    +S +
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                 ++   Q+RGI  N   Y++ I  +  A +L++A  L+Q +R   V+ D V +  
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           +I    R+     A   L E+ +  +IP       L + G++ EA  +F Q   AG   D
Sbjct: 536 LISGSCRMSKYPEAISYLKEM-EDLSIP-------LTKEGQVTEAESIFNQMKMAGCEPD 587

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  M+  ++ ++K+    E+F +M + G  PDS   + ++ ++ K  +      L  
Sbjct: 588 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 647

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
            M+E+   F+  V F++ S     +++     L + +D
Sbjct: 648 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 685



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 43/421 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  +L +  R++Q   A  +F  MR+    P+  TY+ LI  +G  G    A+  
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +QMEQD +  ++V    L+    +        ++ S  +S GI  +  AYN+ I  +  
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   ++A  L + MR++ VK D+V+++ L++      K+ EA+S   EM +++ PL    
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE- 566

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                   GQ+    +A+ +F  M+  G +P V++Y ++L  Y  +E +G+A  LF  M+
Sbjct: 567 --------GQV---TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 615

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              IE + +  + +++ + K  +      LM  M+ + I      +  I +      +  
Sbjct: 616 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 675

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           RA  L Q +       DP L    I      GL     ++LH               +  
Sbjct: 676 RAIDLIQMM-------DPYLPSLSI------GLT---NQMLH---------------LFG 704

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           ++G++E    +F +   +G   ++  +  ++E       +   IEV E M  AG  P + 
Sbjct: 705 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQ 764

Query: 437 I 437
           +
Sbjct: 765 M 765



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 126/297 (42%), Gaps = 31/297 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+MI ++ + +    A  LF+ M+K    P   +Y+ L+  +G A  +  A++L   M R
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  +  TYN +I   G S    +A  + ++M + G+ P+ +T++ +++ +    +  +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A   F+ ++ + V  D   +  +I    ++G  + A  L + +R+     R         
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR--------- 317

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
                                D+  F  ++ L+S   +  N   VFE M + G  P+   
Sbjct: 318 --------------------PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLF 493
              ++ +Y       TA  +  ++++ G +  D V +  +L+ YG  +     + +F
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTCLLNSYGRSRQPGKAKEVF 413


>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 185/331 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 290 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 349

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   ++ KA ++   + +SG+ PD   YN MI+ FGK
Sbjct: 350 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 409

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + MRE+G++PD V+++TL++ + +  +   A+ +F EM E NCPL  TT
Sbjct: 410 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 469

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+    +  + +   M++ G+ P++++Y TL+ VYG +  F EA+     M+
Sbjct: 470 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 530 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIA 589

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q ++ +G+  D + Y T++ A  RV
Sbjct: 590 EAFSVLQFMKENGLRPDVITYTTLMKALIRV 620



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 216/448 (48%), Gaps = 5/448 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA+  + A  L    +  G+ P     + LI+  G      
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   K+     A  +   +   G+ PD   Y+ +
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 333

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +  ++ +A +V  EM+    
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 393

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      AI 
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  +R    + +T+
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I       RI EA  V +   + G   D+  +  +++   R +++  V  ++E+M
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
            ++G  PD    A++ ++   ++    A
Sbjct: 634 ITSGCAPDRKARAMLRSALRYMKHMRVA 661



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/394 (20%), Positives = 166/394 (42%), Gaps = 8/394 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA---LSVFAEMNEVNCPLDLTTCNIMID 202
           L+  +RE    PD  SYS LL L +      EA     +  ++ E     D    + +I 
Sbjct: 170 LLGLLREHSFLPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLIS 229

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIE 261
            + +  +   A  L  S + +G+ P   +   L+   G A    EA  LF       EI+
Sbjct: 230 AFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIK 289

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                YN ++K Y K    + A  ++ EM   G+ P+  TYS ++  + +AG+ + A +L
Sbjct: 290 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 349

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILAR 377
            +++ + GV+    ++  ++  +   G    A  +L E+      P        I    +
Sbjct: 350 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 409

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
              +  A   F +  + G   D+  +  +I+   +  ++   IE+F++MR +     +  
Sbjct: 410 YNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTT 469

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             +++N  G+ + +E  + + +EM+E+G V +   +  ++ +YG    F       E + 
Sbjct: 470 YNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +D       ++H +   Y +    + A  ++  M
Sbjct: 530 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS---SGVEIDPVLYQTMIV 342
           L+  ++     P+  +YS ++A+         AA+L + L     S +E D  L+  +I 
Sbjct: 170 LLGLLREHSFLPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLIS 229

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      A R+ EA  +F + F AGE+K
Sbjct: 230 AFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIK 289

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + +     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 290 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 349

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R ++    ++   + +      +  ++V+   + +
Sbjct: 350 LKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGK 409

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    +RM +
Sbjct: 410 YNCLGHAMDAFDRMRE 425


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 242/512 (47%), Gaps = 42/512 (8%)

Query: 16  SPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +P++  YNVVL NV       W     L + MR RG+APD YTY+TLI+C  +  +++ A
Sbjct: 225 NPTLITYNVVL-NVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEA 283

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +   QQM+ +  + D V Y+ L+++  K     +A+ +   ++++G  P  V YN++I+ 
Sbjct: 284 VHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISA 343

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL--------------------------- 166
           + K  L +EA  L  +M  +G+KPD  +Y+TLL                           
Sbjct: 344 YAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPN 403

Query: 167 ----NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
               N  ++ H    KF E + VF ++   NC  D+ T N ++ V+GQ  M      +F 
Sbjct: 404 ICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFK 463

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M++ G      ++NTL+  Y     F +A+ +++ M    +  ++ TYN ++    +  
Sbjct: 464 EMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGG 523

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E++  ++ EM++   +PN ++YS+++  +    +++R     +++ S  VE   VL +
Sbjct: 524 LWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLK 583

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           T+++   +  L+   +R   ELR+    P+       ++I  R   + +A  +     + 
Sbjct: 584 TLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHET 643

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                ++ +  ++ ++SR++ +    E+  ++   G  PD      V+ +Y +    + A
Sbjct: 644 RFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEA 703

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
             ++SEM++   V     +   ++ Y A   F
Sbjct: 704 SRIFSEMKDSALVPDVVTYNTFIATYAADSMF 735



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 244/525 (46%), Gaps = 44/525 (8%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD------------------------- 83
           G+  D Y Y+ LI  +   G +  A++   +M+QD                         
Sbjct: 188 GVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSN 247

Query: 84  -----------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                       V+ DL  Y+ LI   R+ S Y +A+ +F ++K  G  PD V YN +++
Sbjct: 248 VTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLD 307

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           VFGK++  +EA  +++EM   G  P +V+Y++L++ Y +     EAL +  +M       
Sbjct: 308 VFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKP 367

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   ++  + +      A ++F  MR +G  P++ ++N L++++G    F E + +F
Sbjct: 368 DVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVF 427

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++      ++VT+NT++ ++G++    + + + +EM+  G      T++T+I+ + + 
Sbjct: 428 DDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRC 487

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G  D+A  +++ +  +GV  D   Y  ++ A  R GL   ++++L E+      P E + 
Sbjct: 488 GSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSY 547

Query: 373 TILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV---FEKM 426
           + L  A   G+  E    F +   +G V+  +V   +  L   N K   +IE    F ++
Sbjct: 548 SSLLHAYANGKEIERMNAFAEEIYSGSVETHAVL--LKTLVLVNSKSDLLIETERAFLEL 605

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           R  G  PD   +  +L+ YG+ +    A ++ + M E     S   +  ++ +Y   ++F
Sbjct: 606 RRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENF 665

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              E +   +        +  ++ V   Y R  R+ +ASRI + M
Sbjct: 666 QKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 247/524 (47%), Gaps = 19/524 (3%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTL---ITCFGKEGMFDSAISWLQQMEQDRVSGD 88
           + + +LA  +F  +R      + ++ S +   I   GK G   SA S L  ++ D V  D
Sbjct: 133 SNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHID 192

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-FKEARLLI 147
           +  Y+ LI        Y  A+++F++++  G  P L+ YN ++NV+GK  + +     L+
Sbjct: 193 VYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALV 252

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           E MR +GV PD  +Y+TL++       + EA+ +F +M       D  T N ++DV+G+ 
Sbjct: 253 EAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKS 312

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
              ++A ++   M   G  P+ V+YN+L+  Y +  L  EA+ L   M  K I+ +V TY
Sbjct: 313 RRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTY 372

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
            T++  + K+ + + A  +  EM+  G +PN  T++ +I + G  GK      +F  ++ 
Sbjct: 373 TTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKL 432

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEE 383
                D V + T++  + + G+ +    +  E+++   +       T I+  +R G  ++
Sbjct: 433 CNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQ 492

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  V++   +AG V D+S +  ++   +R   +    +V  +M      P+    + +L+
Sbjct: 493 AMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLH 552

Query: 444 SYGKLREFET----ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM-LESLFERLDS 498
           +Y   +E E     A+++YS     G V +  V  + L L  ++ D  +  E  F  L  
Sbjct: 553 AYANGKEIERMNAFAEEIYS-----GSVETHAVLLKTLVLVNSKSDLLIETERAFLELRR 607

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
                     + +  IY R   +  A  I+N M++ R F  SL 
Sbjct: 608 RGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETR-FTPSLT 650



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/497 (21%), Positives = 223/497 (44%), Gaps = 5/497 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P    YN +L    ++++ + A  +  EM   G +P   TY++LI+ + K G+ + A+
Sbjct: 295 FTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEAL 354

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               QM    +  D+  Y+ L+    K      AI +F  +++ G  P++  +N +I + 
Sbjct: 355 DLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMH 414

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G    F E   + ++++     PD V+++TLL ++ +N    +   +F EM       + 
Sbjct: 415 GNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAER 474

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  Y +      A  ++ SM + G+ P + +YN +L       L+ ++  +   
Sbjct: 475 DTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAE 534

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+    + N ++Y++++  Y    E E+     +E+ +  +E +A+   T++ +  K+  
Sbjct: 535 MEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDL 594

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL---HELR-QPNTIPRET 370
           L      F +LR  G+  D      M+  Y R  +VA A  +L   HE R  P+     +
Sbjct: 595 LIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNS 654

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            + + +R+   +++  + R+  + G   D   +  +I  + RN +      +F +M+ + 
Sbjct: 655 LMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA 714

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD       + +Y     F  A D+   M ++GC      +  ++  Y      +   
Sbjct: 715 LVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEAN 774

Query: 491 SLFERLDS-DSNINKKE 506
           S  + L + D +++K+E
Sbjct: 775 SFVKNLSNLDPHVSKEE 791



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA   P +  YN VL  + R   WE +  +  EM      P+  +YS+L+  +      +
Sbjct: 502 EAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIE 561

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              ++ +++    V    VL   L+ +  K     +    F  L+  GI PD+   N M+
Sbjct: 562 RMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAML 621

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +++G+ ++  +A  ++  M E    P   +Y++L+ +Y  +  F ++  +  E+ E    
Sbjct: 622 SIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMK 681

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  + N +I  Y +    K+A R+F  M+   + P VV+YNT +  Y    +F EAI +
Sbjct: 682 PDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDV 741

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            R M ++  + +  TYN+++  Y K  +  +A + ++ + N
Sbjct: 742 VRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSN 782


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 217/461 (47%), Gaps = 5/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+  +P+V  Y+ V+    R  + + A+ LF +M + G  P+  TY+TL++   + G+ 
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L +M +  +  D   Y  L+    K      A+ +F    +    PD+VAY+T+
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    K     EA  L E+MRE   +PD V+++ L++   +  +  EA  V   M + NC
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T + +ID   +    +DA  +F  M   GI+P+VV+YN+L+  +        A+ 
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M       +++TYNT+I    K+    +A  L  +M+ +   P+ ITYS +I  + 
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 368

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K  ++D A  LF  +    V  D V + T++  Y   GLV  A+RLL E+   +  P   
Sbjct: 369 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             T L     + GR+ EA  V ++    G   ++  +  +I+ F R  K     ++ E+M
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ-EEGC 466
              G  P+      ++  +    + E A  +   ++ +E C
Sbjct: 489 VGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENC 529



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 223/453 (49%), Gaps = 4/453 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  + +++  + +A +   A   F +M+++G  P+ +TY+ LI  F K      A   L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++  ++ ++V YS +I    + +    A  +F ++  +G +P+LV YNT+++   + 
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  EA  L++EMRE+G++PD  SY TL+    +  K   AL VF + +  +CP D+   
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I    +     +A +LF  MR+   +P VV++  L+    + +   EA  +   M+ 
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    NV+TY+++I    K+ +   A  + + M  RGIEPN +TY+++I  +     +D 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A +L +++ ++G   D + Y T+I    + G    A RL  +++     P+ I     I 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +  RI+ A  +F        + D+  F  ++E +       +   + E+M ++   P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           D +    +++ + K+     A  +   M + GC
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 458



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 217/458 (47%), Gaps = 6/458 (1%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           N      P V AY+ ++  + +  + + A  LF++MR+    PD  T++ L+    K   
Sbjct: 173 NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 232

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
              A   L+ ME    + +++ YS+LI+   K      A  +F R+   GI P++V YN+
Sbjct: 233 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 292

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+ F        A LL+EEM   G  PD ++Y+TL++   +  +  EA  +F +M    
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ T + +I  + +L+    A  LF  M K  + P VV+++TL+  Y  A L  +A 
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M   +   +V TY +++  + K     +A  +++ M  RG +PN +TY+ +I  +
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPR 368
            +AGK   A  L +++  +GV+ + + Y+++I  +   G +  A+++L  L R  N    
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532

Query: 369 ETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
             A  +    L R GR+  A  +      +G      ++  +I    + K+    +EV E
Sbjct: 533 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 592

Query: 425 KMR-SAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +M  S    P++     V+    +    E A+ L  E+
Sbjct: 593 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 230/490 (46%), Gaps = 4/490 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YNV++    +  +   A+ L  EM++ G+AP+  TYST+I  F ++   D+A   
Sbjct: 40  PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +QM ++    +LV Y+ L+    +     +A  +   ++  G+ PD  +Y+T++    K
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  + E+       PD V+YSTL+    +  +  EA  +F +M E +C  D+ T
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++D   + D  ++A ++  +M      P+V++Y++L+    +     +A  +F+ M 
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + IE NVVTYN++I  +  +   + A  LM+EM   G  P+ ITY+T+I    K G+  
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQ---PNTIPRETAI 372
            A  LF  +++     D + Y  +I  + ++  +  A+ L  + L+Q   P+ +   T +
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                AG +++A  +  +   +    D+  +  +++ F +  +      V ++M   G  
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 459

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+      +++++ +  +   A  L  EM   G   +   +  ++  +    D      +
Sbjct: 460 PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519

Query: 493 FERLDSDSNI 502
            ERL+ D N 
Sbjct: 520 LERLERDENC 529



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 127/276 (46%), Gaps = 4/276 (1%)

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T  IMID   + +   +A   F  M+K G  P+  +YN L+  + +      A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L + M+   +  NVVTY+T+I  + +  + + A  L ++M   G  PN +TY+T+++  
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            + G +D A  L  ++R  G++ D   Y T++    + G +  A ++  +       P+ 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I  L + GR++EA  +F +  +     D+  F  +++   +  +     +V E 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           M      P+    + +++   K  +   A +++  M
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 55/117 (47%)

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           + N I     I  L +A R+ EAT  F +    G V +   +  +I  F +  K      
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           + ++M+ +G  P+    + V++ + +  + +TA  L+ +M E GC+ +   +  +LS
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120


>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
 gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 43/523 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++    RA QW  A  L D+M +  IAP R TY+ LI   G  G +  A+  
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M  + V  DLV ++ ++   +    YSKA+S F  +K + + PD   +N +I    K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295

Query: 137 AKLFKEARLLIEEMRE-------------------------------------QGVKPDT 159
                +A  L   MRE                                     +G+KP+ 
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           VSY+ L+  Y  +     ALSV  ++ +     D+ +   +++ YG+      A  +F  
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRK    P+VV+YN L+  YG      EA+ +FR M++  I+ NVV+  T++    +S +
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                 ++   Q+RGI  N   Y++ I  +  A +L++A  L+Q +R   V+ D V +  
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP--RETAITIL---ARAGRIEEATWVFRQAFDA 394
           +I    R+     A   L E+ +  +IP  +E   ++L   ++ G++ EA  +F Q   A
Sbjct: 536 LISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+  +  M+  ++ ++K+    E+F +M + G  PDS   + ++ ++ K  +    
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             L   M+E+   F+  V F++ S     +++     L + +D
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 229/501 (45%), Gaps = 16/501 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           + A   P V  +  ++       + E    +F+ M   G+ P+  +Y+ L+  +   GM 
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A+S L  ++Q+ +  D+V Y+ L+    +     KA  +F  ++     P++V YN +
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ +G      EA  +  +M + G+KP+ VS  TLL     + K V   +V +       
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            L+    N  I  Y      + A  L+ SMRK  +    V++  L+        + EAI 
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   I      Y++++  Y K  +  +A ++  +M+  G EP+ I Y++++  + 
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            + K  +A  LF ++ ++G+E D +    ++ A+ + G  ++   L+  +R+   IP   
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE-KEIPFTG 670

Query: 371 AI--TILARAGRIEEATWVFRQAFDAGEVKD-------ISVFGCMIELFSRNKKYANVIE 421
           A+   I +    ++E    +++A D  ++ D       I +   M+ LF ++ K   +++
Sbjct: 671 AVFFEIFSACNTLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +F K+ ++G   +    A++L     +  +    ++   M   G   S+Q++  ++S +G
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-FG 785

Query: 482 ARKDFNMLESLF-ERLDSDSN 501
            R      E L  ++L+S  N
Sbjct: 786 ERSAGIEFEPLIRQKLESLRN 806



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 126/297 (42%), Gaps = 31/297 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+MI ++ + +    A  LF+ M+K    P   +Y+ L+  +G A  +  A++L   M R
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  +  TYN +I   G S    +A  + ++M + G+ P+ +T++ +++ +    +  +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A   F+ ++ + V  D   +  +I    ++G  + A  L + +R+     R         
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR--------- 317

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
                                D+  F  ++ L+S   +  N   VFE M + G  P+   
Sbjct: 318 --------------------PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLF 493
              ++ +Y       TA  +  ++++ G +  D V +  +L+ YG  +     + +F
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTCLLNSYGRSRQPGKAKEVF 413


>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 821

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/607 (25%), Positives = 278/607 (45%), Gaps = 84/607 (13%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W N++  +  +V  YN++LR++ RA+QW     L++EM  RGIA    TY TL
Sbjct: 130 RALEIFEWFNKKG-HELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTL 188

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  + K G  D A+SWL  M    V  D V    +++L +K  ++ K    F +  S   
Sbjct: 189 IDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFFRKWSSGKP 248

Query: 121 V----------------PDL---VA----------YNTMINVFGKAKLFKEARLLIEEMR 151
           +                P+L   VA          YNT+I+ +GKA   KEA     EM 
Sbjct: 249 LRSKSKPLRSNDNVVASPELDERVACANASFGSHTYNTLIDTYGKAGQLKEASQTFVEML 308

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFA-EMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           +QGV P TV+++T++N+   NH  +E +S+   +M E+ C  +  T NI+I ++ + D  
Sbjct: 309 KQGVAPTTVTFNTMINI-CGNHGRLEEVSLLVRKMEELRCSPNTRTYNILISLHAKHDDI 367

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
             A + F +M++  ++P +VSY TLL  Y   ++  EA  L + M ++ +E +  T + +
Sbjct: 368 GMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKEMDKRRLEIDQYTQSAL 427

Query: 271 IKIY-------------------------------------GKSLEHEKATNLMQEMQNR 293
            ++Y                                     G +LE EK     Q+ +N 
Sbjct: 428 TRMYIEAGMLDRSLLWFLRFHVAGNMTSECYAANIDAYGEHGHTLEAEKVFIWCQKQKNL 487

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            +    + ++ +I  +G     ++A  LF  +   GV  D   Y ++I           A
Sbjct: 488 SV----LEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIA 543

Query: 354 KRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           K  L ++++     + IP    I+  A+ G++E    ++R+    G   D+ V G +I +
Sbjct: 544 KPYLKKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINV 603

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ--EEG-C 466
           FS   +    I   ++M+ AG   ++ I   ++  Y K+   E A + Y  +Q  +EG  
Sbjct: 604 FSDAGRVKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAKEAYKLLQLSDEGPG 663

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
           V+S      M+ LY  R   +  + +FE L  +   N+     ++  +Y++  R ++A +
Sbjct: 664 VYSSNC---MIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMMLC-LYKKIERFDEAIQ 719

Query: 527 IMNRMNK 533
           I  ++ K
Sbjct: 720 IAKQIRK 726



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/495 (21%), Positives = 202/495 (40%), Gaps = 66/495 (13%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + +A+ IF      G   +++ YN M+   G+A+ ++    L  EM  +G+     +Y T
Sbjct: 128 WDRALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGT 187

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--WSMRK 222
           L+++Y +  +  +ALS    M       D  T  I++ +Y +    +  +  F  WS  K
Sbjct: 188 LIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFFRKWSSGK 247

Query: 223 --------MGIDPSVV-------------------SYNTLLRVYGEAELFGEAIHLFRLM 255
                   +  + +VV                   +YNTL+  YG+A    EA   F  M
Sbjct: 248 PLRSKSKPLRSNDNVVASPELDERVACANASFGSHTYNTLIDTYGKAGQLKEASQTFVEM 307

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ +    VT+NTMI I G     E+ + L+++M+     PN  TY+ +I++  K   +
Sbjct: 308 LKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKMEELRCSPNTRTYNILISLHAKHDDI 367

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A   F+ ++ + +E D V Y+T++ AY    ++  A+ L+ E+ +      +   + L
Sbjct: 368 GMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKEMDKRRLEIDQYTQSAL 427

Query: 376 AR----AGRIEEA-TWVFR-----------------------QAFDAGEV-------KDI 400
            R    AG ++ +  W  R                          +A +V       K++
Sbjct: 428 TRMYIEAGMLDRSLLWFLRFHVAGNMTSECYAANIDAYGEHGHTLEAEKVFIWCQKQKNL 487

Query: 401 SV--FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           SV  F  MI+ +   K Y    ++F+ M   G   D      +++      +   A    
Sbjct: 488 SVLEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIAKPYL 547

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
            +MQE G V     +  ++S +       M E ++  +          +H ++  ++  A
Sbjct: 548 KKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINVFSDA 607

Query: 519 NRLNDASRIMNRMNK 533
            R+ +A   ++ M K
Sbjct: 608 GRVKEAIGYVDEMKK 622



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 33/286 (11%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV  +NV+++     K +E A  LFD M + G+  DR +Y++LI           A  +L
Sbjct: 488 SVLEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIAKPYL 547

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++  +  D + Y  +I    KL        I+  +   G+ PD++ +  +INVF  A
Sbjct: 548 KKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINVFSDA 607

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA   ++EM++ G+  +TV Y++L+ LY +     +A   +  +   +    + + 
Sbjct: 608 GRVKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAKEAYKLLQLSDEGPGVYSS 667

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMG-------------------IDPSV--------- 229
           N MID+Y +  M   A  +F +++K G                    D ++         
Sbjct: 668 NCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMMLCLYKKIERFDEAIQIAKQIRKL 727

Query: 230 -----VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                +SYN +L +Y  A    EAI  F+ M R  I+ N  +  ++
Sbjct: 728 GPLTDLSYNNVLDLYAIAGRPKEAIETFKEMVRASIQVNDCSLRSL 773



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 60/322 (18%)

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
           E  ++  AL +F   N+    L++   NIM+   G+    +  + L+  M   GI  +  
Sbjct: 124 EQLRWDRALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCS 183

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ-- 288
           +Y TL+ VY +     +A+    +M  + ++ + VT   ++++Y K+ E +K     +  
Sbjct: 184 TYGTLIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFFRKW 243

Query: 289 -----------------------EMQNRGIEPNAI----TYSTIIAIWGKAGKLDRAAML 321
                                  E+  R    NA     TY+T+I  +GKAG+L  A+  
Sbjct: 244 SSGKPLRSKSKPLRSNDNVVASPELDERVACANASFGSHTYNTLIDTYGKAGQLKEASQT 303

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
           F ++   GV                                P T+   T I I    GR+
Sbjct: 304 FVEMLKQGV-------------------------------APTTVTFNTMINICGNHGRL 332

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           EE + + R+  +     +   +  +I L +++       + FE M+ A   PD      +
Sbjct: 333 EEVSLLVRKMEELRCSPNTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTL 392

Query: 442 LNSYGKLREFETADDLYSEMQE 463
           L +Y   +    A++L  EM +
Sbjct: 393 LYAYSIRKMIREAEELVKEMDK 414



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/213 (19%), Positives = 90/213 (42%), Gaps = 10/213 (4%)

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           I  + L  ++A  + +    +G E N I Y+ ++   G+A +  R   L+ ++ + G+  
Sbjct: 121 ILKEQLRWDRALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAA 180

Query: 333 DPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
               Y T+I  Y + G     ++    +L +  QP+ +     + +  +AG  ++    F
Sbjct: 181 TCSTYGTLIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFF 240

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           R+      ++  S      +    N       E+ E++  A     SH    ++++YGK 
Sbjct: 241 RKWSSGKPLRSKS------KPLRSNDNVVASPELDERVACANASFGSHTYNTLIDTYGKA 294

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            + + A   + EM ++G   +      M+++ G
Sbjct: 295 GQLKEASQTFVEMLKQGVAPTTVTFNTMINICG 327


>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
 gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
          Length = 866

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 246/517 (47%), Gaps = 8/517 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS+ +   +  +    P+   Y +++  + R    E    +F+EM   G++   ++Y+ L
Sbjct: 125 RSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTAL 184

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-ELARKLSDYSKAISIFSRLKSSG 119
           I  +G+ G ++ ++  L++M+++RVS  ++ Y+ +I   AR   D+   + +F+ ++  G
Sbjct: 185 INSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEG 244

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD+V YNT++       L  EA ++   M E GV PD  +Y+ L++ + + ++  +  
Sbjct: 245 IQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVS 304

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       ++++ N++++ Y ++   +DA  +F  M++ G  P+  +Y+ LL +Y
Sbjct: 305 ELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLY 364

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+   + E   LF  M+    E +  TYNT+I ++G+    ++   L  +M    +EPN 
Sbjct: 365 GKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNM 424

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY  +I   GK G  D A  +   +   G+      Y  +I AY +  +   A   L+ 
Sbjct: 425 ETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNT 484

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +  + P      T I + AR G  +E   +  +  D G  ++   F  +IE F +  +
Sbjct: 485 MNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQ 544

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   I+ + +M  +   PD   +  VL+ Y      + + + + E++  G + +   +  
Sbjct: 545 FEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCM 604

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           ML++Y     +N     +E LD         +H V+ 
Sbjct: 605 MLAVYAKSDRWN---EAYELLDEMLTNRASNIHQVIG 638



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 229/471 (48%), Gaps = 7/471 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S+ +L+ + +E R SPS+  YN V+ +  R    WE   GLF EMR  GI PD  TY+TL
Sbjct: 197 SLELLERMKKE-RVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 255

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +      G+ D A    + M +  V  D+  Y+ L++   KL+   K   +   + S+G 
Sbjct: 256 LCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGN 315

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP++ +YN ++  + +    ++A  +   M+E G  P+  +YS LL LY ++ ++ E   
Sbjct: 316 VPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRE 375

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM   N   D  T N +IDV+G+    K+   LF  M +  ++P++ +Y  L+   G
Sbjct: 376 LFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACG 435

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +  L  +A  +   M  K +  +   Y  +I+ YG++  +E+A   +  M   G +P   
Sbjct: 436 KGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIE 495

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I ++ + G       +  K+   GV  +   +  +I  + + G    A +   E+
Sbjct: 496 TYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEM 555

Query: 361 RQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +   +P     E  +++   AG ++E+   F++   +G + ++  +  M+ +++++ ++
Sbjct: 556 EKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRW 615

Query: 417 ANVIEVFEKMRSAGYFPDSHIIA-LVLNSYGKLREFETADDLYSEMQEEGC 466
               E+ ++M +        +I  ++   +     ++  + ++ ++  EGC
Sbjct: 616 NEAYELLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGC 666



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/516 (19%), Positives = 209/516 (40%), Gaps = 68/516 (13%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + +V +   +   W+ +  LF  M RQ    P+ + Y+ +I+  G+EG+ +         
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLE--------- 160

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
                               K SD      IF  + + G+   + +Y  +IN +G+   +
Sbjct: 161 --------------------KCSD------IFEEMGAHGVSRSVFSYTALINSYGRNGKY 194

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL-SVFAEMNEVNCPLDLTTCNI 199
           + +  L+E M+++ V P  ++Y+T++N         E L  +FAEM       D+ T N 
Sbjct: 195 EVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 254

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++       +  +A+ +F +M + G+ P + +Y  L+  +G+     +   L + M    
Sbjct: 255 LLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTG 314

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
               + +YN +++ Y +    E AT + + MQ  G  PNA TYS ++ ++GK G+ D   
Sbjct: 315 NVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVR 374

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            LF +++ S  E D   Y T+I  +   G       L H++ + N  P            
Sbjct: 375 ELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNM---------- 424

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                           E  +  +F C      +   + +  ++   M   G  P S    
Sbjct: 425 ----------------ETYEGLIFAC-----GKGGLHDDAKKILLHMSEKGMIPSSKAYT 463

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
            V+ +YG+   +E A    + M E G   + + +  ++ ++     +   E++  ++   
Sbjct: 464 GVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDF 523

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
               +++  + V   + +  +  +A +    M K R
Sbjct: 524 GVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSR 559



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 1/358 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P+   Y+++L    +  +++    LF EM+     PD  TY+TLI  FG+ G F
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYF 405

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              ++    M ++ V  ++  Y  LI    K   +  A  I   +   G++P   AY  +
Sbjct: 406 KEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGV 465

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G+A +++EA + +  M E G KP   +Y+TL+ ++     + E  ++  +M +   
Sbjct: 466 IEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGV 525

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  + N +I+ + Q    ++A + +  M K  + P   +   +L VY  A L  E++ 
Sbjct: 526 ARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVE 585

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIW 309
            F+ ++   I  NV+ Y  M+ +Y KS    +A  L+ EM  NR    + +    I   +
Sbjct: 586 QFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVIGQMIKGDF 645

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
                      +F KL S G  +    Y T++ A   +G    A R+L E  +    P
Sbjct: 646 DDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEATKRGHFP 703


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 235/478 (49%), Gaps = 40/478 (8%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  Q ELA  +F+     G     Y +S LI+ +G+ G  D AI   + M+   +  +LV
Sbjct: 197 RLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLV 256

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ +I+   K   D+++A  IF  +  +G+ PD + +N+++ V G+  L++ AR L  E
Sbjct: 257 TYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSE 316

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M  +G++ D  +Y+TLL+   +  +   A  + +EM   +   ++ T + +ID Y +   
Sbjct: 317 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGR 376

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +A  LF  M+   I    VSYNTLL +Y +   F EA+++ + M+   I+++ VTYN 
Sbjct: 377 LDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNA 436

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK  ++E+   + +EM+   I PN +TYST+I ++ K G    A  +F++ + +G
Sbjct: 437 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 496

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE--- 382
           ++ D VLY  +I A  + GLV  A   L E+ +    PN +   + I    R+G  E   
Sbjct: 497 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVI 556

Query: 383 -------------EATWVFRQAFDAGEVKD------ISVFGCMIELFSRNKKYAN----- 418
                         +  V   A ++ EV D      I +FG +    + + K  N     
Sbjct: 557 DPPYETNVSKMSSSSLKVVEDATES-EVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQE 615

Query: 419 ---VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
              ++ VF KM      P+    + +LN+  +   FE A  L  E++    +F +QV+
Sbjct: 616 ILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY 669



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 202/417 (48%), Gaps = 11/417 (2%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQ---QMEQDRVSGDLVLYSNLIELARKLSD 104
           R    D YT+  L+   G  G +  AI   +   + EQ R +    L S +I +  +L  
Sbjct: 144 RLCGSDDYTF--LLRELGNRGEWAKAIRCFEFAVRREQRR-NEQGKLASAMISILGRLGQ 200

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              A ++F    + G    + A++ +I+ +G++    EA  + E M+  G+KP+ V+Y+ 
Sbjct: 201 VELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNA 260

Query: 165 LLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           +++   +    F  A  +F EM       D  T N ++ V G+  + + A  LF  M   
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR 320

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI+  + +YNTLL    +      A  +   M RK I  NVVTY+T+I  Y K+   ++A
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 380

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL  EM+   I  + ++Y+T+++I+ K G+ + A  + +++ SSG++ D V Y  ++  
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 440

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y + G     KR+  E++     PN +   T I + ++ G  +EA  VFR+   AG   D
Sbjct: 441 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKAD 500

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + ++  +I+   +N    + +   ++M   G  P+      +++++G+    E   D
Sbjct: 501 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI + G+L   + A  +F +    G   +V +++ L+  YG +    EAI +F  M+   
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250

Query: 260 IEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           ++ N+VTYN +I   GK  ++  +A  +  EM   G++P+ IT+++++A+ G+ G  + A
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF ++   G+E D   Y T++ A  + G +  A +++ E+ +    PN +   T I  
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+AGR++EA  +F +   A    D   +  ++ ++++  ++   + V ++M S+G   D
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEE 464
           +     +L  YGK  ++E    ++ EM+ E
Sbjct: 431 AVTYNALLGGYGKQGKYEEVKRVFEEMKAE 460



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 13/343 (3%)

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT- 266
           D   D+  L +  R  G D     Y  LLR  G    + +AI  F    R+E  +N    
Sbjct: 131 DKGIDSVLLNFESRLCGSD----DYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGK 186

Query: 267 -YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
             + MI I G+  + E A N+ +   N G       +S +I+ +G++G  D A  +F+ +
Sbjct: 187 LASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETM 246

Query: 326 RSSGVEIDPVLYQTMIVAYERVGL-VAHAKRLLHELR----QPNTIPRETAITILARAGR 380
           +SSG++ + V Y  +I A  + G+    A  +  E+     QP+ I   + + +  R G 
Sbjct: 247 KSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGL 306

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
            E A  +F +    G  +DI  +  +++   +  +     ++  +M      P+    + 
Sbjct: 307 WEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYST 366

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           V++ Y K    + A +L++EM+          +  +LS+Y     F    ++ + ++S S
Sbjct: 367 VIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES-S 425

Query: 501 NINKKEL-HHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            I K  + ++ + G Y +  +  +  R+   M   R F + L 
Sbjct: 426 GIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLT 468



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 36/246 (14%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +L    +  ++E    +F+EM+   I P+  TYSTLI  + K G++  A+   ++ +
Sbjct: 434 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFK 493

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+VLYS LI+   K      A+S    +   GI P++V YN++I+ FG++    
Sbjct: 494 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRS---G 550

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  +I+   E  V    +S S+L        K VE     A  +EV    D    N +I
Sbjct: 551 SAECVIDPPYETNV--SKMSSSSL--------KVVED----ATESEVGDKED----NQII 592

Query: 202 DVYGQLDM-----AKDADR----------LFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
            ++GQL       AK  +R          +F  M ++ I P+VV+++ +L        F 
Sbjct: 593 KIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 652

Query: 247 EAIHLF 252
           +A  L 
Sbjct: 653 DASMLL 658


>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 683

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 43/523 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++    RA QW  A  L D+M +  IAP R TY+ LI   G  G +  A+  
Sbjct: 44  PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M  + V  DLV ++ ++   +    YSKA+S F  +K + + PD   +N +I    K
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163

Query: 137 AKLFKEARLLIEEMRE-------------------------------------QGVKPDT 159
                +A  L   MRE                                     +G+KP+ 
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           VSY+ L+  Y  +     ALSV  ++ +     D+ +   +++ YG+      A  +F  
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRK    P+VV+YN L+  YG      EA+ +FR M++  I+ NVV+  T++    +S +
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                 ++   Q+RGI  N   Y++ I  +  A +L++A  L+Q +R   V+ D V +  
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP--RETAITIL---ARAGRIEEATWVFRQAFDA 394
           +I    R+     A   L E+ +  +IP  +E   ++L   ++ G++ EA  +F Q   A
Sbjct: 404 LISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+  +  M+  ++ ++K+    E+F +M + G  PDS   + ++ ++ K  +    
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             L   M+E+   F+  V F++ S     +++     L + +D
Sbjct: 523 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 565



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 198/448 (44%), Gaps = 8/448 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           +Y+ +I L  + +   +A  +F  ++     PD   Y+ +IN  G+A  ++ A  L+++M
Sbjct: 13  IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
               + P   +Y+ L+N    +  + EAL V  +M +     DL T NI++  Y      
Sbjct: 73  LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYN 268
             A   F  M+   + P   ++N ++    +     +A+ LF  M  +R E   +VVT+ 
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++ +Y    E E    + + M   G++PN ++Y+ ++  +   G    A  +   ++ +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLL----HELRQPNTIPRETAITILARAGRIEEA 384
           G+  D V Y  ++ +Y R      AK +      E R+PN +     I      G + EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +FRQ    G   ++     ++   SR+KK  NV  V    +S G   ++      + S
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR-KDFNMLESLFERLDSDSNIN 503
           Y    E E A  LY  M+++  V +D V F +L     R   +    S  + ++  S   
Sbjct: 373 YINAAELEKAIALYQSMRKKK-VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRM 531
            KE++  V   Y +  ++ +A  I N+M
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQM 459



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 110/496 (22%), Positives = 226/496 (45%), Gaps = 19/496 (3%)

Query: 1   RSVAILDWIN----EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           +S   LD  N    + A   P V  +  ++       + E    +F+ M   G+ P+  +
Sbjct: 166 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 225

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y+ L+  +   GM  +A+S L  ++Q+ +  D+V Y+ L+    +     KA  +F  ++
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
                P++V YN +I+ +G      EA  +  +M + G+KP+ VS  TLL     + K V
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 345

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
              +V +        L+    N  I  Y      + A  L+ SMRK  +    V++  L+
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                   + EAI   + M+   I      Y++++  Y K  +  +A ++  +M+  G E
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P+ I Y++++  +  + K  +A  LF ++ ++G+E D +    ++ A+ + G  ++   L
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525

Query: 357 LHELRQPNTIPRETAI--TILARAGRIEEATWVFRQAFDAGEVKD-------ISVFGCMI 407
           +  +R+   IP   A+   I +    ++E    +++A D  ++ D       I +   M+
Sbjct: 526 MDLMRE-KEIPFTGAVFFEIFSACNTLQE----WKRAIDLIQMMDPYLPSLSIGLTNQML 580

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            LF ++ K   ++++F K+ ++G   +    A++L     +  +    ++   M   G  
Sbjct: 581 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640

Query: 468 FSDQVHFQMLSLYGAR 483
            S+Q++  ++S +G R
Sbjct: 641 PSNQMYRDIIS-FGER 655



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AYN  + + + A + E A  L+  MR++ +  D  T++ LI+   +   +  AIS+L++M
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E   +     +YS+++    K    ++A SIF+++K +G  PD++AY +M++ +  ++ +
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD------- 193
            +A  L  EM   G++PD+++ S L+  + +  +      +   M E   P         
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + CN + +    +D+ +  D    S+       S+   N +L ++G++      + LF 
Sbjct: 545 FSACNTLQEWKRAIDLIQMMDPYLPSL-------SIGLTNQMLHLFGKSGKVEAMMKLFY 597

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    +  N+ TY  +++         K   +++ M   GI+P+   Y  II+ +G+  
Sbjct: 598 KIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-FGE-- 654

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                       RS+G+E +P++ Q +
Sbjct: 655 ------------RSAGIEFEPLIRQKL 669


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 229/465 (49%), Gaps = 7/465 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V++ NV++  + R    + A  +  +M + GI PD  T++TLI     EG    A+   
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M       +++ Y+ +I    K  +   A+ +F +++ +   P++V YNT+I+   K 
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +L  EA   + EM ++G+ PD V+Y+T+L+ +    +  EA  +F EM   N   D  T 
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI++D   +  M  +A  +  +M + G +P+  +YN L+  Y       EAI +  +M  
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K    N+ +YN +I  Y KS    +A  L+ EM  + + P+ +TYST++    + G+   
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  LF+++ SSG+  D + Y  ++  + + G +  A +LL E+ +    P     TIL R
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 378 ----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
               AG++E A  +F +    G   DI  +  MI+   +        E F KM   G+ P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQML 477
           DS    +++  + + ++  TA  L  EM   G  FS D   FQML
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMV--GKRFSADSSTFQML 592



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 215/445 (48%), Gaps = 38/445 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V +YN V+  + +     +A  +F +M Q    P+  TY+T+I    K+ + + A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L +M    +  D+V Y+ ++     L   ++A  +F  +    ++PD V +N +++  
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K  +  EAR + E M E+G +P+  +Y+ L++ Y  +++  EA+ V   M    C  +L
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           ++ NI+I+ Y +     +A RL   M +  + P  V+Y+TL++   +     EA++LF+ 
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M    +  +++ Y+ ++  + K    ++A  L++EM  R I+PN I Y+ +I     AGK
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L+ A  LF KL + G+  D   Y  MI            K LL E               
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMI------------KGLLKE--------------- 529

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
               G  +EA   FR+  D G + D   +  +I+ F +N+  +  I++ ++M    +  D
Sbjct: 530 ----GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585

Query: 435 SHIIALVLNSYGKLREFETADDLYS 459
           S    ++L       + E+ D++ S
Sbjct: 586 SSTFQMLL-------DLESHDEIIS 603



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 4/418 (0%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P    +   +    K+  + SA+S   QM+   V+ ++   + LI    +LS    A+S+
Sbjct: 94  PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
             ++   GI PD + +NT+IN        KEA  L  EM   G +P+ +SY+T++N   +
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           N   + A+ VF +M +     ++ T N +ID   +  +  +A      M   GI P VV+
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YNT+L  +       EA  LF+ M  + +  + VT+N ++    K     +A  + + M 
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +G EPNA TY+ ++  +    ++D A  +   +   G   +   Y  +I  Y +   + 
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            AKRLL E+ +    P+T+   T +  L + GR  EA  +F++   +G + D+  +  ++
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + F ++      +++ ++M      P+  +  +++       + E A +L+S++  +G
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 168/395 (42%), Gaps = 15/395 (3%)

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN-IMIDV 203
           LL+++  E G+ P   ++ + L L+  +H    A +    + + +C     T N I ID 
Sbjct: 21  LLLQQHMEMGIFPFPPNFPSFL-LFNHHHITTSACTEKPSLPQKHCGFGSNTSNDISID- 78

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
                   DA   F+ M +M   PSVV +   L    + + +  A+ L   M    +  N
Sbjct: 79  --------DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHN 130

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V + N +I    +    + A ++M +M   GI+P+AIT++T+I      GK+  A  LF 
Sbjct: 131 VYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG 379
           ++  SG E + + Y T+I    + G    A R+  ++ Q    PN +   T I  L +  
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR 250

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
            + EA     +  D G   D+  +  ++  F    +      +F++M      PD+    
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           ++++   K      A  +   M E+G   +   +  ++  Y      +    +   +   
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                   ++++   Y ++ R+N+A R+++ M+++
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 42/182 (23%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E R  P++  Y +++R +  A + E+A  LF ++   GI PD +TY+ +I    KEG+ 
Sbjct: 473 HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLS 532

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  + ++ME D                                   G +PD  +YN +
Sbjct: 533 DEAYEFFRKMEDD-----------------------------------GFLPDSCSYNVI 557

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-----KFVEALSVFAEM 185
           I  F + +    A  LI+EM  +    D+ ++  LL+L  E+H     +F+   S   +M
Sbjct: 558 IQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL--ESHDEIISRFMRGSSQHTKM 615

Query: 186 NE 187
           N+
Sbjct: 616 ND 617


>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 185/331 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  +R    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   +++SG+ PD   YN MI+ FGK
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A     +MRE+G++PD V+++TL++ + +  +   A  +F EM E NCP   TT
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +  +  + +   M++ G+ P++++Y TL+ VYG +  + EAI     M+
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVV 596

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q +R +G+  D + Y T++ A  RV
Sbjct: 597 EAFSVLQFMRENGLRPDVITYTTLMKALIRV 627



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 203/457 (44%), Gaps = 32/457 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVA 280

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   +++    A  +   +   G+ PD   Y+ +
Sbjct: 281 EAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLL 340

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM     
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      A  
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  ++         
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA-------- 572

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                                 D  EV  I V   +I  F  +++      V + MR  G
Sbjct: 573 ----------------------DGLEVS-ILVLNSLINAFGEDRRVVEAFSVLQFMRENG 609

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             PD      ++ +  ++ +F+    +Y EM   GC 
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/428 (19%), Positives = 178/428 (41%), Gaps = 35/428 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + S L+    +PDL +Y+ ++      +   +A LL   + ++RE  ++PD   +S L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y        A  +   M +  +  +  TY+ ++  Y ++   E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++++SGV  D   Y  MI  +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA    +++R+    P                               D+  + 
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEP-------------------------------DVVTWN 443

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++    E+FE+MR +   P +    +++N  G+   +E  + + SEM+E+
Sbjct: 444 TLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQ 503

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G V +   +  ++ +YG    +       E + +D       ++H +   Y +    + A
Sbjct: 504 GLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563

Query: 525 SRIMNRMN 532
             ++  M 
Sbjct: 564 LNVVKAMK 571



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML---FQKLRSSGVEIDPVLYQTMIV 342
           L+  ++     P+  +YS ++A          AA+L      LR S +E D  L+  +I 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      AGR+ EA  +F + F AGE+K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + R     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R D+    ++   + +      +  ++V+   + +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    N+M +
Sbjct: 417 YNCLGHAMDAFNKMRE 432


>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 266/580 (45%), Gaps = 57/580 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W+ ++  Y  +V  YN++LR + +A++W     L+DEM  RGI P   TY TL
Sbjct: 178 RALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTL 237

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-SSG 119
           I  + K G+ + A+ WL +M +  +  D V    +++  +K  ++ KA   F      S 
Sbjct: 238 IDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESA 297

Query: 120 IVPDLV----AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
             P +      YNT+I+ +GKA   +EA      M  +G+ P+TV+++T++++   + + 
Sbjct: 298 SQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQL 357

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EA S+  +M E+ CP D  T NI+I ++ + +    A   F  M++  ++P +VSY TL
Sbjct: 358 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTL 417

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY--------------------- 274
           L  +    L GEA  L   M  + +E +  T + + ++Y                     
Sbjct: 418 LYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGN 477

Query: 275 ----------------GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
                           G  LE EKA    +E +   +    + ++ +I  +G + + ++A
Sbjct: 478 MSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSV----LEFNVMIKAYGISNRYEKA 533

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             L   + + GV  D   Y ++I       L   AK  L ++++     + IP    I+ 
Sbjct: 534 CQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISS 593

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             + G++E A  +F++        D+ V+G +I  F+        +     +R+AG   +
Sbjct: 594 FIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMN 653

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQ--EEGC-VFSDQVHFQMLSLYGARKDFNMLES 491
           + I   ++  Y K+   E A + Y  +Q  E G  V+S      M+ LY  R      E 
Sbjct: 654 AVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNC---MIDLYSERSMVKQAEE 710

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +FE L    + N+     ++  +Y+R  +L +A +I+ +M
Sbjct: 711 IFESLKRKGDANEFSFAMMLC-MYKRIGKLKEAFQIVQKM 749



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 233/479 (48%), Gaps = 19/479 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + YN ++    +A Q   A   F  M + GI P+  T++T+I   G  G  + A S +
Sbjct: 305 SSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLM 364

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q+ME+ R   D   Y+ LI L  K ++  +A S F ++K + + PDLV+Y T++  F   
Sbjct: 365 QKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIR 424

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTT 196
            L  EA +L+ EM E+G++ D  + S L  +Y+E     ++   F   + E N   +  +
Sbjct: 425 HLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYS 484

Query: 197 CNIMIDVYGQLDMAKDADRLFWSM---RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N  ID YG+     +A++ F      RK+    SV+ +N +++ YG +  + +A  L  
Sbjct: 485 AN--IDAYGERGHILEAEKAFLCCKESRKL----SVLEFNVMIKAYGISNRYEKACQLID 538

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  +  +YN++I+I   +    KA   + +MQ   +  + I Y  +I+ + K G
Sbjct: 539 SMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLG 598

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRE 369
           +L+ A  LF+++    V+ D V+Y  +I A+  VG V  A   ++ LR      N +   
Sbjct: 599 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 658

Query: 370 TAITILARAGRIEEATWVFR--QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           + I +  + G +EEA   ++  QA + G   D+    CMI+L+S         E+FE ++
Sbjct: 659 SLIKLYTKVGYLEEAQEAYKMLQASEVG--PDVYSSNCMIDLYSERSMVKQAEEIFESLK 716

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
             G   +    A++L  Y ++ + + A  +  +M+E G V     +  +L  Y     F
Sbjct: 717 RKGD-ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRF 774



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV  +NV+++    + ++E A  L D M   G+ PD+++Y++LI       +   A  +L
Sbjct: 513 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 572

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M++ ++  D + Y  +I    KL     A  +F  +    + PD+V Y  +IN F   
Sbjct: 573 MKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADV 632

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA   +  +R  G+  + V Y++L+ LY +     EA   +  +       D+ + 
Sbjct: 633 GNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSS 692

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M K A+ +F S+++ G D +  S+  +L +Y       EA  + + M+ 
Sbjct: 693 NCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRE 751

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +  ++++YN ++  Y      + A    +EM    I+P+  T+ ++  +  K G
Sbjct: 752 LGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 807



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E +       Y  V+ + ++  Q E+A GLF EM    + PD   Y  LI  F   G  
Sbjct: 576 QETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNV 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++++  +    +  + V+Y++LI+L  K+    +A   +  L++S + PD+ + N M
Sbjct: 636 REAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+++ +  + K+A  + E ++ +G   +  S++ +L +Y    K  EA  +  +M E+  
Sbjct: 696 IDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGL 754

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL + N ++  Y      KDA   F  M +  I P   ++ +L  V  +  +  +A+ 
Sbjct: 755 VTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVG 814

Query: 251 LFRLMQRKEIEQNVVTYNTMI 271
              + ++K+ +  +  + +++
Sbjct: 815 KLEMTRKKDPQSGLQAWASIL 835



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/256 (19%), Positives = 103/256 (40%), Gaps = 27/256 (10%)

Query: 281 EKATNLMQEMQNRGI-EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           E+A  + + ++ +G  E N I Y+ ++ I GKA K      L+ ++ S G+      Y T
Sbjct: 177 ERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGT 236

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           +I  Y + GL   A   L  + +    P E  + ++ +  +             AGE K 
Sbjct: 237 LIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYK------------KAGEFKK 284

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              F     L S ++ +  +               S+    ++++YGK  +   A D ++
Sbjct: 285 AEQFFKNWSLESASQPHVCL--------------SSYTYNTLIDTYGKAGQLREASDTFA 330

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            M  EG + +      M+ + G         SL ++++          ++++  ++ + N
Sbjct: 331 WMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHN 390

Query: 520 RLNDASRIMNRMNKRR 535
            ++ A+    +M + R
Sbjct: 391 NIDRAASYFKKMKEAR 406



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/156 (18%), Positives = 75/156 (48%), Gaps = 1/156 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P V++ N ++         + A  +F+ ++++G A + ++++ ++  + + G    A  
Sbjct: 686 GPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDA-NEFSFAMMLCMYKRIGKLKEAFQ 744

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +Q+M +  +  DL+ Y+N++        +  A+  F  +  + I PD   + ++  V  
Sbjct: 745 IVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLV 804

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           K  + K+A   +E  R++  +    +++++L   VE
Sbjct: 805 KCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVE 840


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 185/331 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  +R    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   +++SG+ PD   YN MI+ FGK
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A     +MRE+G++PD V+++TL++ + +  +   A  +F EM E NCP   TT
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +  +  + +   M++ G+ P++++Y TL+ VYG +  + EAI     M+
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVV 596

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q +R +G+  D + Y T++ A  RV
Sbjct: 597 EAFSVLQFMRENGLRPDVITYTTLMKALIRV 627



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 202/457 (44%), Gaps = 32/457 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVA 280

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   ++     A  +   +   G+ PD   Y+ +
Sbjct: 281 EAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLL 340

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM     
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      A  
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  ++         
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA-------- 572

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                                 D  EV  I V   +I  F  +++      V + MR  G
Sbjct: 573 ----------------------DGLEVS-ILVLNSLINAFGEDRRVVEAFSVLQFMRENG 609

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             PD      ++ +  ++ +F+    +Y EM   GC 
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/428 (19%), Positives = 178/428 (41%), Gaps = 35/428 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + S L+    +PDL +Y+ ++      +   +A LL   + ++RE  ++PD   +S L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y        A  +   M +  +  +  TY+ ++  Y ++   E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++++SGV  D   Y  MI  +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA    +++R+    P                               D+  + 
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEP-------------------------------DVVTWN 443

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++    E+FE+MR +   P +    +++N  G+   +E  + + SEM+E+
Sbjct: 444 TLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQ 503

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G V +   +  ++ +YG    +       E + +D       ++H +   Y +    + A
Sbjct: 504 GLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563

Query: 525 SRIMNRMN 532
             ++  M 
Sbjct: 564 LNVVKAMK 571



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML---FQKLRSSGVEIDPVLYQTMIV 342
           L+  ++     P+  +YS ++A          AA+L      LR S +E D  L+  +I 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      AGR+ EA  +F + F AGE+K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + R     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R D+    ++   + +      +  ++V+   + +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    N+M +
Sbjct: 417 YNCLGHAMDAFNKMRE 432


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 230/464 (49%), Gaps = 5/464 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SPSVF YN+V+  + R    E A  LF+EM+ +G+ PD  TY++LI  +GK GM   
Sbjct: 245 AGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTG 304

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S  ++M+      D++ Y++LI    K     +A      +K  G+ P++V Y+T+I+
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F KA +  EA     +M   G++P+  +Y++L++   +     EA  + +EM +    L
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   ++D   +    ++A+ LF ++ K G   +   Y +L   Y +A++  +A+ + 
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M +K ++ +++ Y T I    +  E E +  +++EM + G+  N+  Y+T+I  + K 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           GK   A  L Q+++  G++I  V Y  +I    ++GLV  A R    +     QPN +  
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIY 604

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I  L +   +EEA  +F +  D G   D  V+  +I+   ++      + +  +M  
Sbjct: 605 TALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
            G   D      ++  + +  + + A  L  EM  +G +  DQV
Sbjct: 665 IGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG-IIPDQV 707



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 194/404 (48%), Gaps = 17/404 (4%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK---A 108
           P    + TL       GM + A     +M + RV   L    +  EL  +LS  SK   A
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRV---LPKVRSCNELLHRLSKSSKGGLA 235

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           +S F  +  +G+ P +  YN +I    +    + AR L EEM+ +G++PD V+Y++L++ 
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +      A+SVF EM +  C  D+ T N +I+ + + +    A      M++ G+ P+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+Y+TL+  + +A +  EA   F  M R  ++ N  TY ++I    K  +  +A  L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EMQ  G+  N +TY+ ++    + G++  A  LF  L  +G  ++  +Y ++   Y +  
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 349 LVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           ++  A  +L E+ + N  P      T I  L R   IE++  V R+  D G   +  ++ 
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +I+ + +  K    + + ++M+  G       I + + +YG L
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLG-------IKITVVTYGVL 572



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/575 (20%), Positives = 245/575 (42%), Gaps = 78/575 (13%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   + R  P V + N +L  + ++ +  LA   F +M   G++P  +TY+ +I C  +E
Sbjct: 205 WKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLARE 264

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G                                   D   A S+F  +K+ G+ PD+V Y
Sbjct: 265 G-----------------------------------DLEAARSLFEEMKAKGLRPDIVTY 289

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N++I+ +GK  +   A  + EEM++ G +PD ++Y++L+N + +  +  +A      M +
Sbjct: 290 NSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ 349

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                ++ T + +ID + +  M  +A++ F  M ++G+ P+  +Y +L+    +     E
Sbjct: 350 RGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNE 409

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMI-------------KIYG--------------KSLEH 280
           A  L   MQ+  +  N+VTY  ++             +++G               SL H
Sbjct: 410 AFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFH 469

Query: 281 --------EKATNLMQEMQNRGIEPNAITYSTIIAIWG--KAGKLDRAAMLFQKLRSSGV 330
                   EKA ++++EM  + ++P+ + Y T   IWG  +  +++ +  + +++   G+
Sbjct: 470 GYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT--KIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
             +  +Y T+I AY +VG    A  LL E++    +   +     I  L + G +++A  
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
            F      G   +I ++  +I+   +N        +F +M   G  PD  +   +++   
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K      A  L + M E G       +  ++  +       + +SL + +     I  + 
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
           L   +   Y     +N+A  + + M +R   + ++
Sbjct: 708 LCICLLRKYYELGDINEALALHDDMARRGLISGTI 742



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 168/363 (46%), Gaps = 4/363 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P    ++T+ NV     + +EAR    +M +  V P   S + LL+   ++ K   ALS 
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M        + T N++I    +    + A  LF  M+  G+ P +V+YN+L+  YG+
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
             +   A+ +F  M+    E +V+TYN++I  + K     +A   +  M+ RG++PN +T
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YST+I  + KAG L  A   F  +   G++ +   Y ++I A  ++G +  A +L  E++
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 362 QP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           Q     N +     +  L   GR+ EA  +F     AG   +  ++  +   + + K   
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +++ E+M      PD  +    +    +  E E +  +  EM + G   +  ++  ++
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 478 SLY 480
             Y
Sbjct: 539 DAY 541



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 4/314 (1%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            +P    + TL N+ V+     EA   F +MN+      + +CN ++    +      A 
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             F  M   G+ PSV +YN ++           A  LF  M+ K +  ++VTYN++I  Y
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           GK      A ++ +EM++ G EP+ ITY+++I  + K  ++ +A      ++  G++ + 
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T+I A+ + G++  A +   ++     QPN     + I    + G + EA  +  +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
              AG   +I  +  +++    + +     E+F  +  AG+  +  I   + + Y K + 
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 451 FETADDLYSEMQEE 464
            E A D+  EM ++
Sbjct: 477 MEKAMDILEEMNKK 490



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 79/445 (17%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y+ ++    +A     A+  F +M + G+ P+ +TY++LI    K G  + A   
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413

Query: 77  LQQMEQDRVSGDLVLYS----NLIELAR-------------------------------K 101
             +M+Q  V+ ++V Y+     L E  R                               K
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                KA+ I   +    + PDL+ Y T I    +    +++  +I EM + G+  ++  
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL++ Y +  K  EA+++  EM ++   + + T  ++ID   ++ + + A R F  M 
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMT 593

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G+ P+++ Y  L+    + +   EA +LF               N M+          
Sbjct: 594 RNGLQPNIMIYTALIDGLCKNDCLEEAKNLF---------------NEML---------- 628

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                     ++GI P+ + Y+++I    K G    A  L  ++   G+E+D   Y ++I
Sbjct: 629 ----------DKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVF----RQAFD 393
             + R G V  AK LL E+ +   IP +     L R     G I EA  +     R+   
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738

Query: 394 AGEVKDISVFGCMIELFSRNKKYAN 418
           +G + DI+V  C+  +   +K  A+
Sbjct: 739 SGTI-DITVPSCLTAVTKLHKLCAS 762


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 225/455 (49%), Gaps = 8/455 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELA-HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           V   N++L+ +  AK+ + A + L   M + G+ PD  +YST++    ++     A+  L
Sbjct: 154 VIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLL 213

Query: 78  QQM--EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             M  +    S ++V Y+ +I    +  + SKA ++F  +   G+VPD+V Y++ I+   
Sbjct: 214 HTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALC 273

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   +A L++ +M   G +PD V+Y+ +++ Y    ++ E   +F EM       D+ 
Sbjct: 274 KARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIF 333

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TCN  +    +   +K+A   F SM   G  P +V+Y+ LL  Y       + ++LF  M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   I  +   YN +I  YGK    ++A  +  +MQ RG+ P+A TY T+IA + + G+L
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRET 370
             A   F ++ + G++ D ++Y ++I  +   G +  AK L+ E+      +PNT+   +
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR+ EA  +F      GE  D+  F  +I+ +    K      V + M S G
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD    + +L+ Y +    +    L+ EM  +G
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG 608



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 230/467 (49%), Gaps = 13/467 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    YN ++       QW+   G+F EM +RG+ PD +T ++ ++   K G    A 
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +   M       DLV YS L+            +++F+ ++ +GIV D   YN +I+ +
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK  +  EA L+  +M+E+GV PD  +Y T++  +    +  +A+  F +M  +    D 
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGID-PSVVSYNTLLRVYGEAELFGEAIH 250
              N +I    ++G L  AK+   L   M   GI  P+ V +N+++    +     EA  
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKE---LISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F L+       +V+T+N++I  YG   + EKA  ++  M + GIEP+ +TYS ++  + 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G++D   +LF+++ S GV+   + Y  ++      G    AK++ HE+ +  T    +
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEK 425
              I    L R    +EA  +F++   A  VK +I++   MI+   + +K     E+F+ 
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKK-LGAMNVKFNIAIINTMIDAMYKVRKREEANELFDS 708

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           + + G  P++    +++ +  K    E AD+++S M++ GC  S ++
Sbjct: 709 ISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 227/510 (44%), Gaps = 40/510 (7%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + +    SP+V +YN V+    R  +   A  LF EM Q+G+ PD  TYS+ I    K  
Sbjct: 217 VKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKAR 276

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A   L+QM  +    D V Y+ +I     L  + +   +F  +   G++PD+   N
Sbjct: 277 AMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           + ++   K    KEA    + M  +G KPD V+YS LL+ Y      V+ L++F  M   
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN 396

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D +  NI+ID YG+  M  +A  +F  M++ G+ P   +Y T++  +       +A
Sbjct: 397 GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADA 456

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE------------ 296
           +  F  M    ++ + + YN++I+ +       KA  L+ EM +RGI             
Sbjct: 457 MDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516

Query: 297 ------------------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                                   P+ IT++++I  +G  GK+++A  +   + S G+E 
Sbjct: 517 SLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVF 388
           D V Y  ++  Y R G +     L  E+     +P TI     +  L   GR   A  + 
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +  ++G   DIS  G ++    RN      I +F+K+ +     +  II  ++++  K+
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           R+ E A++L+  +   G V +   +  M++
Sbjct: 697 RKREEANELFDSISATGLVPNASTYGVMIT 726



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 181/441 (41%), Gaps = 67/441 (15%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN+++    +    + A  +F +M++RG+ PD +TY T+I  F + G    A+    QM 
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV-PDLVAYNTMINVFGKAKLF 140
              +  D ++Y++LI+      +  KA  + S + S GI  P+ V +N++IN   K    
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA+ + + +   G +PD +++++L++ Y    K  +A  V   M  V    D+ T + +
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-VYGEAELFG------------- 246
           +D Y +     D   LF  M   G+ P+ ++Y  +L  ++ +    G             
Sbjct: 585 LDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 247 ---------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
                                EAI LF+ +    ++ N+   NTMI    K  + E+A  
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANE 704

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L   +   G+ PNA TY  +I    K G ++ A  +F  +  SG                
Sbjct: 705 LFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG---------------- 748

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
                A + RLL+ +           I +L   G I +A     +        + S    
Sbjct: 749 ----CAPSSRLLNNI-----------IRVLLEKGEISKAGNYLSKVDGKTISLEASTASL 793

Query: 406 MIELFSRNKKYANVIEVFEKM 426
           M+ LFSR  KY   I+    M
Sbjct: 794 MLSLFSRKGKYREQIKSLPAM 814



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 146/333 (43%), Gaps = 1/333 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDSAIS 75
           P    YN +++          A  L  EM  RGI  P+   ++++I    KEG    A  
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               +       D++ +++LI+    +    KA  +   + S GI PD+V Y+ +++ + 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     +  +L  EM  +GVKP T++Y  +L+    + + V A  +  EM E    +D++
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TC I++    + +   +A  LF  +  M +  ++   NT++    +     EA  LF  +
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N  TY  MI    K    E+A N+   M+  G  P++   + II +  + G++
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            +A     K+    + ++      M+  + R G
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 212/392 (54%), Gaps = 13/392 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           ++A   P++  YN ++    +     + A  +FDEM++ G+ PDR T+++LI    + G+
Sbjct: 262 KKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGL 321

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           ++ +     +M++  +  D+  ++ LI+   K      A SI + ++   I P++V Y+T
Sbjct: 322 WEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI+ +GK   F+EA  L  +M+E GV+PD VSY+TL+++Y +  +F +AL    +M  V 
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T N +ID YG+    KDA  LF  M+  G+ P+V++Y+ L+  Y +A +  +  
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++F   +R  ++ +VV Y+++I    K    E A  L+QEM   GI+PN +TY+++I  +
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561

Query: 310 GKAGKLDRAAML-------FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           G+ G+ D+   +        QK+    +E+      +   A +  G++A A  + HE++Q
Sbjct: 562 GRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLA-AVSVFHEMQQ 620

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQ 390
               PN +     +   +R   ++EA+ +  Q
Sbjct: 621 FGLKPNVVTFSAILNACSRCASLQEASVLLEQ 652



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 234/453 (51%), Gaps = 15/453 (3%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           ++++  + R  + E+A  +F+  ++ G   + Y YS +++ +G+ G    A+   Q M++
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263

Query: 83  DRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                +L+ Y+ +I+   K   D  +A+ IF  ++  G+ PD + +N++I V  +  L++
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +++ +  EM+ +G++ D  +++TL++   +  +   A S+   M   N   ++ T + MI
Sbjct: 324 DSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMI 383

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D YG+L   ++A  L+  M++ G+ P  VSYNTL+ +Y +   F +A+   + M+R  ++
Sbjct: 384 DGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLK 443

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +VVTYN +I  YGK  +++ A  L  +M+  G+ PN +TYS +I  + KAG     + +
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNV 503

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
           F + + +G++ D VLY ++I +  + GLV  A  LL E+     QPN +   + I    R
Sbjct: 504 FTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 563

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMI--------ELFSRNKKYANVIEVFEKMRSA 429
            G+ ++   V  +A     V+ I      +        +  S +      + VF +M+  
Sbjct: 564 YGQADKLEAV--KANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQF 621

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           G  P+    + +LN+  +    + A  L  +M+
Sbjct: 622 GLKPNVVTFSAILNACSRCASLQEASVLLEQMR 654



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 211/438 (48%), Gaps = 50/438 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ I D + +E    P    +N ++    R   WE +  +F EM++RGI  D +T++TL
Sbjct: 289 QALDIFDEMQKEG-VEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTL 347

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G  + A S +  M    +S ++V YS +I+   KL  + +AIS++  +K SG+
Sbjct: 348 IDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGV 407

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V+YNT+I+++ K   F +A +  ++M   G+K D V+Y+ L++ Y +  K+ +A  
Sbjct: 408 RPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAC 467

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M       ++ T + +ID Y +  M +D   +F   ++ G+ P VV Y++L+    
Sbjct: 468 LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCC 527

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK------------------ 282
           +  L  +A+ L + M +  I+ N+VTYN++I  YG+  + +K                  
Sbjct: 528 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGER 587

Query: 283 -----------------------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
                                  A ++  EMQ  G++PN +T+S I+    +   L  A+
Sbjct: 588 SMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEAS 647

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
           +L +++R     +  + +  ++   E+V +   A+RL  E      I R    T  A   
Sbjct: 648 VLLEQMRFFDGWVYGIAHGLLMGLREQVWV--EAQRLFDE------ISRMDYATGAAFYN 699

Query: 380 RIEEATWVFRQAFDAGEV 397
            + +  W F Q   A EV
Sbjct: 700 ALTDVLWHFGQRQGAQEV 717



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 209/403 (51%), Gaps = 15/403 (3%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT--YSTLITCFGKEGMFDSAISWL 77
           F Y  +LR +    +WE A   ++ M Q+      ++   S +I+  G+ G  + A+   
Sbjct: 166 FPY--LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVF 223

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            + ++     ++  YS ++    +     +A+ +F  +K +G  P+L+ YNT+I+  GK 
Sbjct: 224 NRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKG 283

Query: 138 KL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +  K+A  + +EM+++GV+PD +++++L+ +      + ++  VFAEM       D+ T
Sbjct: 284 GVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFT 343

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N +ID     GQ+++A     +  +MR   I P+VV+Y+T++  YG+   F EAI L+ 
Sbjct: 344 FNTLIDAVCKGGQMELAAS---IMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYH 400

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  + V+YNT+I IY K    + A    ++M+  G++ + +TY+ +I  +GK G
Sbjct: 401 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQG 460

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K   AA LF K++  G+  + + Y  +I +Y + G+      +  E +    +P+ +   
Sbjct: 461 KYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYS 520

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           + I    + G +E+A  + ++   AG   +I  +  +I+ + R
Sbjct: 521 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 563



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 193/372 (51%), Gaps = 8/372 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L     A+ +F+R + +G   ++ AY+ M++ +G++   +EA  + + M
Sbjct: 202 LASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAM 261

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           ++ G KP+ ++Y+T+++   +      +AL +F EM +     D  T N +I V  +  +
Sbjct: 262 KKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGL 321

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +D+ R+F  M++ GI+  + ++NTL+    +      A  +   M+ K I  NVVTY+T
Sbjct: 322 WEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           MI  YGK    E+A +L  +M+  G+ P+ ++Y+T+I I+ K G+ D A +  + +   G
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           ++ D V Y  +I AY + G    A  L  +++     PN +     I   ++AG  ++ +
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VF +   AG   D+ ++  +I+   +     + + + ++M  AG  P+      ++++Y
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561

Query: 446 GKLREFETADDL 457
           G+   +  AD L
Sbjct: 562 GR---YGQADKL 570



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 164/322 (50%), Gaps = 9/322 (2%)

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +R +  K  ++  STL  L     K   AL VF    +     ++   + M+  YG+  
Sbjct: 194 HLRSEWSKLASIMISTLGRL----GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSG 249

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHLFRLMQRKEIEQNVVTY 267
             ++A ++F +M+K G  P++++YNT++   G+  +   +A+ +F  MQ++ +E + +T+
Sbjct: 250 RCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITF 309

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N++I +  +    E +  +  EMQ RGIE +  T++T+I    K G+++ AA +   +R 
Sbjct: 310 NSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRG 369

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
             +  + V Y TMI  Y ++G    A  L H++++    P+ +   T I I A+ GR ++
Sbjct: 370 KNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 429

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A    +     G   D+  +  +I+ + +  KY +   +F+KM+  G  P+    + +++
Sbjct: 430 ALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALID 489

Query: 444 SYGKLREFETADDLYSEMQEEG 465
           SY K    +   ++++E +  G
Sbjct: 490 SYSKAGMHQDVSNVFTEFKRAG 511



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 9/306 (2%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +TL R+ G+ E+   A+ +F   Q+     NV  Y+ M+  YG+S    +A  + Q M+ 
Sbjct: 208 STLGRL-GKVEI---ALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263

Query: 293 RGIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            G +PN ITY+TII   GK G  L +A  +F +++  GVE D + + ++I    R GL  
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323

Query: 352 HAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            ++R+  E++    + +     T I  + + G++E A  +           ++  +  MI
Sbjct: 324 DSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMI 383

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + + +   +   I ++  M+ +G  PD      +++ Y KL  F+ A     +M+  G  
Sbjct: 384 DGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLK 443

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
                +  ++  YG +  +     LF+++  +  +     +  +   Y +A    D S +
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNV 503

Query: 528 MNRMNK 533
                +
Sbjct: 504 FTEFKR 509


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 227/469 (48%), Gaps = 9/469 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQ--WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P V+   +++     +    +  A  +   M + G+ P+  T+STL+     +     A+
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M +     D++ YS +I    K+   + AI +  +++  G  P++V Y+T+I+  
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K KL  EA   + EM  +G+ P+ V+YS++L+ +    +  EA S+F +M E N   D 
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI++D   +  M  +A  +F +M + G++P+V +YN L+  Y       EA  LF +
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RK    +V +YN +IK + KS   ++A  L+ EM ++ + P+ +TYST++  + + G+
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  L +++RS G+  D + Y  ++    + G +  A  LL  +++    P     TI
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L +     G++E A  +F   F  G   D+  +  MI    +        E+F  M   G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLS 478
             P+S    +++  + +  +   A  L  EM   G  FS D   FQMLS
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG--FSADSSTFQMLS 474



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 8/420 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P V  Y+ ++  + +     +A  L  +M ++G  P+   YST+I    K+ +   A+
Sbjct: 78  YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAM 137

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L +M    +S ++V YS+++     L   ++A S+F ++    ++PD V +N +++  
Sbjct: 138 EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGL 197

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K  +  EA+ + E M E+GV+P+  +Y+ L++ Y    +  EA  +F  M    C   +
Sbjct: 198 SKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV 257

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + NI+I  + +     +A  L   M    + P  V+Y+TL++ + +     +A  L   
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +  +++TY+ ++    K    ++A  L++ MQ   IEPN   Y+ +I      GK
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L+ A  LF  L   G++ D V Y  MI    + GL   A  L  ++      PN+     
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I    R G    A  +  +    G   D S F  + +L SR++    +I +F    S G
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDE----IISLFMHGSSQG 493



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 168/350 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y+ ++ ++ + K    A     EM  RGI+P+  TYS+++  F   G  
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S  +QM +  V  D V ++ L++   K     +A  +F  +   G+ P++  YN +
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +       EA+ L   M  +G  P   SY+ L+  + ++ +  EA  + AEM+    
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T + ++  + Q    +DA +L   MR  G+ P +++Y+ +L    +     EA  
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + MQ  +IE N+  Y  +I+      + E A  L   +  +GI+P+ +TY+ +I+   
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G  + A  LF+ +   G   +   Y  +I  + R G  ++A RL+ E+
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 43/257 (16%)

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEK---ATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           M    I  +V T   +I  +  S  H+    A +++  M   G++PN +T+ST++     
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHS-NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSS 59

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             K+  A  LF ++   G E D + Y T+I    ++G    A +LL ++ +    PN + 
Sbjct: 60  KAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119

Query: 368 RETAITILAR-----------------------------------AGRIEEATWVFRQAF 392
             T I  L +                                    GR  EAT +F+Q  
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           +   + D   F  +++  S+         VFE M   G  P+ +    +++ Y    + +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239

Query: 453 TADDLYSEMQEEGCVFS 469
            A  L++ M  +GC  S
Sbjct: 240 EAQKLFNIMVRKGCAPS 256



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 35/158 (22%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E++  P++F Y ++++ +    + E A  LF  +  +GI PD  TY+ +I+     G+ 
Sbjct: 354 QESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMIS-----GLL 408

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              +S                              ++A  +F  +   G +P+   YN +
Sbjct: 409 KGGLS------------------------------NEACELFRDMAVHGCLPNSCTYNVI 438

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           I  F +      A  LIEEM  +G   D+ ++  L +L
Sbjct: 439 IQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDL 476


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 231/472 (48%), Gaps = 17/472 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +  ++  + R  +   A  L D M + G+ P++ TY T++    K G   SA++ 
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239

Query: 77  LQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L++ME+   +  ++V+Y+ +I+   K   +S A ++F  ++   I PD+V YN MIN F 
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +  + +A  L++EM E+ + PD V++S L+N +V+  KF EA  ++ EM   +      
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + MID + + +    A+ +F+     G  P ++++NTL+  Y  A+   + I L   M
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N +TY T+I  + +  +   A +L+QEM + G+ PN +T +T++      GKL
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479

Query: 316 DRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
             A  +F+ ++ S           GVE D   Y  +I      G    A+ L  E+    
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI   + I  L +  R++EAT +F          D+  F  +I  + +     + +
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGL 599

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           E+F +M   G   D+     ++  + K+   + A D++ EM   G V+ D +
Sbjct: 600 ELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG-VYPDTI 650



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 213/475 (44%), Gaps = 48/475 (10%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  YN ++  + +  +   AH LF EM+++ I PD  TY+ +I
Sbjct: 236 ALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMI 295

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + +++ D+V +S LI    K   + +A  ++  +    I+
Sbjct: 296 NGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSII 355

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P  V Y++MI+ F K      A  +      +G  PD ++++TL+  Y    +  + + +
Sbjct: 356 PSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKL 415

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM E     +  T   +I  + Q+     A  L   M   G+ P+VV+ NTLL    +
Sbjct: 416 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475

Query: 242 AELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKATNLM 287
                +A+ +F+ MQ+ +           +E +V TYN +I      GK LE E+   L 
Sbjct: 476 NGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE---LY 532

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     D V + T+I  Y + 
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
           G+V     L  E+ Q                                G V D   +  +I
Sbjct: 593 GMVDDGLELFCEMGQ-------------------------------RGIVADAITYITLI 621

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             F +       +++F++M S+G +PD+  I  +L       E E A  +  ++Q
Sbjct: 622 YGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 249/539 (46%), Gaps = 22/539 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R  + ++   L  +M    +  + Y+++ L+ CF        
Sbjct: 75  SRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPF 134

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +      +V ++ L+         S+A+ +F ++      P++V + T++N
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMN 190

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P+ ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 191 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII 250

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   N +ID   +     DA  LF  M++  I P +V+YN ++  +  +  + +A  L
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVT++ +I  + K  +  +A  L  EM  R I P+ +TYS++I  + K
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD A  +F    + G   D + + T+I  Y R   V    +LLHE+ +     NTI 
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    + G +  A  + ++   +G   ++     +++    N K  + +E+F+ M+
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     +++       +F  A++LY EM   G V     +  M
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + +    + ++ G Y +A  ++D   +   M +R
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG-YCKAGMVDDGLELFCEMGQR 608



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 177/401 (44%), Gaps = 9/401 (2%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D AI     M + R    ++ +  L+ +  ++      IS+  +++   +  +  ++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++  F        A     ++ + G  P  V+++TLL+      +  EAL +F +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T   +++   +     +A  L   M + G+ P+ ++Y T++    +      A+
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 250 HLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +L R M+    I  NVV YNT+I    K   H  A NL  EMQ + I P+ +TY+ +I  
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           +  +G+   A  L Q++    +  D V +  +I A+ + G    A+ L  E+      P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T+   + I    +  R++ A  +F      G   DI  F  +I  + R K+  + I++  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M  AG   ++     +++ + ++ +   A DL  EM   G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG 458



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 185/438 (42%), Gaps = 19/438 (4%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINV---FGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           AI +F  +  S  +P ++ +  ++ V    G+  +       +E +R   +  +  S++ 
Sbjct: 65  AIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR---MPCNAYSFTI 121

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+  +    K   ALS F ++ ++     + T N ++      D   +A  LF  M K  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-- 179

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P+VV++ TL+          EA+ L   M    ++ N +TY T++    K  +   A 
Sbjct: 180 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 285 NLMQEMQNRG-IEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           NL+++M+    I PN + Y+TII  +W K G+   A  LF +++   +  D V Y  MI 
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLW-KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            +   G  + A++LL E+ +    P+ +     I    + G+  EA  ++ +      + 
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
               +  MI+ F +  +      +F    + G  PD      ++  Y + +  +    L 
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF-ERLDSDSNINKKELHHVVAGIYER 517
            EM E G V +   +  ++  +    D N  + L  E + S    N    + ++ G+ + 
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476

Query: 518 ANRLNDASRIMNRMNKRR 535
             +L DA  +   M K +
Sbjct: 477 G-KLKDALEMFKAMQKSK 493


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 232/511 (45%), Gaps = 44/511 (8%)

Query: 1   RSVAILDWIN----EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           RS   LD +     E  R SP V ++N V+    +  +   A  L +EM Q+G+ PD  T
Sbjct: 242 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVT 301

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y++++    K    D A   L+QM    V  D + Y+ +I        + ++  +F ++ 
Sbjct: 302 YNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S G++P +V +N+ ++   K    K+A  + + M  +G  PD VSYS LL+ Y    +F 
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +  ++F  M +     +    NI+I  + +  M  +A  +F  M+  G+ P VV+Y+TL+
Sbjct: 422 DMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLI 481

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             +       +A+  F  M    +E N V Y+++I  +    +  KA  L+ EM ++GI 
Sbjct: 482 SAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIP 541

Query: 297 ------------------------------------PNAITYSTIIAIWGKAGKLDRAAM 320
                                               P  +T++++I  +   GK+++A  
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILA 376
           +   + S G+E D V Y T++  Y + G +       + +LH+  +P T+     +  L 
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLF 661

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            AGR   A  +F +  D+G   DI  +  +++   RN      I +F K+ +     D  
Sbjct: 662 HAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 721

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           I+  V+N+  K+R  E A+DL++ +   G V
Sbjct: 722 ILNTVINALYKVRRREEANDLFAAISTSGLV 752



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 218/447 (48%), Gaps = 8/447 (1%)

Query: 23  NVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM- 80
           N  L+ +  AK+  E    L   M   G  P+  +Y+T+I     +     A+  +Q+M 
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254

Query: 81  -EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
            E  R S D+V ++ +I    K  + SKA ++ + +   G+ PD+V YN++++   KA+ 
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARA 314

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A L++ +M ++GV+PD ++Y+ +++ Y  +  + E+  +F +M        + T N 
Sbjct: 315 MDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNS 374

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
            +    +   +KDA+ +F  M   G  P +VSY+ LL  Y     F +  +LF  M  K 
Sbjct: 375 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  N   +N +I  + K    ++A  +  EMQ +G+ P+ +TYST+I+ + + G+L  A 
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAM 494

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRETAITI 374
             F ++ S G+E + V+Y ++I  +   G +  AK L+ E+      +PN +   + I  
Sbjct: 495 EKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHS 554

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   GR+ +A  VF      G+   I  F  +I+ +    K      V + M S G  PD
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614

Query: 435 SHIIALVLNSYGKLREFETADDLYSEM 461
                 +++ Y K  + +    L+ EM
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREM 641



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 148/346 (42%), Gaps = 36/346 (10%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            +N+++    +    + A  +F EM+ +G+ PD  TYSTLI+ F + G    A+    QM
Sbjct: 441 CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV------------------- 121
               +  + V+Y +LI       D  KA  + S + S GI                    
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 122 -----------------PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
                            P +V +N++I+ +      ++A  +++ M   G++PD V+Y+T
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++ Y ++ K  + L +F EM          T +I++D          A ++F  M   G
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
               + +Y  LL+     +L  EAI LF  +   + + ++   NT+I    K    E+A 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +L   +   G+ PN  TY  +I    K G ++ A  +F  +  SG 
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 1/318 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDSAIS 75
           P+   Y+ ++           A  L  EM  +GI  P+   +S++I     EG    A  
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               +        +V +++LI+    +    KA  +   + S GI PD+V YNT+++ + 
Sbjct: 567 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYC 626

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+    +  +L  EM  + VKP TV+YS +L+      +   A  +F EM +    +D+ 
Sbjct: 627 KSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDID 686

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I++    + D+  +A  LF  +  M     +   NT++    +     EA  LF  +
Sbjct: 687 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAI 746

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  NV TY  MI    K    E+A  +   M+  G  P++   + II +  + G +
Sbjct: 747 STSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 806

Query: 316 DRAAMLFQKLRSSGVEID 333
            +A     K+  + + ++
Sbjct: 807 VKAGYYMSKVDGTIISLE 824



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 134/298 (44%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  ++ ++ ++    +   AH +F+ +   G  P   T+++LI  +   G  + A   
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  D+V Y+ L+    K       + +F  +    + P  V Y+ +++    
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A+ +  EM + G   D  +Y  LL     N    EA+++F ++  ++C  D+T 
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   ++   ++A+ LF ++   G+ P+V +Y  ++    +     EA  +F  M+
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N +I++  +  +  KA   M ++    I   A T S +++++   GK
Sbjct: 783 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 90/191 (47%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+   Y++VL  +  A +   A  +F EM   G A D  TY  L+    +  + D A
Sbjct: 645 KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I+   ++       D+ + + +I    K+    +A  +F+ + +SG+VP++  Y  MI+ 
Sbjct: 705 ITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN 764

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    +EA  +   M + G  P +   + ++ + ++    V+A    ++++     L+
Sbjct: 765 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLE 824

Query: 194 LTTCNIMIDVY 204
            +T ++++ ++
Sbjct: 825 ASTTSLLMSLF 835


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 258/528 (48%), Gaps = 13/528 (2%)

Query: 14  RYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R+SP ++  YN+++    R  + +L   +   + + G+ PD ++YS LI  F K+G  D 
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 228

Query: 73  A-ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           A   +L+ MEQ  +   L+  S + EL  K+ +  KA SI  ++  SGI PDL  Y+ +I
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELC-KMKEMDKAESIVQKMVDSGIAPDLFTYSLII 287

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+K   +A  ++E+M E G +P++++Y++L++ Y  +  + E++ VF +M+     
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 347

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA--ELFGEAI 249
             +  CN  I    +     +A  +F SM   G  P ++SY+T+L  Y  A      +  
Sbjct: 348 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH 407

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++F LM  K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+  
Sbjct: 408 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 467

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            + G+LD A   F  +   GV     +Y  +I      G +  AK L+ E+   +  P  
Sbjct: 468 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 527

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                + I  L + GR+ E   +       G+  ++  F  ++E +           + +
Sbjct: 528 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 587

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGAR 483
            M S G  P+ +I   +++ Y K    + A  ++ +M  +G   +  ++  +L  L+ AR
Sbjct: 588 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 647

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +     +   E ++S + ++      V+ G+  R N  ++A+ ++ ++
Sbjct: 648 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC-RNNCTDEANMLLEKL 694



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 220/495 (44%), Gaps = 48/495 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F Y++++  + ++K  + A  + ++M + G  P+  TY++LI  +   GM++ ++ 
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM----- 130
             +QM    V   +   ++ I    K    ++A  IF  +   G  PD+++Y+TM     
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 396

Query: 131 --------------------------------INVFGKAKLFKEARLLIEEMREQGVKPD 158
                                           IN + +  +  +A L+ E+M+ +G+ PD
Sbjct: 397 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 456

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDADR 215
           TV+++T+++      +  +AL  F  M ++  P        +I     +G+L  AK+   
Sbjct: 457 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE--- 513

Query: 216 LFWSMRKMGIDPSVVSY-NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           L   M    I P  V Y ++++    +     E   +  +M +     NVVT+N++++ Y
Sbjct: 514 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                 E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ +   GV+   
Sbjct: 574 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 633

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRIEEATWVFRQ 390
           VLY  ++    +      AK++ HE+ +  T          +  L R    +EA  +  +
Sbjct: 634 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
            F      DI  F  +I    +  +     E+F+ + + G  P+    ++++ +  K   
Sbjct: 694 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 753

Query: 451 FETADDLYSEMQEEG 465
           +E AD+L+  +++ G
Sbjct: 754 YEEADNLFISVEKSG 768



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 172/390 (44%), Gaps = 7/390 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELA--HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P + +Y+ +L     A    LA  H +F+ M  +GIAP+++ ++ LI  + + GM D A+
Sbjct: 383 PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAM 442

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+   +  D V ++ +I    ++     A+  F+ +   G+ P    Y  +I   
Sbjct: 443 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 502

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                  +A+ LI EM  + + P  V Y S+++N   +  +  E   +   M +     +
Sbjct: 503 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 562

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +++ Y  +   ++A  L  +M  +GI+P+   Y TL+  Y +     +A+ +FR
Sbjct: 563 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 622

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K ++   V Y+ ++    ++     A  +  EM   G   +  TY  ++    +  
Sbjct: 623 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 682

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
             D A ML +KL +  V+ D + +  +I A  +VG    AK L   +      PN     
Sbjct: 683 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 742

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKD 399
             IT L +    EEA  +F     +G   D
Sbjct: 743 MMITNLIKEESYEEADNLFISVEKSGHASD 772



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 145/307 (47%), Gaps = 12/307 (3%)

Query: 178 ALSVFAEMNEVNCP----LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           A+ +F  M+   CP      + T NI+ID Y ++        +   + K G+ P   SY+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            +     + E+  +A  LF  M  + +   ++  N++IK   K  E +KA +++Q+M + 
Sbjct: 216 LIYGFVKDGEV-DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           GI P+  TYS II    K+  +D+A  + +++  +G   + + Y ++I  Y   G+   +
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 354 KRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
            R+  ++     IP      + I  L + GR  EA  +F      G   DI  +  M+  
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 410 F--SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +  + +   A+V  +F  M + G  P+ H+  +++N+Y +    + A  ++ +MQ +G +
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG-M 453

Query: 468 FSDQVHF 474
             D V F
Sbjct: 454 IPDTVTF 460



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 137/298 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  ++ ++ N+ +  +      + D M Q G  P+  T+++L+  +   G  + A + 
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  +  +Y  L++   K      A+++F  +   G+ P  V Y+ +++   +
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+    A+ +  EM E G      +Y  +L     N+   EA  +  ++  +N   D+ T
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I    ++   ++A  LF ++   G+ P++ +Y+ ++    + E + EA +LF  ++
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N ++++     E  KA+N +  +    +   A T S + +++ + GK
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 823


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 258/529 (48%), Gaps = 15/529 (2%)

Query: 14  RYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R+SP ++  YN+++    R  + +L   +   + + G+ PD ++YS LI  F K+G  D 
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66

Query: 73  A-ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           A   +L+ MEQ  +   L+  S + EL  K+ +  KA SI  ++  SGI PDL  Y+ +I
Sbjct: 67  AHCLFLEMMEQGVLPKILICNSIIKELC-KMKEMDKAESIVQKMVDSGIAPDLFTYSLII 125

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+K   +A  ++E+M E G +P++++Y++L++ Y  +  + E++ VF +M+     
Sbjct: 126 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 185

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA--ELFGEAI 249
             +  CN  I    +     +A  +F SM   G  P ++SY+T+L  Y  A      +  
Sbjct: 186 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH 245

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++F LM  K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+  
Sbjct: 246 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 305

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            + G+LD A   F  +   GV     +Y  +I      G +  AK L+ E+   +  P  
Sbjct: 306 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 365

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                + I  L + GR+ E   +       G+  ++  F  ++E +           + +
Sbjct: 366 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 425

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGA 482
            M S G  P+ +I   +++ Y K    + A  ++ +M  +G V    V + ++   L+ A
Sbjct: 426 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG-VKPTSVLYSIILHGLFQA 484

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           R+     +   E ++S + ++    + VV G   R N  ++A+ ++ ++
Sbjct: 485 RRTTAAKKMFHEMIESGTTVS-IHTYGVVLGGLCRNNCTDEANMLLEKL 532



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/504 (22%), Positives = 223/504 (44%), Gaps = 58/504 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++  +P +F Y++++  + ++K  + A  + ++M + G  P+  TY++LI  +   GM++
Sbjct: 111 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWN 170

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM- 130
            ++   +QM    V   +   ++ I    K    ++A  IF  +   G  PD+++Y+TM 
Sbjct: 171 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230

Query: 131 ------------------------------------INVFGKAKLFKEARLLIEEMREQG 154
                                               IN + +  +  +A L+ E+M+ +G
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP--------LDLTTCNIMIDVYGQ 206
           + PDTV+++T+++      +  +AL  F  M ++  P        L    CN     +G+
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN-----HGE 345

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSY-NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           L  AK+   L   M    I P  V Y ++++    +     E   +  +M +     NVV
Sbjct: 346 LVKAKE---LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 402

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T+N++++ Y      E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ +
Sbjct: 403 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 462

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRI 381
              GV+   VLY  ++    +      AK++ HE+ +  T          +  L R    
Sbjct: 463 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 522

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +EA  +  + F      DI  F  +I    +  +     E+F+ + + G  P+    +++
Sbjct: 523 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 582

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           + +  K   +E AD+L+  +++ G
Sbjct: 583 ITNLIKEESYEEADNLFISVEKSG 606



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 172/390 (44%), Gaps = 7/390 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELA--HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P + +Y+ +L     A    LA  H +F+ M  +GIAP+++ ++ LI  + + GM D A+
Sbjct: 221 PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAM 280

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+   +  D V ++ +I    ++     A+  F+ +   G+ P    Y  +I   
Sbjct: 281 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 340

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                  +A+ LI EM  + + P  V Y S+++N   +  +  E   +   M +     +
Sbjct: 341 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 400

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +++ Y  +   ++A  L  +M  +GI+P+   Y TL+  Y +     +A+ +FR
Sbjct: 401 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 460

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K ++   V Y+ ++    ++     A  +  EM   G   +  TY  ++    +  
Sbjct: 461 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 520

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
             D A ML +KL +  V+ D + +  +I A  +VG    AK L   +      PN     
Sbjct: 521 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 580

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKD 399
             IT L +    EEA  +F     +G   D
Sbjct: 581 MMITNLIKEESYEEADNLFISVEKSGHASD 610



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 137/298 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  ++ ++ N+ +  +      + D M Q G  P+  T+++L+  +   G  + A + 
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  +  +Y  L++   K      A+++F  +   G+ P  V Y+ +++   +
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+    A+ +  EM E G      +Y  +L     N+   EA  +  ++  +N   D+ T
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I    ++   ++A  LF ++   G+ P++ +Y+ ++    + E + EA +LF  ++
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N ++++     E  KA+N +  +    +   A T S + +++ + GK
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 661



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/124 (19%), Positives = 62/124 (50%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  +N+V+  + +  + + A  LFD +   G+ P+  TYS +IT   KE  ++ A +   
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            +E+   + D  L ++++ +    ++ +KA +  S +  + +  +    + + ++F +  
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660

Query: 139 LFKE 142
            ++E
Sbjct: 661 KYRE 664


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 258/528 (48%), Gaps = 13/528 (2%)

Query: 14  RYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R+SP ++  YN+++    R  + +L   +   + + G+ PD ++YS LI  F K+G  D 
Sbjct: 94  RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 152

Query: 73  A-ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           A   +L+ MEQ  +   L+  S + EL  K+ +  KA SI  ++  SGI PDL  Y+ +I
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELC-KMKEMDKAESIVQKMVDSGIAPDLFTYSLII 211

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+K   +A  ++E+M E G +P++++Y++L++ Y  +  + E++ VF +M+     
Sbjct: 212 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 271

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA--ELFGEAI 249
             +  CN  I    +     +A  +F SM   G  P ++SY+T+L  Y  A      +  
Sbjct: 272 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH 331

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++F LM  K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+  
Sbjct: 332 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            + G+LD A   F  +   GV     +Y  +I      G +  AK L+ E+   +  P  
Sbjct: 392 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 451

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                + I  L + GR+ E   +       G+  ++  F  ++E +           + +
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 511

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGAR 483
            M S G  P+ +I   +++ Y K    + A  ++ +M  +G   +  ++  +L  L+ AR
Sbjct: 512 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 571

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +     +   E ++S + ++      V+ G+  R N  ++A+ ++ ++
Sbjct: 572 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC-RNNCTDEANMLLEKL 618



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 220/495 (44%), Gaps = 48/495 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F Y++++  + ++K  + A  + ++M + G  P+  TY++LI  +   GM++ ++ 
Sbjct: 201 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 260

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM----- 130
             +QM    V   +   ++ I    K    ++A  IF  +   G  PD+++Y+TM     
Sbjct: 261 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 320

Query: 131 --------------------------------INVFGKAKLFKEARLLIEEMREQGVKPD 158
                                           IN + +  +  +A L+ E+M+ +G+ PD
Sbjct: 321 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 380

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDADR 215
           TV+++T+++      +  +AL  F  M ++  P        +I     +G+L  AK+   
Sbjct: 381 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE--- 437

Query: 216 LFWSMRKMGIDPSVVSY-NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           L   M    I P  V Y ++++    +     E   +  +M +     NVVT+N++++ Y
Sbjct: 438 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                 E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ +   GV+   
Sbjct: 498 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 557

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRIEEATWVFRQ 390
           VLY  ++    +      AK++ HE+ +  T          +  L R    +EA  +  +
Sbjct: 558 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
            F      DI  F  +I    +  +     E+F+ + + G  P+    ++++ +  K   
Sbjct: 618 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 677

Query: 451 FETADDLYSEMQEEG 465
           +E AD+L+  +++ G
Sbjct: 678 YEEADNLFISVEKSG 692



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/384 (20%), Positives = 164/384 (42%), Gaps = 12/384 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY-STLITCFGKEGMFDSAIS 75
           PS   Y  +++      +   A  L  EM  + I P    Y S++I    KEG       
Sbjct: 414 PSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKD 473

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M Q     ++V +++L+E    + +  +A ++   + S GI P+   Y T+++ + 
Sbjct: 474 IMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 533

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +A  +  +M  +GVKP +V YS +L+   +  +   A  +F EM E    + + 
Sbjct: 534 KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH 593

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  +++    + +   +A+ L   +  M +   ++++N ++    +     EA  LF  +
Sbjct: 594 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI 653

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N+ TY+ MI    K   +E+A NL   ++  G   ++   + I+ +     ++
Sbjct: 654 STYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEV 713

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV--------AHAKRLLH-ELRQPNTI 366
            +A+     +  + + ++      +   + R G++        A A  LL  EL Q  + 
Sbjct: 714 AKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELELSQTVSA 773

Query: 367 PRETAITILA--RAGRIEEATWVF 388
           P +  + +        +E  +WV+
Sbjct: 774 PPKLGVELGGALTQNELELWSWVY 797


>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
          Length = 815

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 238/523 (45%), Gaps = 43/523 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++    RA QW  A  L D+M +  IAP R TY+ LI   G  G +  A+  
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M  + V  DLV ++ ++   +    YSKA+S F  +K + + PD   +N +I    K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295

Query: 137 AKLFKEARLLIEEMRE-------------------------------------QGVKPDT 159
                +A  L   MRE                                     +G+KP+ 
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           VSY+ L+  Y  +     ALSV  ++ +     D+ +   +++ YG+      A  +F  
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           MRK    P+VV+YN L+  YG      EA+ +FR M++  I+ NVV+  T++    +S +
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                 ++   Q+RGI  N   Y++ I  +  A +L++A  L+Q +R   V+ D V +  
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP--RETAITIL---ARAGRIEEATWVFRQAFDA 394
           +I    R+     A   L E+ +  +IP  +E   ++L   ++ G++ EA  +F Q   A
Sbjct: 536 LISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+  +  M+  ++ ++K+    E+  +M + G  PDS   + ++ ++ K  +    
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             L   M+E+   F+  V F++ S     +++     L + +D
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 220/482 (45%), Gaps = 15/482 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           + A   P V  +  ++       + E    +F+ M   G+ P+  +Y+ L+  +   GM 
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A+S L  ++Q+ +  D+V Y+ L+    +     KA  +F  ++     P++V YN +
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ +G      EA  +  +M + G+KP+ VS  TLL     + K V   +V +       
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            L+    N  I  Y      + A  L+ SMRK  +    V++  L+        + EAI 
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   I      Y++++  Y K  +  +A ++  +M+  G EP+ I Y++++  + 
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            + K  +A  L  ++ ++G+E D +    ++ A+ + G  ++   L+  +R+   IP   
Sbjct: 612 ASEKWGKACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE-KEIPFTG 670

Query: 371 AI--TILARAGRIEEATWVFRQAFDAGEVKD-------ISVFGCMIELFSRNKKYANVIE 421
           A+   I +    ++E    +++A D  ++ D       I +   M+ LF ++ K   +++
Sbjct: 671 AVFFEIFSACNTLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +F K+ ++G   +    A++L     +  +    ++   M   G   S+Q++  ++S +G
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-FG 785

Query: 482 AR 483
            R
Sbjct: 786 ER 787



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 156/327 (47%), Gaps = 29/327 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AYN  + + + A + E A  L+  MR++ +  D  T++ LI+   +   +  AIS+L++M
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E   +     +YS+++    K    ++A SIF+++K +G  PD++AY +M++ +  ++ +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD------- 193
            +A  L+ EM   G++PD+++ S L+  + +  +      +   M E   P         
Sbjct: 617 GKACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + CN + +    +D+ +  D    S+       S+   N +L ++G++      + LF 
Sbjct: 677 FSACNTLQEWKRAIDLIQMMDPYLPSL-------SIGLTNQMLHLFGKSGKVEAMMKLFY 729

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    +  N+ TY  +++         K   +++ M   GI+P+   Y  II+ +G+  
Sbjct: 730 KIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-FGE-- 786

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                       RS+G+E +P++ Q +
Sbjct: 787 ------------RSAGIEFEPLIRQKL 801



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 126/297 (42%), Gaps = 31/297 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+MI ++ + +    A  LF+ M+K    P   +Y+ L+  +G A  +  A++L   M R
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  +  TYN +I   G S    +A  + ++M + G+ P+ +T++ +++ +    +  +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A   F+ ++ + V  D   +  +I    ++G  + A  L + +R+     R         
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR--------- 317

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
                                D+  F  ++ L+S   +  N   VFE M + G  P+   
Sbjct: 318 --------------------PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLF 493
              ++ +Y       TA  +  ++++ G +  D V +  +L+ YG  +     + +F
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTCLLNSYGRSRQPGKAKEVF 413


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 258/528 (48%), Gaps = 13/528 (2%)

Query: 14  RYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R+SP ++  YN+++    R  + +L   +   + + G+ PD ++YS LI  F K+G  D 
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 208

Query: 73  A-ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           A   +L+ MEQ  +   L+  S + EL  K+ +  KA SI  ++  SGI PDL  Y+ +I
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELC-KMKEMDKAESIVQKMVDSGIAPDLFTYSLII 267

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+K   +A  ++E+M E G +P++++Y++L++ Y  +  + E++ VF +M+     
Sbjct: 268 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 327

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA--ELFGEAI 249
             +  CN  I    +     +A  +F SM   G  P ++SY+T+L  Y  A      +  
Sbjct: 328 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVH 387

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++F LM  K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+  
Sbjct: 388 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 447

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            + G+LD A   F  +   GV     +Y  +I      G +  AK L+ E+   +  P  
Sbjct: 448 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 507

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                + I  L + GR+ E   +       G+  ++  F  ++E +           + +
Sbjct: 508 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 567

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGAR 483
            M S G  P+ +I   +++ Y K    + A  ++ +M  +G   +  ++  +L  L+ AR
Sbjct: 568 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 627

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +     +   E ++S + ++      V+ G+  R N  ++A+ ++ ++
Sbjct: 628 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC-RNNCTDEANMLLEKL 674



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/499 (21%), Positives = 222/499 (44%), Gaps = 48/499 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++  +P +F Y++++  + ++K  + A  + ++M + G  P+  TY++LI  +   GM++
Sbjct: 253 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWN 312

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM- 130
            ++   +QM    V   +   ++ I    K    ++A  IF  +   G  PD+++Y+TM 
Sbjct: 313 ESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 372

Query: 131 ------------------------------------INVFGKAKLFKEARLLIEEMREQG 154
                                               IN + +  +  +A L+ E+M+ +G
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAK 211
           + PDTV+++T+++      +  +AL  F  M ++  P        +I     +G+L  AK
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 212 DADRLFWSMRKMGIDPSVVSY-NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           +   L   M    I P  V Y ++++    +     E   +  +M +     NVVT+N++
Sbjct: 493 E---LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 549

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           ++ Y      E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ +   GV
Sbjct: 550 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 609

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRIEEATW 386
           +   VLY  ++    +      AK++ HE+ +  T          +  L R    +EA  
Sbjct: 610 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 669

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  + F      DI  F  +I    +  +     E+F+ + + G  P+    ++++ +  
Sbjct: 670 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 729

Query: 447 KLREFETADDLYSEMQEEG 465
           K   +E AD+L+  +++ G
Sbjct: 730 KEESYEEADNLFISVEKSG 748



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 145/307 (47%), Gaps = 12/307 (3%)

Query: 178 ALSVFAEMNEVNCP----LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           A+ +F  M+   CP      + T NI+ID Y ++        +   + K G+ P   SY+
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            +     + E+  +A  LF  M  + +   ++  N++IK   K  E +KA +++Q+M + 
Sbjct: 196 LIYGFVKDGEV-DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           GI P+  TYS II    K+  +D+A  + +++  +G   + + Y ++I  Y   G+   +
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 354 KRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
            R+  ++     IP      + I  L + GR  EA  +F      G   DI  +  M+  
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 410 F--SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +  + +   A+V  +F  M + G  P+ H+  +++N+Y +    + A  ++ +MQ +G +
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG-M 433

Query: 468 FSDQVHF 474
             D V F
Sbjct: 434 IPDTVTF 440



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/384 (20%), Positives = 164/384 (42%), Gaps = 12/384 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY-STLITCFGKEGMFDSAIS 75
           PS   Y  +++      +   A  L  EM  + I P    Y S++I    KEG       
Sbjct: 470 PSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKD 529

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M Q     ++V +++L+E    + +  +A ++   + S GI P+   Y T+++ + 
Sbjct: 530 IMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 589

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +A  +  +M  +GVKP +V YS +L+   +  +   A  +F EM E    + + 
Sbjct: 590 KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH 649

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  +++    + +   +A+ L   +  M +   ++++N ++    +     EA  LF  +
Sbjct: 650 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI 709

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N+ TY+ MI    K   +E+A NL   ++  G   ++   + I+ +     ++
Sbjct: 710 STYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEV 769

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV--------AHAKRLLH-ELRQPNTI 366
            +A+     +  + + ++      +   + R G++        A A  LL  EL Q  + 
Sbjct: 770 AKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELELSQTVSA 829

Query: 367 PRETAITILA--RAGRIEEATWVF 388
           P +  + +        +E  +WV+
Sbjct: 830 PPKLGVELGGALTQNELELWSWVY 853


>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cucumis sativus]
          Length = 858

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 265/603 (43%), Gaps = 77/603 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W N    Y  +V  YN+VL  + +A++W L   L+ EM ++GI P   TY TL
Sbjct: 168 RALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTL 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS--- 117
           I  + K G  + A+ WL++M +  +  D V    +++L +K  ++ KA S F +  S   
Sbjct: 228 IDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNS 287

Query: 118 -----------------SGIVPDLVA-----YNTMINVFGKAKLFKEARLLIEEMREQGV 155
                            S + P  V+     YNT+I+ +GKA   KEA    E M ++GV
Sbjct: 288 MKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGV 347

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P TV+++T++++   + +  E   +  +M E+ CP D  T NI+I +Y + D    A  
Sbjct: 348 SPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASN 407

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE-----QNVVT---- 266
            F  M + G+ P +VSY TLL  Y    +  EA  L   M  + +E     Q+ +T    
Sbjct: 408 YFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYI 467

Query: 267 -------------------------YNTMIKIYGKS---LEHEKATNLMQEMQNRGIEPN 298
                                    Y+  I  YG+    LE E+     QE +   +   
Sbjct: 468 DAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTV--- 524

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            + ++ +I  +G      +A  +F  ++S+GV  D   Y ++I       + A A   L 
Sbjct: 525 -LEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLK 583

Query: 359 ELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           +++      + IP    I+  ++ G +E A  ++R+    G   DI V+G +I  F+   
Sbjct: 584 KMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAG 643

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS--EMQEEG-CVFSDQ 471
                I     M+  G   ++ I   ++  Y K+   + A + Y   E  ++G  ++S  
Sbjct: 644 SVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSN 703

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               M+ LY  R      E +FE L      N+     ++  +Y++  R+ +A  +  +M
Sbjct: 704 C---MIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLC-MYKKIGRIQEAICVARQM 759

Query: 532 NKR 534
            ++
Sbjct: 760 KEQ 762



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 242/486 (49%), Gaps = 9/486 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S + YN ++    +A Q + A   F+ M + G++P   T++T+I   G  G       
Sbjct: 313 SLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTF 372

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +Q+ME+ +   D   Y+ LI L  K  +   A + F+ ++ +G+ PD+V+Y T++  + 
Sbjct: 373 LMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYS 432

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
              +  EA  LI EM E+G++ D  + S L  +Y++     E+ S F   + +   +   
Sbjct: 433 IRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFH-LAGHMSSE 491

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             +  ID YG+     +A+R+F S ++     +V+ +N +++ YG  + + +A  +F  M
Sbjct: 492 CYSANIDAYGERGFILEAERVFVSCQEEK-KCTVLEFNVMIKAYGVVKDYAKAQKIFDSM 550

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  +  +Y+++I+I   +     A   +++MQ+ G+  + I YS +I+ + K G L
Sbjct: 551 KSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHL 610

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           + A  L++++   GV+ D ++Y  +I A+   G V  A   ++ +++     NT+   + 
Sbjct: 611 EMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSL 670

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + G ++EA   ++      +   I    CMI+L+S         E+FE ++  G 
Sbjct: 671 IKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE 730

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
             +    A++L  Y K+   + A  +  +M+E+G + SD + F  M+SLY     F    
Sbjct: 731 -ANEFTFAMMLCMYKKIGRIQEAICVARQMKEQG-LLSDLLSFNNMISLYAMDGRFKEAV 788

Query: 491 SLFERL 496
           S+F+ +
Sbjct: 789 SIFQEM 794



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 155/296 (52%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  +NV+++     K +  A  +FD M+  G+ PD+ +YS+LI       M   A+++L
Sbjct: 523 TVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYL 582

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M+   +  D + YS +I    KL     A  ++  +   G+ PD++ Y  +IN F  A
Sbjct: 583 KKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADA 642

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA   +  M+  G+  +TV Y++L+ LY +     EA   +  + + +    + + 
Sbjct: 643 GSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSS 702

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M K+A+ +F S++K G + +  ++  +L +Y +     EAI + R M+ 
Sbjct: 703 NCMIDLYSERSMVKEAEEIFESLKKKG-EANEFTFAMMLCMYKKIGRIQEAICVARQMKE 761

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           + +  +++++N MI +Y      ++A ++ QEM    ++P+  TY ++  +  K G
Sbjct: 762 QGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCG 817



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
              Y+VV+ +  +    E+A  L+ EM + G+ PD   Y  LI  F   G    AI+++ 
Sbjct: 594 CIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVN 653

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M++D +SG+ V+Y++LI+L  K+    +A   +  L+ +   P + + N MI+++ +  
Sbjct: 654 AMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERS 713

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           + KEA  + E ++++G + +  +++ +L +Y +  +  EA+ V  +M E     DL + N
Sbjct: 714 MVKEAEEIFESLKKKG-EANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFN 772

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            MI +Y      K+A  +F  M K  + P   +Y +L  V  +  +  +A+    +  +K
Sbjct: 773 NMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCGVSKQAVSKLEVTAKK 832

Query: 259 EIEQNVVTYNTMI 271
           + +  +  + +++
Sbjct: 833 DAQSGLQAWVSVL 845



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P++++ N ++         + A  +F+ ++++G A + +T++ ++  + K G  
Sbjct: 691 EQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEA-NEFTFAMMLCMYKKIGRI 749

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             AI   +QM++  +  DL+ ++N+I L      + +A+SIF  +  + + PD   Y ++
Sbjct: 750 QEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSL 809

Query: 131 INVFGKAKLFKEA 143
             V  K  + K+A
Sbjct: 810 GVVLLKCGVSKQA 822


>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 265/603 (43%), Gaps = 77/603 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W N    Y  +V  YN+VL  + +A++W L   L+ EM ++GI P   TY TL
Sbjct: 169 RALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTL 228

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS--- 117
           I  + K G  + A+ WL++M +  +  D V    +++L +K  ++ KA S F +  S   
Sbjct: 229 IDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNS 288

Query: 118 -----------------SGIVPDLVA-----YNTMINVFGKAKLFKEARLLIEEMREQGV 155
                            S + P  V+     YNT+I+ +GKA   KEA    E M ++GV
Sbjct: 289 MKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGV 348

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P TV+++T++++   + +  E   +  +M E+ CP D  T NI+I +Y + D    A  
Sbjct: 349 SPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASN 408

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE-----QNVVT---- 266
            F  M + G+ P +VSY TLL  Y    +  EA  L   M  + +E     Q+ +T    
Sbjct: 409 YFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYI 468

Query: 267 -------------------------YNTMIKIYGKS---LEHEKATNLMQEMQNRGIEPN 298
                                    Y+  I  YG+    LE E+     QE +   +   
Sbjct: 469 DAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTV--- 525

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            + ++ +I  +G      +A  +F  ++S+GV  D   Y ++I       + A A   L 
Sbjct: 526 -LEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLK 584

Query: 359 ELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           +++      + IP    I+  ++ G +E A  ++R+    G   DI V+G +I  F+   
Sbjct: 585 KMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAG 644

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS--EMQEEG-CVFSDQ 471
                I     M+  G   ++ I   ++  Y K+   + A + Y   E  ++G  ++S  
Sbjct: 645 SVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSN 704

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               M+ LY  R      E +FE L      N+     ++  +Y++  R+ +A  +  +M
Sbjct: 705 C---MIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLC-MYKKIGRIQEAICVARQM 760

Query: 532 NKR 534
            ++
Sbjct: 761 KEQ 763



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 242/486 (49%), Gaps = 9/486 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S + YN ++    +A Q + A   F+ M + G++P   T++T+I   G  G       
Sbjct: 314 SLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTF 373

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +Q+ME+ +   D   Y+ LI L  K  +   A + F+ ++ +G+ PD+V+Y T++  + 
Sbjct: 374 LMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYS 433

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
              +  EA  LI EM E+G++ D  + S L  +Y++     E+ S F   + +   +   
Sbjct: 434 IRHMVAEAEKLITEMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFH-LAGHMSSE 492

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             +  ID YG+     +A+R+F S ++     +V+ +N +++ YG  + + +A  +F  M
Sbjct: 493 CYSANIDAYGERGFILEAERVFVSCQEEK-KCTVLEFNVMIKAYGVVKDYAKAQKIFDSM 551

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  +  +Y+++I+I   +     A   +++MQ+ G+  + I YS +I+ + K G L
Sbjct: 552 KSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHL 611

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           + A  L++++   GV+ D ++Y  +I A+   G V  A   ++ +++     NT+   + 
Sbjct: 612 EMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSL 671

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + G ++EA   ++      +   I    CMI+L+S         E+FE ++  G 
Sbjct: 672 IKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGE 731

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
             +    A++L  Y K+   + A  +  +M+E+G + SD + F  M+SLY     F    
Sbjct: 732 -ANEFTFAMMLCMYKKIGRIQEAICVARQMKEQG-LLSDLLSFNNMISLYAMDGRFKEAV 789

Query: 491 SLFERL 496
           S+F+ +
Sbjct: 790 SIFQEM 795



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 155/296 (52%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  +NV+++     K +  A  +FD M+  G+ PD+ +YS+LI       M   A+++L
Sbjct: 524 TVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYL 583

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M+   +  D + YS +I    KL     A  ++  +   G+ PD++ Y  +IN F  A
Sbjct: 584 KKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADA 643

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA   +  M+  G+  +TV Y++L+ LY +     EA   +  + + +    + + 
Sbjct: 644 GSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSS 703

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M K+A+ +F S++K G + +  ++  +L +Y +     EAI + R M+ 
Sbjct: 704 NCMIDLYSERSMVKEAEEIFESLKKKG-EANEFTFAMMLCMYKKIGRIQEAICVARQMKE 762

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           + +  +++++N MI +Y      ++A ++ QEM    ++P+  TY ++  +  K G
Sbjct: 763 QGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCG 818



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
              Y+VV+ +  +    E+A  L+ EM + G+ PD   Y  LI  F   G    AI+++ 
Sbjct: 595 CIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVN 654

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M++D +SG+ V+Y++LI+L  K+    +A   +  L+ +   P + + N MI+++ +  
Sbjct: 655 AMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERS 714

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           + KEA  + E ++++G + +  +++ +L +Y +  +  EA+ V  +M E     DL + N
Sbjct: 715 MVKEAEEIFESLKKKG-EANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFN 773

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            MI +Y      K+A  +F  M K  + P   +Y +L  V  +  +  +A+    +  +K
Sbjct: 774 NMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCGVSKQAVSKLEVTXKK 833

Query: 259 EIEQNVVTYNTMI 271
           + +  +  + +++
Sbjct: 834 DAQSGLQAWVSVL 846



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P++++ N ++         + A  +F+ ++++G A + +T++ ++  + K G  
Sbjct: 692 EQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEA-NEFTFAMMLCMYKKIGRI 750

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             AI   +QM++  +  DL+ ++N+I L      + +A+SIF  +  + + PD   Y ++
Sbjct: 751 QEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSL 810

Query: 131 INVFGKAKLFKEA 143
             V  K  + K+A
Sbjct: 811 GVVLLKCGVSKQA 823


>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 813

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 153/595 (25%), Positives = 272/595 (45%), Gaps = 72/595 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W N++  +  +   YN++LR++ RA+QW     L++EM  RGIA    TY TL
Sbjct: 134 RALEIFEWFNKKG-HELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTL 192

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR--LKSS 118
           I  + K G  D A+SWL  M    V  D V    +++L +K  ++ KA   F +  L + 
Sbjct: 193 IDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFKKWSLGND 252

Query: 119 GIVPDLV---------------AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
             +  L                 YNT+I+ +GKA   KEA     +M +QGV P TV+++
Sbjct: 253 NAMATLELDERVVCANASFGSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFN 312

Query: 164 TLLNLYVENHKFVEALSVFA-EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           T++N+   NH  +E +S+   +M E+ C  +  T NI+I +Y + D    A + F  M++
Sbjct: 313 TMINI-CGNHGQLEEVSLLVRKMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKE 371

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY-------- 274
             ++P +VSY TLL  Y   ++ GEA  L + M  + +E +  T + + ++Y        
Sbjct: 372 ACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQ 431

Query: 275 -----------------------------GKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
                                        G +LE EK     Q+ +N  +    + ++ +
Sbjct: 432 SLLWFLRFHVAGNMTSECYAASIDAYGEHGHTLEAEKVFIWSQKQKNLSV----LEFNVM 487

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-- 363
           I  +G     ++A  LF  +   GV  D   Y ++I           AK  L ++++   
Sbjct: 488 IKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQEAGL 547

Query: 364 --NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             + IP    I   A+ G++E A  ++ +    G   D+ V+  +I +FS   +    I 
Sbjct: 548 VSDCIPYCVVICSFAKLGQLEMAEDIYWEMIRHGVQPDVIVYSILINVFSDAGRVKEAIS 607

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ--EEGC-VFSDQVHFQMLS 478
             ++M+ AG   ++ I   ++  Y K+   E A + Y  +Q  EEG  V+S      M+ 
Sbjct: 608 YVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSSNC---MID 664

Query: 479 LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           LY  +      + +F+ L  +   N+     ++  +Y++  R ++A +I  ++ K
Sbjct: 665 LYVKQSMVGQAKQIFDTLKKNGGANEFTFAMMLC-LYKKIERFDEAIQIAKQIRK 718



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 191/403 (47%), Gaps = 17/403 (4%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I +EA   P + +Y  +L      K    A  L  EM +R +  D+YT S L   + K G
Sbjct: 368 IMKEACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAG 427

Query: 69  MFDSAISWLQQMEQDRVSGDLV--LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           M D ++ W  +     V+G++    Y+  I+   +     +A  +F   +    +  ++ 
Sbjct: 428 MLDQSLLWFLRF---HVAGNMTSECYAASIDAYGEHGHTLEAEKVFIWSQKQKNL-SVLE 483

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           +N MI  +G  K +++A  L + M + GV  D  SY++L+ +   + +   A     +M 
Sbjct: 484 FNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQ 543

Query: 187 EVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           E     D     ++I  +   GQL+MA+D   ++W M + G+ P V+ Y+ L+ V+ +A 
Sbjct: 544 EAGLVSDCIPYCVVICSFAKLGQLEMAED---IYWEMIRHGVQPDVIVYSILINVFSDAG 600

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EAI     M++  +  N V YN++IK+Y K    EKA    + +Q     PN  + +
Sbjct: 601 RVKEAISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSSN 660

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            +I ++ K   + +A  +F  L+ +G   +   +  M+  Y+++     A ++  ++R+ 
Sbjct: 661 CMIDLYVKQSMVGQAKQIFDTLKKNG-GANEFTFAMMLCLYKKIERFDEAIQIAKQIRKL 719

Query: 363 -PNT-IPRETAITILARAGRIEEATWVFRQAFDAG-EVKDISV 402
            P T +     + + A AGR +EA   F++   A  +V D S+
Sbjct: 720 GPLTELSYNNVLDLYAIAGRPKEAIETFKEMVRASIQVNDCSL 762



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 195/462 (42%), Gaps = 90/462 (19%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + +A+ IF      G   + + YN M+   G+A+ ++    L  EM  +G+     +Y T
Sbjct: 132 WDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGT 191

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--WS--- 219
           L+++Y +  +  +ALS    M       D  T  I++ +Y +    + A+  F  WS   
Sbjct: 192 LIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFKKWSLGN 251

Query: 220 ---MRKMGIDPSVV---------SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
              M  + +D  VV         +YNTL+  YG+A    EA   F  M ++ +    VT+
Sbjct: 252 DNAMATLELDERVVCANASFGSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTF 311

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NTMI I G   + E+ + L+++M+     PN  TY+ +I+++ K   +  A   F+ ++ 
Sbjct: 312 NTMINICGNHGQLEEVSLLVRKMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKE 371

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEE 383
           + +E D V Y+T++ AY    +V  A+ L+ E+ +      +   + L R    AG +++
Sbjct: 372 ACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQ 431

Query: 384 A-TWVFR-----------------------QAFDAGEV-------KDISV--FGCMIELF 410
           +  W  R                          +A +V       K++SV  F  MI+ +
Sbjct: 432 SLLWFLRFHVAGNMTSECYAASIDAYGEHGHTLEAEKVFIWSQKQKNLSVLEFNVMIKAY 491

Query: 411 SRNKKYANVIEVFE-----------------------------------KMRSAGYFPDS 435
              K Y    ++F+                                   KM+ AG   D 
Sbjct: 492 GIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDC 551

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               +V+ S+ KL + E A+D+Y EM   G V  D + + +L
Sbjct: 552 IPYCVVICSFAKLGQLEMAEDIYWEMIRHG-VQPDVIVYSIL 592



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 48/310 (15%)

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
           E  ++  AL +F   N+    L+    NIM+   G+    +  + L+  M   GI  +  
Sbjct: 128 EQLRWDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCS 187

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ-- 288
           +Y TL+ VY +     +A+    +M  + ++ + VT   ++++Y K+ E +KA    +  
Sbjct: 188 TYGTLIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFKKW 247

Query: 289 -----------EMQNRGIEPNAI----TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
                      E+  R +  NA     TY+T+I  +GKAG+L  A+  F K+   GV   
Sbjct: 248 SLGNDNAMATLELDERVVCANASFGSHTYNTLIDTYGKAGQLKEASETFAKMLKQGV--- 304

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
                                        P T+   T I I    G++EE + + R+  +
Sbjct: 305 ----------------------------APTTVTFNTMINICGNHGQLEEVSLLVRKMEE 336

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +   +  +I L++++       + FE M+ A   PD      +L +Y   +    
Sbjct: 337 LRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYSIRKMVGE 396

Query: 454 ADDLYSEMQE 463
           A++L  EM E
Sbjct: 397 AEELVKEMDE 406



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 21/243 (8%)

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           I  + L  ++A  + +    +G E N I Y+ ++   G+A +  R   L+ ++ + G+  
Sbjct: 125 ILKEQLRWDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAA 184

Query: 333 DPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
               Y T+I  Y + G     ++    +L +  QP+ +     + +  +AG  ++A   F
Sbjct: 185 TCSTYGTLIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFF 244

Query: 389 RQ------------AFDAGEVKDISVFG-----CMIELFSRNKKYANVIEVFEKMRSAGY 431
           ++              D   V   + FG      +I+ + +  +     E F KM   G 
Sbjct: 245 KKWSLGNDNAMATLELDERVVCANASFGSHTYNTLIDTYGKAGQLKEASETFAKMLKQGV 304

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P +     ++N  G   + E    L  +M+E  C  + + +  ++SLY    D  M   
Sbjct: 305 APTTVTFNTMINICGNHGQLEEVSLLVRKMEELRCSPNTRTYNILISLYAKHDDIGMATK 364

Query: 492 LFE 494
            FE
Sbjct: 365 YFE 367


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 250/523 (47%), Gaps = 7/523 (1%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P++  YNVVL    R  + W     L DEMR  G+ PD +T ST+I    ++G+ D A+
Sbjct: 206 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAV 265

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           ++ + ++    +  +V Y+ L+++  K  +Y++A+ +   ++ +G  PD V YN +   +
Sbjct: 266 AFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTY 325

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A  F+EA   ++ M  +G+ P+  +Y+T++  Y    K  EAL++F +M +     ++
Sbjct: 326 ARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNV 385

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N+++ + G+         +   M + G  P+ V++NT+L V G+  +      +   
Sbjct: 386 NTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEG 445

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +E +  TYNT+I  YG+      A  +  EM + G  P   TY+ ++ +  + G 
Sbjct: 446 MRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGD 505

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRE 369
              A  +  K+R+ G + +   Y  ++  Y + G VA    + +E+       P+ +   
Sbjct: 506 WSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILR 565

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +    +  R++     F++    G   D+ +F  M+ ++++N  Y+   EVF+ ++ +
Sbjct: 566 TLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRS 625

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNM 488
           G  PD      +++ Y K  E   A+ + ++++    +  D V +  +++ +  +     
Sbjct: 626 GLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKE 685

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            + +   + +D        +H + G Y      ++A  ++  M
Sbjct: 686 AQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYM 728



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/525 (23%), Positives = 239/525 (45%), Gaps = 9/525 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L+ +  +  WE A  L     + G A D      ++   G+EG  D+  + L +     
Sbjct: 110 LLKALELSGHWEWALALLRWAGKEGAA-DASALEMVVRALGREGQHDAVCALLDETPLPP 168

Query: 85  VSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKE 142
            S  D+  Y+ ++    +   Y +A+ +F+ L+  G+ P LV YN +++V+G+  + +  
Sbjct: 169 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR 228

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
              L++EMR  GV+PD  + ST++     +    EA++ F ++        + T N ++ 
Sbjct: 229 IVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQ 288

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
           V+G+     +A R+   M + G  P  V+YN L   Y  A  F EA      M  K +  
Sbjct: 289 VFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLP 348

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           N  TYNT++  YG   + ++A  L  +M+  G  PN  TY+ ++ + GK  +      + 
Sbjct: 349 NAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEML 408

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT-IPRETAITILARAGRI 381
            ++  SG   + V + TM+    + G+  +  R+L  +R     + R+T  T++A  GR 
Sbjct: 409 GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRC 468

Query: 382 EEATWVFR---QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
              T  F+   +   AG    I+ +  ++ + SR   ++    +  KMR+ G+ P+    
Sbjct: 469 GSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSY 528

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR-KDFNMLESLFERLD 497
           +L+L  Y K         + +E+   G VF   V  + L +   + +  + +E+ F+ + 
Sbjct: 529 SLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVK 588

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
           +        + + +  IY +    + A+ + + + KR   +  L+
Sbjct: 589 ARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSI-KRSGLSPDLI 632



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 149/292 (51%), Gaps = 24/292 (8%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A ++P +  YN +L  + R   W  A  +  +MR +G  P+  +YS L+ C+ K G    
Sbjct: 484 AGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG---- 539

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIEL---------ARKLSDYSKAISIFSRLKSSGIVPD 123
            ++ +  +E + V G   ++ + + L          R+L     A   F  +K+ G  PD
Sbjct: 540 NVAGIAAIENE-VYGSGAVFPSWVILRTLVIANFKCRRLDGMETA---FQEVKARGYNPD 595

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           LV +N+M++++ K  ++ +A  + + ++  G+ PD ++Y++L+++Y +  +  EA  +  
Sbjct: 596 LVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKI-- 653

Query: 184 EMNEVNCP----LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +N++ C      D+ + N +I+ + +  + K+A R+   M   G+ P  V+Y+TL+  Y
Sbjct: 654 -LNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGY 712

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
              E+F EA  +   M +  ++   +TY  +++ Y ++   E+A   + E+ 
Sbjct: 713 SSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVS 764



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 169/372 (45%), Gaps = 39/372 (10%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R   +L+ + E +R   +P+   +N +L    +    +    + + MR  G+   R TY+
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYN 459

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           TLI  +G+ G   +A     +M     +  +  Y+ L+ +  +  D+S A SI S++++ 
Sbjct: 460 TLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTK 519

Query: 119 GIVPDLVAYNTMI-------NVFGKAKL------------------------FKEARL-- 145
           G  P+  +Y+ ++       NV G A +                        FK  RL  
Sbjct: 520 GFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDG 579

Query: 146 ---LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
                +E++ +G  PD V ++++L++Y +N  + +A  VF  +       DL T N ++D
Sbjct: 580 METAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMD 639

Query: 203 VYGQLDMAKDADRLFWSMR-KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +Y +   + +A+++   ++    + P VVSYNT++  + +  L  EA  +   M    + 
Sbjct: 640 MYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMA 699

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
              VTY+T++  Y       +A  ++  M   G++P  +TY  ++  + +A + + A   
Sbjct: 700 PCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGF 759

Query: 322 FQKLRSSGVEID 333
             ++  + ++ D
Sbjct: 760 LSEVSETDLDFD 771


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 212/427 (49%), Gaps = 7/427 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  Y+ ++  + R  + +    L +EM  RG AP+  TY+TL+     +G    A 
Sbjct: 97  FRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL--KSSGIVPDLVAYNTMIN 132
           S L+QM  +    +L+ +  +I+   K  +   A  +   +    SG+ PD++ +N++++
Sbjct: 157 SLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLD 216

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K +   +A  + +   E+G +P+ V+YSTL++   +  K  EAL + A+M E+ C  
Sbjct: 217 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 276

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T + ++D   ++   +DA  +   MR  G  P  V+YNTL+  + + +   EA+ L 
Sbjct: 277 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 336

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M       +VVTY T+     +S   ++A  ++  M  RG  PNAITYS+I+    KA
Sbjct: 337 REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 396

Query: 313 GKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIP 367
           G++  A   F+K+ R   V    + Y  +I    + G +  A    +R++   R P+ + 
Sbjct: 397 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVT 456

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L  AGRI+    +FR   + G V D+  +  +++   R  +     ++F++MR
Sbjct: 457 FSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516

Query: 428 SAGYFPD 434
           S G  PD
Sbjct: 517 SDGLSPD 523



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 246/544 (45%), Gaps = 17/544 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +   + ++A Y P V  Y  ++  + + ++ + A+ LF+E R +G  P   TY+T+
Sbjct: 13  KAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71

Query: 61  ITCFGKEGMFDSAISWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           I    K G  ++A++    M         +V YS LI+   +  +  K   +   +   G
Sbjct: 72  IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             P+ V YNT++N        KEA  L+E+M   G  P+ +++  ++    +  +   A 
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191

Query: 180 SVFAEMNEVNCPL--DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
            V  EM  +   L  D+ T N ++D   +     DA  +F    + G  P+VV+Y+TL+ 
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 251

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              +     EA+ L   M       N VTY+T++    K    E A  ++++M++ G  P
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 311

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           +A+TY+T+I  + K  +L  A  L +++  +G     V Y T+     R G    A  +L
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371

Query: 358 HELR----QPNTIPRETAITILARAGRIEEATWVF-RQAFDAGEVKDISVFGCMIELFSR 412
             +      PN I   + +  L +AGR+ EA   F + A D      +  +  +I+   +
Sbjct: 372 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
             K     E  E+M  AG  PD    ++++N        +T  +L+  M E GCV  D V
Sbjct: 432 AGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV-PDMV 490

Query: 473 HFQMLS---LYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIM 528
            +  L       +R D      LF+++ SD  + ++     ++ G+ E  NR  DA RI 
Sbjct: 491 TYATLVDRLCRASRVDEAF--DLFQQMRSDGLSPDRSTRRTMIHGLLE-VNRDEDAKRIQ 547

Query: 529 NRMN 532
           +  N
Sbjct: 548 DEEN 551



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 190/452 (42%), Gaps = 57/452 (12%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI+   K++   +A  L ++M ++ + PD V+Y  L++   +  +  EA  +F E     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR-KMGIDPSVVSYNTLLRVYGEAELFGEA 248
           C   + T N MID   +    ++A  L+  M    G  P+VV+Y+TL+          + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L   M  +    N VTYNT++         ++A +L+++M   G  P  IT+  II  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 309 WGKAGKLDR-------------------------------------AAMLFQKLRSSGVE 331
             K G+++                                      A  +F++    G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            + V Y T+I    ++  +  A +LL ++ +     NT+   T +  L + GR+E+A  V
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            RQ  DAG + D   +  +I+ F + ++    + +  +M  AG+ P       + +   +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL--FERLDSDSNINKK 505
              F+ A ++   M   GC  +   +  ++   G  K   + E+L  FE++  D  +   
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVD--GLCKAGRVTEALGYFEKMARDEVVAP- 417

Query: 506 ELHHVVA------GIYERANRLNDASRIMNRM 531
              HV+A      G+  +A ++++A   + RM
Sbjct: 418 ---HVIAYSALIDGLC-KAGKIDEAYEFLERM 445


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/554 (22%), Positives = 251/554 (45%), Gaps = 71/554 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ +  P  +AYN ++     A ++E A+ L +  R++G  P   +Y+ +++C G++G  
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQV 391

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++D +  +L  Y+ +I++  K      A+ +   +K +G+ P+++  N M
Sbjct: 392 DEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN- 189
           ++   KA+   +A  + E +  +  +PD V+Y +L+     + +  EA  ++ +M + N 
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 190 ----------------------------------CPLDLTTCNIMIDVYGQLDMAKDADR 215
                                             C  DL   N  +D   +    +    
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  ++ +G  P   SY  L+    +A    EA  LF  M+ +    +   YNT+I  + 
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           KS +  KA  L++EM+ +G EP  +TY ++I    K  +LD A MLF++ +S G+E++ V
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +Y ++I  + +VG                               RI+EA  +  +    G
Sbjct: 691 IYSSLIDGFGKVG-------------------------------RIDEAYLIMEELMQKG 719

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  + C+++   + ++ +  +  F+ M+     P+    +++++   K+R+F  A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHHVVAG 513
             + EMQ++G  F   V      + G  K  N++E  +LFE+      +    +++ +  
Sbjct: 780 VFWQEMQKQG--FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837

Query: 514 IYERANRLNDASRI 527
               ANR +DA R+
Sbjct: 838 GLSNANRASDAYRL 851



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 233/475 (49%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y+ +V  +  ++R   R  + + A  L DEM+   + PD   Y+  I CFGK G  
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A     +M+ + +  D V Y+++I +  K    ++A+ +F  +  +  VP   AYNTM
Sbjct: 287 DMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F++A  L+E  R +G  P  VSY+ +L+      +  EAL  F EM +   
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +L+T NIMID+  +    + A  +  +M+  G+ P+V++ N ++    +A+   +A  
Sbjct: 407 P-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  +  K    + VTY ++I+  G+    ++A  L ++M +    PNA+ Y+++I  + 
Sbjct: 466 IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+ +    ++ ++   G   D +L  T +    + G +   + L  E++    IP   
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + TI    L +AG   EA  +F    + G V D   +  +I+ F ++ K     ++ E+M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           ++ G+ P       V++   K+   + A  L+ E + +G   +  ++  ++  +G
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 217/448 (48%), Gaps = 4/448 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+V   N+++  + +A++ + A  +F+ +  +   PD  TY +LI   G+ G  
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    +QM       + V+Y++LI    K         I++ +   G  PDL+  NT 
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R L +E++  G  PD  SY+ L++  V+     EA  +F  M E  C
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    N +ID + +      A +L   M+  G +P+VV+Y +++    + +   EA  
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   + K IE NVV Y+++I  +GK    ++A  +M+E+  +G+ PN  T++ ++    
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           KA ++  A + FQ ++      + + Y  +I    ++     A     E++    +PN  
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I+ LA+AG I EA  +F +  + G V D +++  +IE  S   + ++   +FE+ 
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
           R  G    +    ++L+S  K    E A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 242/534 (45%), Gaps = 14/534 (2%)

Query: 1   RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R    L+ I EE   A + PS      ++ + +++++   A      MR+    P    Y
Sbjct: 144 RKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAY 203

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + LI         D  ++  QQM++   + ++ L++ LI +  +      A+S+   +KS
Sbjct: 204 TNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           + + PD+V YN  I+ FGKA     A     EM+  G+  D V+Y++++ +  +  +  E
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 178 ALSVFAEMN---EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           A+ +F  M+   +V C       N MI  YG     +DA  L    R+ G  PSVVSYN 
Sbjct: 324 AVELFEHMDQNKQVPCAYAY---NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           +L   G      EA+  F  M++  I  N+ TYN MI +  K+ + E A  +   M++ G
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAG 439

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PN IT + ++    KA +LD A  +F+ L       D V Y ++I    R G V  A 
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAY 499

Query: 355 RLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           +L  ++   N IP     T L R     GR E+   ++ +    G   D+ +    ++  
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            +  +      +F+++++ G+ PD+    ++++   K      A +L+  M+E+GCV   
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           + +  ++  +      N    L E + +  +      +  V     + +RL++A
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 4/380 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P+   Y  ++RN  +  + E  H +++EM + G +PD    +T + C  K G  +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  Q+++      D   Y+ LI    K     +A  +F  +K  G V D  AYNT+I
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K+    +A  L+EEM+ +G +P  V+Y ++++   +  +  EA  +F E       
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           L++   + +ID +G++    +A  +   + + G+ P+V ++N LL    +AE   EA+  
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+  +   N +TY+ +I    K  +  KA    QEMQ +G +PN  TY+T+I+   K
Sbjct: 747 FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRET 370
           AG +  A  LF+K +  G   D  +Y  +I         + A RL  E R +  +I  +T
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866

Query: 371 AITI---LARAGRIEEATWV 387
            + +   L +A  IE+A  V
Sbjct: 867 CVVLLDSLHKAECIEQAAIV 886



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 238/526 (45%), Gaps = 21/526 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AYN +L  + R +++     + +EM   G  P   T   ++  F K      A +++Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            + +       Y+NLI       D    +++F +++  G   ++  + T+I VF +    
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A  L++EM+   ++PD V Y+  ++ + +  K   A   F EM      LD  T   M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I V  + D   +A  LF  M +    P   +YNT++  YG A  F +A  L    +RK  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VV+YN ++   G+  + ++A    +EM+   I PN  TY+ +I +  KAGKL+ A +
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----------LLHELRQPNTIPRET 370
           +   ++ +G      L+  +I     V  +  A+R          L H+  +P+ +   +
Sbjct: 431 VRDAMKDAG------LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L R GR++EA  ++ Q  DA ++ +  V+  +I  F +  +  +  +++ +M   G
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD  ++   ++   K  E E    L+ E++  G    D   + +L ++G  K     E
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG-FIPDARSYTIL-IHGLVKAGFAHE 602

Query: 491 S--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +  LF  +     +     ++ V   + ++ ++N A +++  M  +
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 159/317 (50%), Gaps = 4/317 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y +++  +++A     A+ LF  M+++G   D   Y+T+I  F K G  + A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+       +V Y ++I+   K+    +A  +F   KS GI  ++V Y+++I+ F
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EE+ ++G+ P+  +++ LL+  V+  +  EAL  F  M ++ C  + 
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759

Query: 195 TTCNIMIDVYGQLDMAK-DADRLFWS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            T +I+I  +G   + K +   +FW  M+K G  P+V +Y T++    +A    EA  LF
Sbjct: 760 ITYSILI--HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              + K    +   YN +I+    +     A  L +E + +G      T   ++    KA
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA 877

Query: 313 GKLDRAAMLFQKLRSSG 329
             +++AA++   LR + 
Sbjct: 878 ECIEQAAIVGAVLRETA 894


>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
 gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
          Length = 773

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 246/520 (47%), Gaps = 13/520 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           ++++ R       W  A  LF  M RQ+   P  + Y+ +I   G+EG+ +      + M
Sbjct: 49  FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            ++ V  ++  ++ LI    +   Y  ++ + +R+K   + P+L+ YNT++N   K  L 
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLD 168

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  +MR +G++PD ++Y+TLL+         +A  VF  MNE     D  T   
Sbjct: 169 WEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKS 228

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++D +   +     + L   M   G  P +  YN+L+  Y +A     A  +F+ MQR  
Sbjct: 229 LVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGG 288

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +V TY+T+++IYG     E+  +L  +M++    P   TY+++I ++G+ G    + 
Sbjct: 289 CAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESI 348

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL-LHELRQPNTIPRETAITILARA 378
            LF  +  SGV+ D   Y  ++    R GL   A ++  H L   +T   E +  +++  
Sbjct: 349 NLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSY 408

Query: 379 GRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           G++   ++A   + +  +AG    +S +  +I+ +++   Y         M  AG+    
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPV 468

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
             +  V+ +Y K+   + A + +SE+Q+ EG    ++ H  +L +Y    D  +LE   E
Sbjct: 469 SSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC---DMGLLEEAKE 525

Query: 495 R---LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +   S +    ++ ++  +  R ++ + A+++++ M
Sbjct: 526 EFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEM 565



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 206/468 (44%), Gaps = 22/468 (4%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN VL    +    WE    LF +MR  GI PD  TY+TL++     G+ + A  
Sbjct: 150 PNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAM 209

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M +  V  D V Y +L++     +   +   +   ++  G  PD+  YN++I  + 
Sbjct: 210 VFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYA 269

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A     A  + ++M+  G  PD  +YSTLL +Y     F +  S+F++M +++ P  + 
Sbjct: 270 DAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVA 329

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I V+G+    +++  LF  M   G+ P   +Y+ LL V G   L  EA  + + M
Sbjct: 330 TYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHM 389

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              E   ++     +I  YGK   ++ A      ++  G++P    Y  +I  + K G  
Sbjct: 390 LTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLY 449

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-----NTIPRET 370
             A      +  +G +       +++ AY +VGL   A     EL+Q      +    ET
Sbjct: 450 VEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHET 509

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            + +    G +EEA   F    +  +V    V+  ++ L  R  K+    ++ ++M +AG
Sbjct: 510 LLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMIAAG 569

Query: 431 YFPDSHIIALVLNSYG---------------KLREFETADDLYSEMQE 463
                 ++ +V  +Y                KLR+ E + D Y+ + E
Sbjct: 570 GL-HQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVE 616



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/499 (22%), Positives = 217/499 (43%), Gaps = 38/499 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDSAISW 76
           +V+A+  ++    R  Q+E +  L   M++  + P+  TY+T++    K G+ ++  ++ 
Sbjct: 116 NVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNL 175

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             QM  + +  DL+ Y+ L+          +A  +F  +  SG+V D V Y ++++ F  
Sbjct: 176 FAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAG 235

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +        L+ EM ++G  PD   Y++L+  Y +      A  VF +M    C  D+ T
Sbjct: 236 SNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVET 295

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++ +YG     +    LF  M+ +   P+V +YN+L++V+GE   F E+I+LF  M 
Sbjct: 296 YSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMV 355

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +  TY+ ++ + G+     +A  + Q M      P+    + +I+ +GK     
Sbjct: 356 DSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYK 415

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A + + ++R +G++     Y  +I  Y + GL   A   L+ + +              
Sbjct: 416 DALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNK-------------- 461

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GYFPDS 435
                            AG    +S    ++E +S+   +   +E F +++   G   D 
Sbjct: 462 -----------------AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDE 504

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                +L  Y  +   E A + +  ++E   V   +V+  +LSL   R  ++    L   
Sbjct: 505 RTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLL-- 562

Query: 496 LDSDSNINKKELHHVVAGI 514
              D  I    LH VV GI
Sbjct: 563 ---DEMIAAGGLHQVVVGI 578


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/554 (22%), Positives = 251/554 (45%), Gaps = 71/554 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ +  P  +AYN ++     A ++E A+ L +  R++G  P   +Y+ +++C G++G  
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQV 391

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++D +  +L  Y+ +I++  K      A+ +   +K +G+ P+++  N M
Sbjct: 392 DEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN- 189
           ++   KA+   +A  + E +  +  +PD V+Y +L+     + +  EA  ++ +M + N 
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 190 ----------------------------------CPLDLTTCNIMIDVYGQLDMAKDADR 215
                                             C  DL   N  +D   +    +    
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  ++ +G  P   SY  L+    +A    EA  LF  M+ +    +   YNT+I  + 
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           KS +  KA  L++EM+ +G EP  +TY ++I    K  +LD A MLF++ +S G+E++ V
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +Y ++I  + +VG                               RI+EA  +  +    G
Sbjct: 691 IYSSLIDGFGKVG-------------------------------RIDEAYLIMEELMQKG 719

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  + C+++   + ++ +  +  F+ M+     P+    +++++   K+R+F  A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHHVVAG 513
             + EMQ++G  F   V      + G  K  N++E  +LFE+      +    +++ +  
Sbjct: 780 VFWQEMQKQG--FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837

Query: 514 IYERANRLNDASRI 527
               ANR +DA R+
Sbjct: 838 GLSNANRASDAYRL 851



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 234/475 (49%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y+ +V  +  ++R   R  + + A  L DEM+   + PD   Y+  I CFGK G  
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +M+ + +  D V Y+++I +  K    ++A+ +F  +  +  VP   AYNTM
Sbjct: 287 DMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F++A  L+E  R +G  P  VSY+ +L+      +  EAL  F EM +   
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +L+T NIMID+  +    + A  +  +M+  G+ P+V++ N ++    +A+   +A  
Sbjct: 407 P-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  +  K    + VTY ++I+  G+    ++A  L ++M +    PNA+ Y+++I  + 
Sbjct: 466 IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+ +    ++ ++   G   D +L  T +    + G +   + L  E++    IP   
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + TI    L +AG   EA  +F    + G V D   +  +I+ F ++ K     ++ E+M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           ++ G+ P       V++   K+   + A  L+ E + +G   +  ++  ++  +G
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 217/448 (48%), Gaps = 4/448 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+V   N+++  + +A++ + A  +F+ +  +   PD  TY +LI   G+ G  
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    +QM       + V+Y++LI    K         I++ +   G  PDL+  NT 
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R L +E++  G  PD  SY+ L++  V+     EA  +F  M E  C
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    N +ID + +      A +L   M+  G +P+VV+Y +++    + +   EA  
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   + K IE NVV Y+++I  +GK    ++A  +M+E+  +G+ PN  T++ ++    
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           KA ++  A + FQ ++      + + Y  +I    ++     A     E++    +PN  
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I+ LA+AG I EA  +F +  + G V D +++  +IE  S   + ++   +FE+ 
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
           R  G    +    ++L+S  K    E A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 242/534 (45%), Gaps = 14/534 (2%)

Query: 1   RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R    L+ I EE   A + PS      ++ + +++++   A      MR+    P    Y
Sbjct: 144 RKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAY 203

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + LI         D  ++  QQM++   + ++ L++ LI +  +      A+S+   +KS
Sbjct: 204 TNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS 263

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           + + PD+V YN  I+ FGKA     A     EM+  G+  D V+Y++++ +  +  +  E
Sbjct: 264 NSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNE 323

Query: 178 ALSVFAEMN---EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           A+ +F  M+   +V C       N MI  YG     +DA  L    R+ G  PSVVSYN 
Sbjct: 324 AVELFEHMDQNKQVPCAYAY---NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           +L   G      EA+  F  M++  I  N+ TYN MI +  K+ + E A  +   M++ G
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAG 439

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PN IT + ++    KA +LD A  +F+ L       D V Y ++I    R G V  A 
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAY 499

Query: 355 RLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           +L  ++   N IP     T L R     GR E+   ++ +    G   D+ +    ++  
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            +  +      +F+++++ G+ PD+    ++++   K      A +L+  M+E+GCV   
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           + +  ++  +      N    L E + +  +      +  V     + +RL++A
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 4/380 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P+   Y  ++RN  +  + E  H +++EM + G +PD    +T + C  K G  +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  Q+++      D   Y+ LI    K     +A  +F  +K  G V D  AYNT+I
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K+    +A  L+EEM+ +G +P  V+Y ++++   +  +  EA  +F E       
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           L++   + +ID +G++    +A  +   + + G+ P+V ++N LL    +AE   EA+  
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+  +   N +TY+ +I    K  +  KA    QEMQ +G +PN  TY+T+I+   K
Sbjct: 747 FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRET 370
           AG +  A  LF+K +  G   D  +Y  +I         + A RL  E R +  +I  +T
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866

Query: 371 AITI---LARAGRIEEATWV 387
            + +   L +A  IE+A  V
Sbjct: 867 CVVLLDSLHKAECIEQAAIV 886



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/526 (23%), Positives = 238/526 (45%), Gaps = 21/526 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AYN +L  + R +++     + +EM   G  P   T   ++  F K      A +++Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            + +       Y+NLI       D    +++F +++  G   ++  + T+I VF +    
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A  L++EM+   ++PD V Y+  ++ + +  K   A   F EM      LD  T   M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I V  + D   +A  LF  M +    P   +YNT++  YG A  F +A  L    +RK  
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VV+YN ++   G+  + ++A    +EM+   I PN  TY+ +I +  KAGKL+ A +
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----------LLHELRQPNTIPRET 370
           +   ++ +G      L+  +I     V  +  A+R          L H+  +P+ +   +
Sbjct: 431 VRDAMKDAG------LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L R GR++EA  ++ Q  DA ++ +  V+  +I  F +  +  +  +++ +M   G
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD  ++   ++   K  E E    L+ E++  G    D   + +L ++G  K     E
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG-FIPDARSYTIL-IHGLVKAGFAHE 602

Query: 491 S--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +  LF  +     +     ++ V   + ++ ++N A +++  M  +
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 159/317 (50%), Gaps = 4/317 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y +++  +++A     A+ LF  M+++G   D   Y+T+I  F K G  + A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+       +V Y ++I+   K+    +A  +F   KS GI  ++V Y+++I+ F
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EE+ ++G+ P+  +++ LL+  V+  +  EAL  F  M ++ C  + 
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759

Query: 195 TTCNIMIDVYGQLDMAK-DADRLFWS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            T +I+I  +G   + K +   +FW  M+K G  P+V +Y T++    +A    EA  LF
Sbjct: 760 ITYSILI--HGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              + K    +   YN +I+    +     A  L +E + +G      T   ++    KA
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA 877

Query: 313 GKLDRAAMLFQKLRSSG 329
             +++AA++   LR + 
Sbjct: 878 ECIEQAAIVGAVLRETA 894


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 231/457 (50%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P VF+  ++L+ +    R+++  EL H + D+ R  G APD  +Y+T+I  F KEG  D 
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADD-RGGGSAPDVVSYTTVINGFFKEGDSDK 214

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M   R+S D+V YS++I    K     KA+ + + +  +G++P+ + YN++++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  ++  KEA   +++MR  GV+PD V+Y++L++   +N +  EA  +F  M +     
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   ++  Y       +   L   M + GI P    +N L+  Y + E   EA+ +F
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M++  +  NVVTY  +I I  KS   + A    ++M + G+ PN I Y+++I      
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K D+A  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +PN I  
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EAT +    F  G   D   +  +I  + R  +  + + +F++M S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  P+     ++L      R    A +LY  + + G
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y  V+    +    + A+  + EM  R I+PD  TYS++I    K    D A+ 
Sbjct: 193 APDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M ++ V  + + Y++++          +AI    +++S G+ PD+V YN++++   
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EAR + + M ++G++PD  +Y TLL  Y      VE  ++   M       D  
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I  Y + +   +A  +F  MR+ G++P+VV+Y  ++ +  ++    +A+  F  M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  N++ Y ++I       + +KA  L+ EM +RGI  N I +++II    K G++
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
             +  LF  +   GV+ + + Y T+I  Y   G +  A +LL  +     +P+ +   T 
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I    R  R+++A  +F++   +G   +I  +  +++     ++ A   E++  +  +G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 197/441 (44%), Gaps = 12/441 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P  +TY  LI C  + G  D   
Sbjct: 49  SIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGF 107

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     + + ++ L++        S A+ I   R+     +PD+ +   ++  
Sbjct: 108 AALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKG 167

Query: 134 FGKAKLFKEARLLIEEM---REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                  +EA  L+  M   R  G  PD VSY+T++N + +     +A S + EM +   
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + +I    +      A  +  +M K G+ P+ ++YN++L  Y  +E   EAI 
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   +E +VVTYN+++    K+    +A  +   M  RG+EP+  TY T++  + 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G L     L   +  +G+  D  ++  +I AY +   V  A  +  ++RQ    PN +
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I IL ++G +++A   F Q  D G   +I V+  +I       K+    E+  +M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 427 RSAGYFPDSHIIALVLNSYGK 447
              G   ++     +++S+ K
Sbjct: 468 LDRGICLNTIFFNSIIHSHCK 488



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN++L+ +   ++   A  L+  + + G   +  TY+ ++    K  + D A+ 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVF 134
             Q +    +  +   ++ +I    K+    +A  +F    S+G+VP+   Y  M  N+ 
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G+  L +E   L   M + G   D+   + ++   ++  +   A +  + ++E +  L+ 
Sbjct: 698 GQG-LLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 756

Query: 195 TTCNIMIDV 203
           +T ++ ID+
Sbjct: 757 STASLFIDL 765


>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 819

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 229/485 (47%), Gaps = 33/485 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +N+VL       Q+  A G F+ M+   IAPD +T + +I C  K G    A+ 
Sbjct: 255 GPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVD 314

Query: 76  WLQQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            L  M + RV  S D+V Y+++I             ++F  + + G+ P++V+YN ++  
Sbjct: 315 LLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGA 374

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +    +  EA  + + +++ G++PD VSY+TLLN Y  + +  +A  VF EM + +C  +
Sbjct: 375 YASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPN 434

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             + N +ID YG   M K+A  L   M K GI P VVS +TLL   G      +   +  
Sbjct: 435 KVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLE 494

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             + + IE N+V YN+ I  Y    ++EKA  L   M    + P+A+TY+ +I+   K G
Sbjct: 495 AAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLG 554

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           K   +   F+ +    + +   +Y ++I +Y +   +A A                    
Sbjct: 555 KYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEA-------------------- 594

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                    E+T++  +A  +G   D+  +  MI+ ++ +  + +V ++F++M      P
Sbjct: 595 ---------ESTFINMKA--SGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILP 643

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D+ I + ++ +  K  ++     L   M ++    + + +F++++     +D+     + 
Sbjct: 644 DAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEII 703

Query: 494 ERLDS 498
           E LDS
Sbjct: 704 EHLDS 708



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/536 (22%), Positives = 241/536 (44%), Gaps = 9/536 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +  W+  +  Y      Y ++++   R  Q + A GLF EM++    PD   Y++LI
Sbjct: 136 AVYVFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLI 195

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G++  AI+ +  M +  +      Y+N++       ++ KA+ +  ++  +G+ 
Sbjct: 196 NAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVG 255

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDLV +N +++ F     + +A    E M+   + PDT + + +++  V+  +  +A+ +
Sbjct: 256 PDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDL 315

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
              M E  V C  D+ T   +I  Y      ++   +F  M   G+ P++VSYN LL  Y
Sbjct: 316 LNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAY 375

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA  +F+L+++  +  +VV+Y T++  YG+S + EKA  +  EM+    +PN 
Sbjct: 376 ASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNK 435

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ++Y+ +I  +G AG    A  L  ++   G+  D V   T++ A  R         +L  
Sbjct: 436 VSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEA 495

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            +    + N +   + I      G  E+A  ++     +    D   +  +I    +  K
Sbjct: 496 AKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGK 555

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           YA  ++ FE M          + + ++ SY K  +   A+  +  M+  GC      +  
Sbjct: 556 YAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTA 615

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           M+  Y     +  +  LF+ ++ ++ +       + + + E  N+ N   R++  M
Sbjct: 616 MIQAYTDHGSWTSVWDLFKEMEGNAILPDAI---ICSSLMEALNKGNQYGRVLQLM 668



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 198/468 (42%), Gaps = 43/468 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y  ++ +     Q E    +FD M   G+ P+  +Y+ L+  +   GM   A  
Sbjct: 327 SPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFG 386

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + ++Q+ +  D+V Y+ L+    + +   KA  +F+ ++ +   P+ V+YN +I+ +G
Sbjct: 387 IFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYG 446

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------------- 166
            A +FKEA  L+ EM + G+ PD VS STLL                             
Sbjct: 447 SAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIV 506

Query: 167 ------NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
                   Y+    + +AL ++A M   N   D  T NI+I    +L    ++ + F  M
Sbjct: 507 AYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDM 566

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             + I  +   Y++L+  Y + +   EA   F  M+      +V+TY  MI+ Y      
Sbjct: 567 VDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSW 626

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
               +L +EM+   I P+AI  S+++    K  +  R   L + +    ++++   Y  +
Sbjct: 627 TSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEI 686

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA------ITILARAGRIEEATWVFRQAFDA 394
           I +   +     A  ++  L   +++P  +       +  L + G+ E    +F +   +
Sbjct: 687 IASCSMLRDWKTASEIIEHLD--SSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSS 744

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
                +S +  ++       K+   +EV + M  AG  P  ++   VL
Sbjct: 745 CSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVL 792



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/320 (18%), Positives = 126/320 (39%), Gaps = 49/320 (15%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    YN+++  + +  ++  +   F++M    I   +  YS+LI  +           
Sbjct: 537 NPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSY----------- 585

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               ++QD++                    ++A S F  +K+SG  PD++ Y  MI  + 
Sbjct: 586 ----VKQDKL--------------------AEAESTFINMKASGCFPDVLTYTAMIQAYT 621

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD-- 193
               +     L +EM    + PD +  S+L+    + +++   L +   M++    L+  
Sbjct: 622 DHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQK 681

Query: 194 -----LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                + +C+++ D     ++ +  D    S+       SV   N LL   G+       
Sbjct: 682 AYFEIIASCSMLRDWKTASEIIEHLDSSLPSI-------SVGKLNYLLNFLGKCGKTESM 734

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + LF  M        + TY  +++      +  K   ++Q M++ G+ P    Y  ++  
Sbjct: 735 MKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVLPY 794

Query: 309 WGKAGKLDRAAMLFQKLRSS 328
             +   +D   ++ QK+ +S
Sbjct: 795 IWRDNSMDYVTLMQQKINAS 814


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 218/429 (50%), Gaps = 10/429 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y+ V+       + + A  L D+M+ +G+ P+RYTY+++I    K G    A  
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M   ++  D V+Y+ LI    KL     A   F  + S  I PD + Y T+I  FG
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     E + L  EM  +G+KPD V+Y+TL+++Y +  + V A S+  EM ++    ++ 
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469

Query: 196 TCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +ID    +G+LD A +   L   MRK G+  +V  YN+++    +A    +AI L 
Sbjct: 470 TYGALIDGLCKHGELDTANE---LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M+   I+ + +TY T+I  Y +  + +KA  L+QEM +RG++P  +T++ ++  +   
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G L+    L   +   G+  D + Y T++  +     +    ++   +R     P     
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            IL     +A  ++EA +++++  + G V  ++ +  +I+ F + +K+    E+FE+MR 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706

Query: 429 AGYFPDSHI 437
            G   D  I
Sbjct: 707 HGLVADGEI 715



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 225/457 (49%), Gaps = 4/457 (0%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN+++ ++ R  + + AH L  +M  R   PD  +YST+I  +   G    A+  +  M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +   +  +   Y+++I L  K+    +A  +   + S  I+PD V Y T+I+ F K    
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           + A    +EM  + + PD ++Y+TL+  + +  K +E  ++F EM       D  T   +
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           IDVY +     +A  L   M +MG+ P++V+Y  L+    +      A  L   M++K +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + NV  YN+M+    K+   E+A  LM+EM+  GI+P+AITY+T+I  + + G +D+A  
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L Q++   G++   V +  ++  +  +G++    RLL  + +   +P       L +   
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619

Query: 381 IEEA----TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           I  +    T ++++  + G   D + +  +I+   + +       ++++M   GY P   
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
               ++  + K R+F  A +L+ EM+  G V   +++
Sbjct: 680 SYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 228/481 (47%), Gaps = 13/481 (2%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E+A  +F E    GI+ +  +Y+ +I    + G    A   L QM+    + D+V YS +
Sbjct: 243 EMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+    L +  KA+ +   ++  G+ P+   YN++I +  K     EA  ++ EM  Q +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            PD V Y+TL++ + +      A   F EM       D  T   +I  +GQ     +   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL---MQRKEIEQNVVTYNTMIK 272
           LF  M   G+ P  V+Y TL+ VY +A   GE ++ F L   M +  +  N+VTY  +I 
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKA---GEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              K  E + A  L+ EM+ +G++ N   Y++++    KAG +++A  L +++  +G++ 
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVF 388
           D + Y T+I AY R+G +  A +LL E+     QP  +     +      G +E+   + 
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
               + G V D   +  +++            +++++MR+ G  PDS+   +++  + K 
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
           R  + A  LY EM E+G V +   +  ++  +  ++ F     LFE +     +   E++
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716

Query: 509 H 509
           +
Sbjct: 717 N 717



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 3/341 (0%)

Query: 8   WINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           W +E    + SP    Y  +++   +  +      LF EM  RG+ PD  TY+TLI  + 
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G   +A S   +M Q  ++ ++V Y  LI+   K  +   A  +   ++  G+  ++ 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN+M+N   KA   ++A  L++EM   G+ PD ++Y+T+++ Y       +A  +  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +      + T N++++ +  L M +D DRL   M + GI P  ++YNTL++ +      
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
                +++ M+ + +  +  TYN +IK + K+   ++A  L +EM  +G  P   +Y+ +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI-VAYE 345
           I  + K  K   A  LF+++R  G+  D  +Y   + + YE
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYE 725


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 243/510 (47%), Gaps = 12/510 (2%)

Query: 23  NVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           N +L+    AK+ + A   L     + G  PD ++YS L+     +G    A   L+ M 
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 213

Query: 82  QDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +     S D+V Y+ +I+   K  D +KA  +F  +   GI PDLV Y+++++   KA+ 
Sbjct: 214 EGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 273

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A   + +M  +GV PD  +Y+ L+  Y    ++ EA+ VF EM   +   D+ T N+
Sbjct: 274 MGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNM 333

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +    K+A  +F +M   G +P V SY  +L  Y       +   LF LM    
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDG 393

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  ++ T++ +IK Y      +KA  +  EM++ G++P+ +TY+T+IA   + GK+D A 
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM 453

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITIL 375
             F ++   GV  D   Y  +I  +   G +  AK L+ E+     + + +   + I  L
Sbjct: 454 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNL 513

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + GRI +A  +F    + G+  D  V+  +++ +    K    + VF+ M SAG  P+ 
Sbjct: 514 CKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 573

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLF 493
            +   ++N Y K+   +    L+ EM ++G +    + + ++   L+ A +         
Sbjct: 574 VVYGTLVNGYCKIGRIDEGLSLFREMLQKG-IKPSTILYNIIIDGLFVAGRTVPAKVKFH 632

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLND 523
           E  +S   INK   + V+ G ++  NR  D
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFK--NRCFD 660



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 214/494 (43%), Gaps = 39/494 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP V AY  V+    +      A  LF EM QRGI PD  TYS+++    K      
Sbjct: 217 AVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGK 276

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM    V  D   Y+NLI        + +A+ +F  ++   I+PD+V  N ++ 
Sbjct: 277 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG 336

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  PD  SY  +LN Y      V+   +F  M       
Sbjct: 337 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T +++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI----------------- 295
             M  + +  +   Y+ +I+ +       KA  L+ E+ N G+                 
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKL 516

Query: 296 ------------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                              P+A+ YS ++  +   GK+++A  +F  + S+G+E + V+Y
Sbjct: 517 GRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 576

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  +
Sbjct: 577 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTE 636

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   +   +  ++  F +N+ +   I +F+++R+     D   +  ++    + R  E 
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 696

Query: 454 ADDLYSEMQEEGCV 467
           A DL++ +   G V
Sbjct: 697 AKDLFASISRSGLV 710



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 173/355 (48%), Gaps = 6/355 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P VF+Y ++L              LFD M   GIAPD YT+S LI  +   GM D A+ 
Sbjct: 360 NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMI 419

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    V  D+V Y+ +I    ++     A+  F+++   G+ PD  AY+ +I  F 
Sbjct: 420 IFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 479

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 +A+ LI E+   G++ D V +S+++N   +  + ++A ++F     V    D  
Sbjct: 480 THGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAV 539

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             ++++D Y  +   + A R+F +M   GI+P+VV Y TL+  Y +     E + LFR M
Sbjct: 540 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599

Query: 256 QRKEIEQNVVTYNTMIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +K I+ + + YN +I    + G+++    A     EM   GI  N  TY+ ++  + K 
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVP---AKVKFHEMTESGIAINKCTYNIVLRGFFKN 656

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              D A  LF++LR+  V+ID +   TMI    +   V  AK L   + +   +P
Sbjct: 657 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 138/285 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y  V+  + R  + + A   F++M  +G+APD+Y Y  LI  F   G    A   
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + ++  + +  D+V +S++I    KL     A +IF    + G  PD V Y+ +++ +  
Sbjct: 491 ILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCL 550

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  + + M   G++P+ V Y TL+N Y +  +  E LS+F EM +         
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+ID          A   F  M + GI  +  +YN +LR + +   F EAI LF+ ++
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR 670

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              ++ +++T NTMI    ++   E+A +L   +   G+ P  +T
Sbjct: 671 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 2/227 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           IL+ +N   R    +  ++ ++ N+ +  +   A  +FD     G  PD   YS L+  +
Sbjct: 491 ILEIMNNGMRLD--IVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGY 548

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G  + A+     M    +  ++V+Y  L+    K+    + +S+F  +   GI P  
Sbjct: 549 CLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 608

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YN +I+    A     A++   EM E G+  +  +Y+ +L  + +N  F EA+ +F E
Sbjct: 609 ILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKE 668

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           +  +N  +D+ T N MI    Q    ++A  LF S+ + G+ P VV+
Sbjct: 669 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 231/457 (50%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P VF+  ++L+ +    R+++  EL H + D+ R  G APD  +Y+T+I  F KEG  D 
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADD-RGGGSAPDVVSYTTVINGFFKEGDSDK 214

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M   R+S D+V YS++I    K     KA+ + + +  +G++P+ + YN++++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  ++  KEA   +++MR  GV+PD V+Y++L++   +N +  EA  +F  M +     
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   ++  Y       +   L   M + GI P    +N L+  Y + E   EA+ +F
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M++  +  NVVTY  +I I  KS   + A    ++M + G+ PN I Y+++I      
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K D+A  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +PN I  
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EAT +    F  G   D   +  +I  + R  +  + + +F++M S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  P+     ++L      R    A +LY  + + G
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y  V+    +    + A+  + EM  R I+PD  TYS++I    K    D A+ 
Sbjct: 193 APDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M ++ V  + + Y++++          +AI    +++S G+ PD+V YN++++   
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EAR + + M ++G++PD  +Y TLL  Y      VE  ++   M       D  
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I  Y + +   +A  +F  MR+ G++P+VV+Y  ++ +  ++    +A+  F  M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  N++ Y ++I       + +KA  L+ EM +RGI  N I +++II    K G++
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
             +  LF  +   GV+ + + Y T+I  Y   G +  A +LL  +     +P+ +   T 
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I    R  R+++A  +F++   +G   +I  +  +++     ++ A   E++  +  +G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ PD  TY TL+  +  +G      + 
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  D  +++ LI    K     +A+ +FS+++  G+ P++V Y  +I +  K
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A L  E+M ++G+ P+ + Y++L++      K+ +A  +  EM +    L+   
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I  + +     ++++LF  M ++G+ P+V++Y+TL+  Y  A    EA  L   M 
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y +    + A  L +EM + G+ PN ITY+ I+       +  
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             L + GR +EA  +F      G V D+  +  M E
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 197/441 (44%), Gaps = 12/441 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P  +TY  LI C  + G  D   
Sbjct: 49  SIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGF 107

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     + + ++ L++        S A+ I   R+     +PD+ +   ++  
Sbjct: 108 AALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKG 167

Query: 134 FGKAKLFKEARLLIEEM---REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                  +EA  L+  M   R  G  PD VSY+T++N + +     +A S + EM +   
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + +I    +      A  +  +M K G+ P+ ++YN++L  Y  +E   EAI 
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   +E +VVTYN+++    K+    +A  +   M  RG+EP+  TY T++  + 
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G L     L   +  +G+  D  ++  +I AY +   V  A  +  ++RQ    PN +
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I IL ++G +++A   F Q  D G   +I V+  +I       K+    E+  +M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 427 RSAGYFPDSHIIALVLNSYGK 447
              G   ++     +++S+ K
Sbjct: 468 LDRGICLNTIFFNSIIHSHCK 488



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 87/185 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN++L+ +   ++   A  L+  + + G   +  TY+ ++    K  + D A+ 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M     
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 697

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +  L +E   L   M E G   ++   ++++   ++      A +  + ++E +  L+ +
Sbjct: 698 EQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEAS 757

Query: 196 TCNIM 200
           T +++
Sbjct: 758 TASLL 762


>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 841

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/591 (24%), Positives = 265/591 (44%), Gaps = 56/591 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I +W   +  Y  +V  YN++LR + +A +W     L+DEM ++GI P   TY TL
Sbjct: 168 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS--- 117
           I  + K G+   A+ WL +M +  +  D V    ++++ +K  ++ KA   F +      
Sbjct: 228 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 287

Query: 118 ---SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
              S +      YNTMI+ +GK+   KEA    + M E+G+ P TV+++T++++Y  N +
Sbjct: 288 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQ 347

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           F E  S+   M + +C  D  T NI+I ++ + +  + A   F  M+  G+ P  VSY T
Sbjct: 348 FGEVTSLMKTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRT 406

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY------GKSLEHEKATNLMQ 288
           LL  +    +  EA  L   M   ++E +  T + + ++Y       KS    K  ++  
Sbjct: 407 LLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAG 466

Query: 289 EMQNRGIEPN---------------------------AITYSTIIAIWGKAGKLDRAAML 321
            M + G   N                            + Y+ +I  +G +   ++A  L
Sbjct: 467 NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACEL 526

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F+ + S GV  D   Y T++       +   AK  L ++R+     + IP    I+   +
Sbjct: 527 FESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVK 586

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G++  A  V+++  +     D+ V+G +I  F+        +   E M+ AG   +S I
Sbjct: 587 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVI 646

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGC-------VFSDQVHFQMLSLYGARKDFNMLE 490
              ++  Y K+   + A+ +Y ++    C       V++      M++LY  R      E
Sbjct: 647 YNSLIKLYTKVGYLDEAEAIYRKLL-RSCNETQYPDVYTSNC---MINLYSQRSMVRKAE 702

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
           ++FE +      N+     ++  +Y++  R  +A++I  +M + R     L
Sbjct: 703 AIFESMKQRREANEFTFAMMLC-MYKKNGRFEEATQIAKQMREMRILTDPL 752



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 214/492 (43%), Gaps = 77/492 (15%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + YN ++    ++ Q + A   F  M + GI P   T++T+I  +G  G F    S +
Sbjct: 296 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 355

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M +   + D   Y+ LI L  K +D  +A + F  +K +G+ PD V+Y T++  F   
Sbjct: 356 KTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIR 414

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF---------------------- 175
            + KEA  LI EM +  V+ D  + S L  +Y+E                          
Sbjct: 415 HMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSEGYS 474

Query: 176 ------------VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                        EA  VF    EVN    +   N+MI  YG     + A  LF SM   
Sbjct: 475 ANIDAYGERGYLSEAERVFICCQEVN-KRTVLEYNVMIKAYGISKSCEKACELFESMMSY 533

Query: 224 GIDPSVVSYNTLLRVYGEAEL--------------------------------FGE---A 248
           G+ P   +YNTL+++   A++                                 G+   A
Sbjct: 534 GVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 593

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +++ M    IE +VV Y  +I  +  +   ++A + ++ M+  GI  N++ Y+++I +
Sbjct: 594 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKL 653

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEID-PVLYQT--MIVAYERVGLVAHAKRLLHELRQ--- 362
           + K G LD A  +++KL  S  E   P +Y +  MI  Y +  +V  A+ +   ++Q   
Sbjct: 654 YTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQRRE 713

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N       + +  + GR EEAT + +Q  +   + D   +  ++ L++ + ++   +E 
Sbjct: 714 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVET 773

Query: 423 FEKMRSAGYFPD 434
           F++M S+G  PD
Sbjct: 774 FKEMVSSGIQPD 785



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 169/349 (48%), Gaps = 41/349 (11%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YNV+++    +K  E A  LF+ M   G+ PD+ TY+TL+       M D A  +L
Sbjct: 503 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 562

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M +     D + Y  +I    KL   + A  ++  +    I PD+V Y  +IN F   
Sbjct: 563 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 622

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----NEVNCPLD 193
              ++A   +E M+E G+  ++V Y++L+ LY +     EA +++ ++    NE   P D
Sbjct: 623 GNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYP-D 681

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N MI++Y Q  M + A+ +F SM+                                
Sbjct: 682 VYTSNCMINLYSQRSMVRKAEAIFESMK-------------------------------- 709

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             QR+  E N  T+  M+ +Y K+   E+AT + ++M+   I  + ++Y++++ ++   G
Sbjct: 710 --QRR--EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDG 765

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +   A   F+++ SSG++ D   ++++     ++G+   A R + E+R+
Sbjct: 766 RFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEIRK 814



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 4/256 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y      Y  V+ + ++  Q  +A  ++ EM +  I PD   Y  LI  F   G   
Sbjct: 567 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 626

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG---IVPDLVAYN 128
            A+S+++ M++  +  + V+Y++LI+L  K+    +A +I+ +L  S      PD+   N
Sbjct: 627 QAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSN 686

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MIN++ +  + ++A  + E M+ Q  + +  +++ +L +Y +N +F EA  +  +M E+
Sbjct: 687 CMINLYSQRSMVRKAEAIFESMK-QRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 745

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D  + N ++ +Y      K+A   F  M   GI P   ++ +L  +  +  +  +A
Sbjct: 746 RILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKA 805

Query: 249 IHLFRLMQRKEIEQNV 264
           +     +++KEI++ +
Sbjct: 806 VRKIEEIRKKEIKRGL 821


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 234/511 (45%), Gaps = 44/511 (8%)

Query: 1   RSVAILDWIN----EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           RS   LD +     E  R SP V ++N V+    +  +   A  LF+EM Q+G+ PD  T
Sbjct: 210 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT 269

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y++++    K    D A   L+QM    V  D V Y+ +I        + ++  +F ++ 
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMT 329

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S G++PD V +++ ++   K    K+A  + + M  +G  PD VSYS LL+ Y    +F 
Sbjct: 330 SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFA 389

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +  ++F  M +     +    NI+I  + +  M  +A  +F  M+  G+ P+VV+Y+TL+
Sbjct: 390 DMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLI 449

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             +       +A+  F  M    IE N   Y+++I  +    +  KA   + EM ++G+ 
Sbjct: 450 SAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH 509

Query: 297 -PNAITYSTII---AIWGK--------------------------------AGKLDRAAM 320
            PN + +S+II    I G+                                 GK+++A  
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILA 376
           +   + S G+E D V   T++  Y + G +       + +LH+  +P T+     +  L 
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           RAGR   A  +F +  D+G   DI  +  +++   RN      I +F K+ +     D  
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           I+  ++N+  K+R  E A+DL++ +   G V
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLV 720



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 26  LRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM--EQ 82
           L+ +  AK+  E    L   M +    PD  +Y+T+I     +     A+  +Q+M  E 
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
            R S D+V ++ +I    K  + SKA ++F+ +   G+VPD+  YN++++   KA+   +
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDK 285

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  ++ +M ++GV+PD V+Y+ +++ Y  +  + E+  +F +M       D  T +  + 
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
              +   +KDA+ +F  M   G  P +VSY+ LL  Y     F +  +LF  M  K I  
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS 405

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           N    N +I  + K    ++A  +  EMQ +G+ PN +TYST+I+ + + G+L  A   F
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-----LRQPNTIPRETAITILAR 377
            ++ S G+E +  +Y ++I  +   G +  AK  + E     L +PN +   + I  L  
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            GR+ +A  VF      G+   I  F  +I+ +    K      V + M S G  PD   
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585

Query: 438 IALVLNSYGKLREFETADDLYSEM 461
              +++ Y K  + +    L+ EM
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREM 609



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 197/453 (43%), Gaps = 31/453 (6%)

Query: 38  AHGLFDEMRQRGI----------------APDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           AH LFDE+ ++G                 APD       ++C     +  +  + + + E
Sbjct: 61  AHHLFDELLRQGTPVHNRSLNDFLAALARAPDS------VSCSNGPALVLALFNRICREE 114

Query: 82  QDRVSGDLVL--YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
                  L +  Y  L++   +        +  +RL  +G+    +   T +     AK 
Sbjct: 115 AGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKR 174

Query: 140 FKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--CPLDLTT 196
             EA  +L+  M E    PD +SY+T++     + +  EAL +   M +    C  D+ +
Sbjct: 175 TDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS 234

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I  + +      A  LF  M + G+ P V +YN+++    +A    +A  + R M 
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +E + VTYN +I  Y  S   +++  + ++M ++G+ P+ +T+S+ ++   K G+  
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A  +FQ + + G   D V Y  ++  Y   G  A    L H +     +     I IL 
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              A+ G ++EA  VF +    G   ++  +  +I  F R  + A+ +E F +M S G  
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P++ +   +++ +    +   A +  SEM  +G
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 36/326 (11%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F EM+ +G+ P+  TYSTLI+ F + G    A+    QM    +  +  +Y +LI    
Sbjct: 429 VFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC 488

Query: 101 KLSDYSKAISIFSRLKSSGI------------------------------------VPDL 124
              D  KA    S + S G+                                     P +
Sbjct: 489 MHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTI 548

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +N++I+ +      ++A  +++ M   G++PD V+ +TL++ Y ++ K  + L +F E
Sbjct: 549 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFRE 608

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M          T NI++D   +      A ++F  M   G    + +Y  LL+     +L
Sbjct: 609 MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 668

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EAI LF  +   + + ++   NTMI    K    E+A +L   +   G+ PN  TY  
Sbjct: 669 TDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 728

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +I    K G ++ A  +F  +  SG 
Sbjct: 729 MIRNLLKEGSVEEADTMFSSMEKSGC 754



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 147/353 (41%), Gaps = 36/353 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y+ ++    R  +   A   F +M   GI P+   Y +LI  F   G    A  +
Sbjct: 440 PNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEF 499

Query: 77  LQQM----------------------------EQDRVS-----GD---LVLYSNLIELAR 100
           + +M                             QD  +     GD   +V +++LI+   
Sbjct: 500 ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYC 559

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            +    KA  +   + S GI PD+V  NT+++ + K+    +  +L  EM  + VKP TV
Sbjct: 560 LVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 619

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+ +L+  +   +   A  +F EM +    +D+ T  I++    + D+  +A  LF  +
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             M     +   NT++    +     EA  LF  +    +  NV TY  MI+   K    
Sbjct: 680 GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           E+A  +   M+  G  P++   + II +  + G + +A     K+  + + ++
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLE 792



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 35/298 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +N ++       + E A G+ D M   GI PD  T +TL++ + K G  D     
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG--- 602

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                       L+L+  ++    K                    P  V YN +++   +
Sbjct: 603 ------------LILFREMLHKKVK--------------------PTTVTYNIVLDGLLR 630

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A+ +  EM + G   D  +Y  LL     N    EA+++F ++  ++C  D+T 
Sbjct: 631 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 690

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MI+   ++   ++A+ LF ++   G+ P+V +Y  ++R   +     EA  +F  M+
Sbjct: 691 LNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N +I++  +  +  KA   M ++    I   A T S +++++   GK
Sbjct: 751 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 91/191 (47%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+   YN+VL  +LRA +   A  +F EM   G A D  TY  L+    +  + D A
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I+   ++       D+ + + +I    K+    +A  +F+ + +SG+VP++  Y  MI  
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    +EA  +   M + G  P +   + ++ + ++    V+A    ++++     L+
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLE 792

Query: 194 LTTCNIMIDVY 204
            +T ++++ ++
Sbjct: 793 ASTTSLLMSLF 803


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 218/455 (47%), Gaps = 5/455 (1%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           SP++  YNV+L    +  + W    GL DEMR  G+  D +T ST+I+  G+EG+ D A 
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  +++ +        Y++L+++  K   YS+A+SI   ++ +   PDLV YN ++  +
Sbjct: 301 KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY 360

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A   +E    I+ M  +G+ P+ ++Y+T++N Y +  K  +ALS F +M E  C  ++
Sbjct: 361 VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNV 420

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++ + G+    ++   +   MR  G  P+ V++NT+L + G   +      +FR 
Sbjct: 421 CTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+    E N  T+N +I  YG+         + +EM   G  P   TY+ ++    + G 
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGD 540

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            + A  +   ++S G + +   Y  M+  Y + G     +++  E+   +  P    +  
Sbjct: 541 WEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRT 600

Query: 375 LARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L  A     A     +AF      G   D+ +F  M+ +F++NK Y    E+   +R +G
Sbjct: 601 LVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG 660

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD      +++ Y +  E    +++   +Q+ G
Sbjct: 661 LQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSG 695



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 187/393 (47%), Gaps = 5/393 (1%)

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           ++   G+E     A+  L ++  +  S D+  ++ ++    ++  Y +AI++F +++ +G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239

Query: 120 IVPDLVAYNTMINVFGK-AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           + P LV YN M++V+GK  + + +   L++EMR  G++ D  + ST+++         EA
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEA 299

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
              FA +          T N ++ V+G+  +  +A  +   M K    P +V+YN L+  
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAA 359

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           Y  A    E       M RK I  N +TY T+I  YGK+ + +KA +  ++M+  G  PN
Sbjct: 360 YVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ I+ + GK  +L+    +   +RS+G   + V + TM+      G+  +  R+  
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFR 479

Query: 359 ELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E++    +PN       I    R G   +   ++ +   AG    ++ +  ++   +R  
Sbjct: 480 EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            +     V   M+S G+ P+    +L+LN Y K
Sbjct: 540 DWEAAESVILDMKSKGFKPNETSYSLMLNCYAK 572



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/498 (23%), Positives = 216/498 (43%), Gaps = 43/498 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y    F YN +L+   +A  +  A  +  EM +    PD  TY+ L+  + + G  +   
Sbjct: 311 YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGA 370

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            ++  M +  +  + + Y+ +I    K     KA+S F ++K SG VP++  YN ++ + 
Sbjct: 371 DFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGML 430

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVNCPL 192
           GK    +E   ++ +MR  G  P++V+++T+L +      HK+V    VF EM       
Sbjct: 431 GKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN--RVFREMKSCGFEP 488

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T N +I  YG+     D  +++  M K G  P V +YN LL        +  A  + 
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKS--------LEHE---------------------KA 283
             M+ K  + N  +Y+ M+  Y K         +E E                     K 
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608

Query: 284 TNLM------QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
             LM      QE    G +P+ + ++++++I+ K    DRA  + + +R SG++ D V Y
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            +++  Y R G     + +L  ++    +P+ +   T I    R G ++EA     +   
Sbjct: 669 NSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTI 728

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G    I  +   +  +S    ++ V EV   M      P+     +V++ Y K ++++ 
Sbjct: 729 SGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKE 788

Query: 454 ADDLYSEMQEEGCVFSDQ 471
           A D  S + E    F DQ
Sbjct: 789 AMDFVSNITEMDKSFDDQ 806



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 26/376 (6%)

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--WSMRK 222
           +LNLY  N K                 +D     +M+ + G+      A RL    S+ +
Sbjct: 162 ILNLYSRNEK-----------------IDNQLVELMVRILGRESQHSVALRLLDEISVEE 204

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK-SLEHE 281
             +D  V ++ T+L  Y     +  AI +F  M++  +   +VTYN M+ +YGK      
Sbjct: 205 YSLD--VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWN 262

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           K   L+ EM++ G+E +  T ST+I+  G+ G LD A   F +L+S G       Y +++
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + + G+ + A  +L E+ + N  P        +    RAG  EE           G +
Sbjct: 323 QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIM 382

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  +I  + +  K    +  F +M+ +G  P+      +L   GK    E   D+
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             +M+  GC  +      ML++ G +     +  +F  + S      ++  + + G Y R
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGR 502

Query: 518 ANRLNDASRIMNRMNK 533
                D  ++   M K
Sbjct: 503 CGSQIDVVKMYEEMIK 518



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 35/182 (19%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P +  YN ++    R  +      +   +++ G  PD  +Y+T+I  F ++G+  
Sbjct: 658 ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQ 717

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI  L +M                                     SGI P +V YNT +
Sbjct: 718 EAIRTLSEM-----------------------------------TISGIRPCIVTYNTFV 742

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             +    +F E   +I  M +   +P+ ++Y  +++ Y +  K+ EA+   + + E++  
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802

Query: 192 LD 193
            D
Sbjct: 803 FD 804


>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
 gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
          Length = 773

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 245/520 (47%), Gaps = 13/520 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           ++++ R       W  A  LF  M RQ+   P  + Y+ +I   G+EG+ +      + M
Sbjct: 49  FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            ++ V  ++  ++ LI    +   Y  ++ + +R+K   + P+L+ YNT++N   K  L 
Sbjct: 109 PENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLD 168

Query: 141 KEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            E  L L  +MR +G++PD ++Y+TLL+         +A  VF  MNE     D  T   
Sbjct: 169 WEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKS 228

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++D +   +     + L   M   G  P +  YN+L+  Y +A     A  +F+ MQR  
Sbjct: 229 LVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGG 288

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +V TY+T+++IYG     E+  +L  +M+     P   TY+++I ++G+ G    + 
Sbjct: 289 CAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESI 348

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL-LHELRQPNTIPRETAITILARA 378
            LF  +  SGV+ D   Y  ++    R GL   A ++  H L   +T   E +  +++  
Sbjct: 349 NLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSY 408

Query: 379 GRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           G++   ++A   + +  +AG    +S +  +I+ +++   Y         M  AG+    
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPV 468

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
             +  V+ +Y K+   + A + +SE+Q+ EG    ++ H  +L +Y    D  +LE   E
Sbjct: 469 SSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYC---DMGLLEEAKE 525

Query: 495 R---LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +   S +    ++ ++  +  R ++ + A+++++ M
Sbjct: 526 EFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEM 565



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 256/523 (48%), Gaps = 17/523 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +  ++  +    P+   Y +++  + R    E    +F++M +  +  + Y ++ L
Sbjct: 64  RALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTAL 123

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSG 119
           I  +G+ G +++++  L +M+++RV  +L+ Y+ ++    K   D+   +++F++++  G
Sbjct: 124 INAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEG 183

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PDL+ YNT+++      L ++A ++ + M E GV  D V+Y +L++ +  +++     
Sbjct: 184 IQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVE 243

Query: 180 SVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            +  EM +E N P D+   N +I+ Y        A  +F  M++ G  P V +Y+TLLR+
Sbjct: 244 ELLREMEDEGNSP-DIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRI 302

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG    F +   LF  M+       V TYN++I+++G+    +++ NL  +M + G++P+
Sbjct: 303 YGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPD 362

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT--MIVAYERVGLVAHAKRL 356
             TYS ++++ G+ G    AA + Q + ++  E  P L  +  +I +Y ++ +   A   
Sbjct: 363 DATYSALLSVCGRGGLTREAAKIHQHMLTN--ESTPSLEASAGLISSYGKMAMYKDALVS 420

Query: 357 LHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
            + +R+    P+ +A   L    A+ G   EA         AG    +S    ++E +S+
Sbjct: 421 YYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSK 480

Query: 413 NKKYANVIEVFEKMRSA-GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
              +   +E F +++   G   D      +L  Y  +   E A + +  ++E   V   +
Sbjct: 481 VGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGAR 540

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
           V+  +LSL   R  ++    L      D  I    LH VV GI
Sbjct: 541 VYCLLLSLCVRRSKWDYATQLL-----DEMIAAGGLHQVVVGI 578



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 22/471 (4%)

Query: 14  RYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R  P++  YN VL    +    WE    LF +MR  GI PD  TY+TL++     G+ + 
Sbjct: 147 RVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQ 206

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    + M +  V  D V Y +L++     +   +   +   ++  G  PD+  YN++I 
Sbjct: 207 AAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIE 266

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  A     A  + ++M+  G  PD  +YSTLL +Y     F +  S+F++M E++ P 
Sbjct: 267 AYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPP 326

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            + T N +I V+G+    +++  LF  M   G+ P   +Y+ LL V G   L  EA  + 
Sbjct: 327 TVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIH 386

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M   E   ++     +I  YGK   ++ A      ++  G++P    Y  +I  + K 
Sbjct: 387 QHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKG 446

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-----NTIP 367
           G    A      +  +G +       +++ AY +VGL   A     EL+Q      +   
Sbjct: 447 GLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERT 506

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            ET + +    G +EEA   F    +  +V    V+  ++ L  R  K+    ++ ++M 
Sbjct: 507 HETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQLLDEMI 566

Query: 428 SAGYFPDSHIIALVLNSYG---------------KLREFETADDLYSEMQE 463
           +AG      ++ +V  +Y                KLR+ E + D Y+ + E
Sbjct: 567 AAGGL-HQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVE 616



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 37/325 (11%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P+V  YN +++       ++ +  LF +M   G+ PD  TYS L++  G+ G+ 
Sbjct: 320 KELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLT 379

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    Q M  +  +  L   + LI    K++ Y  A+  + R++ +G+ P + AY+ +
Sbjct: 380 REAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDAL 439

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-N 189
           I  + K  L+ EA   +  M + G +    S ++++  Y +     EAL  F+E+ +   
Sbjct: 440 IQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEG 499

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV--------YGE 241
             +D  T   ++ VY  + + ++A   F  +++    P    Y  LL +        Y  
Sbjct: 500 SEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYA- 558

Query: 242 AELFGEAI---------------------------HLFRLMQRKEIEQNVVTYNTMIKIY 274
            +L  E I                           + F  ++ +++E+++  YN ++++ 
Sbjct: 559 TQLLDEMIAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVELL 618

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNA 299
               +  +A  ++ +   RG  P A
Sbjct: 619 VYCNQKARAARVLADAMQRGAFPEA 643


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 218/455 (47%), Gaps = 5/455 (1%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           SP++  YNV+L    +  + W    GL DEMR  G+  D +T ST+I+  G+EG+ D A 
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  +++ +        Y++L+++  K   YS+A+SI   ++ +   PDLV YN ++  +
Sbjct: 301 KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY 360

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A   +E    I+ M  +G+ P+ ++Y+T++N Y +  K  +ALS F +M E  C  ++
Sbjct: 361 VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNV 420

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++ + G+    ++   +   MR  G  P+ V++NT+L + G   +      +FR 
Sbjct: 421 CTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+    E N  T+N +I  YG+         + +EM   G  P   TY+ ++    + G 
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGD 540

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            + A  +   ++S G + +   Y  M+  Y + G     +++  E+   +  P    +  
Sbjct: 541 WEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRT 600

Query: 375 LARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L  A     A     +AF      G   D+ +F  M+ +F++NK Y    E+   +R +G
Sbjct: 601 LVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG 660

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD      +++ Y +  E    +++   +Q+ G
Sbjct: 661 LQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSG 695



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 187/393 (47%), Gaps = 5/393 (1%)

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           ++   G+E     A+  L ++  +  S D+  ++ ++    ++  Y +AI++F +++ +G
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTG 239

Query: 120 IVPDLVAYNTMINVFGK-AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           + P LV YN M++V+GK  + + +   L++EMR  G++ D  + ST+++         EA
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEA 299

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
              FA +          T N ++ V+G+  +  +A  +   M K    P +V+YN L+  
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAA 359

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           Y  A    E       M RK I  N +TY T+I  YGK+ + +KA +  ++M+  G  PN
Sbjct: 360 YVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ I+ + GK  +L+    +   +RS+G   + V + TM+      G+  +  R+  
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFR 479

Query: 359 ELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E++    +PN       I    R G   +   ++ +   AG    ++ +  ++   +R  
Sbjct: 480 EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            +     V   M+S G+ P+    +L+LN Y K
Sbjct: 540 DWEAAESVILDMKSKGFKPNETSYSLMLNCYAK 572



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/498 (23%), Positives = 216/498 (43%), Gaps = 43/498 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y    F YN +L+   +A  +  A  +  EM +    PD  TY+ L+  + + G  +   
Sbjct: 311 YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGA 370

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            ++  M +  +  + + Y+ +I    K     KA+S F ++K SG VP++  YN ++ + 
Sbjct: 371 DFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGML 430

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVNCPL 192
           GK    +E   ++ +MR  G  P++V+++T+L +      HK+V    VF EM       
Sbjct: 431 GKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN--RVFREMKSCGFEP 488

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T N +I  YG+     D  +++  M K G  P V +YN LL        +  A  + 
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKS--------LEHE---------------------KA 283
             M+ K  + N  +Y+ M+  Y K         +E E                     K 
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608

Query: 284 TNLM------QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
             LM      QE    G +P+ + ++++++I+ K    DRA  + + +R SG++ D V Y
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            +++  Y R G     + +L  ++    +P+ +   T I    R G ++EA     +   
Sbjct: 669 NSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTI 728

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G    I  +   +  +S    ++ V EV   M      P+     +V++ Y K ++++ 
Sbjct: 729 SGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKE 788

Query: 454 ADDLYSEMQEEGCVFSDQ 471
           A D  S + E    F DQ
Sbjct: 789 AMDFVSNITEMDKSFDDQ 806



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 26/376 (6%)

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--WSMRK 222
           +LNLY  N K                 +D     +M+ + G+      A RL    S+ +
Sbjct: 162 ILNLYSRNEK-----------------IDNQLVELMVRILGRESQHSVALRLLDEISVEE 204

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK-SLEHE 281
             +D  V ++ T+L  Y     +  AI +F  M++  +   +VTYN M+ +YGK      
Sbjct: 205 YSLD--VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWN 262

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           K   L+ EM++ G+E +  T ST+I+  G+ G LD A   F +L+S G       Y +++
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + + G+ + A  +L E+ + N  P        +    RAG  EE           G +
Sbjct: 323 QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIM 382

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  +I  + +  K    +  F +M+ +G  P+      +L   GK    E   D+
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDM 442

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             +M+  GC  +      ML++ G +     +  +F  + S      ++  + + G Y R
Sbjct: 443 LCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGR 502

Query: 518 ANRLNDASRIMNRMNK 533
                D  ++   M K
Sbjct: 503 CGSQIDVVKMYEEMIK 518



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 35/182 (19%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P +  YN ++    R  +      +   +++ G  PD  +Y+T+I  F ++G+  
Sbjct: 658 ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQ 717

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI  L +M                                     SGI P +V YNT +
Sbjct: 718 EAIRTLSEM-----------------------------------TISGIRPCIVTYNTFV 742

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             +    +F E   +I  M +   +P+ ++Y  +++ Y +  K+ EA+   + + E++  
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802

Query: 192 LD 193
            D
Sbjct: 803 FD 804


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 214/465 (46%), Gaps = 4/465 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  YN ++    R    E A  L D M  +G+ P  +TY+ +I    K G +
Sbjct: 385 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 444

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L +M +  +S D   Y+ L+    +  +   A  IF  + S G+VPDLV+++ +
Sbjct: 445 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 504

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I +  K     +A     +M+  G+ PD V Y+ L+  +  N    EAL V  EM E  C
Sbjct: 505 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 564

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD+ T N +++   +  M  +AD LF  M + G+ P   ++ TL+  Y +     +A+ 
Sbjct: 565 XLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVT 624

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF +M ++ ++ +VVTYNT+I  + K  E EK   L  +M +R I PN I+Y  +I  + 
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G +  A  L+ ++   G E   +   T++  Y R G    A   L  +      P+ I
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +   ++ A  +  +  ++G + D+  +  ++  FSR  +      +  KM
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
              G  PD      ++N +      + A  ++ EM + G V  D+
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 234/524 (44%), Gaps = 10/524 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+ A N +L  +++    +LA  ++ E+ + G+  + YT + +I    K    ++  S+L
Sbjct: 322 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 381

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             ME+  V  D+V Y+ LI    +     +A  +   +   G+ P +  YN +IN   K 
Sbjct: 382 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 441

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             +  A+ +++EM + G+ PDT +Y+ LL     N   ++A  +F EM       DL + 
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 501

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I +  +      A + F  M+  G+ P  V Y  L+  +    +  EA+ +   M  
Sbjct: 502 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 561

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    +VVTYNT++    K     +A  L  EM  RG+ P+  T++T+I  + K G +++
Sbjct: 562 QGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNK 621

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  LF+ +    ++ D V Y T+I  + +   +     L +++      PN I     I 
Sbjct: 622 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 681

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                G + EA  ++ +  + G    I     +++ + R        E    M   G  P
Sbjct: 682 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 741

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES-- 491
           D      ++N + K    + A  L ++M+  G +  D + + ++ L G  +   M E+  
Sbjct: 742 DGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVI-LNGFSRQGRMQEAEL 799

Query: 492 -LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            + + ++   N ++     ++ G +   N L +A R+ + M +R
Sbjct: 800 IMLKMIERGVNPDRSTYTSLING-HVTQNNLKEAFRVHDEMLQR 842



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 4/341 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + ++ ++  + +A+  +E       ++ +G+     + ++LL   V+      A  ++ E
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +      +++ T NIMI+   +    ++       M + G+ P VV+YNTL+  Y    L
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  L   M  K ++  V TYN +I    K+ ++ +A  ++ EM   G+ P+  TY+ 
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    +   +  A  +F ++ S GV  D V +  +I    + G +  A +   +++   
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P     TIL     R G + EA  V  +  + G   D+  +  ++    + K  +   
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           E+F +M   G FPD +    ++N Y K      A  L+  M
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/219 (19%), Positives = 96/219 (43%), Gaps = 5/219 (2%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           N + ++ +++ Y ++ +  +     + ++++G+  +    ++++    K G +D A  ++
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           Q++  SGV+++      MI A  +   + + K  L ++ +    P+ +   T I    R 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +EEA  +       G    +  +  +I    +  KY     V ++M   G  PD+   
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            ++L    +      A+ ++ EM  +G V  D V F  L
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSAL 504


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 234/476 (49%), Gaps = 37/476 (7%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  + ELA G+F+     G     + +S LI+ +GK G FD AI   + M+   +  +LV
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLV 258

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ +I+   K   ++ + + IF  +  +G+ PD + YN+++ V  +  L++ AR L  E
Sbjct: 259 TYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNE 318

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M ++G+  D  +Y+TLL+   +  +   A  +  EM       ++ T + M D Y +   
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGR 378

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +DA  L+  M+ +GI    VSYNTLL +Y +   F +A+ + + M    ++++VVTYN 
Sbjct: 379 LEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK  +  + T + +EM+   + PN +TYST+I ++ K    + A  +F++ + +G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG------ 379
           ++ D VLY  +I A  + GLV  A  LL E+ +    PN +   + I    R+       
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558

Query: 380 ---------RIEEATWVFRQAFDAGEVK--DISVFGCMIELFSRNKKYA----------- 417
                    + E  T++  +  D  E+   D  VF    +L S  +  A           
Sbjct: 559 DGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIR 618

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           +++ VF+KM      P+    + +LN+  + +  E A  L  E++    +F +QV+
Sbjct: 619 SILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELR----LFDNQVY 670



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 166/297 (55%), Gaps = 1/297 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN V+    +   +++    +F+EM + G+ PDR TY++L+    + G++++A +
Sbjct: 255 PNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    +  D+  Y+ L++   K      A  I   +    I+P++V Y+TM + + 
Sbjct: 315 LFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   ++A  L  EM+  G+  D VSY+TLL++Y +  +F +AL V  EM       D+ 
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D YG+     +  R+F  M+K  + P++++Y+TL+ VY +  L+ EA+ +FR  
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           ++  ++ +VV Y+ +I    K+   + A  L+ EM   GI PN +TY++II  +G++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 28/373 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L    R   WE A  LF+EM  RGI  D +TY+TL+    K G  D A   
Sbjct: 291 PDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEI 350

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M   ++  ++V YS + +   K      A+++++ +K  GI  D V+YNT+++++ K
Sbjct: 351 MLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAK 410

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F++A  + +EM   GVK D V+Y+ LL+ Y +  KF E   VF EM +     +L T
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +IDVY +  + ++A  +F   ++ G+   VV Y+ L+    +  L   A+ L   M 
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHE------KATNLMQE-----MQNRGIEPNAIT---- 301
           ++ I  NVVTYN++I  +G+S   E       A+N  Q      M   G++ + I     
Sbjct: 531 KEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDG 590

Query: 302 -----YSTIIAIWGKAGKLDRAAM--------LFQKLRSSGVEIDPVLYQTMIVAYERVG 348
                Y  +++      K +R           +F+K+    ++ + V +  ++ A  R  
Sbjct: 591 HVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCK 650

Query: 349 LVAHAKRLLHELR 361
            +  A  LL ELR
Sbjct: 651 SIEDASMLLEELR 663



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 5/362 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L     A  +F    S G    + A++ +I+ +GK+  F EA  + E M
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           +  G+KP+ V+Y+ +++   +   +F   + +F EM       D  T N ++ V  +  +
Sbjct: 249 KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGL 308

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  LF  M   GID  V +YNTLL    +      A  +   M  K+I  NVVTY+T
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M   Y K+   E A NL  EM+  GI  + ++Y+T+++I+ K G+ + A  + +++ SSG
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           V+ D V Y  ++  Y + G      R+  E+++    PN +   T I + ++    EEA 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VFR+   AG   D+ ++  +I    +N    + + + ++M   G  P+      +++++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548

Query: 446 GK 447
           G+
Sbjct: 549 GR 550



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 180/376 (47%), Gaps = 38/376 (10%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VF YN +L  V +  Q +LA+ +  EM  + I P+  TYST+   + K G  + A++   
Sbjct: 328 VFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYN 387

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+   +  D V Y+ L+ +  KL  +  A+ +   + SSG+  D+V YN +++ +GK  
Sbjct: 388 EMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQG 447

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F E   + +EM++  V P+ ++YSTL+++Y +   + EA+ VF E  +     D+   +
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYS 507

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG------------------ 240
            +I+   +  +   A  L   M K GI P+VV+YN+++  +G                  
Sbjct: 508 ELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNER 567

Query: 241 --------------EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                         E+E+  +  H+F+  Q+   E+        +   GK  E     ++
Sbjct: 568 QSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERL---GKE-EIRSILSV 623

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            ++M    I+PN +T+S I+    +   ++ A+ML ++LR    ++  V +  ++   E 
Sbjct: 624 FKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSEN 683

Query: 347 VGLVAHAKRLLHELRQ 362
           V +   A+ L  E++Q
Sbjct: 684 VWI--QAQYLFDEVKQ 697



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI   G+L   + A  +F +    G   +V +++ L+  YG++  F EAI +F  M+   
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 260 IEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           ++ N+VTYN +I   GK  +E ++   + +EM   G++P+ ITY++++A+  + G  + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF ++   G++ D   Y T++ A  + G +  A  ++ E+      PN +   T    
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+AGR+E+A  ++ +    G   D   +  ++ ++++  ++ + ++V ++M S+G   D
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEE 464
                 +L+ YGK  +F     ++ EM+++
Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 7/318 (2%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN--VVTYNTMIKIYGKSLEHEKATNLMQE 289
           Y  LLR  G      +AI  F     +E  +N      + MI   G+  + E A  + + 
Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             + G       +S +I+ +GK+G  D A  +F+ ++ SG++ + V Y  +I A  + G+
Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272

Query: 350 -----VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
                V   + +L    QP+ I   + + + +R G  E A  +F +  D G  +D+  + 
Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +++   +  +     E+  +M      P+    + + + Y K    E A +LY+EM+  
Sbjct: 333 TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G       +  +LS+Y     F     + + + S         ++ +   Y +  + N+ 
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452

Query: 525 SRIMNRMNKRRTFNSSLV 542
           +R+   M K R F + L 
Sbjct: 453 TRVFKEMKKDRVFPNLLT 470



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P++  Y+ ++    +   +E A  +F E +Q G+  D   YS LI    K G+ DSA
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIE 97
           +  L +M ++ +  ++V Y+++I+
Sbjct: 523 VLLLDEMTKEGIRPNVVTYNSIID 546


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 214/465 (46%), Gaps = 4/465 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  YN ++    R    E A  L D M  +G+ P  +TY+ +I    K G +
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L +M +  +S D   Y+ L+    +  +   A  IF  + S G+VPDLV+++ +
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 243

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I +  K     +A     +M+  G+ PD V Y+ L+  +  N    EAL V  EM E  C
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD+ T N +++   +  M  +AD LF  M + G+ P   ++ TL+  Y +     +A+ 
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF +M ++ ++ +VVTYNT+I  + K  E EK   L  +M +R I PN I+Y  +I  + 
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
             G +  A  L+ ++   G E   +   T++  Y R G    A   L  +      P+ I
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +   ++ A  +  +  ++G + D+  +  ++  FSR  +      +  KM
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
              G  PD      ++N +      + A  ++ EM + G V  D+
Sbjct: 544 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 234/524 (44%), Gaps = 10/524 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+ A N +L  +++    +LA  ++ E+ + G+  + YT + +I    K    ++  S+L
Sbjct: 61  SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             ME+  V  D+V Y+ LI    +     +A  +   +   G+ P +  YN +IN   K 
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 180

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             +  A+ +++EM + G+ PDT +Y+ LL     N   ++A  +F EM       DL + 
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 240

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I +  +      A + F  M+  G+ P  V Y  L+  +    +  EA+ +   M  
Sbjct: 241 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    +VVTYNT++    K     +A  L  EM  RG+ P+  T++T+I  + K G +++
Sbjct: 301 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 360

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  LF+ +    ++ D V Y T+I  + +   +     L +++      PN I     I 
Sbjct: 361 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 420

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                G + EA  ++ +  + G    I     +++ + R        E    M   G  P
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 480

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES-- 491
           D      ++N + K    + A  L ++M+  G +  D + + ++ L G  +   M E+  
Sbjct: 481 DGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVI-LNGFSRQGRMQEAEL 538

Query: 492 -LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            + + ++   N ++     ++ G +   N L +A R+ + M +R
Sbjct: 539 IMLKMIERGVNPDRSTYTSLING-HVTQNNLKEAFRVHDEMLQR 581



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 4/341 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + ++ ++  + +A+  +E       ++ +G+     + ++LL   V+      A  ++ E
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +      +++ T NIMI+   +    ++       M + G+ P VV+YNTL+  Y    L
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  L   M  K ++  V TYN +I    K+ ++ +A  ++ EM   G+ P+  TY+ 
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    +   +  A  +F ++ S GV  D V +  +I    + G +  A +   +++   
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P     TIL     R G + EA  V  +  + G V D+  +  ++    + K  +   
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           E+F +M   G FPD +    ++N Y K      A  L+  M
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/220 (19%), Positives = 96/220 (43%), Gaps = 5/220 (2%)

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N + ++ +++ Y ++ +  +     + ++++G+  +    ++++    K G +D A  +
Sbjct: 25  SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           +Q++  SGV+++      MI A  +   + + K  L ++ +    P+ +   T I    R
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G +EEA  +       G    +  +  +I    +  KY     V ++M   G  PD+  
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             ++L    +      A+ ++ EM  +G V  D V F  L
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSAL 243


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 217/429 (50%), Gaps = 10/429 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y+ V+       + + A  L D+M+ +G+ P+RYTY+++I    K G    A  
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M   ++  D V+Y+ LI    KL     A   F  + S  I PD + Y T+I  FG
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     E + L  EM  +G+KPD V+Y+TL+++Y +  + V A S+  EM ++    ++ 
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469

Query: 196 TCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +ID    +G+LD    A+ L   MRK G+  +V  YN+++    +A    +AI L 
Sbjct: 470 TYGALIDGLCKHGELD---TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M+   I+ + +TY T+I  Y +  + +KA  L+QEM +RG++P  +T++ ++  +   
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G L+    L   +   G+  D + Y T++  +     +    ++   +R     P     
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            IL     +A  ++EA +++++  + G V  ++ +  +I+ F + KK     E+FE+MR 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706

Query: 429 AGYFPDSHI 437
            G   D  I
Sbjct: 707 HGLVADGEI 715



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 224/457 (49%), Gaps = 4/457 (0%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN+++ ++ R  + + AH L  +M  R   PD  +YST+I  +   G    A+  +  M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +   +  +   Y+++I L  K+    +A  +   + S  I+PD V Y T+I+ F K    
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           + A    +EM  + + PD ++Y+TL+  + +  K +E  ++F EM       D  T   +
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           IDVY +     +A  L   M +MG+ P++V+Y  L+    +      A  L   M++K +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + NV  YN+M+    K+   E+A  LM+EM+  GI+P+AITY+T+I  + + G +D+A  
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L Q++   G++   V +  ++  +  +G++    RLL  + +   +P       L +   
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619

Query: 381 IEEA----TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           I  +    T ++++  + G   D + +  +I+   + +       ++++M   GY P   
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
               ++  + K ++   A +L+ EM+  G V   +++
Sbjct: 680 SYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIY 716



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 227/481 (47%), Gaps = 13/481 (2%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E+A  +F E    GI+ +  +Y+ +I    + G    A   L QM+    + D+V YS +
Sbjct: 243 EMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+    L +  KA+ +   ++  G+ P+   YN++I +  K     EA  ++ EM  Q +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            PD V Y+TL++ + +      A   F EM       D  T   +I  +GQ     +   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL---MQRKEIEQNVVTYNTMIK 272
           LF  M   G+ P  V+Y TL+ VY +A   GE ++ F L   M +  +  N+VTY  +I 
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKA---GEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              K  E + A  L+ EM+ +G++ N   Y++++    KAG +++A  L +++  +G++ 
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP 536

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVF 388
           D + Y T+I AY R+G +  A +LL E+     QP  +     +      G +E+   + 
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
               + G V D   +  +++            +++++MR+ G  PDS+   +++  + K 
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
           R  + A  LY EM E+G V +   +  ++  +  +K       LFE +     +   E++
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIY 716

Query: 509 H 509
           +
Sbjct: 717 N 717



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 171/341 (50%), Gaps = 3/341 (0%)

Query: 8   WINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           W +E    + SP    Y  +++   +  +      LF EM  RG+ PD  TY+TLI  + 
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G   +A S   +M Q  ++ ++V Y  LI+   K  +   A  +   ++  G+  ++ 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN+M+N   KA   ++A  L++EM   G+ PD ++Y+T+++ Y       +A  +  EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +      + T N++++ +  L M +D DRL   M + GI P  ++YNTL++ +      
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
                +++ M+ + +  +  TYN +IK + K+   ++A  L +EM  +G  P   +Y+ +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI-VAYE 345
           I  + K  K+  A  LF+++R  G+  D  +Y   + + YE
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYE 725


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 214/465 (46%), Gaps = 4/465 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  YN ++    R    E A  L D M  +G+ P  +TY+ +I    K G +
Sbjct: 281 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 340

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L +M +  +S D   Y+ L+    +  +   A  IF  + S G+VPDLV+++ +
Sbjct: 341 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 400

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I +  K     +A     +M+  G+ PD V Y+ L+  +  N    EAL V  EM E  C
Sbjct: 401 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD+ T N +++   +  M  +AD LF  M + G+ P   ++ TL+  Y +     +A+ 
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 520

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF +M ++ ++ +VVTYNT+I  + K  E EK   L  +M +R I PN I+Y  +I  + 
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G +  A  L+ ++   G E   +   T++  Y R G    A   L  +      P+ I
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +   ++ A  +  +  ++G + D+  +  ++  FSR  +      +  KM
Sbjct: 641 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
              G  PD      ++N +      + A  ++ EM + G V  D+
Sbjct: 701 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 234/524 (44%), Gaps = 10/524 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+ A N +L  +++    +LA  ++ E+ + G+  + YT + +I    K    ++  S+L
Sbjct: 218 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 277

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             ME+  V  D+V Y+ LI    +     +A  +   +   G+ P +  YN +IN   K 
Sbjct: 278 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 337

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             +  A+ +++EM + G+ PDT +Y+ LL     N   ++A  +F EM       DL + 
Sbjct: 338 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 397

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I +  +      A + F  M+  G+ P  V Y  L+  +    +  EA+ +   M  
Sbjct: 398 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    +VVTYNT++    K     +A  L  EM  RG+ P+  T++T+I  + K G +++
Sbjct: 458 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 517

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  LF+ +    ++ D V Y T+I  + +   +     L +++      PN I     I 
Sbjct: 518 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 577

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                G + EA  ++ +  + G    I     +++ + R        E    M   G  P
Sbjct: 578 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 637

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES-- 491
           D      ++N + K    + A  L ++M+  G +  D + + ++ L G  +   M E+  
Sbjct: 638 DGITYNTLINGFIKEENMDRAFALVNKMENSG-LLPDVITYNVI-LNGFSRQGRMQEAEL 695

Query: 492 -LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            + + ++   N ++     ++ G +   N L +A R+ + M +R
Sbjct: 696 IMLKMIERGVNPDRSTYTSLING-HVTQNNLKEAFRVHDEMLQR 738



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 4/341 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + ++ ++  + +A+  +E       ++ +G+     + ++LL   V+      A  ++ E
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +      +++ T NIMI+   +    ++       M + G+ P VV+YNTL+  Y    L
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  L   M  K ++  V TYN +I    K+ ++ +A  ++ EM   G+ P+  TY+ 
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    +   +  A  +F ++ S GV  D V +  +I    + G +  A +   +++   
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P     TIL     R G + EA  V  +  + G V D+  +  ++    + K  +   
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           E+F +M   G FPD +    ++N Y K      A  L+  M
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/219 (19%), Positives = 96/219 (43%), Gaps = 5/219 (2%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           N + ++ +++ Y ++ +  +     + ++++G+  +    ++++    K G +D A  ++
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           Q++  SGV+++      MI A  +   + + K  L ++ +    P+ +   T I    R 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +EEA  +       G    +  +  +I    +  KY     V ++M   G  PD+   
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            ++L    +      A+ ++ EM  +G V  D V F  L
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSAL 400


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 223/493 (45%), Gaps = 60/493 (12%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V + DW+  +  Y  SVF YN  L  + +A   +LA+  F +M++RG  PD +TYS ++ 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIV 121
              K G  D A   L Q+ +  V  +++ YS +I+   K S    A+ IF  + S  G V
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V +N+++      +   EA +L E M + G +P+ +SYSTLL+   +  +  EA  +
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 182 FAEMNEVNCPLDLT--------------------TC------------------------ 197
           + EM E +C  DL                      C                        
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 198 --------NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                   N MI+   +  M  +A + F  M      PS   +NTL+    +++   + +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 250 HLFRLMQR-KE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            LF+ M+  KE     N+ TYN M+    K+ + ++A  L+ EM N G+ P+ +TYS ++
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
               K GKLDRA  L +++   GV  D     +++ A  + G V +A   L  ++     
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +   T +  L +AGRI+EA     +   A    D+  +  +I    R+ + A    +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 423 FEKMRSAGYFPDS 435
           F++M   G  PD+
Sbjct: 502 FQEMVKRGVLPDT 514



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 142/310 (45%), Gaps = 6/310 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFD 71
           + PS   +N ++  V ++K+      LF  M+        P+  TY+ ++    K    D
Sbjct: 297 HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   + +M    +S D+V YS L++   KL    +A  +   +   G+ PD     +++
Sbjct: 357 EAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASIL 416

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   KA     A   +E M+ +G  PD V+Y+TLL+   +  +  EA++  A+M    C 
Sbjct: 417 NALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCT 476

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ +  I+I    +   A  A  +F  M K G+ P  V Y++LL       L   A+ L
Sbjct: 477 PDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL 536

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            +    K    + V +  ++    K+ + E A  +++ M + G   +A TY ++++   K
Sbjct: 537 LKTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRK 593

Query: 312 AGKLDRAAML 321
            GK+D+A  L
Sbjct: 594 LGKVDKARQL 603


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 227/461 (49%), Gaps = 4/461 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP ++  ++++      ++ +LA  +F +M + G+ PD  T++TLI    K G F
Sbjct: 122 ELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +    E       +  Y+ +I    K+ + + A  +F +++ +G  P++V YN +
Sbjct: 182 AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNIL 241

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K KL  EA  +   M+ + + PD  +Y++L+       ++ EA ++  EM  +N 
Sbjct: 242 IDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T N+++D   +     +A  +F +M +MG++P VV+Y++L+  Y       EA  
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARK 361

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M  K  + +  +YN +IK Y K+   ++A  L  EM ++G+ P+ + Y+T+I    
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           + G+L  A  LF+ + S+G   D   Y  ++  + + G +  A RL   ++    +P+  
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  + + G +++A  +F + F  G + ++ ++  +I    +       +E F  M
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM 541

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
              G  PD     +++  + + ++   A  L  EM++ G V
Sbjct: 542 EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 207/437 (47%), Gaps = 5/437 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA-ISWLQQMEQDRVSGDLVLYSNLIELAR 100
           F+ M  R   P    ++ L++   K G +  A IS  +QME   +S D+   S LI+   
Sbjct: 82  FNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFS 141

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            L     A S+FS++   G+ PD V +NT+IN   K   F +A    ++    G +P   
Sbjct: 142 HLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVY 201

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T++N   +  +   A  +F +M E  C  ++ T NI+ID   +  +  +A  +F  M
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +   I P + +YN+L++       + EA  L   M    I  N+ T+N ++    K  + 
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  + + M   G+EP+ +TYS+++  +    ++  A  LF  + + G + D   Y  +
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +   +  AK+L    +H+   P+ +   T I  L + GR+ EA  +F+     G 
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + D+  +  +++ F +         +F  M+S    PD  +  +++++  K    + A  
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501

Query: 457 LYSEMQEEGCVFSDQVH 473
           L+SE+  +G + + Q++
Sbjct: 502 LFSELFVQGLLPNVQIY 518



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 35/323 (10%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP +F YN +++ +   ++W+ A  L +EM    I P+ +T++ L+    KEG    A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324

Query: 74  ISWLQQMEQDRVSGDLVLYSNL---------IELARKLSD-------------------- 104
               + M +  V  D+V YS+L         I  ARKL D                    
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384

Query: 105 YSKAISI------FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           Y KA  I      F+ +   G+ PD V YNT+I+   +    +EA+ L + M   G  PD
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD 444

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             +YS LL+ + +     +A  +F  M       D+   NI+ID   +    KDA +LF 
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            +   G+ P+V  Y T++    +  L  EA+  FR M+      +  +YN +I+ + +  
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYK 564

Query: 279 EHEKATNLMQEMQNRGIEPNAIT 301
           +  +A  L+ EM++RG    A T
Sbjct: 565 DESRAAQLIGEMRDRGFVAEAGT 587


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 185/331 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  +R    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   +++SG+ PD   YN MI+ FGK
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + MRE+ ++PD V+++TL++ + +  +   A+ +F EM E NCP   TT
Sbjct: 417 YNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTT 476

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +  +  + +   M++ G+ P++++Y TL+ VYG +  + EAI     M+
Sbjct: 477 YNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVV 596

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q ++ +G+  D + Y T++ A  RV
Sbjct: 597 EAFSVLQFMKENGLRPDVITYTTLMKALIRV 627



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 202/457 (44%), Gaps = 32/457 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVA 280

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   ++     A  +   +   G+ PD   Y+ +
Sbjct: 281 EAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLL 340

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM     
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+  I+P VV++NTL+  + +      A+ 
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAME 460

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  ++         
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA-------- 572

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                                 D  EV  I V   +I  F  +++      V + M+  G
Sbjct: 573 ----------------------DGLEVS-ILVLNSLINAFGEDRRVVEAFSVLQFMKENG 609

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             PD      ++ +  ++ +F+    +Y EM   GC 
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCA 646



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 175/367 (47%), Gaps = 5/367 (1%)

Query: 38  AHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           A  LF E    G I P    Y+ L+  + + G   +A   L +M Q  V+ D   YS L+
Sbjct: 282 AEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLV 341

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +   +   +  A  +   +++ G+ P    ++ ++  F     +++A  ++ EM+  GV+
Sbjct: 342 DAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVR 401

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD   Y+ +++ + + +    A+  F  M E     D+ T N +ID + +      A  L
Sbjct: 402 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMEL 461

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F  MR+    P   +YN ++ + GE E +     +   M+ + +  N++TY T++ +YG+
Sbjct: 462 FEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGR 521

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           S  +++A + ++ M+  G++P+   Y  ++  + + G  D A  + + +++ G+E+  ++
Sbjct: 522 SGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILV 581

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAF 392
             ++I A+     V  A  +L  +++    P+ I   T +  L R  + ++   ++ +  
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641

Query: 393 DAGEVKD 399
            +G   D
Sbjct: 642 TSGCAPD 648



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/428 (19%), Positives = 177/428 (41%), Gaps = 35/428 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + S L+    +PDL +Y+ ++      +   +A LL   + ++RE  ++PD   +S L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGE 294

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y        A  +   M +  +  +  TY+ ++  Y ++   E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++++SGV  D   Y  MI  +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA      +R+    P                               D+  + 
Sbjct: 415 GKYNCLGHAMDAFDRMREEEIEP-------------------------------DVVTWN 443

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++   +E+FE+MR +   P +    +++N  G+   +E  + + SEM+E+
Sbjct: 444 TLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQ 503

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G V +   +  ++ +YG    +       E + +D       ++H +   Y +    + A
Sbjct: 504 GLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563

Query: 525 SRIMNRMN 532
             ++  M 
Sbjct: 564 LNVVKAMK 571



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML---FQKLRSSGVEIDPVLYQTMIV 342
           L+  ++     P+  +YS ++A          AA+L      LR S +E D  L+  +I 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      AGR+ EA  +F + F AGE+K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIK 296

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + R     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R D+    ++   + +      +  ++V+   + +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    +RM +
Sbjct: 417 YNCLGHAMDAFDRMRE 432


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +  ++  + +A ++  A  LFD+M  RG  PD YTY+T+I    K G   +A   
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGL 218

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +     D+V YS LI+   K    ++A+ IFS +K+ GI P +V+Y ++I     
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCS 278

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  ++ EM    + PD V++S L++++ +    +EA  V   M E+    ++ T
Sbjct: 279 FSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++  Y       +A +LF  M   G  P V SY+ L+  Y   +   EA  LF  M 
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  N V+Y T+I  + +  +  +A  L ++M   G  P+  TYS ++  + K G L 
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG 458

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+ ++ + ++ + V+Y  +I +  + G + HA++L  EL     QP+     T I
Sbjct: 459 KAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTII 518

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G ++EA   FR+  + G   +   +  +I  F ++K  +  +++  +MR  G+ 
Sbjct: 519 NGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578

Query: 433 PDSHIIA 439
            D    A
Sbjct: 579 ADEGTTA 585



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 225/461 (48%), Gaps = 4/461 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP+    N+++      +  +L   +  ++ + G+ P   T++TLI    K G F
Sbjct: 118 ELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEF 177

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+     M       D+  Y+ +I    K+ + + A  +  ++   G  PD+V Y+T+
Sbjct: 178 AQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTL 237

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K +L  EA  +   M+ +G+ P  VSY++L+       ++ EA ++  EM  +N 
Sbjct: 238 IDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI 297

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T +++ID++ +     +A  +  +M +MG++P+V++YN+L+  Y       EA  
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF +M  +  + +V +Y+ +I  Y      ++A  L  EM ++G+ PN ++Y+T+I  + 
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           + GKL  A  LF+ + ++G   D   Y  ++  + + G +  A RL   ++    +PN +
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  + ++G +  A  +F + F  G   D+ ++  +I    +       +E F KM
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
              G  P+     +++  + + ++   A  L  EM+++G V
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 203/429 (47%), Gaps = 5/429 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGK-EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           F+ M  R   P    ++ L++   +    +D+ IS  +QME   +S +    + LI    
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            +       S+ +++   G+ P ++ + T+IN   KA  F +A  L ++M  +G +PD  
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T++N   +  +   A  +  +M EV C  D+ T + +ID   +  +  +A  +F  M
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  GI P+VVSY +L++       + EA  +   M    I  ++VT++ +I I+ K    
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  +++ M   G+EPN ITY++++  +    ++  A  LF  + + G + D   Y  +
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSIL 377

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y  V  +  AK+L    +H+   PNT+   T I    + G++ EA  +F+     G 
Sbjct: 378 INGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + D+  +  ++E F +         +F  M+     P+  +  ++++S  K      A  
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497

Query: 457 LYSEMQEEG 465
           L+SE+   G
Sbjct: 498 LFSELFVHG 506


>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 808

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 223/459 (48%), Gaps = 6/459 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P    YN ++    RA QW  A  + ++M +  I P R TY+ LI   G  G +
Sbjct: 170 QEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNW 229

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   +QM ++ V  DLV ++ ++   +  + YSKA+S F  +K + I PD    N +
Sbjct: 230 REALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIV 289

Query: 131 INVFGKAKLFKEARLLIEEMREQ--GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I    K    ++A  +   MRE+    +PD V+++++++LY  + +     +VF+ M   
Sbjct: 290 IYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAE 349

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                + + N +I  Y    M+++A  +F  ++  G+ P VVSY +LL  YG ++   +A
Sbjct: 350 GLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKA 409

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F +M++ +++ NVV++N +I  YG +     A  +++EM+  GI PN +T  T++A 
Sbjct: 410 REMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAA 469

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
            G+ G+      +    +  G++++ V   + I +Y  VG    A  L + +R+    PN
Sbjct: 470 CGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPN 529

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           ++     I+   +  +  +A   F    +        V   +I  +S+  +      +F 
Sbjct: 530 SVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFT 589

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            M+ AG  PD      +L++Y     +  A DL  EM++
Sbjct: 590 MMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMED 628



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 234/500 (46%), Gaps = 8/500 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +  W+  +  Y      YN+++R   R    + A GLF EM++    PD  TY+ LI   
Sbjct: 129 VFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAH 188

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G +  A++ ++ M ++ +      Y+NLI       ++ +A+ +  ++  +G+ PDL
Sbjct: 189 GRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDL 248

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +N +++ +     + +A    E M+   ++PDT + + ++   V+  +  +A+ +F  
Sbjct: 249 VTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNS 308

Query: 185 MNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           M E    C  D+ T   +I +Y      ++   +F +M   G+ P++VSYN L+  Y   
Sbjct: 309 MREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFH 368

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +  EA+ +F+ ++   +  +VV+Y +++  YG+S + +KA  +   M+   ++PN +++
Sbjct: 369 GMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSF 428

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR- 361
           + +I  +G  G L  A  + +++   G+  + V   T++ A  R G   +   +L   + 
Sbjct: 429 NALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKM 488

Query: 362 ---QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              + NT+   +AI      G  E+A  ++          +   +  +I    +  KY  
Sbjct: 489 RGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGK 548

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-ML 477
            IE F  M          + + V+ +Y K  +   A+ +++ M+  GC   D + F  ML
Sbjct: 549 AIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCC-PDIITFTAML 607

Query: 478 SLYGARKDFNMLESLFERLD 497
             Y A + +     L + ++
Sbjct: 608 HAYNAGEHWGKACDLIQEME 627



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 178/364 (48%), Gaps = 2/364 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR--GIAPDRYTYSTLITCFGKEGMFDSAI 74
           P     N+V+  +++  Q E A  +F+ MR++     PD  T++++I  +   G  ++  
Sbjct: 281 PDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCK 340

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +    M  + ++  +V Y+ LI          +A+S+F ++K+SG++PD+V+Y ++++ +
Sbjct: 341 AVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSY 400

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G++K  K+AR +   M++  +KP+ VS++ L++ Y  N    +A+ V  EM +     ++
Sbjct: 401 GRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNI 460

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   ++   G+     + D +  + +  GI  + V+ N+ +  Y     + +A+ L+  
Sbjct: 461 VTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNS 520

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++ ++  N VTY  +I    K  ++ KA     +M    I       S++I  + K G+
Sbjct: 521 MRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQ 580

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +  A  +F  ++ +G   D + +  M+ AY        A  L+ E+   +      A + 
Sbjct: 581 ITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSA 640

Query: 375 LARA 378
           L RA
Sbjct: 641 LMRA 644



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 173/367 (47%), Gaps = 35/367 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  +L +  R+KQ + A  +F+ M++  + P+  +++ LI  +G  G+   A+  
Sbjct: 388 PDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKV 447

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++MEQD +  ++V    L+    +        ++ S  K  GI  + VA N+ I  +  
Sbjct: 448 LREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMN 507

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +++A  L   MR+  V P++V+Y+ L++   +  K+ +A+  FA+M E+   L    
Sbjct: 508 VGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEV 567

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           C+ +I  Y +     +A+ +F  M+  G  P ++++  +L  Y   E +G+A  L + M+
Sbjct: 568 CSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEME 627

Query: 257 RKEIEQNVVTYNTMIKIYGKS-------------------------LEHEKATNLMQEMQ 291
             +I+ + +  + +++ + K                           E   A +L+++ +
Sbjct: 628 DYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWR 687

Query: 292 N-----RGIEPNAITYST-----IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                 + +EP+    S      ++ + G++GK++    LF K+ +SG EI+   Y  M+
Sbjct: 688 TILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIML 747

Query: 342 VAYERVG 348
                VG
Sbjct: 748 KNLLAVG 754



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 145/308 (47%), Gaps = 6/308 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A N  + + +   ++E A  L++ MR+  +AP+  TY+ LI+   K   +  AI +   M
Sbjct: 497 ACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADM 556

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            + +++    + S++I    K    ++A SIF+ +K +G  PD++ +  M++ +   + +
Sbjct: 557 MELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHW 616

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A  LI+EM +  ++ DT++ S L+  + +     + L +   M E   P       I 
Sbjct: 617 GKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDA---IF 673

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVS---YNTLLRVYGEAELFGEAIHLFRLMQR 257
            ++     + +D   +   M+ M    SVVS    N LL V G +      + LF  +  
Sbjct: 674 FEMVSACSLLRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITA 733

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              E N  TY+ M+K         K   +++ M++ GI+P+   Y  I +   K G  + 
Sbjct: 734 SGAEINFNTYSIMLKNLLAVGNWRKYIEVLEWMEDAGIQPSIGMYYDISSYVQKGGGAEY 793

Query: 318 AAMLFQKL 325
           AA++ +++
Sbjct: 794 AAIIQERV 801


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 227/452 (50%), Gaps = 4/452 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R + +V++ N+++  + R    + +  +  +M + GI PD  T++ LI     EG    A
Sbjct: 123 RVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEA 182

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +    +M +     +++ Y+ +I    K  + S A+ +F +++ +G  P++V Y+T+I+ 
Sbjct: 183 VELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDS 242

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K +L  +A   + EM E+G+ P+  +Y+++++ +    +  EA  +F EM   +   +
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T  I++D   +  M  +A  +F +M + G++P + +YN L+  Y    L  EA  +F 
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M RK       +YN +I  Y KS   ++A +L+ EM ++ + P+ +TYST++    + G
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +   A  LF+++ S G   + V Y  ++  + + G +  A +LL  +++    P     T
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482

Query: 374 ILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           IL      AG++E A  +F + F  G   DI  +  MI+   +        ++F KM   
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           G+ P+S    +++  + + ++  TA  L  EM
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 170/350 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V  Y+ ++ ++ + +    A     EM +RGI P+ +TY++++  F   G  
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M    V  + V ++ L++   K    S+A  +F  +   G+ PD+  YN +
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +   +L  EA+ + E M  +G  P   SY+ L+N Y ++ +  EA S+ AEM     
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T + ++    QL   K+A  LF  M   G  P++V+Y  LL  + +     EA+ 
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M+ K++E N+V Y  +I+    + + E A  L  ++   G  P+  TY+ +I    
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G  D A  LF+K+   G   +   Y  MI  + +    + A RL+ E+
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 43/341 (12%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +++++E  E    P+VF YN ++       Q   A  LF EM  R + P+  T++ L+  
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGI 120
             KEGM   A    + M +  V  D+  Y+ L++   L R +++  K   I  R    G 
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR---KGC 369

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P   +YN +IN + K++   EA+ L+ EM  + + PDTV+YSTL+    +  +  EAL+
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR--- 237
           +F EM       +L T  I++D + +     +A +L  SM++  ++P++V Y  L+    
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489

Query: 238 VYGEAE--------LFG------------------------EAIHLFRLMQRKEIEQNVV 265
           + G+ E        LFG                        EA  LFR M+      N  
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 549

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +YN MI+ + ++ +   A  L+ EM  +    N  T+  ++
Sbjct: 550 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 201/440 (45%), Gaps = 16/440 (3%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++   +M +      +V +   +    K   YS  +S+ +++    +  ++ + N +
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----N 186
           IN   +      +  ++ +M + G+ PD ++++ L+N      K  EA+ +F EM    +
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E N     T  N +    G   MA D   +F  M + G  P+VV+Y+T++    +  L  
Sbjct: 195 EPNVISYTTVINGLCKT-GNTSMAVD---VFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A+     M  + I  NV TYN+++  +    +  +AT L +EM  R + PN +T++ ++
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
               K G +  A ++F+ +   GVE D   Y  ++  Y    L+  AK++   + +    
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P   +  IL     ++ R++EA  +  + +      D   +  +++   +  +    + +
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLY 480
           F++M S G  P+     ++L+ + K    + A  L   M+E+  +  + VH+ +L   ++
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK-LEPNIVHYTILIEGMF 489

Query: 481 GARKDFNMLESLFERLDSDS 500
            A K   + + LF +L  D 
Sbjct: 490 IAGK-LEVAKELFSKLFGDG 508



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    Y+ +++ + +  + + A  LF EM   G  P+  TY  L+  F K G  D A+ 
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M++ ++  ++V Y+ LIE          A  +FS+L   G  PD+  Y  MI    
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  EA  L  +M + G  P++ SY+ ++  +++N     A+ +  EM      ++L+
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLS 584

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           T  +++D+  Q ++     R     RKM
Sbjct: 585 TFQMLLDLESQDEIISQFMRGSSQGRKM 612



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/324 (18%), Positives = 137/324 (42%), Gaps = 4/324 (1%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA   F+ M ++   PSVV +   L  + + + +   + L   M    +  NV + N +I
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               +    + + +++ +M   GI P+AIT++ +I      GK+  A  LF ++   G E
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            + + Y T+I    + G  + A  +  ++ Q    PN +   T I  L +   + +A   
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +  + G   ++  +  ++  F    +      +F++M      P++    ++++   K
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
                 A  ++  M E+G       +  ++  Y  ++  N  + +FE +           
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375

Query: 508 HHVVAGIYERANRLNDASRIMNRM 531
           ++++   Y ++ R+++A  ++  M
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEM 399



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 59/123 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E +  P++  Y +++  +  A + E+A  LF ++   G  PD  TY+ +I    KEG+ 
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLS 529

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++ME D    +   Y+ +I+   +  D S AI +   +       +L  +  +
Sbjct: 530 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQML 589

Query: 131 INV 133
           +++
Sbjct: 590 LDL 592


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 227/446 (50%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  P+  TY  ++
Sbjct: 174 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A++ L +ME  ++  D+V+++ +I+   K      A+++F  +++ GI 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + P+ V+++ L++ +V+  KFVEA  +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + +M + +   D+ T N +++ +   D    A ++F  M      P VV+YNTL++ + +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           ++   +   LFR M  + +  + VTY T+I+      + + A  + ++M + G+ P+ +T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++      GKL++A  +F  ++ S +++D  +Y TMI    + G V     L   L 
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   T I+ L     ++EA  + ++  + G + +   +  +I    R+   A
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+  +MRS  +  D+  I LV N
Sbjct: 593 ASAELIREMRSCRFVGDASTIGLVAN 618



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 213/458 (46%), Gaps = 4/458 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  + + K++++   L ++M++  I    YTY+ LI CF +     
Sbjct: 78  KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +      +V  S+L+         S A+++  ++   G  PD + + T+I
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  L++ M ++G +P+ V+Y  ++N   +      AL++  +M      
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+   N +ID   +     DA  LF  M   GI P+VV+Y++L+        + +A  L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K+I  N+VT+N +I  + K  +  +A  L  +M  R I+P+  TY++++  +  
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD+A  +F+ + S     D V Y T+I  + +   V     L  E+       +T+ 
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L   G  + A  VF+Q    G   DI  +  +++    N K    +EVF+ M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +    D +I   ++    K  + +   DL+  +  +G
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 221/456 (48%), Gaps = 10/456 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S     Y  +LRN L   + + A GLF  M +    P    ++ L++   K   FD  I
Sbjct: 46  FSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 105

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S  ++M++  +   L  Y+ LI    + S  S A+++  ++   G  P +V  ++++N +
Sbjct: 106 SLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              K   +A  L+++M E G +PDT++++TL++    ++K  EA+++   M +  C  +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 195 TTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T  ++++     G  D+A +   L   M    I+  VV +NT++    +     +A++L
Sbjct: 226 VTYGVVVNGLCKRGDTDLALN---LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+ K I  NVVTY+++I           A+ L+ +M  + I PN +T++ +I  + K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            GK   A  L+  +    ++ D   Y +++  +     +  AK++   +      P+ + 
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    ++ R+E+ T +FR+    G V D   +  +I+    +    N  +VF++M 
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           S G  PD    +++L+      + E A +++  MQ+
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 37/229 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN +++   ++K+ E    LF EM  RG+  D  TY+TLI     +G  D+A   
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS------------------ 118
            +QM  D V  D++ YS L++         KA+ +F  ++ S                  
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517

Query: 119 -----------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                            G+ P++V YNTMI+     +L +EA  L+++M+E G  P++ +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY--GQLD 208
           Y+TL+  ++ +     +  +  EM       D +T  ++ ++   G+LD
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLD 626



 Score = 42.0 bits (97), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/141 (17%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + D++ +++     ++ Y  ++  + +A + +    LF  +  +G+ P+  TY+T+
Sbjct: 488 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+    + +   A + L++M++D    +   Y+ LI    +  D + +  +   ++S   
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D      + N+    +L K
Sbjct: 607 VGDASTIGLVANMLHDGRLDK 627


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 227/446 (50%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  P+  TY  ++
Sbjct: 136 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A++ L +ME  ++  D+V+++ +I+   K      A+++F  +++ GI 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + P+ V+++ L++ +V+  KFVEA  +
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + +M + +   D+ T N +++ +   D    A ++F  M      P VV+YNTL++ + +
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           ++   +   LFR M  + +  + VTY T+I+      + + A  + ++M + G+ P+ +T
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++      GKL++A  +F  ++ S +++D  +Y TMI    + G V     L   L 
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 494

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   T I+ L     ++EA  + ++  + G + +   +  +I    R+   A
Sbjct: 495 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 554

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+  +MRS  +  D+  I LV N
Sbjct: 555 ASAELIREMRSCRFVGDASTIGLVAN 580



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 213/458 (46%), Gaps = 4/458 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +N +L  + + K++++   L ++M++  I    YTY+ LI CF +     
Sbjct: 40  KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 99

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +      +V  S+L+         S A+++  ++   G  PD + + T+I
Sbjct: 100 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 159

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  L++ M ++G +P+ V+Y  ++N   +      AL++  +M      
Sbjct: 160 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 219

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+   N +ID   +     DA  LF  M   GI P+VV+Y++L+        + +A  L
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K+I  N+VT+N +I  + K  +  +A  L  +M  R I+P+  TY++++  +  
Sbjct: 280 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD+A  +F+ + S     D V Y T+I  + +   V     L  E+       +T+ 
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L   G  + A  VF+Q    G   DI  +  +++    N K    +EVF+ M+
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 459

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +    D +I   ++    K  + +   DL+  +  +G
Sbjct: 460 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 221/456 (48%), Gaps = 10/456 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S     Y  +LRN L   + + A GLF  M +    P    ++ L++   K   FD  I
Sbjct: 8   FSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 67

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S  ++M++  +   L  Y+ LI    + S  S A+++  ++   G  P +V  ++++N +
Sbjct: 68  SLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 127

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              K   +A  L+++M E G +PDT++++TL++    ++K  EA+++   M +  C  +L
Sbjct: 128 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 187

Query: 195 TTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T  ++++     G  D+A +   L   M    I+  VV +NT++    +     +A++L
Sbjct: 188 VTYGVVVNGLCKRGDTDLALN---LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+ K I  NVVTY+++I           A+ L+ +M  + I PN +T++ +I  + K
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            GK   A  L+  +    ++ D   Y +++  +     +  AK++   +      P+ + 
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    ++ R+E+ T +FR+    G V D   +  +I+    +    N  +VF++M 
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           S G  PD    +++L+      + E A +++  MQ+
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 37/229 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN +++   ++K+ E    LF EM  RG+  D  TY+TLI     +G  D+A   
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS------------------ 118
            +QM  D V  D++ YS L++         KA+ +F  ++ S                  
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479

Query: 119 -----------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                            G+ P++V YNTMI+     +L +EA  L+++M+E G  P++ +
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY--GQLD 208
           Y+TL+  ++ +     +  +  EM       D +T  ++ ++   G+LD
Sbjct: 540 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLD 588



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 25/141 (17%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + D++ +++     ++ Y  ++  + +A + +    LF  +  +G+ P+  TY+T+
Sbjct: 450 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 508

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+    + +   A + L++M++D    +   Y+ LI    +  D + +  +   ++S   
Sbjct: 509 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 568

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D      + N+    +L K
Sbjct: 569 VGDASTIGLVANMLHDGRLDK 589


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 225/458 (49%), Gaps = 6/458 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFD 71
           R  P VF+YN++L  +    + + A  L   M   G    PD  +YST+I  F KEG  D
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              S   +M   R+S ++V Y+++I    K     KA+ + + +  SG++PD + YN+++
Sbjct: 106 KTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 165

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F  +   KEA + +++MR  GV+PD V+Y++L++   +N +  EA  +F  M +    
Sbjct: 166 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 225

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++TT   ++  Y       +   L   M + GI P+   ++ L+  Y + E   EA+ +
Sbjct: 226 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 285

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+++ +  N VTY  +I I  KS   E A    ++M + G+ P  I Y+++I     
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIP 367
             K +RA  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +P+ I 
Sbjct: 346 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 405

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M 
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREME 465

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           S+G  PD     ++L    + R    A +LY  + + G
Sbjct: 466 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 202/435 (46%), Gaps = 14/435 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 191 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 250

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S L+    K     +A+ +FS+++  G+ P+ V Y  +I +  K
Sbjct: 251 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCK 310

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A L  E+M ++G+ P  + Y++L++     +K+  A  +  EM +    L+   
Sbjct: 311 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++Y+TL+  Y  A    EA  L   M 
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTY+T+I  Y K    + A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------RQPNTIP 367
            A  L+  +  SG +++   Y  ++    +  L   A R+   L         R  N + 
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM- 549

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + GR +EA  +F      G V +   +  M E          + ++F  M 
Sbjct: 550 ----IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 605

Query: 428 SAGYFPDSHIIALVL 442
             G   DS ++  ++
Sbjct: 606 DNGCTVDSGMLNFIV 620



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 7/343 (2%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNL 168
           +F  L   GI PD+ +YN ++N        +EA  L+  M + G    PD VSYST++N 
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           + +     +  S + EM +     ++ T N +I    +      A  +  +M K G+ P 
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            ++YN+++  +  +    EAI   + M+   +E +VVTYN+++    K+    +A  +  
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M  RG++P   TY T++  +   G L     L   +  +G+  +  ++  ++ AY +  
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            V  A  +  ++RQ    PN +     I IL ++GR+E+A   F Q  D G      V+ 
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            +I       K+    E+  +M   G   ++     +++S+ K
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 2/194 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 465 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLT 524

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I+   K+    +A  +F    S+G+VP+   Y  M
Sbjct: 525 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 584

Query: 131 I-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
             N+ G+  L +E   L   M + G   D+   + ++   ++  +   A +  + ++E +
Sbjct: 585 AENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 643

Query: 190 CPLDLTTCNIMIDV 203
             L+ +T ++ ID+
Sbjct: 644 FSLEASTASLFIDL 657


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 228/458 (49%), Gaps = 8/458 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N  L  + +A + +L+   F +M   GIAP  +TY+ +I    KEG   +A
Sbjct: 92  RVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTA 151

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S  +QM++  ++ D+V Y+ LI+   K+    +++ +F  +K  G  PD++ YN +IN 
Sbjct: 152 RSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINS 211

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K K    A     EM+++ +KP+ +SYSTL++   +      A+  F +M  V    +
Sbjct: 212 FCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPN 271

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T + +ID   +     +A  L   M +  +D ++V+Y TLL    E  +  EA  LFR
Sbjct: 272 EFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFR 331

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG--K 311
            M +  +  N+  Y  +I  + K    +KA  L  EM+ + I+P+ + + TI  +WG   
Sbjct: 332 AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTI--VWGLCS 389

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IP 367
             KL+   ++  +++ SG+  +PV+Y T++ AY + G    A  LL E+R   T    + 
Sbjct: 390 ESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVT 449

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G ++EA + F +  D     +++V+  +I+   +N    +  ++F++M+
Sbjct: 450 FCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                PD      +++   K   F+ A ++ ++M E G
Sbjct: 510 DKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 233/497 (46%), Gaps = 39/497 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P+VF YN+++ +V +      A  LF++M++ G+ PD  TY+TLI  +GK G+ D 
Sbjct: 126 AGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDE 185

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           ++   ++M+      D++ Y+ LI    K     +A   F  +K   + P++++Y+T+I+
Sbjct: 186 SVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLID 245

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K  + + A     +M   G+ P+  +YS+L++   +     EA  +  EM + +  L
Sbjct: 246 ALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL 305

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   ++D   +  M  +A+ LF +M K G+ P++ +Y  L+  + +     +A+ LF
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+ K+I+ +++ + T++       + E+   +M EM+  GI  N + Y+T++  + KA
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKA 425

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV---------------------- 350
           G    A  L +++R  G E+  V +  +I    + GLV                      
Sbjct: 426 GNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVY 485

Query: 351 -------------AHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFD 393
                          AK+L  E++  N IP + A T +     + G  +EA  +  +  +
Sbjct: 486 TALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMME 545

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+  +  ++   S+  +     +   +M   G  PD  +   +L  + +L   + 
Sbjct: 546 MGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDE 605

Query: 454 ADDLYSEMQEEGCVFSD 470
           A +L +E+ E+G +  +
Sbjct: 606 AIELQNELVEKGLIHGN 622



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 176/379 (46%), Gaps = 8/379 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L+S L+EL         A   F R+    ++P   + N  ++   KA     +R    +M
Sbjct: 68  LFSVLVELGM----LEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
              G+ P   +Y+ ++    +    + A S+F +M ++    D+ T N +ID YG++ + 
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLL 183

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
            ++  LF  M+ MG +P V++YN L+  + + +    A   FR M+ K+++ NV++Y+T+
Sbjct: 184 DESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTL 243

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    K    + A     +M   G+ PN  TYS++I    KAG L  A ML  ++    V
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATW 386
           +++ V Y T++      G++  A+ L   + +    P   A T L     +   +++A  
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +F +  +     DI ++G ++       K      +  +M+ +G   +  I   ++++Y 
Sbjct: 364 LFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF 423

Query: 447 KLREFETADDLYSEMQEEG 465
           K      A +L  EM++ G
Sbjct: 424 KAGNRTEAINLLEEMRDLG 442



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P +  +  ++  +    + E    +  EM++ GI  +   Y+TL+  + K G   
Sbjct: 370 EKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI+ L++M        +V +  LI+   K     +AI  F R+    + P++  Y  +I
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K     +A+ L +EM+++ + PD ++Y+ +++  +++  F EAL++  +M E+   
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIE 549

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LDL     ++    Q    + A +    M   GI P       LLR + E     EAI L
Sbjct: 550 LDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIEL 609

Query: 252 FRLMQRKEIEQNVVTYNT 269
               Q + +E+ ++  N+
Sbjct: 610 ----QNELVEKGLIHGNS 623


>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 268/599 (44%), Gaps = 76/599 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W+ ++  Y  +V  YN++LR + +A++W     L+DEM  RGI P   TY TL
Sbjct: 178 RALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTL 237

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------ 114
           I  + K G+ + A+ WL +M +  +  D V    +++  +K  ++ KA   F        
Sbjct: 238 IDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKT 297

Query: 115 LKSSGIVPDLVA------------------YNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           LK  G   +  A                  YNT+I+ +GKA   +EA      M  +G+ 
Sbjct: 298 LKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGII 357

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+TV+++T++++   + +  EA S+  +M E+ CP D  T NI+I ++ + +    A   
Sbjct: 358 PNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASY 417

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY-- 274
           F  M++  ++P +VSY TLL  +    L GEA  L   M  + +E +  T + + ++Y  
Sbjct: 418 FKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIE 477

Query: 275 -----------------------------------GKSLEHEKATNLMQEMQNRGIEPNA 299
                                              G  LE EKA    +E +   +    
Sbjct: 478 AGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSV---- 533

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + ++ +I  +G + + ++A  L   + + GV  D   Y ++I       L   AK  L +
Sbjct: 534 LEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMK 593

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +++     + IP    I+   + G++E A  +F++        D+ V+G +I  F+    
Sbjct: 594 MQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGN 653

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ--EEGC-VFSDQV 472
               +     +R+AG   ++ I   ++  Y K+   E A + Y  +Q  E G  V+S   
Sbjct: 654 VREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNC 713

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              M+ LY  R      E +FE L    + N+     ++  +Y+R  +L +A +I+ +M
Sbjct: 714 ---MIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLC-MYKRIGKLKEAFQIVQKM 768



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 228/460 (49%), Gaps = 19/460 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + YN ++    +A Q   A   F  M + GI P+  T++T+I   G  G  + A S +
Sbjct: 324 SSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLM 383

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q+ME+ R   D   Y+ LI L  K ++  +A S F ++K + + PDLV+Y T++  F   
Sbjct: 384 QKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIR 443

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTT 196
            L  EA +L+ EM E+G++ D  + S L  +Y+E     ++   F   + E N   +  +
Sbjct: 444 HLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYS 503

Query: 197 CNIMIDVYGQLDMAKDADRLFWSM---RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N  ID YG+     +A++ F      RK+    SV+ +N +++ YG +  + +A  L  
Sbjct: 504 AN--IDAYGERGHILEAEKAFLCCKESRKL----SVLEFNVMIKAYGISNRYEKACQLID 557

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  +  +YN++I+I   +    KA   + +MQ   +  + I Y  +I+ + K G
Sbjct: 558 SMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLG 617

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRE 369
           +L+ A  LF+++    V+ D V+Y  +I A+  VG V  A   ++ LR      N +   
Sbjct: 618 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 677

Query: 370 TAITILARAGRIEEATWVFR--QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           + I +  + G +EEA   ++  QA + G   D+    CMI+L+S         E+FE ++
Sbjct: 678 SLIKLYTKVGYLEEAQEAYKMLQASEVG--PDVYSSNCMIDLYSERSMVKQAEEIFESLK 735

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             G   +    A++L  Y ++ + + A  +  +M+E G V
Sbjct: 736 RKGD-ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLV 774



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV  +NV+++    + ++E A  L D M   G+ PD+++Y++LI       +   A  +L
Sbjct: 532 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 591

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M++ ++  D + Y  +I    KL     A  +F  +    + PD+V Y  +IN F   
Sbjct: 592 MKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADV 651

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA   +  +R  G+  + V Y++L+ LY +     EA   +  +       D+ + 
Sbjct: 652 GNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSS 711

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M K A+ +F S+++ G D +  S+  +L +Y       EA  + + M+ 
Sbjct: 712 NCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRE 770

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +  ++++YN ++  Y      + A    +EM    I+P+  T+ ++  +  K G
Sbjct: 771 LGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 826



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E +       Y  V+ + ++  Q E+A GLF EM    + PD   Y  LI  F   G  
Sbjct: 595 QETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNV 654

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++++  +    +  + V+Y++LI+L  K+    +A   +  L++S + PD+ + N M
Sbjct: 655 REAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCM 714

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+++ +  + K+A  + E ++ +G   +  S++ +L +Y    K  EA  +  +M E+  
Sbjct: 715 IDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGL 773

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL + N ++  Y      KDA   F  M +  I P   ++ +L  V  +  +  +A+ 
Sbjct: 774 VTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVG 833

Query: 251 LFRLMQRKEIEQNVVTYNTMI 271
              + ++K+ +  +  + +++
Sbjct: 834 KLEMTRKKDPQSGLQAWASIL 854



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/296 (19%), Positives = 113/296 (38%), Gaps = 43/296 (14%)

Query: 241 EAELFGEAIHLFRLMQRKEI-EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           E   +  A+ +F  +++K   E NV+ YN M++I GK+ +     +L  EM +RGI P  
Sbjct: 172 EQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVN 231

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY T+I ++ K G  + A     ++   G+E D V    ++  Y++ G    A++    
Sbjct: 232 STYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKN 291

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
                T+  E         G+  E T                                  
Sbjct: 292 WSLGKTLKDE---------GKTSEPT---------------------------------A 309

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
               E          S+    ++++YGK  +   A D ++ M  EG + +      M+ +
Sbjct: 310 TSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHI 369

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
            G         SL ++++          ++++  ++ + N ++ A+    +M + R
Sbjct: 370 CGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEAR 425



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/156 (18%), Positives = 75/156 (48%), Gaps = 1/156 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P V++ N ++         + A  +F+ ++++G A + ++++ ++  + + G    A  
Sbjct: 705 GPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDA-NEFSFAMMLCMYKRIGKLKEAFQ 763

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +Q+M +  +  DL+ Y+N++        +  A+  F  +  + I PD   + ++  V  
Sbjct: 764 IVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLV 823

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           K  + K+A   +E  R++  +    +++++L   VE
Sbjct: 824 KCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVE 859


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 251/525 (47%), Gaps = 10/525 (1%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W   EA  Y+P V  + +++  + +A +   A  L D MR++G+ P+ +TY+TLI+   +
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
               D A+     ME   V      Y  LI+   K     KA+  F ++K+ GI P++VA
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            N  +    +     EA+ +  E++  G+ PD+V+Y+ ++  Y +  +  EA+ + +EM+
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +V C  D+   N +ID   +    ++A ++F  M +M + P+VV+YN LL   G+     
Sbjct: 537 KVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQ 596

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A+ LF  M       N +T+NT++    K+ E + A  +  +M      P+ +T++TII
Sbjct: 597 KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL--RQPN 364
             + K  ++  A  LF +++   +  D V   T++    + G +  A R+  +   +  +
Sbjct: 657 HGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGS 715

Query: 365 TIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            I R    +    IL  AG  E+A     +       KD SV   +I++  ++KK +   
Sbjct: 716 NIDRSFWEDVMGGILTEAG-TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVAR 774

Query: 421 EVFEKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            VF K  +  G  P   +  L+++ + ++   E A +L+ EM+  GC      +  ++  
Sbjct: 775 NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA 834

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           +G     N L  L++ + +         +++V     ++NRL+ A
Sbjct: 835 HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 218/459 (47%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA +  + ++YN ++  +L++   + A  ++  M   G+ P   T+S L+   GK     
Sbjct: 187 EAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIK 246

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           + +  L++ME   +  ++  Y+  I +  +     +A  I  R+   G  PD+V Y  +I
Sbjct: 247 TVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLI 306

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A+   +A  L  +M+    KPD V+Y TLL+ + +     +   ++ EM      
Sbjct: 307 DALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T  I+++   +     +A  L  +MRK G+ P++ +YNTL+     A    +A+ L
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   +E    TY  +I  +GKS    KA    ++M+ RGI PN +  +  +    +
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAE 486

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+L  A  +F +L+SSG+  D V Y  M+  Y +VG V  A +LL E+     +P+ I 
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV 546

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I  L +AGR+EEA  +F +  +      +  +  ++    +  +    +++FE M 
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G  P++     +L+   K  E + A  ++ +M    C
Sbjct: 607 GHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNC 645



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 219/492 (44%), Gaps = 42/492 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V   N ++  + +A + E A  +F  M +  +AP   TY+ L+   GKEG    A+  
Sbjct: 542  PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M     S + + ++ L++   K  +   A+ +F ++ +    PD++ +NT+I+ F K
Sbjct: 602  FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
                K A  L  +M++  ++PD V+  TLL   +++ +  +A  +  +   +V   +D +
Sbjct: 662  QNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS 720

Query: 196  -------------------------TC-------NIMIDVYGQLDMAKD---ADRLFWSM 220
                                      C       +++I +   L   K    A  +F   
Sbjct: 721  FWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKF 780

Query: 221  RK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
             K +G+ P++  YN L+  + E      A +LF  M+      +  TYN++I  +GKS +
Sbjct: 781  TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
              +  +L  EM  RG +PN ITY+ +I+   K+ +LD+A  L+  L S      P  +  
Sbjct: 841  INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 340  MIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            +I    + G +  A  +    +H   +PN+      +    + G ++ A   F++    G
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 396  EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               D+  +  ++++     +  + +  FEK++ AG  PD     L++N  G+ +  E A 
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 456  DLYSEMQEEGCV 467
             L+ EMQ  G V
Sbjct: 1021 SLFHEMQNRGIV 1032



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 218/494 (44%), Gaps = 44/494 (8%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            EE   +P+V  YN++L  + +  Q + A  LF+ M   G +P+  T++TL+ C  K    
Sbjct: 571  EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            D A+    +M       D++ ++ +I    K +    AI +F ++K   + PD V   T+
Sbjct: 631  DLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTL 689

Query: 131  INVFGKAKLFKEARLLIEE---------------------MREQG--------------- 154
            +    K+   ++A  + E+                     + E G               
Sbjct: 690  LPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRA 749

Query: 155  -VKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTTCNIMIDVYGQLDMAKD 212
              K D+V    ++ +  ++ K   A +VF +   E+     L   N++ID + ++   + 
Sbjct: 750  ICKDDSV-LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEV 808

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A  LF  M+  G  P   +YN+L+  +G++    E   L+  M  +  + N +TYN +I 
Sbjct: 809  AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868

Query: 273  IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
               KS   +KA +L   + +    P   T+  +I    K+G+LD A  +F  +   G   
Sbjct: 869  NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928

Query: 333  DPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
            +  +Y  ++  Y ++G V  A    KR++ E  +P+       + IL  AGR+++A   F
Sbjct: 929  NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYF 988

Query: 389  RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
             +   AG   D+  +  MI    R+++    + +F +M++ G  PD +    ++ + G +
Sbjct: 989  EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048

Query: 449  REFETADDLYSEMQ 462
               E A  +Y E+Q
Sbjct: 1049 GMIEEAGKIYEELQ 1062



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/519 (22%), Positives = 238/519 (45%), Gaps = 15/519 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++ A N  L ++    +   A  +F+E++  G+APD  TY+ ++ C+ K G  D AI 
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M + +   D+++ ++LI+   K     +A  +F R++   + P +V YN ++   G
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLG 590

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    ++A  L E M   G  P+T++++TLL+   +N +   AL +F +M  +NC  D+ 
Sbjct: 591 KEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVL 650

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I  + + +  K+A  LF  M+K+ + P  V+  TLL    ++   G+    FR+ 
Sbjct: 651 TFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKS---GQIEDAFRIT 706

Query: 256 QR--KEIEQNV---VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +    ++  N+      + M  I  ++   EKA    + +  R I  +      II +  
Sbjct: 707 EDFFYQVGSNIDRSFWEDVMGGILTEA-GTEKAILFGERLVCRAICKDDSVLIPIIKVLC 765

Query: 311 KAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
           K  K   A  +F K  +  GV+    +Y  +I  +  V  V  A  L  E++     P+T
Sbjct: 766 KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               + I    ++G+I E   ++ +    G   +   +  +I    ++ +    ++++  
Sbjct: 826 FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           + S  + P       +++   K    + A +++  M   GC  +  ++  +++ YG    
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
            +     F+R+  +      + + ++  I   A R++DA
Sbjct: 946 VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 195/427 (45%), Gaps = 4/427 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ I  +  TY  +       G    A S L++M +     +   Y+ LI    
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +     +A+ ++ R+ S G+ P L  ++ ++   GK +  K    L+EEM   G++P+  
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+  + +   + K  EA  +   M++  C  D+ T  ++ID         DA  LF  M
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +     P  V+Y TLL  + +     +   ++  M+      +VVT+  ++    K+   
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A +L+  M+ +G+ PN  TY+T+I+   +A +LD A  LF  + S GVE     Y  +
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  + + G    A     +++     PN +    ++  LA  GR+ EA  +F +   +G 
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D   +  M++ +S+  +    I++  +M      PD  +I  ++++  K    E A  
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565

Query: 457 LYSEMQE 463
           ++  M+E
Sbjct: 566 MFCRMEE 572



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 157/324 (48%), Gaps = 2/324 (0%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E    P++  YN+++   L     E+A  LF+EM+  G APD +TY++LI   GK G  
Sbjct: 782  KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +       +M       + + Y+ +I    K +   KA+ ++  L S    P    +  +
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I+   K+    +A  + + M   G +P++  Y+ L+N Y +      A   F  M +   
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              DL +  I++D+        DA   F  +++ G+DP +V+YN ++   G ++   EA+ 
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            LF  MQ + I  ++ TYN++I   G     E+A  + +E+Q  G++PN  TY+ +I  + 
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDP 334
             +G  + A  +++K+   G   DP
Sbjct: 1082 LSGNSELAYGIYKKMMVGGC--DP 1103



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 25   VLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
            +++ + + K+  +A  +F +  ++ G+ P    Y+ LI  F +    + A +  ++M+  
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 84   RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
              + D   Y++LI+   K    ++   ++  + + G  P+ + YN +I+   K+    +A
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879

Query: 144  RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
              L   +      P   ++  L++  +++ +  +A  +F  M    C  +    NI+++ 
Sbjct: 880  MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939

Query: 204  YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
            YG+L     A   F  M K GI P + SY  L+ +   A    +A+H F  +++  ++ +
Sbjct: 940  YGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD 999

Query: 264  VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
            +V YN MI   G+S   E+A +L  EMQNRGI P+  TY+++I   G  G ++ A  +++
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059

Query: 324  KLRSSGVEIDPVLYQTMIVAYERVG 348
            +L+  G++ +   Y  +I  Y   G
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSG 1084



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 202/468 (43%), Gaps = 42/468 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI-- 74
            P V  +N ++   ++  Q + A  LF +M++  + PD  T  TL+    K G  + A   
Sbjct: 647  PDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRI 705

Query: 75   --SWLQQME--------QDRVSGDL--------VLY-------------SNLIELARKLS 103
               +  Q+         +D + G L        +L+             S LI + + L 
Sbjct: 706  TEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLC 765

Query: 104  DYSK---AISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + K   A ++F +  K  G+ P L  YN +I+ F +    + A  L EEM+  G  PDT
Sbjct: 766  KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825

Query: 160  VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             +Y++L++ + ++ K  E   ++ EM    C  +  T N++I    + +    A  L+++
Sbjct: 826  FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885

Query: 220  MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            +      P+  ++  L+    ++    +A  +F  M       N   YN ++  YGK   
Sbjct: 886  LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             + A    + M   GI P+  +Y+ ++ I   AG++D A   F+KL+ +G++ D V Y  
Sbjct: 946  VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005

Query: 340  MIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAG 395
            MI    R      A  L HE++    +P      + I  L   G IEEA  ++ +    G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 396  EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
               ++  +  +I  ++ +        +++KM   G  P++   A + N
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/466 (21%), Positives = 206/466 (44%), Gaps = 12/466 (2%)

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV----AYNTMINV 133
            Q E+  V+G     S+  E+   L   S  I      KS G +P++V      N M+ +
Sbjct: 74  SQNEELVVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEI 133

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
               +  ++   + + M+ Q ++ +  +Y  +           +A S   +M E    L+
Sbjct: 134 LRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLN 193

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             + N +I    Q    K+A  ++  M   G+ PS+ +++ L+   G+       + L  
Sbjct: 194 AYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLE 253

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  N+ TY   I++ G+  + ++A  +M+ M + G  P+ +TY+ +I     A 
Sbjct: 254 EMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTAR 313

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           KLD A  LF K++SS  + D V Y T++  +   G +   +++  E+      P     T
Sbjct: 314 KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           I    L +AGRI EA  +       G + ++  +  +I    R  +  + +++F  M S 
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL 433

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  P ++   L+++ +GK      A + + +M+  G   +  +     SLY   +   + 
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG--IAPNIVACNASLYSLAEMGRLG 491

Query: 490 E--SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           E  ++F  L S         ++++   Y +  ++++A ++++ M+K
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK 537



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 63/122 (51%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            ++A   P + AYN+++  + R+++ E A  LF EM+ RGI PD YTY++LI   G  GM 
Sbjct: 992  KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A    ++++   +  ++  Y+ LI       +   A  I+ ++   G  P+   +  +
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111

Query: 131  IN 132
             N
Sbjct: 1112 PN 1113


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 223/493 (45%), Gaps = 60/493 (12%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V + DW+  +  Y  SVF YN  L  + +A   +LA+  F +M++RG  PD +TYS ++ 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIV 121
              K G  D A   L Q+ +  V  +++ YS +I+   K S    A+ IF  + +  G V
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V +N+++      +   EA +L E M + G +P+ +SYSTLL+   +  +  EA  +
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 182 FAEMNEVNCPLDLT--------------------TC------------------------ 197
           + EM E +C  DL                      C                        
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 198 --------NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                   N MI+   +  M  +A + F  M      PS   +NTL+    +++   + +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 250 HLFRLMQR-KE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            LF+ M+  KE     N+ TYN M+    K+ + ++A  L+ EM N G+ P+ +TYS ++
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
               K GKLDRA  L +++   GV  D     +++ A  + G V +A   L  ++     
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +   T +  L +AGRI+EA     +   A    D+  +  +I    R+ + A    +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 423 FEKMRSAGYFPDS 435
           F++M   G  PD+
Sbjct: 502 FQEMVKRGVLPDT 514



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 208/471 (44%), Gaps = 27/471 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N +L+ +   ++   A  LF+ M + G  P+  +YSTL+    K G  D A   
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M +     DLV Y++ +    K +  ++A     ++ + G   D VA++T+I +  K
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 137 -----------------AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
                            + +  EA    EEM  +   P    ++TL++   ++ +  + +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 180 SVF---AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            +F     M E  CP +L T NIM+D   +     +A  L   M   G+ P VV+Y+ L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +      A  L   M ++ +  +  T  +++    K+ + + A + ++ M+ RG  
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P+ +TY+T++    KAG++D A     K+ ++    D   Y  +I A  R G  A A  +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+ +    P+T+   + +  LAR G  + A  + + +       D  +   +++   +
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVVDGLCK 558

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             K  +  EV E+M  AG+  D+     V+    KL + + A  L  +  E
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 6/310 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFD 71
           + PS   +N ++  V ++K+      LF  M+        P+  TY+ ++    K    D
Sbjct: 297 HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   + +M    +S D+V YS L++   KL    +A  +   +   G+ PD     +++
Sbjct: 357 EAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASIL 416

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   KA     A   +E M+ +G  PD V+Y+TLL+   +  +  EA++  A+M    C 
Sbjct: 417 NALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCT 476

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ +  I+I    +   A  A  +F  M K G+ P  V Y++LL       L   A+ L
Sbjct: 477 PDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL 536

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            +    K    + V +  ++    K+ + E A  +++ M + G   +A TY  ++    K
Sbjct: 537 LKTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRK 593

Query: 312 AGKLDRAAML 321
            GK+D+A  L
Sbjct: 594 LGKVDKARQL 603


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 229/457 (50%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P VF+YN +L+ +    R+++  EL H + D+ R  G  PD  +Y+T++  F KEG  D 
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M    +  D+V YS++I    K     KA+ + + +  +G++PD + YN++++
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  +   KEA   +++MR  GV+P+ V+YS+L+N   +N +  EA  +F  M +     
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   ++  Y       +   L   M + GI P    +N L+  Y + E   +A+ +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M++  +  NVV Y T+I +  KS   + A    ++M + G+ PN I Y+++I      
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K D+A  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +P+ I  
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EAT +       G   DI  +G +I  + R  +  + + +F++M S
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  P+     ++L      R    A +LY  + + G
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 203/426 (47%), Gaps = 4/426 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y+ ++  + +  +   A  +FD M +RG+ PD  TY TL+  +  +G      + 
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  D  +++ LI    K     +A+ +FS+++  G+ P++V Y T+I+V  K
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A L  E+M ++G+ P+ + Y++L++      K+ +A  +  EM +    L+   
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++YNTL+     A    EA  L   M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ ++VTY T+I  Y +    + A  L +EM + G+ PN ITY+ I+       +  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR++EA  +F      G V D+  +  M E          + ++F  M   G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 433 PDSHII 438
            DS ++
Sbjct: 724 ADSRML 729



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 221/527 (41%), Gaps = 80/527 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL    +    + A+  + EM  RGI PD  TYS++I    K    D A+  
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  D + Y++++          +AI    +++S G+ P++V Y++++N   K
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY------VENH----------------- 173
                EAR + + M ++G++PD  +Y TLL  Y      VE H                 
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 174 ------------KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
                       K  +A+ VF++M +     ++     +IDV  +     DA   F  M 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSL 278
             G+ P+++ Y +L+      + + +A  L   M  + I  N + +N++I  +   G+ +
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           E EK  +LM  +   G++P+ ITY+T+I     AGK+D A  L   + S GV+ D V Y 
Sbjct: 499 ESEKLFDLMVRI---GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           T+I  Y RV  +  A  L  E+      PN I     +  L    R   A  ++     +
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKM---------------------------- 426
           G   ++S +  ++    +N      + +F+ +                            
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 427 -------RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
                   + G  PD    +L+  +  +    E  DDL+  M+E GC
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 202/458 (44%), Gaps = 45/458 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P  +TY+ LI C  + G  D   
Sbjct: 54  SIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGF 112

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L  + +     D + ++ L++                     G+  D    + M    
Sbjct: 113 AALGNVVKKGFRVDAITFTPLLK---------------------GLCADKRTSDAM---- 147

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE---VNCP 191
                     +++  M E G  PD  SY+ LL    + ++  EAL +   M +      P
Sbjct: 148 ---------DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSP 198

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + N +++ + +   +  A   +  M   GI P VV+Y++++    +A+   +A+ +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M +  +  + +TYN+++  Y  S + ++A   +++M++ G+EPN +TYS+++    K
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G+   A  +F  +   G+E D   Y+T++  Y   G +     LL  + +    P    
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             IL    A+  ++++A  VF +    G   ++  +G +I++  ++    + +  FE+M 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  P+  +   +++      +++ A++L  EM + G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 161/360 (44%), Gaps = 35/360 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N+++    + ++ + A  +F +MRQ G+ P+   Y T+I    K G  D A+ +
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 77  LQQMEQDRVSGDLVLYSNLI-------------ELARKLSDYSKAIS------------- 110
            +QM  + ++ ++++Y++LI             EL  ++ D    ++             
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 111 ---------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                    +F  +   G+ PD++ YNT+I+    A    EA  L+  M   GVKPD V+
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N Y    +  +AL++F EM       ++ T NI++           A  L+ S+ 
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G    + +YN +L    +  L  EA+ +F+ +   +++    T+N MI    K    +
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 673

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +L       G+ P+  TYS +     + G L+    LF  +  +G   D  +  +++
Sbjct: 674 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 733



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 137/304 (45%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  Y  ++  +    +W+ A  L  EM  RGI  +   ++++I    KEG    +  
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 502

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  V  D++ Y+ LI+         +A  + + + S G+ PD+V Y T+IN + 
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     +A  L +EM   GV P+ ++Y+ +L       +   A  ++  + +    L+L+
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI++    + ++  +A R+F ++    +     ++N ++    +     EA  LF   
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  +V TY+ M +   +    E+  +L   M+  G   ++   ++I+    + G +
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 742

Query: 316 DRAA 319
            RA 
Sbjct: 743 TRAG 746


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 229/457 (50%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P VF+YN +L+ +    R+++  EL H + D+ R  G  PD  +Y+T++  F KEG  D 
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M    +  D+V YS++I    K     KA+ + + +  +G++PD + YN++++
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  +   KEA   +++MR  GV+P+ V+YS+L+N   +N +  EA  +F  M +     
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   ++  Y       +   L   M + GI P    +N L+  Y + E   +A+ +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M++  +  NVV Y T+I +  KS   + A    ++M + G+ PN I Y+++I      
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K D+A  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +P+ I  
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EAT +       G   DI  +G +I  + R  +  + + +F++M S
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  P+     ++L      R    A +LY  + + G
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 218/524 (41%), Gaps = 74/524 (14%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL    +    + A+  + EM  RGI PD  TYS++I    K    D A+  
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  D + Y++++          +AI    +++S G+ P++V Y++++N   K
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G++PD  +Y TLL  Y      VE  ++   M       D   
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I  Y + +    A  +F  MR+ G++P+VV Y T++ V  ++    +A+  F  M 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +  N++ Y ++I       + +KA  L+ EM +RGI                     
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +P+ ITY+T+I     AGK+D A  L   + S GV+ D V Y T+I
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y RV  +  A  L  E+      PN I     +  L    R   A  ++     +G  
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKM------------------------------- 426
            ++S +  ++    +N      + +F+ +                               
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 427 ----RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
                + G  PD    +L+  +  +    E  DDL+  M+E GC
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 203/426 (47%), Gaps = 4/426 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y+ ++  + +  +   A  +FD M +RG+ PD  TY TL+  +  +G      + 
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  D  +++ LI    K     +A+ +FS+++  G+ P++V Y T+I+V  K
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A L  E+M ++G+ P+ + Y++L++      K+ +A  +  EM +    L+   
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++YNTL+     A    EA  L   M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ ++VTY T+I  Y +    + A  L +EM + G+ PN ITY+ I+       +  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR++EA  +F      G V D+  +  M E          + ++F  M   G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 433 PDSHII 438
            DS ++
Sbjct: 724 ADSRML 729



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 202/458 (44%), Gaps = 45/458 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P  +TY+ LI C  + G  D   
Sbjct: 54  SIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGF 112

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L  + +     D + ++ L++                     G+  D    + M    
Sbjct: 113 AALGNVVKKGFRVDAITFTPLLK---------------------GLCADKRTSDAM---- 147

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE---VNCP 191
                     +++  M E G  PD  SY+ LL    + ++  EAL +   M +      P
Sbjct: 148 ---------DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSP 198

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + N +++ + +   +  A   +  M   GI P VV+Y++++    +A+   +A+ +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M +  +  + +TYN+++  Y  S + ++A   +++M++ G+EPN +TYS+++    K
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G+   A  +F  +   G+E D   Y+T++  Y   G +     LL  + +    P    
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             IL    A+  ++++A  VF +    G   ++  +G +I++  ++    + +  FE+M 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  P+  +   +++      +++ A++L  EM + G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 166/373 (44%), Gaps = 36/373 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A+LD +       P    +N+++    + ++ + A  +F +MRQ G+ P+   Y T+I  
Sbjct: 362 ALLDLMVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-------------ELARKLSDYSKAIS 110
             K G  D A+ + +QM  + ++ ++++Y++LI             EL  ++ D    ++
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480

Query: 111 ----------------------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
                                 +F  +   G+ PD++ YNT+I+    A    EA  L+ 
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            M   GVKPD V+Y TL+N Y    +  +AL++F EM       ++ T NI++       
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
               A  L+ S+ K G    + +YN +L    +  L  EA+ +F+ +   +++    T+N
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 660

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            MI    K    ++A +L       G+ P+  TYS +     + G L+    LF  +  +
Sbjct: 661 IMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720

Query: 329 GVEIDPVLYQTMI 341
           G   D  +  +++
Sbjct: 721 GCSADSRMLNSIV 733



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 158/352 (44%), Gaps = 4/352 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  Y  ++  +    +W+ A  L  EM  RGI  +   ++++I    KEG    +  
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 502

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  V  D++ Y+ LI+         +A  + + + S G+ PD+V Y T+IN + 
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     +A  L +EM   GV P+ ++Y+ +L       +   A  ++  + +    L+L+
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI++    + ++  +A R+F ++    +     ++N ++    +     EA  LF   
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  +V TY+ M +   +    E+  +L   M+  G   ++   ++I+    + G +
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 742

Query: 316 DRAA----MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            RA     M+ +K  S        L ++  + +E++  ++H    L  ++QP
Sbjct: 743 TRAGTYLFMIDEKHFSLEASTASFLLESSPIVWEQISRISHLSVNLKLIKQP 794


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 234/476 (49%), Gaps = 37/476 (7%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  + ELA G+F+     G     + +S LI+ +GK G FD AI   + M+   +  +LV
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLV 258

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ +I+   K   ++ + + IF  +  +G+ PD + YN+++ V  +  L++ AR L  E
Sbjct: 259 TYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNE 318

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M ++G+  D  +Y+TLL+   +  +   A  +  EM       ++ T + M D Y +   
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGR 378

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +DA  L+  M+ +GI    VSYNTLL +Y +   F +A+ + + M    ++++VVTYN 
Sbjct: 379 LEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK  +  + T + +EM+   + PN +TYST+I ++ K    + A  +F++ + +G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG------ 379
           ++ D VLY  +I A  + GLV  A  LL E+ +    PN +   + I    R+       
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558

Query: 380 ---------RIEEATWVFRQAFDAGEVK--DISVFGCMIELFSRNKKYA----------- 417
                    + E  +++  +  D  E+   D  VF    +L S  +  A           
Sbjct: 559 DGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIR 618

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           +++ VF+KM      P+    + +LN+  + +  E A  L  E++    +F +QV+
Sbjct: 619 SILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELR----LFDNQVY 670



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 166/297 (55%), Gaps = 1/297 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN V+    +   +++    +F+EM + G+ PDR TY++L+    + G++++A +
Sbjct: 255 PNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    +  D+  Y+ L++   K      A  I   +    I+P++V Y+TM + + 
Sbjct: 315 LFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   ++A  L  EM+  G+  D VSY+TLL++Y +  +F +AL V  EM       D+ 
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D YG+     +  R+F  M+K  + P++++Y+TL+ VY +  L+ EA+ +FR  
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           ++  ++ +VV Y+ +I    K+   + A  L+ EM   GI PN +TY++II  +G++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 28/373 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L    R   WE A  LF+EM  RGI  D +TY+TL+    K G  D A   
Sbjct: 291 PDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEI 350

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M   ++  ++V YS + +   K      A+++++ +K  GI  D V+YNT+++++ K
Sbjct: 351 MLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAK 410

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F++A  + +EM   GVK D V+Y+ LL+ Y +  KF E   VF EM +     +L T
Sbjct: 411 LGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +IDVY +  + ++A  +F   ++ G+   VV Y+ L+    +  L   A+ L   M 
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT 530

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHE------KATNLMQE-----MQNRGIEPNAIT---- 301
           ++ I  NVVTYN++I  +G+S   E       A+N  Q      M   G++ + I     
Sbjct: 531 KEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDG 590

Query: 302 -----YSTIIAIWGKAGKLDRAAM--------LFQKLRSSGVEIDPVLYQTMIVAYERVG 348
                Y  +++      K +R           +F+K+    ++ + V +  ++ A  R  
Sbjct: 591 HVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCK 650

Query: 349 LVAHAKRLLHELR 361
            +  A  LL ELR
Sbjct: 651 SIEDASMLLEELR 663



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 5/362 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L     A  +F    S G    + A++ +I+ +GK+  F EA  + E M
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           +  G+KP+ V+Y+ +++   +   +F   + +F EM       D  T N ++ V  +  +
Sbjct: 249 KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGL 308

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  LF  M   GID  V +YNTLL    +      A  +   M  K+I  NVVTY+T
Sbjct: 309 WEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYST 368

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M   Y K+   E A NL  EM+  GI  + ++Y+T+++I+ K G+ + A  + +++ SSG
Sbjct: 369 MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           V+ D V Y  ++  Y + G      R+  E+++    PN +   T I + ++    EEA 
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAM 488

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VFR+   AG   D+ ++  +I    +N    + + + ++M   G  P+      +++++
Sbjct: 489 EVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548

Query: 446 GK 447
           G+
Sbjct: 549 GR 550



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 180/376 (47%), Gaps = 38/376 (10%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VF YN +L  V +  Q +LA+ +  EM  + I P+  TYST+   + K G  + A++   
Sbjct: 328 VFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYN 387

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+   +  D V Y+ L+ +  KL  +  A+ +   + SSG+  D+V YN +++ +GK  
Sbjct: 388 EMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQG 447

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F E   + +EM++  V P+ ++YSTL+++Y +   + EA+ VF E  +     D+   +
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYS 507

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG------------------ 240
            +I+   +  +   A  L   M K GI P+VV+YN+++  +G                  
Sbjct: 508 ELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNER 567

Query: 241 --------------EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                         E+E+  +  H+F+  Q+   E+        +   GK  E     ++
Sbjct: 568 QSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERL---GKE-EIRSILSV 623

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            ++M    I+PN +T+S I+    +   ++ A+ML ++LR    ++  V +  ++   E 
Sbjct: 624 FKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSEN 683

Query: 347 VGLVAHAKRLLHELRQ 362
           V +   A+ L  E++Q
Sbjct: 684 VWI--QAQYLFDEVKQ 697



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI   G+L   + A  +F +    G   +V +++ L+  YG++  F EAI +F  M+   
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252

Query: 260 IEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           ++ N+VTYN +I   GK  +E ++   + +EM   G++P+ ITY++++A+  + G  + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF ++   G++ D   Y T++ A  + G +  A  ++ E+      PN +   T    
Sbjct: 313 RNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADG 372

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+AGR+E+A  ++ +    G   D   +  ++ ++++  ++ + ++V ++M S+G   D
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKD 432

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEE 464
                 +L+ YGK  +F     ++ EM+++
Sbjct: 433 VVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 7/313 (2%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN--VVTYNTMIKIYGKSLEHEKATNLMQE 289
           Y  LLR  G      +AI  F     +E  +N      + MI   G+  + E A  + + 
Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             + G       +S +I+ +GK+G  D A  +F+ ++ SG++ + V Y  +I A  + G+
Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272

Query: 350 -----VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
                V   + +L    QP+ I   + + + +R G  E A  +F +  D G  +D+  + 
Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +++   +  +     E+  +M      P+    + + + Y K    E A +LY+EM+  
Sbjct: 333 TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G       +  +LS+Y     F     + + + S         ++ +   Y +  + N+ 
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452

Query: 525 SRIMNRMNKRRTF 537
           +R+   M K R F
Sbjct: 453 TRVFKEMKKDRVF 465



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P++  Y+ ++    +   +E A  +F E +Q G+  D   YS LI    K G+ DSA
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIE 97
           +  L +M ++ +  ++V Y+++I+
Sbjct: 523 VLLLDEMTKEGIRPNVVTYNSIID 546


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 221/448 (49%), Gaps = 11/448 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +N +L  +    +   A  LFDEM + G  PD  TYST+I    K G    A+  
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     ++V Y+ +I+   K    ++A+  FS +   GI PD+  Y+++++ F  
Sbjct: 68  LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L ++M E+ V P+ V+++ L++   +     EA  VF  M E     D+ T
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D Y       +A +LF  M + G  P+V SYN L+  + ++    EA  L   M 
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  ++ TY+T+++ + +    ++A  L++EM + G+ PN ITYS ++    K G LD
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + ++ S +E +  +Y  +I      G +  A+ L   L     QP  +     I
Sbjct: 308 EAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           + L + G   EA  +FR+    G + +   +  +I+ F RN    N + + E+M   G+ 
Sbjct: 368 SGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFS 427

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSE 460
            DS       +++  L + E++D++ S+
Sbjct: 428 ADS-------STFRMLSDLESSDEIISQ 448



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 175/350 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V AYN ++ ++ + +    A   F EM + GI PD +TYS+++  F   G  
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S  +QM +  V  + V ++ LI+   K    S+A  +F  +   G+ PD+  YN +
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +       EA+ L   M  +G  P+  SY+ L+N + ++ +  EA  + AEM+  + 
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + ++  + Q+   ++A  L   M   G+ P++++Y+ +L    +     EA  
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + MQ  +IE N+  Y  +I+      + E A  L   +  +GI+P  +TY+ +I+   
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G  + A  LF+++  +G   +   Y  +I  + R G   +A RL+ E+
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 35/158 (22%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E++  P++F Y +++  +    + E A  LF  +  +GI P   TY+ +I+     G+ 
Sbjct: 317 QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMIS-----GLL 371

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              +S                              ++A  +F  +  +G +P+   YN +
Sbjct: 372 KGGLS------------------------------NEACELFREMAVNGCLPNSCTYNVI 401

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           I  F +      A  LIEEM  +G   D+ ++  L +L
Sbjct: 402 IQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL 439


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 228/481 (47%), Gaps = 48/481 (9%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  + E+A  +F      G     Y +S +I+ +G+ G  + AI     M+   +  +LV
Sbjct: 89  RLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLV 148

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ +I+   K   ++ + + IF  +  +G+ PD + +N+++ V  K  L++ AR L  E
Sbjct: 149 TYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCE 208

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M  +G+  D  +Y+TLL+   +  +   A  + +EM   N   ++ T + MID Y +   
Sbjct: 209 MVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGR 268

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA  LF  M+ +GI    VSYNTLL +Y +   F EA+ + R M+   I ++VVTYN 
Sbjct: 269 LDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNA 328

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK  +++    + +EM+ R + PN +TYST+I ++ K G    A  +F++ + +G
Sbjct: 329 LLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAG 388

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           ++ D VLY  +I A  + GLV  A  LL E+ +    PN +   + I    R    E   
Sbjct: 389 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVV 448

Query: 386 WVFRQAFDAGEVKDISVFGC--------------------MIELF-------------SR 412
                  DAG+  ++ +                       +I++F             S 
Sbjct: 449 ------DDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSG 502

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
            ++   ++ VF KM      P+    + +LN+  +   FE A  L  E++    +F +QV
Sbjct: 503 GQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELR----LFDNQV 558

Query: 473 H 473
           +
Sbjct: 559 Y 559



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 27/372 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N +L    +   WE A  L  EM  RGI  D +TY+TL+    K G  D A   
Sbjct: 181 PDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEI 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M    +  ++V YS +I+   K      A ++F+ +K  GI  D V+YNT+++++ K
Sbjct: 241 MSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAK 300

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F+EA  +  EM   G++ D V+Y+ LL  Y + +K+     VF EM   +   +L T
Sbjct: 301 LGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +IDVY +  + ++A  +F   +K G+   VV Y+ L+    +  L   A+ L   M 
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATN---LMQEMQNRGIEPNAITYST--------- 304
           ++ I  NVVTYN++I  +G+    E   +      E+Q   +  +A+  +T         
Sbjct: 421 KEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADRED 480

Query: 305 --IIAIWG-----KAGKLDRAA--------MLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             II I+G     KAG+   +          +F K+    ++ + V +  ++ A  R   
Sbjct: 481 NRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNS 540

Query: 350 VAHAKRLLHELR 361
              A  LL ELR
Sbjct: 541 FEEASMLLEELR 552



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 182/378 (48%), Gaps = 5/378 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L     A ++F    + G    + A++ +I+ +G++    EA  +   M
Sbjct: 79  LASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSM 138

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           ++ G+KP+ V+Y+ +++   +   +F   L +F EM       D  T N ++ V  +  +
Sbjct: 139 KDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGL 198

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  L   M   GID  + +YNTLL    +      A  +   M  K I  NVVTY+T
Sbjct: 199 WEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYST 258

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           MI  Y K+   + A NL  EM+  GI  + ++Y+T+++I+ K G+ + A  + +++ +SG
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           +  D V Y  ++  Y +       +++  E++     PN +   T I + ++ G   EA 
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VFR+   AG   D+ ++  +I+   +N    + + + ++M   G  P+      +++++
Sbjct: 379 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438

Query: 446 GKLREFETADDLYSEMQE 463
           G+    E+  D   +  E
Sbjct: 439 GRPATTESVVDDAGQTSE 456



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 42/305 (13%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI   G+L   + A  +F +    G   +V +++ ++  YG +    EAI +F  M+   
Sbjct: 83  MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142

Query: 260 IEQNVVTYNTMIKIYGKS-LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           ++ N+VTYN +I   GK  +E ++   +  EM   G++P+ IT+++++A+  K G  + A
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             L  ++ + G++ D   Y T++ A  + G +  A  ++ E+      PN +   T I  
Sbjct: 203 RSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDG 262

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+AGR+++A                           RN        +F +M+  G   D
Sbjct: 263 YAKAGRLDDA---------------------------RN--------LFNEMKFLGISLD 287

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLF 493
                 +L+ Y KL  FE A D+  EM+  G +  D V +  +L  YG +  ++++  +F
Sbjct: 288 RVSYNTLLSIYAKLGRFEEAMDVCREMENSG-IRKDVVTYNALLGGYGKQYKYDVVRKVF 346

Query: 494 ERLDS 498
           E + +
Sbjct: 347 EEMKA 351



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 17/287 (5%)

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---QRKEI 260
           YG+ + A +   L +  R  G D     Y  LLR  G      +AI  F      +RK+ 
Sbjct: 19  YGKDERALENVLLNFESRLSGSD----DYVFLLRELGNRGDCKKAICCFEFAVKRERKKN 74

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           EQ  +  + MI   G+  + E A  + +     G       +S II+ +G++G  + A  
Sbjct: 75  EQGKLA-SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIK 133

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELR---QPNTIPRETAIT 373
           +F  ++  G++ + V Y  +I A  + G+    KR+L      LR   QP+ I   + + 
Sbjct: 134 IFYSMKDYGLKPNLVTYNAVIDACGKGGV--EFKRVLEIFDEMLRNGMQPDRITFNSLLA 191

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           + ++ G  E A  +  +  + G  +DI  +  +++   +  +     E+  +M +    P
Sbjct: 192 VCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILP 251

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           +    + +++ Y K    + A +L++EM+  G       +  +LS+Y
Sbjct: 252 NVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIY 298


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 251/510 (49%), Gaps = 20/510 (3%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD+ ++  E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++  
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 64  FGKEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             K+G   SA++ L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           DL  YN+MI  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM       +  T + MID + + +    A+ +F+ M   G  P+++++NTL+  Y  A
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +   + + L   M    +  +  TYNT+I  +    +   A +L+QEM + G+ P+ +T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVA 351
            T++      GKL  A  +F+ ++ S           GVE D   Y  +I      G   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A+ L  E+      P+TI   + I  L +  R++EAT +F          ++  F  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             + +  +  + +E+F +M   G   ++     ++  + K+     A D++ EM   G V
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG-V 647

Query: 468 FSDQVHFQ-MLSLYGARKDFNMLESLFERL 496
           + D +  + ML+   ++++     ++ E+L
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 253/539 (46%), Gaps = 18/539 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+  F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITYS++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   + + + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + ++   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V     +  M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 610



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 222/448 (49%), Gaps = 29/448 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + Y++MI+ F K      A  +   M  +G  P+ ++++TL++ Y    +  + + +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ +TLL  
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD---LLQEMISSGLCPDIVTCDTLLDG 474

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F++MQ+ +           +E +V TYN +I      GK LE E+  
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE-- 532

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 533 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD- 399
            + G V     L  E+ +     N I   T I    + G I  A  +F++   +G   D 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMR 427
           I++   +  L+S+ ++    + + EK++
Sbjct: 652 ITIRNMLTGLWSK-EELKRAVAMLEKLQ 678



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 177/405 (43%), Gaps = 9/405 (2%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + NI+I  +        A   F  + K+G+ P VV++ TLL      +   EA+  F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDF 486
            G  P++   + +++ + K    + A+ ++  M  +GC   + + F  L     GA++  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRID 412

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +E L E  ++    +    + ++ G Y   + LN A  ++  M
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGD-LNAALDLLQEM 456


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 244/521 (46%), Gaps = 7/521 (1%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    R  + W     L +EMR  G+ PD +T ST+I   G++G+ D A++
Sbjct: 122 PTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA 181

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + ++       +V Y+ L+++  K  +Y++A+ +   ++ SG  PD V YN +   + 
Sbjct: 182 FFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYA 241

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A  F+EA   ++ M  +G+ P+T +Y+T++  Y    +  EAL++F  M +     ++ 
Sbjct: 242 RAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 301

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++  + G+         +   M + G  P+ V++NT+L V G+  +      +   M
Sbjct: 302 TYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGM 361

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +E +  TYNT+I  YG+      A  +  EM + G  P   TY+ ++ +  + G  
Sbjct: 362 KSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDW 421

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +  K+  +G + +   Y  ++  Y + G  A  + +  E+      P    +  L
Sbjct: 422 STAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTL 481

Query: 376 ARAG----RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             A     R+E     F++    G   D+ +F  M+ ++++N  Y+   E+F+ ++ +G 
Sbjct: 482 VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGL 541

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
            PD      +++ Y K  E   A+ +  +++    V  D V +  +++ +  +      +
Sbjct: 542 SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEAQ 600

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            +   + +D        +H + G Y      N+A  ++N M
Sbjct: 601 RILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 233/539 (43%), Gaps = 42/539 (7%)

Query: 34  QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSG-DLVLY 92
            WE A  L       G A D      ++   G+EG  D     L +M     S  D+  Y
Sbjct: 34  HWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 92

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIEEMR 151
           + ++    +   Y +A+ +F+ L+  G+VP +V YN +++V+G+  + +     L+EEMR
Sbjct: 93  TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMR 152

Query: 152 EQGVKPD-----------------------------------TVSYSTLLNLYVENHKFV 176
             GV+PD                                    V+Y+ LL ++ +   + 
Sbjct: 153 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 212

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EAL V  EM +  C  D  T N +   Y +    ++A +   +M   G+ P+  +YNT++
Sbjct: 213 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 272

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             Y       EA+ LF  M++     NV TYN +  + GK         +++EM   G  
Sbjct: 273 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 332

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN +T++T++A+ GK G  D    +   ++S GVE+    Y T+I AY R G   +A ++
Sbjct: 333 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKM 392

Query: 357 LHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+      P  T     + +L+R G    A  +  +    G   +   +  +++ +++
Sbjct: 393 YDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAK 452

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
               A +  + +++     FP   I+  ++ +  K R  E  +  + E++ +G      +
Sbjct: 453 GGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVI 512

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              ML++Y     ++    +F+ +           ++ +  +Y ++N   +A +I+ ++
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL 571



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 172/380 (45%), Gaps = 38/380 (10%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R  A+L+ + E +R   +P+   +N +L    +    +    + + M+  G+   R TY+
Sbjct: 315 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 374

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           TLI+ +G+ G    A     +M     +  L  Y+ L+ +  +  D+S A SI S++  +
Sbjct: 375 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 434

Query: 119 GIVPDLVAYNTMINVFGKA------------------------------KLFKEARL--- 145
           G  P+  +Y+ ++  + K                                 FK  RL   
Sbjct: 435 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 494

Query: 146 --LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               +E++ QG KPD V ++++L +Y +N  + +A  +F  + +     DL T N ++D+
Sbjct: 495 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 554

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y + + + +A+++   ++   + P VVSYNT++  + +  L  EA  +   M    +   
Sbjct: 555 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 614

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY+T++  Y       +A  ++  M +  ++P  +TY  ++  + KA + D A     
Sbjct: 615 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLS 674

Query: 324 KLRSSGVEIDPVLYQTMIVA 343
           ++  +    D  L Q M+ A
Sbjct: 675 EISDTDQNFDQKL-QHMLEA 693


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 246/502 (49%), Gaps = 18/502 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++    K+G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 72  SAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           SA++ L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI PDL  YN+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++ EM     
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + MID + + +    A+ +F+ M   G  P+++++NTL+  Y  A+   + + 
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M    +  +  TYNT+I  +    +   A +L+QEM + G+ P+ +T  T++    
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 311 KAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             GKL  A  +F+ ++ S           GVE D   Y  +I      G    A+ L  E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +      P+TI   + I  L +  R++EAT +F          ++  F  +I  + +  +
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + +E+F +M   G   ++     ++  + K+     A D++ EM   G V+ D +  +
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG-VYPDTITIR 655

Query: 476 -MLSLYGARKDFNMLESLFERL 496
            ML+   ++++     ++ E+L
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKL 677



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 255/539 (47%), Gaps = 18/539 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+++F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITYS++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   + + + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + ++   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V     +  M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 610



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 222/448 (49%), Gaps = 29/448 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + Y++MI+ F K      A  +   M  +G  P+ ++++TL++ Y    +  + + +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ +TLL  
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD---LLQEMISSGLCPDIVTCDTLLDG 474

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F++MQ+ +           +E +V TYN +I      GK LE E+  
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE-- 532

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 533 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD- 399
            + G V     L  E+ +     N I   T I    + G I  A  +F++   +G   D 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMR 427
           I++   +  L+S+ ++    + + EK++
Sbjct: 652 ITIRNMLTGLWSK-EELKRAVAMLEKLQ 678



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + +  I+I  +        A   F  + K+G+ P VV++NTLL      +   EA++LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDF 486
            G  P++   + +++ + K    + A+ ++  M  +GC   + + F  L     GA++  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRID 412

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +E L E  ++    +    + ++ G Y   + LN A  ++  M
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGD-LNAALDLLQEM 456


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 244/521 (46%), Gaps = 7/521 (1%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    R  + W     L +EMR  G+ PD +T ST+I   G++G+ D A++
Sbjct: 213 PTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + ++       +V Y+ L+++  K  +Y++A+ +   ++ SG  PD V YN +   + 
Sbjct: 273 FFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYA 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A  F+EA   ++ M  +G+ P+T +Y+T++  Y    +  EAL++F  M +     ++ 
Sbjct: 333 RAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++  + G+         +   M + G  P+ V++NT+L V G+  +      +   M
Sbjct: 393 TYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGM 452

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +E +  TYNT+I  YG+      A  +  EM + G  P   TY+ ++ +  + G  
Sbjct: 453 KSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDW 512

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +  K+  +G + +   Y  ++  Y + G  A  + +  E+      P    +  L
Sbjct: 513 STAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTL 572

Query: 376 ARAG----RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             A     R+E     F++    G   D+ +F  M+ ++++N  Y+   E+F+ ++ +G 
Sbjct: 573 VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGL 632

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
            PD      +++ Y K  E   A+ +  +++    V  D V +  +++ +  +      +
Sbjct: 633 SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEAQ 691

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            +   + +D        +H + G Y      N+A  ++N M
Sbjct: 692 RILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/548 (22%), Positives = 238/548 (43%), Gaps = 42/548 (7%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L+ +  +  WE A  L       G A D      ++   G+EG  D     L +M    
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLPP 174

Query: 85  VSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKE 142
            S  D+  Y+ ++    +   Y +A+ +F+ L+  G+VP +V YN +++V+G+  + +  
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234

Query: 143 ARLLIEEMREQGVKPD-----------------------------------TVSYSTLLN 167
              L+EEMR  GV+PD                                    V+Y+ LL 
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           ++ +   + EAL V  EM +  C  D  T N +   Y +    ++A +   +M   G+ P
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 354

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +  +YNT++  Y       EA+ LF  M++     NV TYN +  + GK         ++
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +EM   G  PN +T++T++A+ GK G  D    +   ++S GVE+    Y T+I AY R 
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474

Query: 348 GLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G   +A ++  E+      P  T     + +L+R G    A  +  +    G   +   +
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ +++    A +  + +++     FP   I+  ++ +  K R  E  +  + E++ 
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           +G      +   ML++Y     ++    +F+ +           ++ +  +Y ++N   +
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654

Query: 524 ASRIMNRM 531
           A +I+ ++
Sbjct: 655 AEKILKQL 662



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 37/355 (10%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R  A+L+ + E +R   +P+   +N +L    +    +    + + M+  G+   R TY+
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           TLI+ +G+ G    A     +M     +  L  Y+ L+ +  +  D+S A SI S++  +
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525

Query: 119 GIVPDLVAYNTMINVFGKA------------------------------KLFKEARL--- 145
           G  P+  +Y+ ++  + K                                 FK  RL   
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585

Query: 146 --LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               +E++ QG KPD V ++++L +Y +N  + +A  +F  + +     DL T N ++D+
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y + + + +A+++   ++   + P VVSYNT++  + +  L  EA  +   M    +   
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 705

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           VVTY+T++  Y       +A  ++  M +  ++P  +TY  ++  + KA + D A
Sbjct: 706 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 92/175 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P +  +N +L    +   +  A  +FD ++Q G++PD  TY++L+  + K      A 
Sbjct: 597 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 656

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+Q++  +V  D+V Y+ +I    K     +A  I S + + G+ P +V Y+T++  +
Sbjct: 657 KILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 716

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
              ++F EAR ++  M    +KP  ++Y  +++ Y +  ++ EA    +E+++ +
Sbjct: 717 ASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTD 771


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 246/502 (49%), Gaps = 18/502 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++    K+G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 72  SAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           SA++ L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI PDL  YN+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++ EM     
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + MID + + +    A+ +F+ M   G  P+++++NTL+  Y  A+   + + 
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M    +  +  TYNT+I  +    +   A +L+QEM + G+ P+ +T  T++    
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 311 KAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             GKL  A  +F+ ++ S           GVE D   Y  +I      G    A+ L  E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +      P+TI   + I  L +  R++EAT +F          ++  F  +I  + +  +
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + +E+F +M   G   ++     ++  + K+     A D++ EM   G V+ D +  +
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG-VYPDTITIR 655

Query: 476 -MLSLYGARKDFNMLESLFERL 496
            ML+   ++++     ++ E+L
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKL 677



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 255/539 (47%), Gaps = 18/539 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+++F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITYS++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   + + + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + ++   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V     +  M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 610



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 222/448 (49%), Gaps = 29/448 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + Y++MI+ F K      A  +   M  +G  P+ ++++TL++ Y    +  + + +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ +TLL  
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD---LLQEMISSGLCPDIVTCDTLLDG 474

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F++MQ+ +           +E +V TYN +I      GK LE E+  
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE-- 532

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 533 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD- 399
            + G V     L  E+ +     N I   T I    + G I  A  +F++   +G   D 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMR 427
           I++   +  L+S+ ++    + + EK++
Sbjct: 652 ITIRNMLTGLWSK-EELKRAVAMLEKLQ 678



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + +  I+I  +        A   F  + K+G+ P VV++NTLL      +   EA++LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDF 486
            G  P++   + +++ + K    + A+ ++  M  +GC   + + F  L     GA++  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRID 412

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +E L E  ++    +    + ++ G Y   + LN A  ++  M
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGD-LNAALDLLQEM 456


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 246/502 (49%), Gaps = 18/502 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++    K+G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 72  SAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           SA++ L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI PDL  YN+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++ EM     
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + MID + + +    A+ +F+ M   G  P+++++NTL+  Y  A+   + + 
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M    +  +  TYNT+I  +    +   A +L+QEM + G+ P+ +T  T++    
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 311 KAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             GKL  A  +F+ ++ S           GVE D   Y  +I      G    A+ L  E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +      P+TI   + I  L +  R++EAT +F          ++  F  +I  + +  +
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + +E+F +M   G   ++     ++  + K+     A D++ EM   G V+ D +  +
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG-VYPDTITIR 655

Query: 476 -MLSLYGARKDFNMLESLFERL 496
            ML+   ++++     ++ E+L
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKL 677



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 255/539 (47%), Gaps = 18/539 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+++F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL++  +M EV+  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITYS++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   + + + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + ++   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V     +  M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 610



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 222/448 (49%), Gaps = 29/448 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   GI+
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + Y++MI+ F K      A  +   M  +G  P+ ++++TL++ Y    +  + + +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ +TLL  
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD---LLQEMISSGLCPDIVTCDTLLDG 474

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHEKAT 284
             +     +A+ +F++MQ+ +           +E +V TYN +I      GK LE E+  
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE-- 532

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I  Y
Sbjct: 533 -LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD- 399
            + G V     L  E+ +     N I   T I    + G I  A  +F++   +G   D 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMR 427
           I++   +  L+S+ ++    + + EK++
Sbjct: 652 ITIRNMLTGLWSK-EELKRAVAMLEKLQ 678



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + NI+I  +        A   F  + K+G+ P VV++ TLL      +   EA++LF 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDF 486
            G  P++   + +++ + K    + A+ ++  M  +GC   + + F  L     GA++  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRID 412

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +E L E  ++    +    + ++ G Y   + LN A  ++  M
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGD-LNAALDLLQEM 456


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 244/521 (46%), Gaps = 7/521 (1%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    R  + W     L +EMR  G+ PD +T ST+I   G++G+ D A++
Sbjct: 213 PTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVA 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + ++       +V Y+ L+++  K  +Y++A+ +   ++ SG  PD V YN +   + 
Sbjct: 273 FFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYA 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A  F+EA   ++ M  +G+ P+T +Y+T++  Y    +  EAL++F  M +     ++ 
Sbjct: 333 RAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++  + G+         +   M + G  P+ V++NT+L V G+  +      +   M
Sbjct: 393 TYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGM 452

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +E +  TYNT+I  YG+      A  +  EM + G  P   TY+ ++ +  + G  
Sbjct: 453 KSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDW 512

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +  K+  +G + +   Y  ++  Y + G  A  + +  E+      P    +  L
Sbjct: 513 STAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTL 572

Query: 376 ARAG----RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             A     R+E     F++    G   D+ +F  M+ ++++N  Y+   E+F+ ++ +G 
Sbjct: 573 VIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGL 632

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
            PD      +++ Y K  E   A+ +  +++    V  D V +  +++ +  +      +
Sbjct: 633 SPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEAQ 691

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            +   + +D        +H + G Y      N+A  ++N M
Sbjct: 692 RILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/548 (22%), Positives = 238/548 (43%), Gaps = 42/548 (7%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L+ +  +  WE A  L       G A D      ++   G+EG  D     L +M    
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLPP 174

Query: 85  VSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKE 142
            S  D+  Y+ ++    +   Y +A+ +F+ L+  G+VP +V YN +++V+G+  + +  
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234

Query: 143 ARLLIEEMREQGVKPD-----------------------------------TVSYSTLLN 167
              L+EEMR  GV+PD                                    V+Y+ LL 
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           ++ +   + EAL V  EM +  C  D  T N +   Y +    ++A +   +M   G+ P
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 354

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +  +YNT++  Y       EA+ LF  M++     NV TYN +  + GK         ++
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +EM   G  PN +T++T++A+ GK G  D    +   ++S GVE+    Y T+I AY R 
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474

Query: 348 GLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G   +A ++  E+      P  T     + +L+R G    A  +  +    G   +   +
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ +++    A +  + +++     FP   I+  ++ +  K R  E  +  + E++ 
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           +G      +   ML++Y     ++    +F+ +           ++ +  +Y ++N   +
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654

Query: 524 ASRIMNRM 531
           A +I+ ++
Sbjct: 655 AEKILKQL 662



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 163/355 (45%), Gaps = 37/355 (10%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R  A+L+ + E +R   +P+   +N +L    +    +    + + M+  G+   R TY+
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           TLI+ +G+ G    A     +M     +  L  Y+ L+ +  +  D+S A SI S++  +
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525

Query: 119 GIVPDLVAYNTMINVFGKA------------------------------KLFKEARL--- 145
           G  P+  +Y+ ++  + K                                 FK  RL   
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585

Query: 146 --LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               +E++ QG KPD V ++++L +Y +N  + +A  +F  + +     DL T N ++D+
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y + + + +A+++   ++   + P VVSYNT++  + +  L  EA  +   M    +   
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 705

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           VVTY+T++  Y       +A  ++  M +  ++P  +TY  ++  + KA + D A
Sbjct: 706 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 92/175 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P +  +N +L    +   +  A  +FD ++Q G++PD  TY++L+  + K      A 
Sbjct: 597 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 656

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+Q++  +V  D+V Y+ +I    K     +A  I S + + G+ P +V Y+T++  +
Sbjct: 657 KILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 716

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
              ++F EAR ++  M    +KP  ++Y  +++ Y +  ++ EA    +E+++ +
Sbjct: 717 ASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTD 771


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 223/460 (48%), Gaps = 5/460 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           ++   SPS+  YNV+L    +  + W+    L DEMR  G+  D +T ST+I+  G+EG+
Sbjct: 259 KDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGL 318

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A  +  +++        V Y+ L+++  K   YS+A++I   ++ +    D V YN 
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++  + +A  ++E   +I+ M  +GV P+ V+Y+T++N Y    K V+AL +F +M +  
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T N ++ + G+   +++  ++   MR  G  P+ +++NTLL + G+        
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVN 498

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           H+FR M+    E    T+NT+I  YG+      A  +  EM   G  P A TY+ ++   
Sbjct: 499 HVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNAL 558

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G    A  +   +R+ G + +   +  M+  Y + G V   +R+  ++      P  
Sbjct: 559 ARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSW 618

Query: 370 TAITILARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
             +  L  A     A     +AF+     G   D+ +F  M+ +F++N  Y    ++ + 
Sbjct: 619 VLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDL 678

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +R +G  PD      ++N Y +  E   A+++   + + G
Sbjct: 679 IRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSG 718



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 249/527 (47%), Gaps = 7/527 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-MFDS 72
           +YS  V A   +L    R  +++ A  +F+ M+  G++P   TY+ ++  +GK G  +D 
Sbjct: 227 KYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDK 286

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +  L +M  + +  D    S +I    +    ++A   F  LKSSG  P  V YN ++ 
Sbjct: 287 ILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQ 346

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           VFGKA ++ EA  +++EM +     D+V+Y+ L+  YV    + E  +V   M       
Sbjct: 347 VFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMP 406

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +I+ YG+      A +LF  M+K G  P+V +YN++L + G+     E I + 
Sbjct: 407 NAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKIL 466

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+      N +T+NT++ + G   +H+   ++ +EM+N G EP   T++T+I+ +G+ 
Sbjct: 467 SDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRC 526

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G    AA ++ ++  +G       Y  ++ A  R G    A+ +L ++R     P ET+ 
Sbjct: 527 GSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSF 586

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           +++    A+ G +     + +  +D        +   +I    + +    +   FE++  
Sbjct: 587 SLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMK 646

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            GY PD  I   +L+ + K   +E A  +   ++E G       +  ++++Y  R +   
Sbjct: 647 NGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWK 706

Query: 489 LESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            E + + L  S  + +    + ++ G + R   + +A R+M+ M  R
Sbjct: 707 AEEILKGLIKSGESPDLVSYNTIIKG-FCRQGLMQEAIRVMSEMTTR 752



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 244/502 (48%), Gaps = 14/502 (2%)

Query: 2   SVAILDWINEEARYSPSVF--AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           S    ++ ++E R  P  F     + L N + A+ ++  + LFD ++   +  D  +   
Sbjct: 107 SAPQFEYSDKEIRDGPLQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELLEVDIVSLLK 166

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL----SDYSKAISIFSRL 115
            +   GK    + AI   + +  + VSGD+ L S  +EL  ++    S YS A+ +  ++
Sbjct: 167 ALDVLGKS---ERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKI 223

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHK 174
                  D+ A  T+++ + +   +K+A  + E M++ G+ P  V+Y+ +L++Y +    
Sbjct: 224 PIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRS 283

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           + + L +  EM       D  TC+ +I   G+  +  +A   F  ++  G +P  V+YN 
Sbjct: 284 WDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNA 343

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL+V+G+A ++ EA+++ + M+      + VTYN ++  Y ++  +E+   ++  M  +G
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PNA+TY+T+I  +G+AGK  +A  LF +++ SG   +   Y +++    +        
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMI 463

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           ++L ++R     PN I   T + +    G+ +    VFR+  + G       F  +I  +
Sbjct: 464 KILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAY 523

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R     +  +++++M  AG+ P +     +LN+  +  +++ A+ +  +M+ +G   ++
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNE 583

Query: 471 QVHFQMLSLYGARKDFNMLESL 492
                ML  Y    +   LE +
Sbjct: 584 TSFSLMLHCYAKGGNVRGLERI 605



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 205/458 (44%), Gaps = 8/458 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L+   +A  +  A  +  EM       D  TY+ L+  + + G ++   
Sbjct: 334 YEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGA 393

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + +  M +  V  + V Y+ +I    +     KA+ +F+++K SG VP++  YN+++ + 
Sbjct: 394 TVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALL 453

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE--NHKFVEALSVFAEMNEVNCPL 192
           GK    +E   ++ +MR  G  P+ ++++TLL +  +   HKFV    VF EM       
Sbjct: 454 GKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVN--HVFREMKNCGFEP 511

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N +I  YG+     DA +++  M K G  P   +YN LL        +  A  + 
Sbjct: 512 GKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVL 571

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+ K  + N  +++ M+  Y K         + +++ +  I P+ +   T+I    K 
Sbjct: 572 LDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKC 631

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
             +      F++L  +G + D V++ +M+  + +  +   A+++L  +R    QP+ +  
Sbjct: 632 RAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTY 691

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + + + AR G   +A  + +    +GE  D+  +  +I+ F R       I V  +M +
Sbjct: 692 NSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTT 751

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            G  P        ++ Y     F   D++ S M ++ C
Sbjct: 752 RGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNC 789



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A ++P    YN +L  + R   W+ A  +  +MR +G  P+  ++S ++ C+ K G   
Sbjct: 541 KAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGG--- 597

Query: 72  SAISWLQQMEQDRVSGDL----VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
             +  L+++ +D   G +    VL   LI    K          F  L  +G  PD+V +
Sbjct: 598 -NVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIF 656

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N+M+++F K  +++ A+ +++ +RE G++PD V+Y++L+N+Y    +  +A  +   + +
Sbjct: 657 NSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIK 716

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                DL + N +I  + +  + ++A R+   M   GI P + +YNT +  Y    +F E
Sbjct: 717 SGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAE 776

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
              +   M +K  + N +TY  ++  Y K+ +++ A + +  ++N
Sbjct: 777 VDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKN 821



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 36/179 (20%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  +LD I E     P +  YN ++    R  +   A  +   + + G +PD  +Y+T+
Sbjct: 671 RAQKMLDLIRESG-LQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTI 729

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  F ++G+                                     +AI + S + + GI
Sbjct: 730 IKGFCRQGLM-----------------------------------QEAIRVMSEMTTRGI 754

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P +  YNT ++ +    +F E   +I  M ++  KP+ ++Y  +++ Y +  K+ +A+
Sbjct: 755 CPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAM 813


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 247/531 (46%), Gaps = 40/531 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++  +N +L  V +A + E A  +  EM ++G+ PD  TYS LI    +      A   L
Sbjct: 345 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M++ +++  ++ YS +I    +  +     +I   +  +G+ P+ V Y T++    K 
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 464

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +E+R+++E MREQG+ PD   Y++L+  + +  +  EA +   EM E     +  T 
Sbjct: 465 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              ID Y +    + ADR F  M   G+ P+V  Y  L+  + +     EA  +FR +  
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILS 584

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + + Q+V TY+ +I    ++ +  +A  +  E+Q +G+ PNA TY+++I+   K G +D+
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A+ L +++   G+  D V Y  +I                                 L +
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDG-------------------------------LCK 673

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           AG IE A  +F      G   +   +  M++ + ++K      ++ E+M   G  PD+ I
Sbjct: 674 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 733

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML----SLYGARKDFN-MLESL 492
             ++LN   K  +FE A DL+ EM E+G  F+  V F  L       G  ++ N +LE +
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEM 791

Query: 493 FERLDSDSNINKKEL--HHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
            E+    +++    L  H+  AG+   A RL    +  N M   +T+ S L
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 217/456 (47%), Gaps = 24/456 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS+ + N +L ++L+  + EL   +FD M    + PD YTY+ +I+   K G    A 
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244

Query: 75  SWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             L +M E+ R      L    IEL R + D              G+VPDL  Y+ +IN 
Sbjct: 245 RVLLEMGEKAR------LLDEAIELKRSMVD-------------KGLVPDLYTYDILING 285

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F   K  +EA+L++ EM + G+KP+ ++Y+ L++ ++      +A  +  EM       +
Sbjct: 286 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEAN 345

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L   N +++   +    + A  +   M + G++P   +Y+ L+  +   +    A  L  
Sbjct: 346 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 405

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+++++   V+TY+ +I    +    +    +++EM   G++PNA+ Y+T++    K G
Sbjct: 406 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           +++ + M+ +++R  G+  D   Y ++I+ + +   +  A+  L E+ +    PN     
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 525

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I   ++AG +E A   F +    G + ++ ++  +IE   +         VF  + S 
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               D    +++++   +  +   A  ++SE+QE+G
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 199/411 (48%), Gaps = 51/411 (12%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  Y+V++  + R  +   A G+F E++++G+ P+ +TY++LI+   K+G  D A   L+
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M    ++ D+V Y+ LI+   K  +  +A ++F  ++  G+ P+ V Y  M++ + K+K
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A  L+EEM  +GV PD   Y+ +LN   +  KF +AL +F EM E           
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE----------- 759

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
                           + F          S VS+NTL+  Y ++    EA HL   M  K
Sbjct: 760 ----------------KGF---------ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK 794

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +   N VTY ++I    K+    +A  L  EMQ R + P A TY++++  +   G +   
Sbjct: 795 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 854

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA------- 371
           + LF+++ + G+E D + Y  MI AY R G V  A +L  E+     +P ++        
Sbjct: 855 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG-MPMKSGFRLGLPT 913

Query: 372 ITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
            +++AR    AG ++EA  V R     G V + +  G   +L   N+  AN
Sbjct: 914 CSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLG---DLVDGNQNGAN 961



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 231/509 (45%), Gaps = 35/509 (6%)

Query: 17  PSVFAYNVVLR------NVLRAKQWELAHG----LFDE-------MRQRGIAPDRYTYST 59
           P V+ Y  ++       NV  AK+  L  G    L DE       M  +G+ PD YTY  
Sbjct: 222 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDI 281

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI  F  E     A   L +M    +  + + Y+ LI+   +  D  +A  I   + + G
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I  +L+ +NT++N   KA   ++A  +++EM E+GV+PD+ +YS L+  +        A 
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM +      + T +++I+   +    +  + +   M   G+ P+ V Y TL+  +
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +     E+  +   M+ + I  +V  YN++I  + K+   E+A   + EM  R + PNA
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA------ 353
            TY   I  + KAG+++ A   F ++ S GV  +  +Y  +I  + + G V  A      
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581

Query: 354 ---KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
              +R+L +++  + +     I  L+R G++ EA  +F +  + G + +   +  +I   
Sbjct: 582 ILSRRVLQDVQTYSVL-----IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            +        ++ E+M   G  PD     ++++   K  E E A +L+ +++  G   + 
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696

Query: 471 QVHFQMLSLYGARKD----FNMLESLFER 495
             +  M+  Y   K+    F +LE +  R
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 223/504 (44%), Gaps = 41/504 (8%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  +LD + +  + +P+V  Y+V++  + R    +  + +  EM   G+ P+   Y+TL
Sbjct: 399 RAFELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI---------ELARK---------- 101
           +T   KEG  + +   L++M +  +  D+  Y++LI         E AR           
Sbjct: 458 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517

Query: 102 ----------LSDYSKAISI------FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
                     +  YSKA  +      F+ + S G++P++  Y  +I    K     EA  
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           +   +  + V  D  +YS L++    N K  EA  +F+E+ E     +  T N +I    
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +      A +L   M   GI+P +V+YN L+    +A     A +LF  ++ + +  N V
Sbjct: 638 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 697

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY  M+  Y KS     A  L++EM  RG+ P+A  Y+ I+    K  K ++A  LFQ++
Sbjct: 698 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 757

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRI 381
              G     V + T+I  Y + G +  A  LL E+ +   IP     T L     +AG +
Sbjct: 758 LEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  ++ +  +   +     +  ++  +      + V  +FE+M + G  PD     ++
Sbjct: 817 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 876

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           +++Y +      A  L  E+  +G
Sbjct: 877 IDAYCREGNVMEACKLKDEILVKG 900



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/472 (22%), Positives = 216/472 (45%), Gaps = 25/472 (5%)

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           S + V++  L++  RK+    +A+++F   K+    P L++ N+++    K    +    
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE---------------VNC 190
           + + M    V PD  +Y+ +++ + +     +A  V  EM E               V+ 
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 191 PL--DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            L  DL T +I+I+ +     +++A  +   M  +G+ P  ++YN L+  +       +A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +   M    IE N++ +NT++    K+ + EKA  +MQEM  +G+EP++ TYS +I  
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
             +   + RA  L  +++   +    + Y  +I    R G +     +L E+     +PN
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   T +T  A+ GR+EE+  +  +  + G + D+  +  +I  F + K+         
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
           +M      P++H     ++ Y K  E E AD  ++EM   G + +  ++  ++   G  K
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCK 568

Query: 485 DFNMLE--SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           + N+ E  S+F  + S   +   + + V+     R  ++++A  I + + ++
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F YNV+L    + +++E A  LF EM ++G A    +++TLI  + K G    A   
Sbjct: 729 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHL 787

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M + +   + V Y++LI+   K     +A  ++  ++   ++P    Y ++++ +  
Sbjct: 788 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 847

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP----- 191
                E   L EEM  +G++PD ++Y  +++ Y      +EA  +  E+     P     
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGF 907

Query: 192 -LDLTTCNIM---IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            L L TC+++     + G +D A +  R   SM K G   +  S   L+
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLR---SMVKFGWVSNTTSLGDLV 953


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 252/525 (48%), Gaps = 11/525 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P  + YN+++   L++     A  L  EM+ R + P  +TYS LI+          
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L QM ++ V  ++ +Y  LI+   + S Y  AI +   + ++G++PDL  YN +I 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +AK  +EA++L+ +M E+G+KP+  +Y   +NLY ++ +   A   F +M       
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +     I+I  +  +    +A   F  M + G+ P + +Y+ ++    +     EA+ +F
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
               +  +  +V  YN++I  + K  + EKA+ L  EM + GI PN + Y+T+I    K 
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G++ +A  LF ++    +  D V Y T+I  Y + G +  A +L  E+      P     
Sbjct: 710 GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            IL     + G +E+A  +F +A     V  +S F  +I+ F ++ K     E+F+ M  
Sbjct: 770 CILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKD 485
               P+     +++++YGK    E A+ L+ +M+    + +   +  +L  Y   G R  
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR-- 886

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
           F M+ SLF+ +++         + V+A  Y +  +  +A +++N+
Sbjct: 887 FKMI-SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 238/493 (48%), Gaps = 8/493 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN  +  + +    + A  +   M ++G+ PD +TY+ L+  F K+    
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M    ++ +   Y+ LI+   K  +  +A+ I   + + G+  ++V YN MI
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               KA    +A  L  EM   G++PDT +Y+ L++ Y+++H   +A  + AEM      
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T +++I         + A+ +   M + G+ P+V  Y TL++ Y +   +  AI L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            ++M    +  ++  YN +I    ++ + E+A  L+ +M  +GI+PNA TY   I ++ K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +G++  A   F+ + SSG+  + V+Y  +I  +  VG    A      + +   IP   A
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L++ G+ +EA  VF +    G V D+ ++  +I  F +        +++++M 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  P+  +   ++N   KL E   A +L+ E++E+  V  D V +  + + G  K  N
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV-PDVVTYSTI-IDGYCKSGN 746

Query: 488 MLES--LFERLDS 498
           + E+  LF+ + S
Sbjct: 747 LTEAFKLFDEMIS 759



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/556 (22%), Positives = 233/556 (41%), Gaps = 40/556 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++   N ++R++L+A    L   ++  M +  I PD YTY+ +I    K G      
Sbjct: 203 FFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGK 262

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +ME++    +L  Y+  I    +     +A+ +   +   G+ PD   Y  +++ F
Sbjct: 263 MVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K  KEA+L+ E M   G+ P+  +Y+ L++ +++     EAL +  EM      L++
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N MI    +      A  LF  M   G++P   +YN L+  Y ++    +A  L   
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 255 MQ-----------------------------------RKEIEQNVVTYNTMIKIYGKSLE 279
           M+                                   R  ++ NV  Y T+IK Y +   
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           +E A  L++ M   G+ P+   Y+ +I    +A K++ A ML   +   G++ +   Y  
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAG 395
            I  Y + G +  A+R   ++     +P     TIL +     G   EA   F+   + G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            + DI  +  +I   S+N K    + VF K    G  PD  +   +++ + K  + E A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
            LY EM   G   +  V+  +++      +      LF+ ++    +     +  +   Y
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741

Query: 516 ERANRLNDASRIMNRM 531
            ++  L +A ++ + M
Sbjct: 742 CKSGNLTEAFKLFDEM 757



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 208/449 (46%), Gaps = 40/449 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-------- 68
           P +F YN ++  + RAK+ E A  L  +M ++GI P+ +TY   I  + K G        
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 69  ---MFDS------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
              M  S                        A+S  + M +  +  D+  YS +I    K
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                +A+ +F +   +G+VPD+  YN++I+ F K    ++A  L +EM   G+ P+ V 
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+N   +  +  +A  +F E+ E +   D+ T + +ID Y +     +A +LF  M 
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMI 758

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P    Y  L+   G+     +A+ LF   Q+K +  ++  +N++I  + K  +  
Sbjct: 759 SKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVI 817

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L  +M ++ + PN +TY+ +I  +GKA  ++ A  LF  + +  +  + + Y +++
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 877

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEV 397
           ++Y ++G       L  ++          A  ++A A    G+  EA  +  ++   G  
Sbjct: 878 LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 937

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKM 426
            +  VF  +I    + K+ + V+E+  +M
Sbjct: 938 LEDDVFDALIFHLCKEKQISTVLELLSEM 966



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 191/401 (47%), Gaps = 40/401 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P + AY+ ++ ++ +  + + A G+F +  + G+ PD + Y++LI+ F KEG  + A   
Sbjct: 624  PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +M  + ++ ++V+Y+ LI    KL + +KA  +F  ++   +VPD+V Y+T+I+ + K
Sbjct: 684  YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSY---------------------------------- 162
            +    EA  L +EM  +G+ PD   Y                                  
Sbjct: 744  SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 803

Query: 163  STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            ++L++ + ++ K +EA  +F +M +     ++ T  I+ID YG+ +M ++A++LF  M  
Sbjct: 804  NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863

Query: 223  MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLE 279
              I P+ ++Y +LL  Y +     + I LF+ M+ + I  + + Y  M   Y   GKSLE
Sbjct: 864  RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
               A  L+ +    GI+     +  +I    K  ++     L  ++    + +      T
Sbjct: 924  ---ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 980

Query: 340  MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
            +++ + + G    A ++L  +++   +P   ++T     GR
Sbjct: 981  LLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGR 1021



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 201/465 (43%), Gaps = 22/465 (4%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRV-----------------SGDLVLYSNLIE 97
           ++YS L       G+   A + L+++ Q R                    +L ++   I+
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
             R L   ++A S+F    S G  P L+  N ++    KA +      +   M E  + P
Sbjct: 181 KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D  +Y+ ++  + +    ++   V +EM E  C  +L T N  I    Q     +A  + 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M + G+ P   +Y  L+  + + +   EA  +F  M    +  N  TY  +I  + K 
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              E+A  +  EM  RG++ N +TY+ +I    KAG++ +A  LF ++  +G+E D   Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 419

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  Y +   +A A  LL E++     P+       I+ L  +  +++A  V  Q   
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   ++ ++G +I+ + +  +Y   IE+ + M + G  PD      ++    + ++ E 
Sbjct: 480 NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 539

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           A  L  +M E+G   +   +   ++LY    +  + E  F+ + S
Sbjct: 540 AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 1/297 (0%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            EE    P V  Y+ ++    ++     A  LFDEM  +GI+PD Y Y  LI   GKEG  
Sbjct: 723  EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A+S   + +Q  V G L  +++LI+   K     +A  +F  +    + P++V Y  +
Sbjct: 783  EKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 841

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I+ +GKA++ +EA  L  +M  + + P+T++Y++LL  Y +     + +S+F +M     
Sbjct: 842  IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 901

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              D     +M   Y +   + +A +L       GI      ++ L+    + +     + 
Sbjct: 902  ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 961

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            L   M ++E+  +  T NT++  + KS   ++A+ ++  MQ  G  P +++ +  I+
Sbjct: 962  LLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 1018


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 245/527 (46%), Gaps = 40/527 (7%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N +L  V +A + E A  +  EM ++G+ PD  TYS LI    +      A   L +M+
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + +++  ++ YS +I    +  +     +I   +  +G+ P+ V Y T++    K    +
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           E+R+++E MREQG+ PD   Y++L+  + +  +  EA +   EM E     +  T    I
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D Y +    + ADR F  M   G+ P+V  Y  L+  + +     EA  +FR +  + + 
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           Q+V TY+ +I    ++ +  +A  +  E+Q +G+ PNA TY+++I+   K G +D+A+ L
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 657

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            +++   G+  D V Y  +I                                 L +AG I
Sbjct: 658 LEEMCIKGINPDIVTYNILIDG-------------------------------LCKAGEI 686

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E A  +F      G   +   +  M++ + ++K      ++ E+M   G  PD+ I  ++
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML----SLYGARKDFN-MLESLFERL 496
           LN   K  +FE A DL+ EM E+G  F+  V F  L       G  ++ N +LE + E+ 
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 497 DSDSNINKKEL--HHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
              +++    L  H+  AG+   A RL    +  N M   +T+ S L
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 222/455 (48%), Gaps = 4/455 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS+ + N +L ++L+  + EL   +FD M    + PD YTY+ +I+   K G    A 
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M +   S +LV Y+ +I    +     +AI +   +   G+VPDL  Y+ +IN F
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              K  +EA+L++ EM + G+KP+ ++Y+ L++ ++      +A  +  EM       +L
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +++   +    + A  +   M + G++P   +Y+ L+  +   +    A  L   
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++++   V+TY+ +I    +    +    +++EM   G++PNA+ Y+T++    K G+
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           ++ + M+ +++R  G+  D   Y ++I+ + +   +  A+  L E+ +    PN      
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I   ++AG +E A   F +    G + ++ ++  +IE   +         VF  + S  
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              D    +++++   +  +   A  ++SE+QE+G
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 232/497 (46%), Gaps = 18/497 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP++  YNV++  + RA+  + A  L   M  +G+ PD YTY  LI  F  E    
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M    +  + + Y+ LI+   +  D  +A  I   + + GI  +L+ +NT++
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   KA   ++A  +++EM E+GV+PD+ +YS L+  +        A  +  EM +    
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 422

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             + T +++I+   +    +  + +   M   G+ P+ V Y TL+  + +     E+  +
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M+ + I  +V  YN++I  + K+   E+A   + EM  R + PNA TY   I  + K
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA---------KRLLHELRQ 362
           AG+++ A   F ++ S GV  +  +Y  +I  + + G V  A         +R+L +++ 
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            + +     I  L+R G++ EA  +F +  + G + +   +  +I    +        ++
Sbjct: 603 YSVL-----IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 657

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
            E+M   G  PD     ++++   K  E E A +L+ +++  G   +   +  M+  Y  
Sbjct: 658 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 717

Query: 483 RKD----FNMLESLFER 495
            K+    F +LE +  R
Sbjct: 718 SKNPTAAFQLLEEMLLR 734



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 203/404 (50%), Gaps = 8/404 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  Y+V++  + R  +   A G+F E++++G+ P+ +TY++LI+   K+G  D A   L+
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M    ++ D+V Y+ LI+   K  +  +A ++F  ++  G+ P+ V Y  M++ + K+K
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A  L+EEM  +GV PD   Y+ +LN   +  KF +AL +F EM E      ++  N
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF-N 778

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+ Y +    ++A+ L   M +    P+ V+Y +L+    +A + GEA  L+  MQ +
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +     TY +++  Y       + + L +EM  +GIEP+ +TY  +I  + + G +  A
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR- 377
             L  ++   G+ +    Y  +I A  +        +LL+E+ +          +++AR 
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958

Query: 378 ---AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              AG ++EA  V R     G V + +  G   +L   N+  AN
Sbjct: 959 FQIAGNMDEAAEVLRSMVKFGWVSNTTSLG---DLVDGNQNGAN 999



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 209/446 (46%), Gaps = 8/446 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E R  P+   Y   +    +A + E+A   F+EM   G+ P+   Y+ LI    KEG   
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S  + +   RV  D+  YS LI    +     +A  IFS L+  G++P+   YN++I
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K     +A  L+EEM  +G+ PD V+Y+ L++   +  +   A ++F ++      
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T   M+D Y +      A +L   M   G+ P    YN +L    + E F +A+ L
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M  K    + V++NT+I+ Y KS + ++A +L++EM  +   PN +TY+++I    K
Sbjct: 763 FQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
           AG +  A  L+ +++   V      Y +++  Y  +G ++    L  E+     +P+ + 
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I    R G + EA  +  +    G    ++ +  +I+   + +++  V+++  ++ 
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941

Query: 428 SAGY---FPDSHIIALVLNSYGKLRE 450
            +G+    P   +IA      G + E
Sbjct: 942 ESGFRLGLPTCSVIARGFQIAGNMDE 967



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/572 (23%), Positives = 249/572 (43%), Gaps = 41/572 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  +LD + +  + +P+V  Y+V++  + R    +  + +  EM   G+ P+   Y+TL
Sbjct: 408 RAFELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 466

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI---------ELARK---------- 101
           +T   KEG  + +   L++M +  +  D+  Y++LI         E AR           
Sbjct: 467 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 526

Query: 102 ----------LSDYSKAISI------FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
                     +  YSKA  +      F+ + S G++P++  Y  +I    K     EA  
Sbjct: 527 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 586

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           +   +  + V  D  +YS L++    N K  EA  +F+E+ E     +  T N +I    
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +      A +L   M   GI+P +V+YN L+    +A     A +LF  ++ + +  N V
Sbjct: 647 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCV 706

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY  M+  Y KS     A  L++EM  RG+ P+A  Y+ I+    K  K ++A  LFQ++
Sbjct: 707 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRI 381
              G     V + T+I  Y + G +  A  LL E+ +   IP     T L     +AG +
Sbjct: 767 LEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  ++ +  +   +     +  ++  +      + V  +FE+M + G  PD     ++
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +++Y +      A  L  E+  +G   S   +  ++     +++F  +  L   +     
Sbjct: 886 IDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGF 945

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                   V+A  ++ A  +++A+ ++  M K
Sbjct: 946 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/490 (21%), Positives = 216/490 (44%), Gaps = 43/490 (8%)

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           S + V++  L++  RK+    +A+++F   K+    P L++ N+++    K    +    
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           + + M    V PD  +Y+ +++ + +     +A  V  EM E  C  +L T N++I    
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +  +  +A  L  SM   G+ P + +Y+ L+  +   +   EA  +   M    ++   +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TYN +I  + +  + E+A  +  EM   GIE N I ++T++    KAGK+++A  + Q++
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR------------------------ 361
              GVE D   Y  +I  + R   +A A  LL E++                        
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441

Query: 362 ---------------QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
                          +PN +   T +T  A+ GR+EE+  +  +  + G + D+  +  +
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F + K+         +M      P++H     ++ Y K  E E AD  ++EM   G 
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561

Query: 467 VFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           + +  ++  ++   G  K+ N+ E  S+F  + S   +   + + V+     R  ++++A
Sbjct: 562 LPNVGIYTALIE--GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 525 SRIMNRMNKR 534
             I + + ++
Sbjct: 620 FGIFSELQEK 629



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 124/274 (45%), Gaps = 1/274 (0%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P  F YNV+L    + +++E A  LF EM ++G A    +++TLI  + K G    A   
Sbjct: 738  PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHL 796

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            L++M + +   + V Y++LI+   K     +A  ++  ++   ++P    Y ++++ +  
Sbjct: 797  LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 856

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 E   L EEM  +G++PD ++Y  +++ Y      +EA  +  E+     P+ +  
Sbjct: 857  IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             + +I    + +   +  +L   + + G    + + + + R +  A    EA  + R M 
Sbjct: 917  YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
            +     N  +   ++         E + NL+++M
Sbjct: 977  KFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 1/161 (0%)

Query: 8   WIN-EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W+  +E    P+   Y  +L              LF+EM  +GI PD+ TY  +I  + +
Sbjct: 832 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 891

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           EG    A     ++    +   +  Y  LI+   K  ++ + + + + +  SG    L  
Sbjct: 892 EGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
            + +   F  A    EA  ++  M + G   +T S   L++
Sbjct: 952 CSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 202/419 (48%), Gaps = 31/419 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP    YN +L    R   +  A  +F +M  RG++PD  ++S+LI    + G  D A+ 
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALM 346

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + M+   +  D V+Y+ LI    +    S+A+ I  ++   G   D+VAYNT++N   
Sbjct: 347 YFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC 406

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K KL  +A  L +EM E+GV PD  +++TL++ + +     +ALS+F  M + N   D+ 
Sbjct: 407 KKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+ID + +    + A+ L+  M    I P+ +SY  L+  Y       EA  L+  M
Sbjct: 467 TYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEM 526

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            RK I+  +VT NT+IK Y +S +  KA   + +M + G+ P++ITY+T+I  + K   +
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYM 586

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D+A  L  K+ + G++ D V Y  ++  +                               
Sbjct: 587 DKAFFLINKMETKGLQPDVVTYNVILNGF------------------------------- 615

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            R GR++EA  + R+  + G   D S +  +I  +             ++M   G+ PD
Sbjct: 616 CRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 219/456 (48%), Gaps = 4/456 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN ++    R      A  + + M  +G+ P  +TY+ +I    K+G +  A     
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M    +S D   Y+ L+  + + +++ +A  IFS +   G+ PDL++++++I V  +  
Sbjct: 280 EMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNG 339

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              +A +   +M+  G+ PD V Y+ L+N Y  N    EAL +  +M E  C LD+   N
Sbjct: 340 HLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN 399

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +++   +  +  DA+ LF  M + G+ P   ++ TL+  + +    G+A+ LF +M +K
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK 459

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I+ ++VTYN +I  + K+ E EKA  L  EM +R I PN I+Y+ ++  +   G +  A
Sbjct: 460 NIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEA 519

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITI 374
             L+ ++   G++   V   T+I  Y R G ++ A     +++ E   P++I   T I  
Sbjct: 520 FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +   +++A ++  +    G   D+  +  ++  F R  +      +  KM   G  PD
Sbjct: 580 FVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPD 639

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                 ++N Y      + A   + EM + G V  D
Sbjct: 640 RSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 202/452 (44%), Gaps = 4/452 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+ A N +L  +++    +LA  +++E+ + GI  + YT + ++    K+   D    +L
Sbjct: 149 SINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFL 208

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             MEQ  +  D+V Y+ LI    +     +A  + + +   G+ P L  YN +IN   K 
Sbjct: 209 IDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKK 268

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             +  A+ +  EM   G+ PDT +Y+TLL     N+ F+EA  +F++M       DL + 
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I V  +      A   F  M+  G+ P  V Y  L+  Y    +  EA+ +   M  
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +    +VV YNT++    K      A  L  EM  RG+ P+  T++T+I    K G + +
Sbjct: 389 QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK 448

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  LF  +    ++ D V Y  +I  + +   +  A  L +E+      P   +  IL  
Sbjct: 449 ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508

Query: 378 A----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                G + EA  ++ +    G    +     +I+ + R+   +   E   KM S G  P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           DS     ++N + K    + A  L ++M+ +G
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKG 600



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/413 (21%), Positives = 194/413 (46%), Gaps = 10/413 (2%)

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           + +S IS       D +  DL++ S +   ARKL++ +    I  R    G +  + A N
Sbjct: 100 IVESLISMSSTCGVDNLVFDLLIRSYV--QARKLNEGTDTFKILRR---KGFLVSINACN 154

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           +++    K      A  +  E+   G++ +  + + ++N   ++HK  +      +M + 
Sbjct: 155 SLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQK 214

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D+ T N +I+ Y +  +  +A  +  SM   G+ P++ +YN ++    +   +  A
Sbjct: 215 GIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M    +  +  TYNT++    ++    +A ++  +M +RG+ P+ I++S++I +
Sbjct: 275 KGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPN 364
             + G LD+A M F+ +++SG+  D V+Y  +I  Y R G+++ A     ++L +    +
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   T +  L +   + +A  +F +  + G V D   F  +I    +       + +F 
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            M      PD     ++++ + K  E E A++L++EM     +F + + + +L
Sbjct: 455 IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK-IFPNHISYAIL 506



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 31/339 (9%)

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D + +  L+  YV+  K  E    F  +      + +  CN ++    ++     A  ++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             + + GI+ +V + N ++    +     +       M++K I  ++VTYNT+I  Y + 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
               +A  +M  M  +G++P   TY+ +I    K G+  RA  +F ++ S G+  D   Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
            T++V                                  R     EA  +F      G  
Sbjct: 294 NTLLVES-------------------------------CRNNNFLEAKDIFSDMLHRGVS 322

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  F  +I + SRN      +  F  M+++G  PD+ I  +++N Y +      A ++
Sbjct: 323 PDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEI 382

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             +M E+GC      +  +L+    +K      +LF+ +
Sbjct: 383 RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421


>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 238/523 (45%), Gaps = 49/523 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P    YN ++    RA QW  A  + D+M +  I P R TY+ LI   G  G +
Sbjct: 177 QKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 236

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++  ++M  + V  DLV ++ ++   +  + YSKA+S F  +K + I PD   +N +
Sbjct: 237 KEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNII 296

Query: 131 INVFGKAKLFKEARLLIEEMRE-------------------------------------Q 153
           I+   K K + +A  +   M+E                                     +
Sbjct: 297 IHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAE 356

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+KP+ VSY+ LL  Y       EAL VF E+ +     D+ +   +++ YG+    + A
Sbjct: 357 GLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKA 416

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  +++  + P++VSYN L+  YG   L  +AI + R M++ +I  NVV+  T++  
Sbjct: 417 REIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAA 476

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+  +  K   ++   + RGI+ N + Y++ I  +   G+ D+A  L+  +R   ++ D
Sbjct: 477 CGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSD 536

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHE---LRQPNTIPRETAITIL-------ARAGRIEE 383
            V Y  +I    ++     A   + E   L+ P  + +E   +I+       +  G+I E
Sbjct: 537 SVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP--MSKEVYSSIICAYSKQASALGQIIE 594

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A   F      G   D+  +  M++ ++  +K+  +  +FE+M       D+   A ++ 
Sbjct: 595 AESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMR 654

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           ++ K  +      L   M+E+    SD + F+M+S  G   D+
Sbjct: 655 AFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDW 697



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/505 (22%), Positives = 238/505 (47%), Gaps = 10/505 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +  W+  +  Y      YN+++R   R  + + A GLF EM++    PD  TY+ LI   
Sbjct: 136 VFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAH 195

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G +  A++ +  M +  +      Y+NLI       ++ +A+++  ++  +G+ PDL
Sbjct: 196 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 255

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +N M+  F     + +A    E ++   ++PDT +++ +++  V+  ++ +A+ +F  
Sbjct: 256 VTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNS 315

Query: 185 MNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           M E    C  D+ T   MI +Y      ++ +  F  M   G+ P++VSYN LL  Y   
Sbjct: 316 MKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAAR 375

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +  EA+ +F  +++     +VV+Y +++  YG+S + +KA  + + ++   ++PN ++Y
Sbjct: 376 GMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSY 435

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH--EL 360
           + +I  +G  G L+ A  + +++    +  + V   T++ A  R G       +L   E+
Sbjct: 436 NALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEM 495

Query: 361 R--QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           R  + NT+   +AI      G  ++A  ++          D   +  +I    +  K+  
Sbjct: 496 RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGE 555

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGK----LREFETADDLYSEMQEEGCVFSDQVHF 474
            +   E+M          + + ++ +Y K    L +   A+  ++ M+  GC      + 
Sbjct: 556 ALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYT 615

Query: 475 QMLSLYGARKDFNMLESLFERLDSD 499
            ML  Y A + +  L +LFE ++ +
Sbjct: 616 AMLDAYNAAEKWEKLYALFEEMEEN 640



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 169/366 (46%), Gaps = 39/366 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y  +L    R+++ + A  +F  +++  + P+  +Y+ LI  +G  G+ + AI
Sbjct: 393 FRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAI 452

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++MEQD++  ++V    L+    +     K  ++ S  +  GI  + VAYN+ I  +
Sbjct: 453 EILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSY 512

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                + +A  L   MR++ +K D+V+Y+ L++   +  KF EALS   EM  +  P+  
Sbjct: 513 INVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSK 572

Query: 195 TTCNIMIDVYGQ----LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + +I  Y +    L    +A+  F  M+ +G  P VV+Y  +L  Y  AE + +   
Sbjct: 573 EVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYA 632

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------- 295
           LF  M+  +++ + +    +++ + K  +  +  +L Q M+ + I               
Sbjct: 633 LFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACG 692

Query: 296 ---------------EPNAITYST-----IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                          EP+    S+      +   GK+GK++    LF K+ +SG E++  
Sbjct: 693 LLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFN 752

Query: 336 LYQTMI 341
            Y  ++
Sbjct: 753 TYSILL 758



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 20/216 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y  +L     A++WE  + LF+EM +  +  D    + L+  F K G     +S
Sbjct: 608 SPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLS 667

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q M +  +     ++  ++     L D+  A+ +   ++ S  V      N  +N  G
Sbjct: 668 LAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLG 727

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENH--KFVEALSVFAEMNEVNCPL 192
           K+   +    L  +M   G + +  +YS LL NL    +  K++E  SV A M       
Sbjct: 728 KSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEDNSVAAVM------- 780

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
               C ++        +A DA  L W M   GI PS
Sbjct: 781 ----CFLL-----SKQLAMDARVLQW-MEDAGIHPS 806


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 225/458 (49%), Gaps = 8/458 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L  + +  + +L+   F +M   GI    +TY+ +I    KEG  + A
Sbjct: 215 RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMA 274

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S   QM++   + D+V Y++LI+   KL    + I IF ++K +   PD++ YN +IN 
Sbjct: 275 RSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 334

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K +   +A   + EM+  G+KP+ V+YST ++ + +     EA+  F +M  V    +
Sbjct: 335 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   +     +A +L   + + GI  +VV+Y  LL    E     EA  +FR
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA- 312
            M    +  N  TY  ++  + K+ E E A ++++EM+ + I+P+ + Y TI  +WG   
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI--LWGLCN 512

Query: 313 -GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +L+ A +L  +++ SG+  + V+Y T++ AY + G    A  LL E+     I  E  
Sbjct: 513 ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVT 572

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L ++G ++EA   F +  + G   +++V+  +++   +N  +    ++F++M 
Sbjct: 573 YCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEML 632

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  PD      +++   K    + A +L   M E G
Sbjct: 633 DKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 223/487 (45%), Gaps = 39/487 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SVF YN+++  + +    E+A  LF +M++ G  PD  TY++LI   GK G+ D  I   
Sbjct: 254 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF 313

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +QM+      D++ Y+ LI    K     KA      +K++G+ P++V Y+T I+ F K 
Sbjct: 314 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 373

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            + +EA     +MR   + P+  +Y++L++   +     EAL +  E+ +    L++ T 
Sbjct: 374 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 433

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             ++D   +    K+A+ +F +M   G+ P+  +Y  L+  + +A+    A  + + M+ 
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K I+ +++ Y T++         E+A  L+ E++  GI  NA+ Y+T++  + K+G+   
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA------------------------ 353
           A  L +++   G+    V Y  +I    + GLV  A                        
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 354 -----------KRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
                      K+L  E+     +P + A T L     + G ++EA  +  +  + G   
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +I   S + +      + ++M   G  PD  +   ++  Y  L + + A +L 
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 459 SEMQEEG 465
           +EM + G
Sbjct: 734 NEMAKRG 740



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 182/413 (44%), Gaps = 39/413 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P V  YN ++    + ++   A     EM+  G+ P+  TYST I  F KEGM 
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS-------------------- 110
             AI +   M +  ++ +   Y++LI+   K  + ++A+                     
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436

Query: 111 ---------------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                          +F  + ++G+ P+   Y  +++ F KAK  + A+ +++EM+E+ +
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           KPD + Y T+L       +  EA  +  E+ E     +      ++D Y +   A +A  
Sbjct: 497 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 556

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M  +G+  + V+Y  L+    ++ L  EA+H F  M    ++ NV  Y  ++    
Sbjct: 557 LLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLC 616

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+   E A  L  EM ++G+ P+ I Y+ +I    K G L  A  L  ++   G+E+D  
Sbjct: 617 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 676

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEA 384
            Y  +I      G V  A+ LL E+     +P E     L +     G+++EA
Sbjct: 677 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 729



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 4/353 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+ F Y  ++    +A     A  L +E+ Q GI  +  TY+ L+    +EG    A  
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M    V+ +   Y+ L+    K  +   A  I   +K   I PDL+ Y T++    
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 511

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                +EA+LLI E++E G+  + V Y+TL++ Y ++ +  EAL++  EM ++       
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +ID   +  + ++A   F  M ++G+ P+V  Y  L+    +   F  A  LF  M
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG--KAG 313
             K +  + + Y  +I    K    ++A NL   M   G+E +   Y+ +  IWG   +G
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTAL--IWGLSHSG 689

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           ++ +A  L  ++   GV  D V+Y  +I  Y  +G V  A  L +E+ +   I
Sbjct: 690 QVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 149/343 (43%), Gaps = 50/343 (14%)

Query: 3   VAILDWINEEARY---------------SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ 47
            A+LD + EE R                +P+   Y  ++   ++AK+ E A  +  EM++
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           + I PD   Y T++     E   + A   + ++++  ++ + V+Y+ L++   K    ++
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+++   +   G++   V Y  +I+   K+ L +EA      M E G++P+   Y+ L++
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +N+ F           EV                        A +LF  M   G+ P
Sbjct: 614 GLCKNNCF-----------EV------------------------AKKLFDEMLDKGMMP 638

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             ++Y  L+    +     EA++L   M    +E ++  Y  +I     S + +KA NL+
Sbjct: 639 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 698

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
            EM  +G+ P+ + Y  +I  +   GK+D A  L  ++   G+
Sbjct: 699 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 212/407 (52%), Gaps = 4/407 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L D M  +G  PD  TY  ++    K G  D A + L +MEQ ++   +++Y+ +I+   
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K      A+++F  +++ GI P++V Y+++I+       + +A  L+ +M E+ + PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           ++S L++ +V+  K VEA  ++ EM + +    + T + +I+ +   D   +A ++F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                 P VV+YNTL++ + + +   E + +FR M ++ +  N VTYN +I+   ++ + 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  + +EM + G+ PN +TY+T++    K GKL++A ++F+ L+ S +E     Y  M
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    + G V     L   L     +P+ +   T I+   R G  EEA  +F++  + G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           + +   +  +I    R+       E+ ++MRS G+  D+  I LV N
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 193/380 (50%), Gaps = 9/380 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ +  P V  YN ++  + + K  + A  LF EM  +GI P+  TYS+LI+C    G +
Sbjct: 43  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 102

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L  M + +++ D+  +S LI+   K     +A  ++  +    I P +V Y+++
Sbjct: 103 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 162

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F       EA+ + E M  +   PD V+Y+TL+  + +  +  E + VF EM++   
Sbjct: 163 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             +  T NI+I      G  DMA++   +F  M   G+ P++++YNTLL    +     +
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 279

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  +QR ++E  + TYN MI+   K+ + E   +L   +  +G++P+ + Y+T+I+
Sbjct: 280 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 339

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + + G  + A  LF++++  G   +   Y T+I A  R G    +  L+ E+R      
Sbjct: 340 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 399

Query: 368 RETAI---TILARAGRIEEA 384
             + I   T +   GR++++
Sbjct: 400 DASTIGLVTNMLHDGRLDKS 419



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 11/386 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           LI+ M  +G +PD V+Y  ++N   +      A ++  +M +      +   N +ID   
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     DA  LF  M   GI P+VV+Y++L+        + +A  L   M  ++I  +V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++ +I  + K  +  +A  L  EM  R I+P+ +TYS++I  +    +LD A  +F+ +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
            S     D V Y T+I  + +   V     +  E+ Q     NT+     I  L +AG  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           + A  +F++    G   +I  +  +++   +N K    + VFE ++ +   P  +   ++
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDS 500
           +    K  + E   DL+  +  +G V  D V +  M+S +  +      ++LF+ +  D 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 501 NINKKELHHVVAGIYERANRLNDASR 526
            +     ++ +     RA RL D  R
Sbjct: 362 TLPNSGCYNTLI----RA-RLRDGDR 382



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + +++ + ++  P+++ YN+++  + +A + E    LF  +  +G+ PD   Y+T+
Sbjct: 279 KAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 337

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ F ++G  + A +  ++M++D    +   Y+ LI    +  D   +  +   ++S G 
Sbjct: 338 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 397

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
             D      + N+    +L K
Sbjct: 398 AGDASTIGLVTNMLHDGRLDK 418


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 213/402 (52%), Gaps = 5/402 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  P+  TY  ++
Sbjct: 174 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A + L +ME  ++  ++V+YS +I+   K      A+++F+ +++ G+ 
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y+++I+     + + +A  L+ +M E+ + P+ V+++ L++ +V+  K VEA  +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +   D+ T + +I+ +   D   +A  +F  M      P+VV+YNTL+  + +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+T++    K GKL++A ++F+ L+ S +E     Y  MI    + G V     L   L 
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
               +P+ I   T I+   R G  EEA  +FR+  + G + D
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 213/425 (50%), Gaps = 4/425 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS+   + +L      K+   A  L D+M + G  PD  T++TLI           A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + + +M Q     +LV Y  ++    K  D   A ++ ++++++ I  ++V Y+T+I+  
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   +A  L  EM  +GV+P+ ++YS+L++      ++ +A  + ++M E     ++
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID + +     +A++L+  M K  IDP + +Y++L+  +   +   EA H+F L
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K+   NVVTYNT+I  + K+   ++   L +EM  RG+  N +TY+T+I  + +A  
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            D A M+F+++ S GV  + + Y T++    + G +  A  +   L+    +P       
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  + +AG++E+   +F      G   D+ ++  MI  F R         +F KMR  G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570

Query: 431 YFPDS 435
             PDS
Sbjct: 571 PLPDS 575



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 240/525 (45%), Gaps = 39/525 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S     Y  +LRN L + + + A GLF  M +    P  + ++ L++   K   FD  I
Sbjct: 46  FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S  ++M++  +S +L  Y+ LI    + S  S A+++  ++   G  P +V  ++++N +
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              K   +A  L+++M E G +PDT++++TL++    ++K  EA+++   M +  C  +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 195 TTCNIMIDVY---GQLDMA--------------------------------KDADRLFWS 219
            T  ++++     G +D+A                                 DA  LF  
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G+ P+V++Y++L+      E + +A  L   M  ++I  NVVT+N +I  + K  +
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A  L  EM  R I+P+  TYS++I  +    +LD A  +F+ + S     + V Y T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I  + +   +     L  E+ Q     NT+   T I    +A   + A  VF+Q    G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              +I  +  +++   +N K    + VFE ++ +   P  +   +++    K  + E   
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           DL+  +  +G      ++  M+S +  +      ++LF ++  D 
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 228/492 (46%), Gaps = 40/492 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V +Y +V+  +    +   A  LF+EM Q+G+ P+  TY++++    K    D A  
Sbjct: 269 SPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAEL 328

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+QM  + +  D V Y+ +I     L  + +A  +F  +   G++PD+V +N++++   
Sbjct: 329 VLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLC 388

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K  KEA  +   +  +G KPD +SYS LL+ Y    +FV+  ++F  M +     D  
Sbjct: 389 KHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I+ + +  M  +A  +F  MR  G+ P+VV+Y T++          +A+     M
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE------------------- 296
               ++ N V Y+++I+ +    +  KA  L+ EM ++GI                    
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568

Query: 297 -----------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                            P+  T++++I  +   GK+D+A  +   + S+G E D V Y T
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYST 628

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I  Y + G +     L  E+     +P T+     +  L RAGR   A  +F +  ++G
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               IS +  +++   RN      I +F K+ +     +  I+  ++++  K++  E A 
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAH 748

Query: 456 DLYSEMQEEGCV 467
           DL++ +   G V
Sbjct: 749 DLFASVSASGLV 760



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 7/446 (1%)

Query: 23  NVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           N  L+ +  AK+ + A   L   M + G  PD ++Y+T+I           A+  L +M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 82  Q-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           + D  S D+V Y+ +I       + SKA ++F+ +   G+VP++V YN++++   KA+  
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A L++ +M +  ++PD V+Y+ +++ Y    ++ EA  +F EM       D+ T N +
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           +D   +   +K+A  +F S+   G  P ++SY+ LL  Y     F +  +LF  M    I
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +   +N +I  + K    ++A  +  EM+ +G+ PN +TY+T+IA   + G+L  A  
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRETAITIL 375
              ++ S G++ + V+Y ++I  +   G +  AK L+ E+      +PN     + I  L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              GR+  A  VF      G+  DI  F  +I+ +    K      V + M SAG  PD 
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 436 HIIALVLNSYGKLREFETADDLYSEM 461
              + ++N Y K    +    L+ EM
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREM 649



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 5/379 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P + +Y+++L       ++   + LF  M   GI  D + ++ LI    K GM D A+
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    VS ++V Y+ +I    ++   + A+   S++ S G+ P+ V Y+++I  F
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF 527

Query: 135 GKAKLFKEARLLIEEMREQGV-KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                  +A+ L+ EM +QG+ +P+   +S++++      + + A  VF  +  +    D
Sbjct: 528 CTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPD 587

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +ID Y  +     A  +  +M   G +P VV+Y+TL+  Y ++    + + LFR
Sbjct: 588 IFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFR 647

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K ++   VTY+ ++    ++     A  +  EM   G   +  TY+ I+    +  
Sbjct: 648 EMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNN 707

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-- 371
             D A  LF KL +  ++ +  +  TMI A  +V     A  L   +     +P  +   
Sbjct: 708 CTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYG 767

Query: 372 --ITILARAGRIEEATWVF 388
             I  L + G +EEA  +F
Sbjct: 768 VMIINLLKEGSVEEADIMF 786



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 178/426 (41%), Gaps = 46/426 (10%)

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNL 168
           + F+RL  +G+  D +  NT +     AK   EA  +L+  M E G  PD  SY+T++  
Sbjct: 186 AFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKS 245

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
                +  EAL +   M + +                                  G  P 
Sbjct: 246 LCGGSRSQEALDMLLRMTKGD----------------------------------GCSPD 271

Query: 229 VVSYNTLLR-VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           VVSY  ++  ++ E E+  +A +LF  M +K +  NVVTYN+++    K+   +KA  ++
Sbjct: 272 VVSYTMVIHGLFMEGEI-SKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVL 330

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           ++M +  I+P+ +TY+ +I  +   G+   AA +F+++   G+  D V + +++ +  + 
Sbjct: 331 RQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVF 403
                A  + H +      P   + +IL    A  GR  +   +F    D G V D   F
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I   ++       + +F +MR  G  P+    A V+ +  ++     A +  S+M  
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
            G   +  V+  ++  +    D    + L   +  D  I +  +    + I+   N    
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM-MDQGIPRPNITFFSSIIHSLCNE--- 566

Query: 524 ASRIMN 529
             R+MN
Sbjct: 567 -GRVMN 571



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 36/319 (11%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH-LFRLMQRKEIEQNVVTYNTMIKIY 274
           L   M ++G  P   SYNT+++         EA+  L R+ +      +VV+Y TM+ I+
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY-TMV-IH 280

Query: 275 GKSLEHE--KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           G  +E E  KA NL  EM  +G+ PN +TY++I+    KA  +D+A ++ +++  + ++ 
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           D V Y  MI  Y  +G                               R +EA  +F++  
Sbjct: 341 DEVTYTAMIHGYSCLG-------------------------------RWKEAAKMFKEMT 369

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G + DI  F  +++   ++K+     E+F  + + G+ PD    +++L+ Y     F 
Sbjct: 370 REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFV 429

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
             ++L+  M + G V        +++ +  R   +    +F  +           +  V 
Sbjct: 430 DMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVI 489

Query: 513 GIYERANRLNDASRIMNRM 531
               R  RL DA   +++M
Sbjct: 490 AALCRMGRLADAMEKLSQM 508



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 1/333 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDSAIS 75
           P+   Y+ +++          A  L  EM  +GI  P+   +S++I     EG   +A  
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               +       D+  +++LI+    +    KA  +   + S+G  PD+V Y+T+IN + 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+    +  +L  EM  + VKP TV+YS +L+      +   A  +F EM E    + ++
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I++    + +   +A  LF  +  M +   +   NT++    + +   EA  LF  +
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N  TY  MI    K    E+A  +   M+  G  P++   + II +  + G++
Sbjct: 755 SASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEI 814

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            +A     K+  + + ++      +I  +   G
Sbjct: 815 VKAGYYMSKVDGTIISLEASTTSLLISLFASKG 847



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 92/193 (47%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+   Y++VL  + RA +   A  +F EM + G A    TY+ ++    +    D A
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA 712

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I+   ++    +  ++ + + +I    K+    +A  +F+ + +SG+VP+   Y  MI  
Sbjct: 713 ITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIIN 772

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    +EA ++   M + G  P +   + ++ + ++  + V+A    ++++     L+
Sbjct: 773 LLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLE 832

Query: 194 LTTCNIMIDVYGQ 206
            +T +++I ++  
Sbjct: 833 ASTTSLLISLFAS 845


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 223/459 (48%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   SPS+  YNVV+  + RA + + A  L   M ++G+  D +TYS LI  FGK+   
Sbjct: 263 EEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRC 322

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++M    +    V Y+ LI+   +  D  +A  +   + + G+  +L  YN +
Sbjct: 323 TEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNAL 382

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    K    ++A  L+ EM   G+KPDT +Y+ ++  Y++         + +EM + N 
Sbjct: 383 VKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                TC ++I+   +    +DA R+F  M  +G+ P+ V Y TL++ + +   F EA+ 
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVR 502

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + ++M +K ++ +V+ YN++I    KS + E+A + + EM  RG++PN  TY  +I  + 
Sbjct: 503 ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYC 562

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTI 366
           K+G++  A   F+++   G+  + V+   +I  Y + G    A    + +L     P+  
Sbjct: 563 KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVR 622

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L R G+++ A  +  +  + G V D+  +  +I  F +        ++ E M
Sbjct: 623 TYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM 682

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              G  P+      ++N   K  E E A +L+  +  +G
Sbjct: 683 CQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 218/484 (45%), Gaps = 5/484 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN ++   L+ +       L  EM++  + P  YT   +I    + G  + A   
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M    V  + V+Y+ LI+   +   + +A+ I   +   G+ PD++ YN++I    K
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           ++  +EA+  + EM E+G+KP+  +Y  L++ Y ++ +   A   F EM       +   
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVV 588

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           C  +ID Y +     +A  +F  M    + P V +Y+ L+           A+ L     
Sbjct: 589 CTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  +V TYN++I  + K     KA  L + M  +GI PN ITY+ +I    KAG+++
Sbjct: 649 EKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIE 708

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           RA  LF  +   G+  + V Y T+I  Y + G ++ A RL  E+      P++      I
Sbjct: 709 RARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               + G  E+A  +F ++   G     S    +++ F ++ K     ++ E M      
Sbjct: 769 DGCRKEGNTEKALSLFLESVQKG-FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PD     ++++ + K    + A+  + +MQ+   + +   +  +LS Y      + + +L
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887

Query: 493 FERL 496
           F+ +
Sbjct: 888 FDEM 891



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 231/517 (44%), Gaps = 10/517 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            +   N +L ++L+A + EL    ++ M +  +  D YTY+ LI    + G        L
Sbjct: 200 GLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLL 259

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +ME+   S  LV Y+ +I    +  +  +A  +   +   G+V D+  Y+ +I+ FGK 
Sbjct: 260 FEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQ 319

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K   EA+L++EEM  +G+KP  V+Y+ L++ ++      EA  V  EM      L+L T 
Sbjct: 320 KRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTY 379

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N ++    +    + AD L   M  +GI P   +YN ++  Y + +       L   M++
Sbjct: 380 NALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK 439

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             +     T   +I    +    E A+ + + M + G++PNA+ Y+T+I    + G+   
Sbjct: 440 SNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQE 499

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
           A  + + +   GV+ D + Y ++I+   +   +  AK  L E+     +PN       I 
Sbjct: 500 AVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIH 559

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              ++G ++ A   F++    G   +  V   +I+ + +         +F  M      P
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP 619

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY----GARKDFNML 489
           D    + +++   +  + + A +L SE  E+G V     +  ++S +    G  K F + 
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679

Query: 490 ESLFERLDSDSNINKKELHHVV--AGIYERANRLNDA 524
           E + ++  S + I    L + +  AG  ERA  L D 
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 205/491 (41%), Gaps = 38/491 (7%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E    P+V+ Y  ++    ++ + ++A   F EM   GIAP+    + LI  + KEG   
Sbjct: 544  ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A S  + M    V  D+  YS LI    +      A+ + S     G+VPD+  YN++I
Sbjct: 604  EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            + F K     +A  L E M ++G+ P+ ++Y+ L+N   +  +   A  +F  +      
Sbjct: 664  SGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLA 723

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL---RVYGEAE----L 244
             +  T   +ID Y +      A RLF  M   G+ P    Y+ L+   R  G  E    L
Sbjct: 724  HNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783

Query: 245  FGEAI---------------------------HLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            F E++                            L   M  K ++ + VTY  +I  + K+
Sbjct: 784  FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843

Query: 278  LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
               ++A     +MQ R + PNA+TY+ +++ +  AG+      LF ++ +  +E D V +
Sbjct: 844  GFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTW 903

Query: 338  QTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETA---ITILARAGRIEEATWVFRQAFD 393
              MI A+ + G      +L+ + L++   + +      I  L R   + E   V  +  +
Sbjct: 904  SVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEE 963

Query: 394  AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
             G    ++    ++  F +  K      V + M    + PDS  +  ++N      + E 
Sbjct: 964  QGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSEN 1023

Query: 454  ADDLYSEMQEE 464
            A D   +M  E
Sbjct: 1024 AGDFLKQMAWE 1034



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 196/447 (43%), Gaps = 16/447 (3%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA--ISIFSR 114
           +  LI  + K+G+FD A+S+    +++     L+  + L      LSD  KA  + +F R
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGL------LSDLLKANKLELFWR 222

Query: 115 ----LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
               +  + ++ D+  Y  +IN   +A   KE + L+ EM E+G  P  V+Y+ ++    
Sbjct: 223 FYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLC 282

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              +  EA  +   M++     D+ T +I+ID +G+     +A  +   M   G+ P  V
Sbjct: 283 RAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y  L+  +      GEA  +   M  + ++ N+ TYN ++K   K  + EKA  L+ EM
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
              GI+P+  TY+ +I  + K     R   L  +++ S +         +I    R G +
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 351 AHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A R+   +     +PN +   T I    + GR +EA  + +     G   D+  +  +
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I    +++K     +   +M   G  P+ +    +++ Y K  E + AD  + EM   G 
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLF 493
             +D V   ++  Y          S+F
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIF 609



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 171/385 (44%), Gaps = 14/385 (3%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           V++  LI+  +K   + +A+S F   K +G V  L+  N +++   KA   +        
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E  V  D  +Y+ L+N +       E   +  EM E  C   L T N++I   G L  
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVI---GGLCR 283

Query: 210 AKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           A + D  F     M K G+   V +Y+ L+  +G+ +   EA  +   M  K ++   V 
Sbjct: 284 AGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVA 343

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y  +I  + +  +  +A  + +EM  RG++ N  TY+ ++    K G +++A  L  ++ 
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI------LARAGR 380
             G++ D   Y  MI  Y +    +  K LL E+++ N +P  TA T       L R G 
Sbjct: 404 MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP--TAYTCGMIINGLCRHGS 461

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           IE+A+ VF      G   +  ++  +I+   +  ++   + + + M   G  PD      
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 441 VLNSYGKLREFETADDLYSEMQEEG 465
           V+    K R+ E A D   EM E G
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERG 546


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 233/491 (47%), Gaps = 44/491 (8%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + A  W+    L   M++ G+APDRYTY+TLI+C  +  ++  A  
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M+      D V +++L+++  K   + +AI +   ++  G  P +V YN++I+ + 
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------------- 166
           K  L ++A  L +EM  +G+KPD V+Y+TL+                             
Sbjct: 325 KDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384

Query: 167 --NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             N  ++ H    KF E ++VF E+       D+ T N ++ V+GQ  +  +   +F  M
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 444

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G  P   +Y +L+  Y    LF  A+ +++ M    I  +V TYN ++    +    
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L  EM+ R  +P+  +YS+++  +  A +LD+   L   + S  +E    L +T+
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564

Query: 341 IVAYERVGLVAHAKRLLHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++   +V  +A A++   ELRQ       N +     ++I  +   + +   +     ++
Sbjct: 565 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                 + +  ++ ++SR         +  +++S+G  PD +    V+ +YG+  + + A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682

Query: 455 DDLYSEMQEEG 465
             L+SEM+  G
Sbjct: 683 SRLFSEMKCSG 693



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 243/494 (49%), Gaps = 12/494 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V A    +R + RA +   A  L D        PD   Y+ L++ F + G F  A+
Sbjct: 139 HHPRVLA--TAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAGRFRDAV 192

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +  ++M    V   +V Y+ ++ +  K++  + + + + + +K  G+ PD   YNT+I+ 
Sbjct: 193 AVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISC 252

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +  L+KEA  + +EM+  G +PD V++++LL++Y +  +  EA+ V  EM  V CP  
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I  Y +  + + A  L   M   GI P VV+Y TL+     A     AI  + 
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYD 372

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R   + N+ TYN +IK++G   +  +   +  E+++ G  P+ +T++T++A++G+ G
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNG 432

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
                + +F++++ +G   +   Y ++I +Y R GL   A    KR++     P+     
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN 492

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             ++ LAR GR E+A  +F +  +     D   +  ++  ++  K+   +  + + + S 
Sbjct: 493 AVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSE 552

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
              P + ++  ++    K+     A+  + E++++ C     V   M+S+YG  +    +
Sbjct: 553 RIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV 612

Query: 490 ESLFERLDSDSNIN 503
           E +   L  +S IN
Sbjct: 613 EKILS-LMKESAIN 625



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 215/420 (51%), Gaps = 5/420 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-KFVEALS 180
           PD  AY  +++ F +A  F++A  +   M + GV+P  V+Y+ +L++Y +    + E + 
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           + A M E     D  T N +I    +  + K+A ++F  M+  G +P  V++N+LL VYG
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EAI + + M+R     +VVTYN++I  Y K    E+A  L QEM+ +GI+P+ +
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I+   +AGK+D A + + ++  +G + +   Y  +I  +   G       +  EL
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   AG + +   +  +I  +SR   +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              ++++++M  AG +PD      VL++  +   +E A+ L++EM+E  C   +  +  +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           L  Y   K  + +++L + + S+       L   +  +  + N L +A +    + ++R 
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 188/383 (49%), Gaps = 39/383 (10%)

Query: 17  PSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN +++ + +R K  E+   +FDE+R  G  PD  T++TL+  FG+ G+ DS +S
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMM-AVFDELRSAGFVPDIVTWNTLLAVFGQNGL-DSEVS 438

Query: 76  WL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + ++M++     +   Y +LI    +   +  A+ I+ R+  +GI PD+  YN +++  
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VENHK 174
            +   +++A  L  EM E+  KPD  SYS+LL+ Y                    +E H 
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558

Query: 175 FV---------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++               EA   F E+ +  C LD+   N M+ +YG+  M +  +++   
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M++  I+ S  +YN+L+ +Y       +  ++   ++   +  +  +YNT+I  YG+  +
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A+ L  EM+  G++P+ +TY+  +  +      + A  L + + + G + +   Y +
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738

Query: 340 MIVAYERVGLVAHAKRLLHELRQ 362
           ++  Y R G +  AK  +  L Q
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQ 761



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 36/207 (17%)

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           G+ G    A    ++L   GV   P +  T I    R G +A A  LL     P+     
Sbjct: 117 GQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYT 176

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS------------------ 411
             ++  +RAGR  +A  VFR+  D+G    I  +  ++ ++S                  
Sbjct: 177 ALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKE 236

Query: 412 ------------------RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                             R   Y    +VF++M+++G+ PD      +L+ YGK R  + 
Sbjct: 237 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDE 296

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           A ++  EM+  GC  S   +  ++S Y
Sbjct: 297 AIEVIQEMERVGCPPSVVTYNSLISSY 323


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 244/527 (46%), Gaps = 45/527 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S + F++N +L+ ++R K+   A  LF         PD  +Y+ +I+ F   G   +A+
Sbjct: 73  FSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAAL 132

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M                                   KS+G  PD   +  +I   
Sbjct: 133 ELLEEM-----------------------------------KSAGFAPDAFTHTPIITAM 157

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             A     A   ++ +R  G  P+ V+Y+ L+  +    K  EA+ +  EM E  CP +L
Sbjct: 158 ANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNL 214

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N+++D   +L M   A  +   M + G  P+V+++N+L+  + +     +A  L  +
Sbjct: 215 VTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 274

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  NVVTY+ +I    KS +  +A  +++EM+ RG+ P+A TYS +I    KA K
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           ++ A  + +++  SG   D V+Y ++I A+ + G +  A++ L E+R+    P+ +   T
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394

Query: 371 AITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            I  L + G+I EA  +  Q  ++G+V  D+  +  +I    ++       ++ ++M  A
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  PD      +++   K    E A+ L   M+  GC  +   +  ++S     +  +  
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514

Query: 490 ESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           E + E + ++    N    + +V G+   + R+ +A +++ RM   R
Sbjct: 515 ERVMEEMRNAGCPPNLVTYNTMVNGLC-VSGRIKEAQQLVQRMKDGR 560



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 210/427 (49%), Gaps = 8/427 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V +YN+V+     A     A  L +EM+  G APD +T++ +IT     G  D 
Sbjct: 106 ASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDG 165

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L+ M  D    ++V Y+ LI    +     +A+ +   ++  G  P+LV YN +++
Sbjct: 166 AMDHLRSMGCDP---NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K  +   A+ ++++M E G  P+ +++++L++ + +     +A  +   M       
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T + +ID   +     +A  +   M+  G+ P   +Y+ L+    +A+   EA  + 
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M       +VV Y+++I  + KS +  +A   +QEM+ +   P+ +TY+T+I    K 
Sbjct: 343 RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 402

Query: 313 GKLDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           GK+  A ++ ++++ SG V  D V Y T+I    +  ++  A++LL  + +    P+ + 
Sbjct: 403 GKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L + GR+EEA ++ +    AG   ++  +  +I    + +K      V E+MR
Sbjct: 463 YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 522

Query: 428 SAGYFPD 434
           +AG  P+
Sbjct: 523 NAGCPPN 529



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 230/468 (49%), Gaps = 12/468 (2%)

Query: 4   AILDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           A L+ + E   A ++P  F +  ++  +  A   +   G  D +R  G  P+  TY+ LI
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALI 186

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F +    + A+  L++M +     +LV Y+ L++   KLS    A  +  ++   G  
Sbjct: 187 AAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 246

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ +N++++ F K     +AR L+  M  +G++P+ V+YS L++   ++ KF+EA  V
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM       D  T + +I    + D  ++A+++   M   G  P VV Y++++  + +
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAI 300
           +    EA    + M+++    +VVTYNT+I    K  +  +A  ++++MQ  G + P+ +
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYST+I    K+  L  A  L  ++  +G   D V Y T+I    + G +  A+ LL  +
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           ++    PN +   T I+ L +A +++EA  V  +  +AG   ++  +  M+     + + 
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 417 ANVIEVFEKMRS--AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
               ++ ++M+   A   PD+     ++N+       + A+ L  +M+
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 165/315 (52%), Gaps = 3/315 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y+ ++  + +++++  A  + +EM+ RG+ PD +TYS LI    K    + A   
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M     + D+V+YS++I    K     +A      ++     PD+V YNT+I+   K
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EA++++E+M+E G V PD V+YST++N   ++   VEA  +   M +  C  D+ 
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +ID   +    ++A+ L   M++ G  P+VV+Y TL+    +A    EA  +   M
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE--PNAITYSTIIAIWGKAG 313
           +      N+VTYNTM+     S   ++A  L+Q M++   E  P+A TY TI+     + 
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 581

Query: 314 KLDRAAMLFQKLRSS 328
            +  A  L ++++S+
Sbjct: 582 LVQEAEQLLEQMKST 596



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 195/441 (44%), Gaps = 14/441 (3%)

Query: 102 LSDYSKAISIFSRLKSS--GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           L D   A++ F    +S  G      ++N+++ V  + K  +EA  L         +PD 
Sbjct: 53  LKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDV 112

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            SY+ +++ +        AL +  EM       D  T   +I        A D D     
Sbjct: 113 CSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMAN---AGDLDGAMDH 169

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +R MG DP+VV+Y  L+  +  A+   EA+ L   M+ +    N+VTYN ++    K   
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
              A +++++M   G  PN +T+++++  + K G +D A  L   + + G+  + V Y  
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I    +      AK +L E++     P+       I  L +A +IEEA  + R+   +G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D+ V+  +I  F ++ K     +  ++MR     PD      V++   KL +   A 
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERL-DSDSNINKKELHHVVA 512
            +  +MQE G V  D V +  + + G  K   ++E+  L +R+  +  N +      ++ 
Sbjct: 410 VILEQMQESGDVLPDVVTYSTV-INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468

Query: 513 GIYERANRLNDASRIMNRMNK 533
           G+  +  RL +A  ++  M +
Sbjct: 469 GLC-KCGRLEEAEYLLQGMKR 488



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 156/349 (44%), Gaps = 13/349 (3%)

Query: 195 TTCNIMIDVYGQLDMAKDADRLF-WSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           TT  I+  V   L  AK A   F W+   + G   +  S+N+LL+V    +   EA  LF
Sbjct: 41  TTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLF 100

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R       E +V +YN +I  +  + +   A  L++EM++ G  P+A T++ II     A
Sbjct: 101 RSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA 160

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           G LD A      LRS G + + V Y  +I A+ R   +  A +LL E+R+    PN +  
Sbjct: 161 GDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY 217

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              +  L +   +  A  V ++  + G   ++  F  +++ F +     +  ++   M +
Sbjct: 218 NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA 277

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK--DF 486
            G  P+    + +++   K ++F  A ++  EM+  G V  D   +  L ++G  K    
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG-VTPDAFTYSAL-IHGLCKADKI 335

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
              E +  R+          ++  +   + ++ +L +A + +  M K+R
Sbjct: 336 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 229/483 (47%), Gaps = 42/483 (8%)

Query: 1   RSVAILDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S    D  N+   +  SP+V A+  ++  ++ + ++E A  ++ ++ Q+G   DR+ Y+
Sbjct: 45  KSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYN 104

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
            LI  FG+ G  DSA+                                    +F  +K  
Sbjct: 105 VLIRYFGRSGQLDSAME-----------------------------------MFREMKIK 129

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  PD   Y  ++N  GKA   +EAR   + M E+G+ P+  +Y+ L++ + +  +   A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +FAEM        + T NI++D          A +LF  M   G  P   +Y+TL+  
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            G++    EA  +FR M  + +  ++V YN+++    K+   ++   LM+EM  +G  P+
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           A +++TI+   GKA K D A  +F ++  SG + D + Y  +I +Y R G  A A+++L 
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+ +   IP      + I  LA  G+++EA  V  +   AG   D+  +  ++++  +  
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           +      +F++M+  G  PD+   A+ ++        + A  L+ +M+  GC   D+  +
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV-DKAMY 488

Query: 475 QML 477
           ++L
Sbjct: 489 RIL 491



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 3/358 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  YN+++    +  Q ++A GLF EM++RG  P   TY+ L+      G   +A  
Sbjct: 167 TPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARK 226

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M  D  S D   YS L+    K     +A  +F  +   G+  DLV YN+++    
Sbjct: 227 LFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA 286

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA        L++EM  +G  PD  S++T+++   + +K   A  VFA M E  C  DL 
Sbjct: 287 KAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLI 346

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + NI+ID Y +   A  A ++   M + G  P   +YN+L+          EA  +   M
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +      +VVTYN ++ + GK  E+++A  L Q+M+++G+EP+ ++Y+  I       +L
Sbjct: 407 ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRL 466

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           D A +LF+ +++ G  +D  +Y+ +I A  R G      +L HE      +P E+ +T
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE---SQFMPVESRLT 521



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/408 (21%), Positives = 199/408 (48%), Gaps = 5/408 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A  +F++ +S    P + A+  +I++   +  F+ A L+ +++ ++G + D  +Y+ L+ 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +  + +   A+ +F EM       D  T   +++  G+    ++A   F +M + G+ P
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           ++ +YN L+  + +      A+ LF  M+R+  + +VVTYN ++     +     A  L 
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            +M   G  P++ TYST++   GK+G+++ A  +F+++   GV +D V Y +++    + 
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G +    +L+ E+ +    P+     T +  L +A + + A  VF +  ++G   D+  +
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+ ++R    A   ++ E+M  AG+ P++     +++      + + A  +  EM+ 
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMET 408

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
            GC      + +++ + G R +      LF+++  D  +    L + V
Sbjct: 409 AGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM-KDKGVEPDTLSYAV 455



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 39/326 (11%)

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           ++  EM     PL   T   +I  YG+ + + DA  LF         P+V ++  L+ + 
Sbjct: 16  TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             +  F  A  +++ + +K  + +   YN +I+ +G+S + + A  + +EM+ +G EP+ 
Sbjct: 76  VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135

Query: 300 ITYSTIIAIWGKAGK-----------------------------------LDRAAMLFQK 324
            TY  ++   GKAG+                                   LD A  LF +
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGR 380
           ++  G +   V Y  ++ A    G V  A++L H++      P++    T +  L ++GR
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           +EEA  VFR+  D G   D+  +  ++   ++      V ++ ++M   G+ PD+     
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315

Query: 441 VLNSYGKLREFETADDLYSEMQEEGC 466
           ++++ GK  + + A ++++ M E GC
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGC 341



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 42/94 (44%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A   P V  YN ++  + +  + + A  LF +M+ +G+ PD  +Y+  I     +   
Sbjct: 407 ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRL 466

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           D A+   + M+      D  +Y  LI  A +  D
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500


>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 617

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 172/317 (54%), Gaps = 16/317 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  +R    + A  + DEM Q G+APD  TYS L+  + + G ++SA   
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   +++SG+ PD   YN MI+ FGK
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A     +MRE+G++PD V+++TL++ + +  +   A  +F EM E NCP   TT
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +  +  + +   M++ G+ P++++Y TL+ VYG +  + EAI     M+
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +                RG+ P+ ITY+T++    +  + D
Sbjct: 537 ADGLKPSPTMYHALVNAYAQ----------------RGLRPDVITYTTLMKALIRVEQFD 580

Query: 317 RAAMLFQKLRSSGVEID 333
           +  ++++++ +SG   D
Sbjct: 581 KVPVIYEEMITSGCAPD 597



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 182/389 (46%), Gaps = 13/389 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 221 ESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVA 280

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   +++    A  +   +   G+ PD   Y+ +
Sbjct: 281 EAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLL 340

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM     
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      A  
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+    E    ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++G+   A    + +++ G++  P +Y  ++ AY + GL            +P+ I   T
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL------------RPDVITYTT 568

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKD 399
            +  L R  + ++   ++ +   +G   D
Sbjct: 569 LMKALIRVEQFDKVPVIYEEMITSGCAPD 597



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 189/438 (43%), Gaps = 30/438 (6%)

Query: 41  LFDEMRQRGIAPDRYTYSTLI-TCFGKEGMFDSAI--SWLQQMEQDRVSGDLVLYSNLIE 97
           L   +R+    PD  +YS L+ +        D+A+    L  + + R+  D  L+S+LI 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VK 156
              + +    A+ + +  ++ G+ P   A   +I+  G A    EA  L  E    G +K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P T +Y+ LL  YV       A  V  EM++     D  T ++++D Y +    + A  L
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M   G+ PS   ++ +L  + +   + +A  + R MQ   +  +   YN MI  +GK
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                 A +   +M+  GIEP+ +T++T+I    K G+ DRAA LF+++R S        
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 337 YQTMIVAYERVGLVAH---AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
           Y  MI     +G   H    + +L E+++    PN I   T + +  R+GR +EA     
Sbjct: 477 YNIMI---NLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                G     +++  ++  +++                 G  PD      ++ +  ++ 
Sbjct: 534 AMKADGLKPSPTMYHALVNAYAQR----------------GLRPDVITYTTLMKALIRVE 577

Query: 450 EFETADDLYSEMQEEGCV 467
           +F+    +Y EM   GC 
Sbjct: 578 QFDKVPVIYEEMITSGCA 595



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/411 (19%), Positives = 172/411 (41%), Gaps = 35/411 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + S L+    +PDL +Y+ ++      +   +A LL   + ++RE  ++PD   +S L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y        A  +   M +  +  +  TY+ ++  Y ++   E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++++SGV  D   Y  MI  +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA    +++R+    P                               D+  + 
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEP-------------------------------DVVTWN 443

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++    E+FE+MR +   P +    +++N  G+   +E  + + SEM+E+
Sbjct: 444 TLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQ 503

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           G V +   +  ++ +YG    +       E + +D       ++H +   Y
Sbjct: 504 GLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 155/383 (40%), Gaps = 35/383 (9%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL---SVFAEMNEVNCPLDLTTCNIMID 202
           L+  +RE    PD  SYS LL   +      +A     +  ++ E     D    + +I 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIE 261
            + +  +   A  L  S + +G+ P   +   L+   G A    EA  LF       EI+
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                YN ++K Y +    + A  ++ EM   G+ P+  TYS ++  + +AG+ + A +L
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            +++ + GV+    ++  ++  +                                  G  
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRD-------------------------------RGDW 385

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           ++A  V R+   +G   D   +  MI+ F +     + ++ F KMR  G  PD      +
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           ++++ K    + A +L+ EM+E  C      +  M++L G ++ +  +E++   +     
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGL 505

Query: 502 INKKELHHVVAGIYERANRLNDA 524
           +     +  +  +Y R+ R  +A
Sbjct: 506 VPNIITYTTLVDVYGRSGRYKEA 528



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML---FQKLRSSGVEIDPVLYQTMIV 342
           L+  ++     P+  +YS ++A          AA+L      LR S +E D  L+  +I 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      AGR+ EA  +F + F AGE+K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + R     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R D+    ++   + +      +  ++V+   + +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    N+M +
Sbjct: 417 YNCLGHAMDAFNKMRE 432


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 224/446 (50%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  P+  TY  ++
Sbjct: 99  AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A + L +ME  ++  D+V+++ +I+   K      A+++F  +++ GI 
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + P+ V+++ L++ +V+  KFVEA  +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             +M + +   D+ T N +I+ +   D    A ++F  M      P + +YNTL++ + +
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           ++   +   LFR M  + +  + VTY T+I+      + + A  + ++M + G+ P+ +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++      GKL++A  +F  ++ S +++D  +Y TMI    + G V     L   L 
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   T I+ L     ++EA  + ++  + G + D   +  +I    R+   A
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+  +MRS  +  D+  I LV N
Sbjct: 518 ASAELIREMRSCRFVGDASTIGLVAN 543



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 4/458 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+F +N +L  + + K+++L   L ++M++ GI+ + YTY+ LI CF +     
Sbjct: 3   KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +      +V  S+L+         S A+++  ++   G  PD + + T+I
Sbjct: 63  LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  L++ M ++G +P+ V+Y  ++N   +      A ++  +M      
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+   N +ID   +     DA  LF  M   GI P+VV+Y++L+        + +A  L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K+I  N+VT+N +I  + K  +  +A  L  +M  R I+P+  TY+++I  +  
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +LD+A  +F+ + S     D   Y T+I  + +   V     L  E+       +T+ 
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L   G  + A  VF+Q    G   DI  +  +++    N K    +EVF+ M+
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +    D +I   ++    K  + +   DL+  +  +G
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y  +++ +      + A  +F +M   G+ PD  TYS L+      G  + A+     M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++  +  D+ +Y+ +IE   K         +F  L   G+ P++V YNTMI+     +L 
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  L+++M+E G  PD+ +Y+TL+  ++ +     +  +  EM       D +T  ++
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541

Query: 201 IDVY--GQLD 208
            ++   G+LD
Sbjct: 542 ANMLHDGRLD 551



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/141 (18%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + D++ +++     ++ Y  ++  + +A + +    LF  +  +G+ P+  TY+T+
Sbjct: 413 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+    + +   A + L++M++D    D   Y+ LI    +  D + +  +   ++S   
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D      + N+    +L K
Sbjct: 532 VGDASTIGLVANMLHDGRLDK 552


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 224/446 (50%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  P+  TY  ++
Sbjct: 98  AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 156

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A + L +ME  ++  D+V+++ +I+   K      A+++F  +++ GI 
Sbjct: 157 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 216

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V Y+++I+       + +A  L+ +M E+ + P+ V+++ L++ +V+  KFVEA  +
Sbjct: 217 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 276

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             +M + +   D+ T N +I+ +   D    A ++F  M      P + +YNTL++ + +
Sbjct: 277 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 336

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           ++   +   LFR M  + +  + VTY T+I+      + + A  + ++M + G+ P+ +T
Sbjct: 337 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 396

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS ++      GKL++A  +F  ++ S +++D  +Y TMI    + G V     L   L 
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 456

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   T I+ L     ++EA  + ++  + G + D   +  +I    R+   A
Sbjct: 457 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 516

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
              E+  +MRS  +  D+  I LV N
Sbjct: 517 ASAELIREMRSCRFVGDASTIGLVAN 542



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 200/462 (43%), Gaps = 45/462 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWEL--AHGLFDEMRQRGIAPDRYTYSTLIT--CFGKE 67
           ++R  PS+F +N +L  + + K+++L  +  L  +M + G  P   T S+L+   C GK 
Sbjct: 35  KSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGK- 93

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                           R+S  + L   ++E+                    G  PD + +
Sbjct: 94  ----------------RISDAVALVDQMVEM--------------------GYRPDTITF 117

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            T+I+         EA  L++ M ++G +P+ V+Y  ++N   +      A ++  +M  
Sbjct: 118 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 177

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D+   N +ID   +     DA  LF  M   GI P+VV+Y++L+        + +
Sbjct: 178 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 237

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L   M  K+I  N+VT+N +I  + K  +  +A  L  +M  R I+P+  TY+++I 
Sbjct: 238 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 297

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            +    +LD+A  +F+ + S     D   Y T+I  + +   V     L  E+       
Sbjct: 298 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 357

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +T+   T I  L   G  + A  VF+Q    G   DI  +  +++    N K    +EVF
Sbjct: 358 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 417

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + M+ +    D +I   ++    K  + +   DL+  +  +G
Sbjct: 418 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y  +++ +      + A  +F +M   G+ PD  TYS L+      G  + A+     M
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++  +  D+ +Y+ +IE   K         +F  L   G+ P++V YNTMI+     +L 
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  L+++M+E G  PD+ +Y+TL+  ++ +     +  +  EM       D +T  ++
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 540

Query: 201 IDVY--GQLD 208
            ++   G+LD
Sbjct: 541 ANMLHDGRLD 550



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/141 (18%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ + D++ +++     ++ Y  ++  + +A + +    LF  +  +G+ P+  TY+T+
Sbjct: 412 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 470

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+    + +   A + L++M++D    D   Y+ LI    +  D + +  +   ++S   
Sbjct: 471 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 530

Query: 121 VPDLVAYNTMINVFGKAKLFK 141
           V D      + N+    +L K
Sbjct: 531 VGDASTIGLVANMLHDGRLDK 551


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 215/450 (47%), Gaps = 7/450 (1%)

Query: 23  NVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           N +L+    AK+ + A   L     + G  PD ++YS L+     +G    A   L+ M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 82  QDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +     S D+V Y+ +I+   K  D +KA  +F  +   GI PD V Y+++++   KA+ 
Sbjct: 210 EGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A   + +M  +GV P+  +Y+ L+  Y    ++ EA+ VF EM   +   D+ T N+
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +    K+A  +F +M   G +P V SYN +L  Y       +   LF LM    
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I   + T+N +IK Y      +KA  +  EM++ G++PN +TY+T+IA   + GK+D A 
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITIL 375
             F ++   GV  D   Y  +I  +   G +  AK L+ E+       + +   + I  L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + GR+ +A  +F    + G      V+  +++ +    K    + VF+ M SAG  P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +   ++N Y K+   +    L+ EM ++G
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/565 (24%), Positives = 249/565 (44%), Gaps = 47/565 (8%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP V AYN V+    +      A  LF EM QRGI PD  TYS+++    K    D 
Sbjct: 213 AVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDK 272

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM    V  +   Y+NLI        + +A+ +F  ++   I+PD+V +N ++ 
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMG 332

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M       
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            + T N++I  Y    M   A  +F  MR  G+ P+V++Y T++          +A+  F
Sbjct: 393 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF 452

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR------------------- 293
             M  + +  +   Y+ +I+ +       KA  L+ E+ N                    
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKL 512

Query: 294 ----------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G+ P A+ YS ++  +   GK+++A  +F  + S+G+E + V+Y
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   +   +  ++    +N+ +   I +F+++R+     D   +  ++    + R  E 
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 692

Query: 454 ADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHH 509
           A DL++ +   G   CV +  +    L   G  ++    E +F  + ++    + + L+H
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEE---AEDMFSSMQNAGCEPDSRLLNH 749

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
           VV  + ++ N +  A   ++++++R
Sbjct: 750 VVRELLKK-NEIVRAGAYLSKIDER 773



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 133/295 (45%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  ++ ++ N+ +  +   A  +FD     G+ P    YS L+  +   G  + A+    
Sbjct: 499 IVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M    +  + V+Y  L+    K+    + +S+F  +   GI P  + YN +I+   +A 
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A++   EM E G+  +  +YS +L    +N  F EA+ +F E+  +N  +D+ T N
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 678

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            MI    Q    ++A  LF S+ + G+ P VV+Y+ ++    +  L  EA  +F  MQ  
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             E +    N +++   K  E  +A   + ++  R      +T   ++ ++   G
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 214/422 (50%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +  ++  + +  ++  A  LFD+M  +G  PD YTY+T+I    K G   +A   
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     ++V YS LI+   +    ++A+ IFS +K+ GI PD+  Y ++I    K
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  L+ EM    + PD V+++ L++ + +  K  EAL V   M E+    ++ T
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++  Y       +A +LF  M   G  P++ SYN L+  Y +A+   EA+ LF  M 
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  N V+YNT+I  + +  +  +A +L + M   G  P+  TYS ++  + K G L 
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+ ++S+ ++ + V+Y  ++ A  + G    A++L  EL     QP+     T I
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G ++EA   FR     G   D   +  +I    ++K  +  + +  +MR  G+ 
Sbjct: 521 NGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580

Query: 433 PD 434
            D
Sbjct: 581 AD 582



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 227/454 (50%), Gaps = 4/454 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+++  ++ +    + ++ +L   +  ++ + G+ P   T++TLI    K G F  A+ 
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M       D+  Y+ +I    K+ + + A  +  +++ +G  P++V Y+T+I+   
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           + +L  EA  +   M+ +G+ PD  +Y++L+    +  ++ EA ++  EM  +N   D+ 
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N+++D + +     +A  +  +M +MG++P+VV+Y++L+  Y       EA  LF +M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K  + N+ +YN +I  Y K+   ++A  L  EM ++G+ PN ++Y+T+I  + + GKL
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  LF+ + ++G   D   Y  ++  + + G +  A RL   ++    +PN +     
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +  + ++G  ++A  +F + F  G    + ++  +I    +       +E F  M + G 
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGC 544

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD     +++    + ++   A  L  EM++ G
Sbjct: 545 PPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 168/331 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EEA   P++  Y+ ++ ++ R +    A  +F  M+ +GI+PD +TY++LI    K   +
Sbjct: 225 EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A + L +M    +  D+V ++ L++   K    S+A+ +   +   G+ P++V Y+++
Sbjct: 285 KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  +       EAR L   M  +G KP+  SY+ L+N Y +  +  EA+ +F EM     
Sbjct: 345 MYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  + N +I  + QL   ++A  LF +M   G  P + +Y+ LL  + +    G+A  
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LFR MQ   ++ N+V Y  ++    KS  H+ A  L  E+  +G++P+   Y+TII    
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           K G LD A   F+ + + G   D + Y  +I
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVII 555



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 83/182 (45%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+  +YN ++    +  +   A  LF  M   G  PD +TYS L+  F K+G    A  
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M+   +  +LV+Y+ L+    K  ++  A  +FS L   G+ P +  Y T+IN   
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  EA      M   G  PD +SY+ ++   +++     AL +  EM +     D+ 
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584

Query: 196 TC 197
            C
Sbjct: 585 PC 586


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 244/502 (48%), Gaps = 18/502 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  +  ++  + R  +   A  L D M + G+ P + TY T++    K G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236

Query: 72  SAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           SA+  L++ME+   +  ++V+YS +I+   K   +S A ++F+ ++  GI PDL  YN+M
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  +  + +A  L++EM E+ + PD V+Y+ L+N +V+  KF EA  ++ EM     
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + MID + + +    A+ +F+ M   G  P+++++NTL+  Y  A+   + + 
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M    +  +  TYNT+I  +    +   A +L+QEM + G+ P+ +T  T++    
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 311 KAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             GKL  A  +F+ ++ S           GVE D   Y  +I      G    A+ L  E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +      P+TI   + I  L +  R++EAT +F          ++  F  +I  + +  +
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + +E+F +M   G   ++     ++  + K+     A D++ EM   G V+ D +  +
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG-VYPDTITIR 655

Query: 476 -MLSLYGARKDFNMLESLFERL 496
            ML+   ++++     ++ E+L
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKL 677



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 223/451 (49%), Gaps = 32/451 (7%)

Query: 2   SVAILDWINEEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +V+ LD + +    S   P+V  Y+ ++ ++ +  +   A  LF EM+++GI PD +TY+
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           ++I  F   G +  A   LQ+M + ++S D+V Y+ LI    K   + +A  ++  +   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           GI+P+ + Y++MI+ F K      A  +   M  +G  P+ ++++TL++ Y    +  + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
           + +  EM E     D TT N +I  +   G L+ A D   L   M   G+ P +V+ +TL
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD---LLQEMISSGLCPDIVTCDTL 471

Query: 236 LRVYGEAELFGEAIHLFRLMQRKE-----------IEQNVVTYNTMIKIY---GKSLEHE 281
           L    +     +A+ +F++MQ+ +           +E +V TYN +I      GK LE E
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +   L +EM +RGI P+ ITYS++I    K  +LD A  +F  + S     + V + T+I
Sbjct: 532 E---LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G V     L  E+ +     N I   T I    + G I  A  +F++   +G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 398 KD-ISVFGCMIELFSRNKKYANVIEVFEKMR 427
            D I++   +  L+S+ ++    + + EK++
Sbjct: 649 PDTITIRNMLTGLWSK-EELKRAVAMLEKLQ 678



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 254/539 (47%), Gaps = 18/539 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R ++ +L   L+ +M ++ I  D Y+++ LI CF        
Sbjct: 73  SRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +  +  D+V ++ L+         S+A+++F ++  +   P++V + T++N
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  L++ M E G++P  ++Y T+++   +    V AL +  +M E++  +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHII 252

Query: 193 -DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M++ GI P + +YN+++  +  +  + +A  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  ++I  +VVTYN +I  + K  +  +A  L  EM  RGI PN ITYS++I  + K
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             +LD A  +F  + + G   + + + T+I  Y     +     LLHE+ +   +   T 
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L       G +  A  + ++   +G   DI     +++    N K  + +E+F+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 428 SA-----------GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            +           G  PD     ++++      +F  A++LY EM   G V     +  M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +     +   +    +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 610



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  V +  L+ + V   +    +S++ +M       D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + +  I+I  +        A   F  + K+G+ P VV++NTLL      +   EA++LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVT+ T++    +     +A  L+  M   G++P  ITY TI+    K G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233

Query: 314 KLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
               A  L +K+   S +  + V+Y  +I +  + G  + A+ L  E+++    P+    
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I     +GR  +A  + ++  +     D+  +  +I  F +  K+    E++++M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDF 486
            G  P++   + +++ + K    + A+ ++  M  +GC   + + F  L     GA++  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRID 412

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +E L E  ++    +    + ++ G Y   + LN A  ++  M
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGD-LNAALDLLQEM 456


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 263/561 (46%), Gaps = 48/561 (8%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVV     + +  W+    L D M++ GI  DRYTY+TLI+C  + G+   A  
Sbjct: 217 PALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQ 276

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M+      D V +++L+++  K   + +AI +  R++++G  P +V YN++I+ + 
Sbjct: 277 VFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYV 336

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L +EM  +G+KPD V+Y+TL++      K   AL+ ++EM    C  +L 
Sbjct: 337 KDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLC 396

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE-------------- 241
           T N +I ++G      +   +F  +R  G  P VV++NTLL V+G+              
Sbjct: 397 TYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEM 456

Query: 242 ---------------------AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                                  LF +A+ +++ M    I  ++ TYN ++    +    
Sbjct: 457 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRW 516

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L  EM +R  +P+ ++YS+++  +  A KLD+   L + + +  +E    L +T+
Sbjct: 517 EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTL 576

Query: 341 IVAYERVGLVAHAKRLLHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++   +V  +   ++   ELR+       N +     ++I  +   +++   V     + 
Sbjct: 577 VLVNNKVNNLPETEKAFQELRRRRCSLDINVL--NAMVSIYGKNKMVKKVEEVLSLMMEN 634

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                 + +  ++ ++SR         +  +++S+G  PD +    V+ +YG+  + + A
Sbjct: 635 SINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 694

Query: 455 DDLYSEMQEEGCVFSDQVHFQM-LSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVA 512
             L+SEM+  G V  D V + + +  Y A   F     L   L       N++  + ++ 
Sbjct: 695 SRLFSEMKCSG-VKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQ 753

Query: 513 GIYERANRLNDASRIMNRMNK 533
           G Y R  R+ +A   ++ + K
Sbjct: 754 G-YSRHGRMVEAKSFLSNLPK 773



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 239/521 (45%), Gaps = 40/521 (7%)

Query: 51  APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAI 109
           APD   Y+ L++ F + G F  A++  Q+M    V   LV Y+ +     K+S  + + +
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
           ++   +K  GI  D   YNT+I+   +  L +EA  + +EM+  G +PD V++++LL++Y
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY 300

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            +  K  EA+ V   M    C   + T N +I  Y +  + ++A  L   M   G+ P V
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y TL+           A+  +  M R     N+ TYN +IK++G   +  +   +  +
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           +++ G  P+ +T++T+++++G+ G     + +F++++ +G   +   Y ++I +Y R GL
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480

Query: 350 VAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A    KR++     P+       ++ LAR GR E+A  +F +  D     D   +  
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540

Query: 406 MIELFSRNKK-----------YANVIE------------------------VFEKMRSAG 430
           ++  ++  KK           YA  IE                         F+++R   
Sbjct: 541 LLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
              D +++  +++ YGK +  +  +++ S M E     S   +  ++ +Y    D    E
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCE 660

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           S+   + S      +  ++ V   Y R  ++ +ASR+ + M
Sbjct: 661 SILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 701



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 236/483 (48%), Gaps = 9/483 (1%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           +TL +  G  G+  + +   + +  DR     + +  ++  A ++   +  ++  S +  
Sbjct: 122 NTLASRGGHPGIAVAVVRAARDLHGDRA----LHHPRVLPTAIRVFARAGCLAEASAILE 177

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFV 176
           +   PD  AY  +++ F +A  F++A  + + M + GV+P  V+Y+ + + Y + +  + 
Sbjct: 178 AAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWK 237

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           E +++   M E     D  T N +I    +  + ++A ++F  M+  G +P  V++N+LL
Sbjct: 238 EVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLL 297

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
            VYG+A    EAI + + M+      +VVTYN++I  Y K    E+A  L QEM+ RG++
Sbjct: 298 DVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMK 357

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P+ +TY+T+I+   + GK+D A   + ++  +G   +   Y  +I  +   G       +
Sbjct: 358 PDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAV 417

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             +LR     P+ +   T +++  + G   E + VF++   AG + +   +  +I  +SR
Sbjct: 418 FDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 477

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
              +   +E++++M  AG +PD      VL++  +   +E A+ L++EM +  C   +  
Sbjct: 478 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELS 537

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +  +L  Y   K  + +++L E + ++       L   +  +  + N L +  +    + 
Sbjct: 538 YSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELR 597

Query: 533 KRR 535
           +RR
Sbjct: 598 RRR 600



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 212/444 (47%), Gaps = 39/444 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +PSV  YN ++   ++    E A  L  EM  RG+ PD  TY+TLI+   + G  
Sbjct: 317 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKI 376

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+A++   +M ++  S +L  Y+ LI+L      +++ +++F  L+S+G VPD+V +NT+
Sbjct: 377 DAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTL 436

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++VFG+  L  E   + +EM++ G  P+  +Y +L++ Y     F +A+ ++  M E   
Sbjct: 437 LSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 496

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
             D++T N ++    +    + A++LF  M      P  +SY++LL  Y  A        
Sbjct: 497 YPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKT 556

Query: 243 ---ELFGEAIH------------------------LFRLMQRKEIEQNVVTYNTMIKIYG 275
              +++ E I                          F+ ++R+    ++   N M+ IYG
Sbjct: 557 LSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYG 616

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+   +K   ++  M    I  +A TY++++ ++ + G  ++   +  +++SSG+  D  
Sbjct: 617 KNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRY 676

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG----RIEEATWVFRQA 391
            Y T+I AY R G +  A RL  E++     P      I  ++       EEA  + R  
Sbjct: 677 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYL 736

Query: 392 FDAGEVKDISVFGCMIELFSRNKK 415
              G   +   F  +++ +SR+ +
Sbjct: 737 VTQGCRPNERTFNSILQGYSRHGR 760



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 187/389 (48%), Gaps = 41/389 (10%)

Query: 16  SPSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           SP++  YN +++ + +R K  E+   +FD++R  G  PD  T++TL++ FG+ G+ DS +
Sbjct: 392 SPNLCTYNALIKLHGVRGKFTEMM-AVFDDLRSAGYVPDVVTWNTLLSVFGQNGL-DSEV 449

Query: 75  SWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           S + ++M++     +   Y +LI    +   + +A+ I+ R+  +GI PD+  YN +++ 
Sbjct: 450 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 509

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VENH 173
             +   +++A  L  EM ++  KPD +SYS+LL+ Y                    +E H
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERH 569

Query: 174 KFV---------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            ++               E    F E+    C LD+   N M+ +YG+  M K  + +  
Sbjct: 570 NWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLS 629

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M +  I+ S  +YN+L+ +Y       +   +   ++   +  +  +YNT+I  YG+  
Sbjct: 630 LMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKG 689

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++A+ L  EM+  G++P+ +TY+  I  +      + A  L + L + G   +   + 
Sbjct: 690 QMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFN 749

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           +++  Y R G +  AK  L  L  P   P
Sbjct: 750 SILQGYSRHGRMVEAKSFLSNL--PKIYP 776


>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 675

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 182/331 (54%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  + DEM   G+APD  TYS L+  + + G ++SA   
Sbjct: 304 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARIL 363

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   + +SG+ PD   YN MI+ FGK
Sbjct: 364 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGK 423

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A      MRE+G++PD V+++TL++ + +  +   A+ +F EM E NCP   TT
Sbjct: 424 YNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTT 483

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +     + +   M++ G+ P++++Y TL+ VYG +  F EAI    +M+
Sbjct: 484 YNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMK 543

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  ++++  +G+  ++ 
Sbjct: 544 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVV 603

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q ++ + +  D + Y T++ A  R+
Sbjct: 604 EAFSVLQFMKENDLRPDVITYTTLMKALIRI 634



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 205/428 (47%), Gaps = 5/428 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 228 ESRLEPDAPLFSDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVA 287

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   K+     A  +   +   G+ PD   Y+ +
Sbjct: 288 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLL 347

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM+    
Sbjct: 348 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGV 407

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A   F  MR+ GI+P VV++NTL+  + +      A+ 
Sbjct: 408 QPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAME 467

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+         TYN MI + G+         ++ EM+ +G+ PN ITY+T++ ++G
Sbjct: 468 LFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYG 527

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  +R    + +T+
Sbjct: 528 RSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 587

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + +       R+ EA  V +   +     D+  +  +++   R +++  V  ++E+M
Sbjct: 588 VLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEM 647

Query: 427 RSAGYFPD 434
            ++G  PD
Sbjct: 648 ITSGCAPD 655



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 192/427 (44%), Gaps = 8/427 (1%)

Query: 45  MRQRGIAPDRYTYSTLI-TCFGKEGMFDSAI--SWLQQMEQDRVSGDLVLYSNLIELARK 101
           +R+ G  PD  +YS L+ +        D+AI    L  + + R+  D  L+S+LI    +
Sbjct: 188 IREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFAR 247

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTV 160
            +    A+ + +  ++ G+ P   A   +I+  G A    EA  L  E    G +KP T 
Sbjct: 248 AALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTR 307

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+ LL  YV+      A  V  EM++     D  T ++++D Y +    + A  L   M
Sbjct: 308 AYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 367

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G+ PS   ++ +L  + +   + +A  + R M    ++ +   YN MI  +GK    
Sbjct: 368 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCL 427

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A +    M+  GIEP+ +T++T+I    K G+ DRA  LF+++R S        Y  M
Sbjct: 428 GHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIM 487

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I            + +L E+++    PN I   T + +  R+GR +EA          G 
Sbjct: 488 INLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGL 547

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
               +++  ++  +++     + + V + MR+ G    + ++  ++N++G+ R    A  
Sbjct: 548 KPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFS 607

Query: 457 LYSEMQE 463
           +   M+E
Sbjct: 608 VLQFMKE 614



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/427 (19%), Positives = 178/427 (41%), Gaps = 35/427 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + + ++  G +PDL +Y+ ++      +   +A +L   + ++RE  ++PD   +S L
Sbjct: 182 LRLLALIREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDL 241

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 242 ISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGE 301

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y +      A  +   M    +  +  TY+ ++  Y ++   E A 
Sbjct: 302 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESAR 361

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++ +SGV+ D   Y  MI  +
Sbjct: 362 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 421

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA    + +R+    P                               D+  + 
Sbjct: 422 GKYNCLGHAMDAFNRMREEGIEP-------------------------------DVVTWN 450

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++   +E+FE+MR +   P +    +++N  G+   +   + + SEM+E+
Sbjct: 451 TLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQ 510

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G V +   +  ++ +YG    F       E + +D       ++H +   Y +    + A
Sbjct: 511 GLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHA 570

Query: 525 SRIMNRM 531
             ++  M
Sbjct: 571 LNVVKAM 577



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 8/256 (3%)

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML---FQKLRSSGVEIDPVLYQTMIV 342
           L+  ++  G  P+  +YS ++A          AA+L      LR S +E D  L+  +I 
Sbjct: 184 LLALIREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLIS 243

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ R  L   A  LL   +     PR  A+T L      AGR+ EA  +F + F AGE+K
Sbjct: 244 AFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIK 303

Query: 399 D-ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                +  +++ + +     N  +V ++M   G  PD    +L++++Y +   +E+A  L
Sbjct: 304 PRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARIL 363

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
             EM+ +G   S  V  ++L+ +  R D+    ++   + +      +  ++V+   + +
Sbjct: 364 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGK 423

Query: 518 ANRLNDASRIMNRMNK 533
            N L  A    NRM +
Sbjct: 424 YNCLGHAMDAFNRMRE 439


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 232/491 (47%), Gaps = 44/491 (8%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + A  W+    L   M++ G+APDRYTY+TLI+C  +  ++  A  
Sbjct: 187 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 246

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M+      D V +++L+++  K   + +AI +   ++  G  P +V YN++I+ + 
Sbjct: 247 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 306

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------------- 166
           K  L ++A  L +EM  +G+KPD V+Y+TL+                             
Sbjct: 307 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 366

Query: 167 --NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             N  ++ H    KF E ++VF E        D+ T N ++ V+GQ  +  +   +F  M
Sbjct: 367 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 426

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G  P   +Y +L+  Y    LF  A+ +++ M    I  +V TYN ++    +    
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 486

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L  EM+ R  +P+  +YS+++  +  A +LD+   L   + S  +E    L +T+
Sbjct: 487 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 546

Query: 341 IVAYERVGLVAHAKRLLHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++   +V  +A A++   ELRQ       N +     ++I  +   + +   +     ++
Sbjct: 547 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKES 604

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                 + +  ++ ++SR         +  +++S+G  PD +    V+ +YG+  + + A
Sbjct: 605 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664

Query: 455 DDLYSEMQEEG 465
             L+SEM+  G
Sbjct: 665 SRLFSEMKCSG 675



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 218/438 (49%), Gaps = 15/438 (3%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSG-DLVLYSN 94
           ELA     E+   G+       +T I    + G    A + L     D   G D   Y+ 
Sbjct: 105 ELAAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALL-----DAAPGPDAGAYTA 159

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIEEMREQ 153
           L+    +   +  A+++F R+  SG+ P +V YN +++V+ K A  +KE   L+  M+E 
Sbjct: 160 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 219

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           GV PD  +Y+TL++       + EA  VF EM       D  T N ++DVYG+     +A
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 279

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +   M ++G  PSVV+YN+L+  Y +  L  +A+ L + M+ K ++ +VVTY T+I  
Sbjct: 280 IEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 339

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             ++ + + A     EM   G +PN  TY+ +I + G  GK      +F + RS+G   D
Sbjct: 340 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPD 399

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIEEATWVFR 389
            V + T++  + + GL +    +  E+++   IP R+T ++++   +R G  + A  +++
Sbjct: 400 IVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK 459

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  +AG   D+S +  ++   +R  ++    ++F +M      PD +  + +L++Y   +
Sbjct: 460 RMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAK 519

Query: 450 EFET----ADDLYSEMQE 463
             +     +DD+YSE  E
Sbjct: 520 RLDKMKALSDDIYSERIE 537



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 214/420 (50%), Gaps = 5/420 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-KFVEALS 180
           PD  AY  +++ F +A  F++A  +   M + GV+P  V+Y+ +L++Y +    + E + 
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           + A M E     D  T N +I    +  + K+A ++F  M+  G +P  V++N+LL VYG
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EAI + + M+R     +VVTYN++I  Y K    E+A  L QEM+ +G++P+ +
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I+   +AGK+D A + + ++  +G + +   Y  +I  +   G       +  E 
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   AG + +   +  +I  +SR   +
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              ++++++M  AG +PD      VL++  +   +E A+ L++EM+E  C   +  +  +
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           L  Y   K  + +++L + + S+       L   +  +  + N L +A +    + ++R 
Sbjct: 512 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 571



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/528 (22%), Positives = 254/528 (48%), Gaps = 11/528 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-F 70
           +A   P   AY  ++    RA ++  A  +F  M   G+ P   TY+ ++  + K  + +
Sbjct: 147 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 206

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              +  +  M++  V+ D   Y+ LI   R+ + Y +A  +F  +K+SG  PD V +N++
Sbjct: 207 KEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 266

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++V+GKA+   EA  +I+EM   G  P  V+Y++L++ YV++    +A+++  EM     
Sbjct: 267 LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM 326

Query: 191 PLDLTTCNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             D+ T   +I   D  G++D A      +  M + G  P++ +YN L++++G    F E
Sbjct: 327 KPDVVTYTTLISGLDRAGKIDAAIVE---YDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 383

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            + +F   +      ++VT+NT++ ++G++    + + + +EM+  G  P   TY ++I+
Sbjct: 384 MMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 443

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + + G  D A  +++++  +G+  D   Y  ++ A  R G    A++L  E+ + +  P
Sbjct: 444 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503

Query: 368 RETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
            E + + L    A A R+++   +    +         +   ++ + S+    A   + F
Sbjct: 504 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 563

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            ++R      D +++  +++ YGK R     + + S M+E     S   +  ++ +Y   
Sbjct: 564 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 623

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            D    E++   + S      +  ++ V   Y R  ++ +ASR+ + M
Sbjct: 624 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 671



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 187/383 (48%), Gaps = 39/383 (10%)

Query: 17  PSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN +++ + +R K  E+   +FDE R  G  PD  T++TL+  FG+ G+ DS +S
Sbjct: 363 PNLCTYNALIKMHGVRGKFPEMM-AVFDEFRSAGFVPDIVTWNTLLAVFGQNGL-DSEVS 420

Query: 76  WL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + ++M++     +   Y +LI    +   +  A+ I+ R+  +GI PD+  YN +++  
Sbjct: 421 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 480

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VENHK 174
            +   +++A  L  EM E+  KPD  SYS+LL+ Y                    +E H 
Sbjct: 481 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 540

Query: 175 FV---------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++               EA   F E+ +  C LD+   N M+ +YG+  M +  +++   
Sbjct: 541 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 600

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M++  I+ S  +YN+L+ +Y       +  ++   ++   +  +  +YNT+I  YG+  +
Sbjct: 601 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 660

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A+ L  EM+  G++P+ +TY+  +  +      + A  L + + + G + +   Y +
Sbjct: 661 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 720

Query: 340 MIVAYERVGLVAHAKRLLHELRQ 362
           ++  Y R G +  AK  +  L Q
Sbjct: 721 IVEGYCRNGKLTDAKIFVSNLPQ 743



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 36/199 (18%)

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           AA+  ++L   GV   P +  T I    R G +A A  LL     P+       ++  +R
Sbjct: 107 AAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSR 166

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS-------------------------- 411
           AGR  +A  VFR+  D+G    I  +  ++ ++S                          
Sbjct: 167 AGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRY 226

Query: 412 ----------RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
                     R   Y    +VF++M+++G+ PD      +L+ YGK R  + A ++  EM
Sbjct: 227 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 286

Query: 462 QEEGCVFSDQVHFQMLSLY 480
           +  GC  S   +  ++S Y
Sbjct: 287 ERVGCPPSVVTYNSLISSY 305


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 215/436 (49%), Gaps = 39/436 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  YN ++  + ++    LA  L  +M +R +  D +TYST+I    ++G  D
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +AIS  ++ME   +   LV Y++L+    K   ++  + +   + S  I+P+++ +N +I
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +VF K    +EA  L +EM  +G+ P+T++Y++L++ Y   ++  EA             
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA------------- 329

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                 N M+D+                M +    P +V++ +L++ Y + +   E + L
Sbjct: 330 ------NNMLDL----------------MVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR + ++ +  N VTY+ +++ + +S + E A  L QEM + G+ P+ +TY  ++     
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCD 427

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            GKL++A  +F+ L+ S + +D V+Y  +I    + G V  A  L   L     +PN + 
Sbjct: 428 NGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 487

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I+ L + G + EA  + R+  + G   +   +  +I    R+       ++ E+M+
Sbjct: 488 YTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547

Query: 428 SAGYFPDSHIIALVLN 443
           S G+  D+  I +V++
Sbjct: 548 SCGFSADASSIKMVID 563



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/529 (21%), Positives = 243/529 (45%), Gaps = 4/529 (0%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D++   +  S     Y   LR+ +   + + A  LF EM +    P    +S   +    
Sbjct: 18  DFLCTISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVAS 77

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
              F+  + + ++ME + ++ ++   + +I    +      A S+  ++   G  PD   
Sbjct: 78  TKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT 137

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           +NT+IN         EA +L+  M E G +P+ V+Y++++N   ++     AL +  +M+
Sbjct: 138 FNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMD 197

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E N   D+ T + +ID   +      A  LF  M   GI  S+V+YN+L+    +A  + 
Sbjct: 198 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWN 257

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           + + L + M  ++I  NV+T+N +I ++ K  + ++A  L +EM  +GI PN ITY++++
Sbjct: 258 DGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLM 317

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
             +    +L  A  +   +  +    D V + ++I  Y +V  V    +L  ++ +    
Sbjct: 318 DGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLV 377

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            NT+     +    ++G++E A  +F++    G + D+  +G +++    N K    +E+
Sbjct: 378 ANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI 437

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           FE ++ +    D  +  +++    K  + E A +L+  +  +G   +   +  M+S    
Sbjct: 438 FEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 497

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +   +    L  +++ D N      ++ +   + R   L  +++++  M
Sbjct: 498 KGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 205/419 (48%), Gaps = 9/419 (2%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++    +  + E      DEM   G  PDR+T+++L+    + G    A+  L  M Q
Sbjct: 285 NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ 344

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
           +    D+  Y++LI    KL +  +A+ I +++      P+ V YNT+I+   K    +E
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLN--LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           A  L   +  +G+ PD  ++++L+       NH+   A+ +F EM    C  D  T N++
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL--AMELFEEMKTKGCHPDEFTYNML 462

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID        ++A  L   M   G   +VV+YNTL+  + + +   EA  +F  M+ + I
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
            +NVVTYNT+I    K+   E+A  LM +M   G++P+  TY++++  + +AG + +AA 
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI--PR--ETAITILA 376
           + Q + S+G E D V Y T+I+   + G V  A RLL  ++    +  P+     I  L 
Sbjct: 583 IVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF 642

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPD 434
           R  R  EA  +FR+  + G+  D   +  +   L S        ++   +M   G+ PD
Sbjct: 643 REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 222/457 (48%), Gaps = 9/457 (1%)

Query: 5   ILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           +L +I+E +   + P  F +N ++  + R    + A  + D M Q G  PD +TY++LI 
Sbjct: 300 VLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIF 359

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K G  + A+  L QM     S + V Y+ LI    K +   +A  +   L S GI+P
Sbjct: 360 GLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 419

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+  +N++I         + A  L EEM+ +G  PD  +Y+ L++      +  EALS+ 
Sbjct: 420 DVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLL 479

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM    C  ++ T N +ID + +    ++A+ +F  M   GI  +VV+YNTL+    + 
Sbjct: 480 KEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKN 539

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  L   M  + ++ +  TYN+++  + ++ + +KA +++Q M + G EP+++TY
Sbjct: 540 RRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTY 599

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            T+I    KAG+++ A+ L + ++  G+ + P  Y  +I A  R    + A RL  E+ +
Sbjct: 600 GTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMME 659

Query: 363 PNTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               P      ++ R      G I EA     +  D G + D S F  + E         
Sbjct: 660 KGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMED 719

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            +I++  ++     F DS +  ++   + K+R+F+ A
Sbjct: 720 TLIKLVNRVMKQANFSDSEVSMIM--GFLKIRKFQDA 754



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/533 (23%), Positives = 237/533 (44%), Gaps = 13/533 (2%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +LDW +++  + PS   Y  VLR + +   +     +  EM+  G    R T+  LI  +
Sbjct: 91  LLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESY 150

Query: 65  GKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
            K  +FD A++ +  ME++  +  D   Y+ L+ +    +       + SR+ S GI PD
Sbjct: 151 AKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPD 210

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +I    +A   + A L++EEM   G+ PD  +++TL+  ++E      AL +  
Sbjct: 211 VTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIRE 270

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    CP    T N+++  Y +    ++       M   G  P   ++N+L+       
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A+ +  +M ++  + ++ TYN++I    K  E E+A  ++ +M  R   PN +TY+
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I+   K  +++ A  L + L S G+  D   + ++I           A  L  E++  
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450

Query: 364 NTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P E      I  L   GR+EEA  + ++   +G  +++  +  +I+ F +NK+    
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E+F++M   G   +      +++   K R  E A  L  +M  EG       +  +L+ 
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGI----YERANRLNDASRIM 528
           +    D      + + + S    N  E   V  G       +A R+  ASR++
Sbjct: 571 FCRAGDIKKAADIVQTMTS----NGCEPDSVTYGTLILGLSKAGRVELASRLL 619



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 213/476 (44%), Gaps = 4/476 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + EE       F YN +L  ++   + +L   +   M  RGI PD  T++ LI
Sbjct: 159 AVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILI 218

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               +      AI  +++M    +S D   ++ L++   +  + + A+ I  ++ ++G  
Sbjct: 219 KALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCP 278

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
              V  N +++ + K    +E    I+EM  +G +PD  ++++L+N          AL +
Sbjct: 279 SSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEI 338

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M +     D+ T N +I    +L   ++A  +   M      P+ V+YNTL+    +
Sbjct: 339 LDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCK 398

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA  L R++  K I  +V T+N++I+    +  H  A  L +EM+ +G  P+  T
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFT 458

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ +I      G+L+ A  L +++ SSG   + V Y T+I  + +   +  A+ +  E+ 
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                 N +   T I  L +  R+EEA  +  Q    G   D   +  ++  F R     
Sbjct: 519 LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIK 578

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
              ++ + M S G  PDS     ++    K    E A  L   +Q +G V + Q +
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 187/448 (41%), Gaps = 42/448 (9%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           V+Y  ++    K   +     +   +K +G       +  +I  + K +LF EA  +++ 
Sbjct: 106 VIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDI 165

Query: 150 MREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           M E+ G+K D  +Y+ LLN+ V+ +K      V + M       D+TT NI+I    +  
Sbjct: 166 MEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAH 225

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             + A  +   M   G+ P   ++ TL++ + E      A+ +   M       + VT N
Sbjct: 226 QIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVN 285

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            ++  Y K    E+  + + EM N G  P+  T+++++    + G +  A  +   +   
Sbjct: 286 VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE 345

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHE--LR--QPNTIPRETAITILARAGRIEEA 384
           G + D   Y ++I    ++G V  A  +L++  LR   PNT+   T I+ L +  ++EEA
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEA 405

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           T + R     G + D+  F  +I+                               L L +
Sbjct: 406 TELARVLTSKGILPDVCTFNSLIQ------------------------------GLCLTN 435

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNIN 503
             +L     A +L+ EM+ +GC   D+  + ML     +R       SL + ++S     
Sbjct: 436 NHRL-----AMELFEEMKTKGC-HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRM 531
               ++ +   + +  R+ +A  I + M
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEM 517



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 5/257 (1%)

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           D L W+ ++    PS V Y  +LR  G+   FG    + + M+    E    T+  +I+ 
Sbjct: 90  DLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIES 149

Query: 274 YGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           Y K    ++A  ++  M+   G++ +A TY+ ++ +     KL    ++  ++ S G++ 
Sbjct: 150 YAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKP 209

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVF 388
           D   +  +I A  R   +  A  ++ E+      P E   T L +     G +  A  + 
Sbjct: 210 DVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIR 269

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            Q   AG          ++  + +  +   V+   ++M + G+ PD      ++N   ++
Sbjct: 270 EQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329

Query: 449 REFETADDLYSEMQEEG 465
              + A ++   M +EG
Sbjct: 330 GHVKHALEILDVMLQEG 346


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 232/491 (47%), Gaps = 44/491 (8%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + A  W+    L   M++ G+APDRYTY+TLI+C  +  ++  A  
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M+      D V +++L+++  K   + +AI +   ++  G  P +V YN++I+ + 
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------------- 166
           K  L ++A  L +EM  +G+KPD V+Y+TL+                             
Sbjct: 325 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384

Query: 167 --NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             N  ++ H    KF E ++VF E        D+ T N ++ V+GQ  +  +   +F  M
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 444

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G  P   +Y +L+  Y    LF  A+ +++ M    I  +V TYN ++    +    
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L  EM+ R  +P+  +YS+++  +  A +LD+   L   + S  +E    L +T+
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564

Query: 341 IVAYERVGLVAHAKRLLHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++   +V  +A A++   ELRQ       N +     ++I  +   + +   +     ++
Sbjct: 565 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVL--NAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                 + +  ++ ++SR         +  +++S+G  PD +    V+ +YG+  + + A
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682

Query: 455 DDLYSEMQEEG 465
             L+SEM+  G
Sbjct: 683 SRLFSEMKCSG 693



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 242/494 (48%), Gaps = 12/494 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V A    +R + RA +   A  L D        PD   Y+ L++ F + G F  A+
Sbjct: 139 HHPRVLA--TAIRVMARAGRLAEASALLDA----APGPDAGAYTALVSAFSRAGRFRDAV 192

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +  ++M    V   +V Y+ ++ +  K++  + + + + + +K  G+ PD   YNT+I+ 
Sbjct: 193 AVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISC 252

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +  L+KEA  + +EM+  G +PD V++++LL++Y +  +  EA+ V  EM  V CP  
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I  Y +  + + A  L   M   G+ P VV+Y TL+     A     AI  + 
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 372

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R   + N+ TYN +IK++G   +  +   +  E ++ G  P+ +T++T++A++G+ G
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNG 432

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
                + +F++++ +G   +   Y ++I +Y R GL   A    KR++     P+     
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN 492

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             ++ LAR GR E+A  +F +  +     D   +  ++  ++  K+   +  + + + S 
Sbjct: 493 AVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSE 552

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
              P + ++  ++    K+     A+  + E++++ C     V   M+S+YG  +    +
Sbjct: 553 RIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV 612

Query: 490 ESLFERLDSDSNIN 503
           E +   L  +S IN
Sbjct: 613 EKILS-LMKESAIN 625



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 214/420 (50%), Gaps = 5/420 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-KFVEALS 180
           PD  AY  +++ F +A  F++A  +   M + GV+P  V+Y+ +L++Y +    + E + 
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           + A M E     D  T N +I    +  + K+A ++F  M+  G +P  V++N+LL VYG
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EAI + + M+R     +VVTYN++I  Y K    E+A  L QEM+ +G++P+ +
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I+   +AGK+D A + + ++  +G + +   Y  +I  +   G       +  E 
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   AG + +   +  +I  +SR   +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              ++++++M  AG +PD      VL++  +   +E A+ L++EM+E  C   +  +  +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           L  Y   K  + +++L + + S+       L   +  +  + N L +A +    + ++R 
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 187/383 (48%), Gaps = 39/383 (10%)

Query: 17  PSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN +++ + +R K  E+   +FDE R  G  PD  T++TL+  FG+ G+ DS +S
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMM-AVFDEFRSAGFVPDIVTWNTLLAVFGQNGL-DSEVS 438

Query: 76  WL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + ++M++     +   Y +LI    +   +  A+ I+ R+  +GI PD+  YN +++  
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VENHK 174
            +   +++A  L  EM E+  KPD  SYS+LL+ Y                    +E H 
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558

Query: 175 FV---------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++               EA   F E+ +  C LD+   N M+ +YG+  M +  +++   
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M++  I+ S  +YN+L+ +Y       +  ++   ++   +  +  +YNT+I  YG+  +
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQ 678

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A+ L  EM+  G++P+ +TY+  +  +      + A  L + + + G + +   Y +
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738

Query: 340 MIVAYERVGLVAHAKRLLHELRQ 362
           ++  Y R G +  AK  +  L Q
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQ 761



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 36/207 (17%)

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           G+ G    A    ++L   GV   P +  T I    R G +A A  LL     P+     
Sbjct: 117 GQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYT 176

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS------------------ 411
             ++  +RAGR  +A  VFR+  D+G    I  +  ++ ++S                  
Sbjct: 177 ALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKE 236

Query: 412 ------------------RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                             R   Y    +VF++M+++G+ PD      +L+ YGK R  + 
Sbjct: 237 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDE 296

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           A ++  EM+  GC  S   +  ++S Y
Sbjct: 297 AIEVIQEMERVGCPPSVVTYNSLISSY 323


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 213/449 (47%), Gaps = 4/449 (0%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN ++    R    E A  + + M  +G+ P  +TY+ +I    K+G +  A   L +M
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +S D   Y+ L+  + +  ++S+A  IF  +   G+VPDLV+++++I VF + +  
Sbjct: 215 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL 274

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A +   +M++ G+ PD V Y+ L++ Y  N   +EAL +  EM E  C LD+   N +
Sbjct: 275 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ++   +  M  DAD+LF  M + G  P   ++ TL+  + +     +A+ LF  M ++ I
Sbjct: 335 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 394

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + ++V YNT+I  + K  E EKA+ L   M +R I PN ITY  +I  +   G +  A  
Sbjct: 395 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 454

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITILA 376
           L+  +   G++   V   T+I  Y R G  + A     R++ +   P+ I   T I    
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV 514

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R   +++A     +    G + DI  +  ++  F R  +      V  KM   G  PD  
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
               ++N +        A   + EM + G
Sbjct: 575 TYTALINGHVTQDNLNEAFRFHDEMLQRG 603



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 186/360 (51%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP    YN +L    R   +  A  +F EM ++G+ PD  ++S+LI  F +    D A+ 
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + M++  +  D V+Y+ L+    +  +  +A+ I   +   G V D++AYNT++N   
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  +A  L +EM E+G  PD  +++TL++ + ++    +ALS+F  M + N   D+ 
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +ID + ++   + A  L+  M    I P+ ++Y  L+  Y       EA  L+ +M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I+  +VT NT+IK Y +S +  KA   +  M  +G+ P+ I+Y+T+I  + +   +
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D+A +   K+   G+  D + Y  ++  + R G +  A+ +L ++ +    P  +  T L
Sbjct: 520 DKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+F YN ++  + +  ++  A G+  EM   G++PD  TY+TL+    +   F  A   
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 245

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  V  DLV +S+LI +  +     +A+  F  +K  G+VPD V Y  +++ + +
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 305

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  + +EM EQG   D ++Y+T+LN   +     +A  +F EM E     D  T
Sbjct: 306 NGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 365

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + Q      A  LF +M +  I P +V+YNTL+  + +     +A  L+  M 
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            ++I  N +TY  +I  Y       +A  L   M  +GI+P  +T +T+I  + ++G   
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A     ++ + GV  D + Y T+I  + R   +  A   ++++ +    P+ I     +
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R GR++EA  V R+  + G   D S +  +I                ++M   G+ 
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605

Query: 433 PD 434
           PD
Sbjct: 606 PD 607



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 212/490 (43%), Gaps = 39/490 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y  S+ A N +L  +++    ELA  +  E+ + GI  + YT + ++    K+G FD   
Sbjct: 79  YLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVK 138

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S+L +ME + +  D+V Y+ LI    +     +A  I + +   G+ P L  YN +IN  
Sbjct: 139 SFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGL 198

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   +  A+ ++ EM   G+ PDT +Y+TLL        F EA  +F EM       DL
Sbjct: 199 CKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDL 258

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP--------------------------- 227
            + + +I V+ +      A   F  M+K G+ P                           
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318

Query: 228 --------SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
                    V++YNT+L    + ++  +A  LF  M  +    +  T+ T+I  + +   
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             KA +L   M  R I+P+ + Y+T+I  + K G++++A+ L+  + S  +  + + Y  
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438

Query: 340 MIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I AY  VG V+ A RL    + +  +P  +   T I    R+G   +A     +    G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D   +  +I  F R            KM   G  PD     +V+N + +    + A+
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558

Query: 456 DLYSEMQEEG 465
            +  +M E+G
Sbjct: 559 LVLRKMIEKG 568



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/383 (21%), Positives = 178/383 (46%), Gaps = 8/383 (2%)

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           ARKL + ++A  I   L+S G +  + A N+++    K    + A  +  E+   G++ +
Sbjct: 61  ARKLREGTEAFRI---LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELN 117

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             + + ++N   ++ KF +  S  +EM       D+ T N +I  Y +  + ++A  +  
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
           SM   G+ PS+ +YN ++    +   +  A  +   M    +  +  TYNT++    +  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A  +  EM  +G+ P+ +++S++IA++ +   LD+A + F+ ++  G+  D V+Y 
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT 297

Query: 339 TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
            ++  Y R G +  A ++  E+ +     + I   T +  L +   + +A  +F +  + 
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D   F  +I    ++      + +F  M      PD      +++ + K+ E E A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417

Query: 455 DDLYSEMQEEGCVFSDQVHFQML 477
            +L+  M     +F + + + +L
Sbjct: 418 SELWDGMISRK-IFPNHITYGIL 439



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 23/372 (6%)

Query: 130 MINVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           M++VF +++   +A+ LI  M R  GV                    VE +         
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSR------------------VEVVEALVSSMCG 42

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           NC  +    +++I  Y Q    ++    F  +R  G   S+ + N+LL    + +    A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + R + R  IE NV T N M+    K  + +   + + EM+  GI  + +TY+T+I  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + + G L+ A  +   +   G++     Y  +I    + G  A AK +L E+      P+
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T    T +    R     EA  +F +    G V D+  F  +I +FSRN+     +  F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M+  G  PD+ I  ++++ Y +      A  +  EM E+GCV     +  +L+     K
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 485 DFNMLESLFERL 496
                + LF+ +
Sbjct: 343 MLTDADKLFDEM 354



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 148/343 (43%), Gaps = 4/343 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + ++ +I  + +A+  +E       +R +G      + ++LL   V+      A  V  E
Sbjct: 49  LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +      L++ T NIM++   +     D       M   GI   +V+YNTL+  Y    L
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  +   M  K ++ ++ TYN +I    K   + +A  ++ EM N G+ P+  TY+T
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    +      A  +F ++   GV  D V + ++I  + R   +  A     ++++  
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P     T+L     R G + EA  +  +  + G V D+  +  ++    + K   +  
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           ++F++M   G  PD +    +++ + +      A  L+  M +
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 391



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 35/174 (20%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++   N V++   R+     A      M  +G+APD  +Y+TLI  F +E   D
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMD 520

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A  W+ +ME++                                   G++PD++ YN ++
Sbjct: 521 KAFLWINKMEKE-----------------------------------GLLPDIITYNVVM 545

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           N F +    +EA L++ +M E+G+ PD  +Y+ L+N +V      EA     EM
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEM 599


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 234/465 (50%), Gaps = 7/465 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V++ NV++  + R    + A  +  +M + GI P   T++ LI     EG    A+   
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M +     +++ Y+ +I    K  + S A+ +F +++ +G  PD+V YNT+I+   K 
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKD 241

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +L  +A   + EM ++G+ P+  +Y+ +++ +    +  EA  +F EM   +   D  T 
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I++D   +  M  +A  +F +M + G++P++ +YN L+  Y    L  EA  +F +M R
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +     V +YN +I  + KS   ++A +L+ EM ++ + P+ +TYST++    + G+   
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  +F+++ S G+  + V Y  ++  + + G +  A +LL  ++    +PN +     I 
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            +  AG++E A  +F + F  G    I  +  MI+   +        ++F KM   G+ P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH-FQML 477
           +S    +++  + + ++  TA  L  EM   G  FS  +  FQML
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMV--GKRFSANLSTFQML 584



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 218/448 (48%), Gaps = 11/448 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   +N ++  +    + + A  LF+EM +RG  P+  +Y+T+I    K G    A+  
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++MEQ+    D+V Y+ +I+   K    + A+   S +   GI P++  YN M++ F  
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L +EM  + V PDTV+ + L++   +     EA  VF  M E     +++T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D Y    +  +A ++F  M + G  P V SYN L+  + ++    EA  L   M 
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  + VTY+T+++   +    ++A N+ +EM + G+ PN +TYS ++  + K G LD
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L + ++   +E + V +  +I      G +  AK L  +L      P     T++ 
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515

Query: 377 RA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +     G  +EA  +FR+  D G + +   +  MI+ F +N+  +  I + ++M    + 
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 575

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSE 460
            +       L+++  L + E+ D++ S+
Sbjct: 576 AN-------LSTFQMLLDLESQDEIISQ 596



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 167/350 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  YN ++ ++ + +    A     EM  RGI P+ +TY+ ++  F   G  
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M    V  D V  + L++   K    S+A  +F  +   G+ P++  YN +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +   +L  EA+ + E M  QG  P   SY+ L+N + ++ +  EA S+ AEM     
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T + ++    Q    K+A  +F  M   G+ P++V+Y+ LL  + +     EA+ 
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + MQ K++E N+V +  +I+    + + E A  L  ++   GI P   TY+ +I    
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G  D A  LF+K+   G   +   Y  MI  + +    + A RL+ E+
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 193/421 (45%), Gaps = 10/421 (2%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P    +   +  F K+  + + +S   QM+   V+ ++   + LI    +L+    A+SI
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
             ++   GI P    +N +IN        KEA  L  EM  +G +P+ +SY+T++N   +
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
                 A+ VF +M +  C  D+ T N +ID   +  +  DA      M   GI P+V +
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN ++  +       EA  LF+ M  +++  + VT   ++    K     +A  + + M 
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +G+EPN  TY+ ++  +     ++ A  +F+ +   G       Y  +I  + +   + 
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 352 HAKRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            AK LL    H+   P+T+   T +  L + GR +EA  +F++    G + ++  +  ++
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPD-SHIIALVLNSY--GKLREFETADDLYSEMQEE 464
           + F ++      +++ + M+     P+  H   L+   +  GKL   E A +L+S++  +
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL---EVAKELFSKLFAD 502

Query: 465 G 465
           G
Sbjct: 503 G 503



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 31/354 (8%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A++ F R+      P +  +   +  F K K +     L  +M   GV  +  S + L+N
Sbjct: 72  ALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLIN 131

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
                +    A+S+  +M ++      +T N +I+        K+A  LF  M + G +P
Sbjct: 132 CLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V+SYNT++    +      A+ +F+ M++   + +VVTYNT+I    K      A   +
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM +RGI PN  TY+ ++  +   G+L+ A  LF+++    V                 
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV----------------- 294

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
                          P+T+     +  L + G + EA  VF    + G   +IS +  ++
Sbjct: 295 --------------MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           + +   +      +VFE M   G  P  H   +++N + K R  + A  L +EM
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEM 394



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 35/295 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++  YN ++      +    A  +F+ M ++G AP  ++Y+ LI  F K    D
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S L +M    ++ D V YS L++   +     +A++IF  + S G++P+LV Y+ ++
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K     EA  L++ M+E+ ++P+ V ++ L          +E +            
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL----------IEGMF----------- 484

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                      + G+L++AK+   LF  +   GI P++ +Y  +++   +  L  EA  L
Sbjct: 485 -----------IAGKLEVAKE---LFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           FR M+      N  +YN MI+ + ++ +   A  L+ EM  +    N  T+  ++
Sbjct: 531 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/324 (19%), Positives = 137/324 (42%), Gaps = 4/324 (1%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA   F+ M +M   PSV  +   L  + + + +   + L   M    +  NV + N +I
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               +    + A +++ +M   GI P A T++ +I      GK+  A  LF ++   G E
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            + + Y T+I    + G  + A  +  ++ Q    P+ +   T I  L +   + +A   
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +  D G   ++  + CM+  F    +      +F++M      PD+  + ++++   K
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
                 A  ++  M E+G   +   +  ++  Y  ++  N  + +FE +           
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370

Query: 508 HHVVAGIYERANRLNDASRIMNRM 531
           ++++   + ++ R+++A  ++  M
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEM 394



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 35/243 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--C---------- 63
           +P V +YN+++    ++++ + A  L  EM  + + PD  TYSTL+   C          
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 64  -----------------------FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
                                  F K G  D A+  L+ M++ ++  ++V ++ LIE   
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
                  A  +FS+L + GI P +  Y  MI    K  L  EA  L  +M + G  P++ 
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+ ++  +++N     A+ +  EM       +L+T  +++D+  Q ++     R     
Sbjct: 545 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQFMRGSSQG 604

Query: 221 RKM 223
           RKM
Sbjct: 605 RKM 607



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 59/123 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E +  P++  + +++  +  A + E+A  LF ++   GI P   TY+ +I    KEG+ 
Sbjct: 465 QEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLS 524

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++ME D    +   Y+ +I+   +  D S AI +   +       +L  +  +
Sbjct: 525 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQML 584

Query: 131 INV 133
           +++
Sbjct: 585 LDL 587


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 5/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ YN+++R +    + E A G+  +MR  G AP+  TY+TL+  F + G  D A  
Sbjct: 7   APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66

Query: 76  WLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  M E+     +LV +++++    K      A  +F  +   G+ PD+V+YNT+++ +
Sbjct: 67  VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     E+  +  EM ++G+ PD V++++L++   +     +A+++ A+M E    ++ 
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +ID + +     DA      MRK GI PSVV YN L+  Y +      A  L R 
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ K ++ +VVTY+T+I  Y K    + A  L Q+M  +G+ P+AITYS++I    +  +
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L+ A  LF+ +   GV+ D   Y T+I  + + G V  A  L  E+ +    P+ +    
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKD 399
            I  L+++ R +EA  +  + +    V D
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPD 395



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 212/438 (48%), Gaps = 17/438 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++  + EE    P++  +N ++  + +A + E A  +FDEM + G+APD  +Y+TL++ +
Sbjct: 67  VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    +++   +M Q  +  D+V +++LI    K  +  +A+++ ++++  G+  + 
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +  +I+ F K     +A L +EEMR+ G++P  V Y+ L+N Y +  +   A  +  E
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D+ T + +I  Y ++     A +L   M K G+ P  ++Y++L+R   E + 
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  LF  M +  ++ +  TY T+I  + K    EKA +L  EM  +G+ P+ +TYS 
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I    K+ +   A  L  KL       D + Y  +++   +    A  K ++  L+   
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK----AEFKSVVALLKG-- 420

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                         G ++EA  V++   D     D SV+  +I    R       +   +
Sbjct: 421 ----------FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 470

Query: 425 KMRSAGYFPDS-HIIALV 441
           +M  +G+ P+S   I+LV
Sbjct: 471 QMLRSGFSPNSTSTISLV 488



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 190/396 (47%), Gaps = 5/396 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M + G+AP+ YTY+ L+      G  + A+  +  M     + + V Y+ L+    +  +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 105 YSKAISIFSRLKSSGIV-PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
              A  + S ++  G   P+LV +N+M+N   KA   + AR + +EM  +G+ PD VSY+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TLL+ Y +     E+L+VF+EM +     D+ T   +I    +    + A  L   MR+ 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G+  + V++  L+  + +     +A+     M++  I+ +VV YN +I  Y K    + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L++EM+ + ++P+ +TYSTII+ + K G LD A  L QK+   GV  D + Y ++I  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKD 399
                 +  A  L   + Q    P E   T L     + G +E+A  +  +    G + D
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           +  +  +I   S++ +      +  K+      PD+
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P++  YN ++         +EA  ++ +MR  G  P+ V+Y+TL+  +    +   A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 179 LSVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
             V + M  E N   +L T N M++   +    + A ++F  M + G+ P VVSYNTLL 
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            Y +     E++ +F  M ++ +  +VVT+ ++I    K+   E+A  L+ +M+ RG+  
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +T++ +I  + K G LD A +  +++R  G++   V Y  +I  Y ++G +  A+ L+
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 358 HELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+     +P+ +   T I+   + G ++ A  + ++    G + D   +  +I      
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           K+  +  E+FE M   G  PD      +++ + K    E A  L+ EM  +G V  D V 
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG-VLPDVVT 363

Query: 474 FQML 477
           + +L
Sbjct: 364 YSVL 367



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 27/328 (8%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M + G+ P+V +YN L+R         EA+ +   M+      N VTYNT++  + ++ E
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 280 HEKATNLMQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            + A  ++  M+  G  +PN +T+++++    KAG+++ A  +F ++   G+  D V Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
           T++  Y +VG +  +  +  E+ Q   +P     T L     +AG +E+A  +  Q  + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   +   F  +I+ F +     + +   E+MR  G  P       ++N Y KL   + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH----- 509
            +L  EM+ +  V  D V +  + + G  K  N        LDS   +N+K L       
Sbjct: 241 RELIREMEAKR-VKPDVVTYSTI-ISGYCKVGN--------LDSAFQLNQKMLKKGVLPD 290

Query: 510 ------VVAGIYERANRLNDASRIMNRM 531
                 ++ G+ E   RLNDA  +   M
Sbjct: 291 AITYSSLIRGLCEE-KRLNDACELFENM 317


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 5/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ YN+++R +    + E A G+  +MR  G AP+  TY+TL+  F + G  D A  
Sbjct: 149 APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 208

Query: 76  WLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  M E+     +LV +++++    K      A  +F  +   G+ PD+V+YNT+++ +
Sbjct: 209 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     E+  +  EM ++G+ PD V++++L++   +     +A+++ A+M E    ++ 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +ID + +     DA      MRK GI PSVV YN L+  Y +      A  L R 
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ K ++ +VVTY+T+I  Y K    + A  L Q+M  +G+ P+AITYS++I    +  +
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L+ A  LF+ +   GV+ D   Y T+I  + + G V  A  L  E+ +    P+ +    
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKD 399
            I  L+++ R +EA  +  + +    V D
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPD 537



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 208/431 (48%), Gaps = 16/431 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++  + EE    P++  +N ++  + +A + E A  +FDEM + G+APD  +Y+TL++ +
Sbjct: 209 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    +++   +M Q  +  D+V +++LI    K  +  +A+++ ++++  G+  + 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +  +I+ F K     +A L +EEMR+ G++P  V Y+ L+N Y +  +   A  +  E
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D+ T + +I  Y ++     A +L   M K G+ P  ++Y++L+R   E + 
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  LF  M +  ++ +  TY T+I  + K    EKA +L  EM  +G+ P+ +TYS 
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I    K+ +   A  L  KL       D + Y  +++   +    A  K ++  L+   
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK----AEFKSVVALLKG-- 562

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                         G ++EA  V++   D     D SV+  +I    R       +   +
Sbjct: 563 ----------FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 425 KMRSAGYFPDS 435
           +M  +G+ P+S
Sbjct: 613 QMLRSGFSPNS 623



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 204/468 (43%), Gaps = 77/468 (16%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+PSV AYN VL   L       A      M + G+AP+ YTY+ L+      G  + A+
Sbjct: 114 YAPSVPAYNAVLL-ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                     V GD+                          + +G  P+ V YNT++  F
Sbjct: 173 G---------VVGDM--------------------------RGAGCAPNAVTYNTLVAAF 197

Query: 135 GKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            +A     A  ++  MRE+G  KP+ V++++++N   +  +   A  VF E         
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE--------- 248

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                                     M + G+ P VVSYNTLL  Y +     E++ +F 
Sbjct: 249 --------------------------MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFS 282

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M ++ +  +VVT+ ++I    K+   E+A  L+ +M+ RG+  N +T++ +I  + K G
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            LD A +  +++R  G++   V Y  +I  Y ++G +  A+ L+ E+     +P+ +   
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I+   + G ++ A  + ++    G + D   +  +I      K+  +  E+FE M   
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G  PD      +++ + K    E A  L+ EM  +G V  D V + +L
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG-VLPDVVTYSVL 509



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 42/364 (11%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P + AYN ++     A L   AR  +  M   GV P+  +Y+ L+       +  EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           + V  +M                                   R  G  P+ V+YNTL+  
Sbjct: 172 VGVVGDM-----------------------------------RGAGCAPNAVTYNTLVAA 196

Query: 239 YGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           +  A     A  +  LM+ +   + N+VT+N+M+    K+   E A  +  EM   G+ P
Sbjct: 197 FCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           + ++Y+T+++ + K G L  +  +F ++   G+  D V + ++I A  + G +  A  L+
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316

Query: 358 HELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            ++R+      E   T L     + G +++A     +    G    +  +  +I  + + 
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +     E+  +M +    PD    + +++ Y K+   ++A  L  +M ++G V  D + 
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAIT 435

Query: 474 FQML 477
           +  L
Sbjct: 436 YSSL 439



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 147/359 (40%), Gaps = 63/359 (17%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  PSV +YN +L    +A L   A      M R  +  NV TYN +++        E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA------------------------ 319
             ++ +M+  G  PNA+TY+T++A + +AG+LD A                         
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 320 ------------MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
                        +F ++   G+  D V Y T++  Y +VG +  +  +  E+ Q   +P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 368 RETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
                T L     +AG +E+A  +  Q  + G   +   F  +I+ F +     + +   
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+MR  G  P       ++N Y KL   + A +L  EM+ +  V  D V +  + + G  
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR-VKPDVVTYSTI-ISGYC 409

Query: 484 KDFNMLESLFERLDSDSNINKKELHH-----------VVAGIYERANRLNDASRIMNRM 531
           K  N        LDS   +N+K L             ++ G+ E   RLNDA  +   M
Sbjct: 410 KVGN--------LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE-KRLNDACELFENM 459


>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
 gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
 gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 3/378 (0%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R S   P   AYN +L+  ++    + A  +  EM +RG++PD +TYS LI  +   
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G ++SA   L++ME   V  +  ++S L+   R   ++ K   +   +KS G+ PD   Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I+ FGK      A    + M  +G++PD V+++TL++ + ++ + + A  +F  M  
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C    TT NIMI+ YG  +   D  RL   M+  GI P+VV++ TL+ VYG++  F +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI     M+   ++ +   YN +I  Y +    E+A N  + M + G++P+ +  +++I 
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +G+  +   A  + Q ++ +GV+ D V Y T++ A  RV        +  E+      P
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687

Query: 368 RETAITILARAGRIEEAT 385
              A ++L  A R  + T
Sbjct: 688 DRKARSMLRSALRYMKQT 705



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 210/488 (43%), Gaps = 41/488 (8%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--ISWL 77
             YN ++    R    E A  L  +MRQ G   D   YS +I    +    DS   +   
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +++E+D++  D+ L +++I    K  D SKA+ +    +++G+        ++I+    +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA  L EE+R+ G+KP T +Y+ LL  YV+     +A S+ +EM +     D  T 
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377

Query: 198 NIMIDVY---GQLDMAKDA------------------------DRLFWS--------MRK 222
           +++ID Y   G+ + A+                          DR  W         M+ 
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           +G+ P    YN ++  +G+      A+  F  M  + IE + VT+NT+I  + K   H  
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  + + M+ RG  P A TY+ +I  +G   + D    L  K++S G+  + V + T++ 
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVK 398
            Y + G    A   L E++     P  T     I   A+ G  E+A   FR     G   
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +     +I  F  +++ A    V + M+  G  PD      ++ +  ++ +F+    +Y
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677

Query: 459 SEMQEEGC 466
            EM   GC
Sbjct: 678 EEMIMSGC 685



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 199/457 (43%), Gaps = 48/457 (10%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G+  + +SWLQ+   +      +LYS LI     L    K    F   +   + P  + Y
Sbjct: 148 GLAYAVVSWLQK--HNLCFSYELLYSILIH---ALGRSEKLYEAFLLSQKQTLTP--LTY 200

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF--VEALSVFAEM 185
           N +I    +    ++A  LI +MR+ G + D V+YS ++     ++K   V  L ++ E+
Sbjct: 201 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 260

Query: 186 NEVNCPLDLTTCNIMIDVYGQ----------LDMAK------------------------ 211
                 LD+   N +I  + +          L MA+                        
Sbjct: 261 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 320

Query: 212 -DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
            +A+ LF  +R+ GI P   +YN LL+ Y +     +A  +   M+++ +  +  TY+ +
Sbjct: 321 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 380

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I  Y  +   E A  +++EM+   ++PN+  +S ++A +   G+  +   + ++++S GV
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440

Query: 331 EIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           + D   Y  +I  + +   + HA     R+L E  +P+ +   T I    + GR   A  
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +F      G +   + +  MI  +   +++ ++  +  KM+S G  P+      +++ YG
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           K   F  A +   EM+  G   S  ++  +++ Y  R
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 191/445 (42%), Gaps = 79/445 (17%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+  G+++   EA LL ++   Q + P  ++Y+ L+     N+   +AL++ A+M 
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQK---QTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +     D    +++I                   R   ID SV+    LLR+Y E E   
Sbjct: 225 QDGYQSDFVNYSLVIQSL---------------TRSNKID-SVM----LLRLYKEIE--- 261

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
                     R ++E +V   N +I  + KS +  KA  L+   Q  G+     T  +II
Sbjct: 262 ----------RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           +    +G+   A  LF++LR SG++     Y  ++  Y + G +  A+ ++ E+ +    
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS-VFGCMIELFSRNKKYANVIE 421
           P E   ++L      AGR E A  V ++  +AG+V+  S VF  ++  F    ++    +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKE-MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFE----------------------------- 452
           V ++M+S G  PD     +V++++GK    +                             
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490

Query: 453 ------TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
                  A++++  M+  GC+     +  M++ YG ++ ++ ++ L  ++ S   +    
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550

Query: 507 LHHVVAGIYERANRLNDASRIMNRM 531
            H  +  +Y ++ R NDA   +  M
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEM 575


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 5/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ YN+++R +    + E A G+  +MR  G AP+  TY+TL+  F + G  D A  
Sbjct: 149 APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 208

Query: 76  WLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  M E+     +LV +++++    K      A  +F  +   G+ PD+V+YNT+++ +
Sbjct: 209 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     E+  +  EM ++G+ PD V++++L++   +     +A+++ A+M E    ++ 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +ID + +     DA      MRK GI PSVV YN L+  Y +      A  L R 
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ K ++ +VVTY+T+I  Y K    + A  L Q+M  +G+ P+AITYS++I    +  +
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L+ A  LF+ +   GV+ D   Y T+I  + + G V  A  L  E+ +    P+ +    
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKD 399
            I  L+++ R +EA  +  + +    V D
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPD 537



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 212/438 (48%), Gaps = 17/438 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++  + EE    P++  +N ++  + +A + E A  +FDEM + G+APD  +Y+TL++ +
Sbjct: 209 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    +++   +M Q  +  D+V +++LI    K  +  +A+++ ++++  G+  + 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +  +I+ F K     +A L +EEMR+ G++P  V Y+ L+N Y +  +   A  +  E
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D+ T + +I  Y ++     A +L   M K G+ P  ++Y++L+R   E + 
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  LF  M +  ++ +  TY T+I  + K    EKA +L  EM  +G+ P+ +TYS 
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I    K+ +   A  L  KL       D + Y  +++   +    A  K ++  L+   
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK----AEFKSVVALLKG-- 562

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                         G ++EA  V++   D     D SV+  +I    R       +   +
Sbjct: 563 ----------FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHK 612

Query: 425 KMRSAGYFPDS-HIIALV 441
           +M  +G+ P+S   I+LV
Sbjct: 613 QMLRSGFSPNSTSTISLV 630



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 204/468 (43%), Gaps = 77/468 (16%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+PSV AYN VL   L       A      M + G+AP+ YTY+ L+      G  + A+
Sbjct: 114 YAPSVPAYNAVLL-ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                     V GD+                          + +G  P+ V YNT++  F
Sbjct: 173 G---------VVGDM--------------------------RGAGCAPNAVTYNTLVAAF 197

Query: 135 GKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            +A     A  ++  MRE+G  KP+ V++++++N   +  +   A  VF E         
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE--------- 248

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                                     M + G+ P VVSYNTLL  Y +     E++ +F 
Sbjct: 249 --------------------------MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFS 282

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M ++ +  +VVT+ ++I    K+   E+A  L+ +M+ RG+  N +T++ +I  + K G
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            LD A +  +++R  G++   V Y  +I  Y ++G +  A+ L+ E+     +P+ +   
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I+   + G ++ A  + ++    G + D   +  +I      K+  +  E+FE M   
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G  PD      +++ + K    E A  L+ EM  +G V  D V + +L
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG-VLPDVVTYSVL 509



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 42/364 (11%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P + AYN ++     A L   AR  +  M   GV P+  +Y+ L+       +  EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           + V  +M                                   R  G  P+ V+YNTL+  
Sbjct: 172 VGVVGDM-----------------------------------RGAGCAPNAVTYNTLVAA 196

Query: 239 YGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           +  A     A  +  LM+ +   + N+VT+N+M+    K+   E A  +  EM   G+ P
Sbjct: 197 FCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           + ++Y+T+++ + K G L  +  +F ++   G+  D V + ++I A  + G +  A  L+
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316

Query: 358 HELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            ++R+      E   T L     + G +++A     +    G    +  +  +I  + + 
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +     E+  +M +    PD    + +++ Y K+   ++A  L  +M ++G V  D + 
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAIT 435

Query: 474 FQML 477
           +  L
Sbjct: 436 YSSL 439



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 147/359 (40%), Gaps = 63/359 (17%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  PSV +YN +L    +A L   A      M R  +  NV TYN +++        E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA------------------------ 319
             ++ +M+  G  PNA+TY+T++A + +AG+LD A                         
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 320 ------------MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
                        +F ++   G+  D V Y T++  Y +VG +  +  +  E+ Q   +P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 368 RETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
                T L     +AG +E+A  +  Q  + G   +   F  +I+ F +     + +   
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+MR  G  P       ++N Y KL   + A +L  EM+ +  V  D V +  + + G  
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR-VKPDVVTYSTI-ISGYC 409

Query: 484 KDFNMLESLFERLDSDSNINKKELHH-----------VVAGIYERANRLNDASRIMNRM 531
           K  N        LDS   +N+K L             ++ G+ E   RLNDA  +   M
Sbjct: 410 KVGN--------LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE-KRLNDACELFENM 459


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 253/516 (49%), Gaps = 32/516 (6%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + +  W+    L D M++ GI  DRYTY+TLI+C  + G++  A  
Sbjct: 218 PALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQ 277

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M+      D V +++L+++  K   + +AI +  +++++G  P +V YN++I+ + 
Sbjct: 278 MFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYV 337

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L +EM  +G+KPD V+Y+TL++      K   AL+ ++EM    C  +L 
Sbjct: 338 KDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLC 397

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I ++G      +   +F  +R  G  P VV++NTLL V+G+  L  E   +F+ M
Sbjct: 398 TYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM 457

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++        TY ++I  Y +    ++A  + + M   GI P+  TY+ +++   + G+ 
Sbjct: 458 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRW 517

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A  LF ++     + D + Y +++ AY      A+AK+L           +  A++  
Sbjct: 518 VQAEKLFAEMEDRDCKPDELSYSSLLHAY------ANAKKL----------DKMKALSED 561

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             A RIE   W+         VK + +    +   S  +K       F+++R      D 
Sbjct: 562 IYAQRIEPHNWL---------VKTLVLVNNKVNSLSETEK------AFQELRRRRCSLDI 606

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           +++  +++ YGK +  +  +++ + M+E     S   +  ++ +Y    D    E++   
Sbjct: 607 NVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTE 666

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + S      +  ++ V   Y R  ++ +ASR+ + M
Sbjct: 667 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 702



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 210/420 (50%), Gaps = 5/420 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFVEALS 180
           PD  AY  +++ F +A  F++A  +   M + GV+P  V+Y+ +L++Y + +  + E + 
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M E    LD  T N +I    +  + ++A ++F  M+  G +P  V++N+LL VYG
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EAI + + M+      +VVTYN++I  Y K    E+A  L QEM+ RG++P+ +
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I+   + GK+D A   + ++  +G   +   Y  +I  +   G       +  +L
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   AG + +   +  +I  +SR   +
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              +E++++M  AG +PD      VL++  +   +  A+ L++EM++  C   +  +  +
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           L  Y   K  + +++L E + +        L   +  +  + N L++  +    + +RR 
Sbjct: 543 LHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRC 602



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 229/475 (48%), Gaps = 11/475 (2%)

Query: 51  APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAI 109
           APD   Y+ L++ F + G F  A++  ++M    V   LV Y+ ++ +  K+S  + + +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +   +K  GI  D   YNT+I+   +  L++EA  + +EM+  G +PD V++++LL++Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            +  +  EA+ V  +M    C   + T N +I  Y +  + ++A  L   M   G+ P V
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y TL+           A+  +  M R     N+ TYN +IK++G   +  +   +  +
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           +++ G  P+ +T++T++A++G+ G     + +F++++ +G   +   Y ++I +Y R GL
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481

Query: 350 VAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A    KR++     P+       ++ LAR GR  +A  +F +  D     D   +  
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHII---ALVLNSYGKLREFETADDLYSEMQ 462
           ++  ++  KK   +  + E + +    P + ++    LV N    L E E A   + E++
Sbjct: 542 LLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKA---FQELR 598

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
              C     V   M+S+YG  K    +E +   +  +S  +    ++ +  +Y R
Sbjct: 599 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSR 653



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 238/513 (46%), Gaps = 7/513 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + P    +N +L    +A++ E A G+  +M   G  P   TY++LI+ + K+G+ + 
Sbjct: 285 AGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEE 344

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+   Q+ME   +  D+V Y+ LI    ++     A++ +S +  +G  P+L  YN +I 
Sbjct: 345 ALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK 404

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           + G    F E  ++ +++R  G  PD V+++TLL ++ +N    E   VF EM +     
Sbjct: 405 MHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 464

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +I  Y +  +   A  ++  M + GI P + +YN +L        + +A  LF
Sbjct: 465 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLF 524

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+ ++ + + ++Y++++  Y  + + +K   L +++  + IEP+     T++ +  K 
Sbjct: 525 AEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKV 584

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA- 371
             L      FQ+LR     +D  +   M+  Y +  +V   + +L  +++ N+I    A 
Sbjct: 585 NSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKE-NSINHSAAT 643

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               + + +R G  E+   +  +   +G   D   +  +I  + R  +      +F +M+
Sbjct: 644 YNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 703

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +G  PD     + + SY     FE A DL   +  +GC  +++ +  +L  Y       
Sbjct: 704 CSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMV 763

Query: 488 MLESLFERLDSD-SNINKKELHHVVAGIYERAN 519
             +S    L      I+K+E H ++  + +R +
Sbjct: 764 EAKSFLSNLPKIYPGISKEEKHRLLELLAKRTS 796



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 205/430 (47%), Gaps = 40/430 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +PSV  YN ++   ++    E A  L  EM  RG+ PD  TY+TLI+   + G  
Sbjct: 318 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKI 377

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+A++   +M ++  S +L  Y+ LI++      +++ + +F  L+S+G VPD+V +NT+
Sbjct: 378 DAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTL 437

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + VFG+  L  E   + +EM++ G  P+  +Y +L++ Y     F +A+ ++  M E   
Sbjct: 438 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 497

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
             D++T N ++    +      A++LF  M      P  +SY++LL  Y  A        
Sbjct: 498 YPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKA 557

Query: 243 ---ELFGEAIH------------------------LFRLMQRKEIEQNVVTYNTMIKIYG 275
              +++ + I                          F+ ++R+    ++   N M+ IYG
Sbjct: 558 LSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYG 617

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+   +K   ++  M+   I  +A TY++++ ++ + G  ++   +  +++SSG+  D  
Sbjct: 618 KNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRY 677

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            Y T+I AY R G +  A RL  E++     P      I  ++     A  +F +A D  
Sbjct: 678 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS---YVANLMFEEAIDL- 733

Query: 396 EVKDISVFGC 405
            V+ +   GC
Sbjct: 734 -VRYLVAQGC 742



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 36/183 (19%)

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
           P +  T I  + R G +A A  LL     P+       ++  +RAGR  +A  VFR+  D
Sbjct: 154 PRVLPTAIRVFARAGCLAEASALLEAAPAPDASAYTALVSEFSRAGRFRDAVAVFRRMVD 213

Query: 394 AGEVKDISVFGCMIELFS------------------------------------RNKKYA 417
            G    +  +  ++ ++S                                    R   Y 
Sbjct: 214 GGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYR 273

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              ++F++M++AG+ PD      +L+ YGK R  E A  +  +M+  GC  S   +  ++
Sbjct: 274 EAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLI 333

Query: 478 SLY 480
           S Y
Sbjct: 334 SAY 336


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 4/458 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+   YN ++  + +A++ ++A G+F +M  +G+ P   TY+T+I    K    D
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    QQM    V  D V Y+ +I+   K     KA  +F ++   G+ PD + Y  +I
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   KA+    A  + ++M ++GVKP+  +Y+ L++ Y+   ++ E +    EM+  +  
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T  +++D   +     +A  LF SM + GI PSV  Y  +L  YG+     E   L
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM    I  N   +NT+I  Y K    ++  ++  +M+ +G+ PN +TY T+I    K
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G++D A + F ++ + GV  + V++ +++     V      + L  E+     +P+ + 
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +  L + GR+ EA  +       G   D+  +  +I+      +    +++ + M 
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           SAG  P+      +L+ Y K    + A  L+ EM  +G
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 208/428 (48%), Gaps = 7/428 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +++  SP V +YN+V+       Q + A+ LF EM   G++PD  TY+T+I    K    
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    QQM +  V  + V Y+ +I+   K  +   A  +F ++   G+ P  V YNT+
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA+    A  + ++M ++GVKPD V+Y+T+++   +     +A  VF +M +   
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T  I+ID   +      A+ +F  M   G+ P+  +YN L+  Y     + E + 
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M   ++E +V TY  ++    K+ +  +A +L   M  +GI+P+   Y  ++  +G
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           K G L     L   + ++G+  +  ++ T+I AY +  ++     +  +++Q    PN +
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I  L + GR+++A   F Q  + G   +  VF  ++       K+  V E+F +M
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 427 RSAGYFPD 434
            + G  PD
Sbjct: 602 LNQGIRPD 609



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 215/457 (47%), Gaps = 4/457 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y +++  + +A+  + A G+F +M  +G+ P+  TY+ LI  +   G ++  +  
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQR 422

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M    +  D+  Y  L++   K    ++A S+F  +   GI P +  Y  M++ +GK
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK 482

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                E   L+  M   G+ P+   ++T++  Y +     E + +F +M +     ++ T
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT 542

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +L    DA   F  M   G+ P+ V +N+L+      + + +   LF  M 
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + I  ++V +NT++    K     +A  L+  M   G++P+ I+Y+T+I     A ++D
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-ETAITIL 375
            A  L   + S+G++ + V Y T++  Y + G + +A  L  E+ +    P  ET  TIL
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 376 A---RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R+GR  EA  ++     + ++  I  +  +++ F +N  +    ++F+ + S    
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            D     ++++   K    E A DL++ +   G V S
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 224/476 (47%), Gaps = 20/476 (4%)

Query: 73  AISWLQQMEQD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           A+S   +M +D   +V+ D   YS +I    ++       + F  +  +G   D +  N 
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 130 MINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA---LSVFAEM 185
           ++      K   EA  +L+ +M E G +   VSY+TLL    +  +  EA   L +  + 
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 186 NEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            + +C  D+ + NI+I+ +   GQ+D A     LF    +MG+ P VV+YNT++    +A
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYS---LFL---EMGVSPDVVTYNTIIDGLCKA 238

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +    A  +F+ M  K ++ N VTYNT+I    K+ E + A  + Q+M ++G++P+ +TY
Sbjct: 239 QEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTY 298

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +TII    KA  +DRA  +FQ++   GV+ D V Y T+I    +   +  A+ +  ++  
Sbjct: 299 NTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID 358

Query: 363 PNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               P     TI    L +A  ++ A  VF+Q  D G   +   + C+I  +    ++  
Sbjct: 359 KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEE 418

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           V++  ++M +    PD     L+L+   K  +   A  L+  M  +G   S  ++  ML 
Sbjct: 419 VVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLH 478

Query: 479 LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            YG +   + +  L   + ++       + + V   Y +   +++   I  +M ++
Sbjct: 479 GYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 207/468 (44%), Gaps = 4/468 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF Y ++L  + +  +   A  LFD M ++GI P    Y  ++  +GK+G        
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M  + +S +  +++ +I    K +   + + IF ++K  G+ P++V Y T+I+   K
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A L   +M  +GV P+ V +++L+       K+ +   +F EM       D+  
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +     +A RL  SM  MG+ P V+SYNTL+  +  A    EA+ L   M 
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N+V+YNT++  Y K+   + A  L +EM  +G+ P   TY+TI+    ++G+  
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  S        Y  ++  + +      A ++   L     Q + I     I
Sbjct: 733 EARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR E+A  +F      G V  +  +  + E          +  +F  M  +G  
Sbjct: 793 DGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTA 852

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           P+SH++  ++       E   A    S++ E+           ++SL+
Sbjct: 853 PNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLF 900



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 206/451 (45%), Gaps = 46/451 (10%)

Query: 23  NVVLRNVLRAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM- 80
           N +L+ +   K+  E  H L  +M + G      +Y+TL+         + A   L  M 
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV 182

Query: 81  --EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
             +    S D+V Y+ +I          KA S+F  +   G+ PD+V YNT+I+   KA+
Sbjct: 183 DGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQ 239

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A  + ++M E+GVKP+ V+Y+T+++   +                           
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQ------------------------- 274

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
                  ++DMA+    +F  M   G+ PS V+YNT++    +A+    A  +F+ M  +
Sbjct: 275 -------EVDMAEG---VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR 324

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            ++ + VTYNT+I    K+   +KA  + Q+M ++G++P+ +TY+ II    KA  +DRA
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITI 374
             +FQ++   GV+ +   Y  +I  Y   G    +V   K +     +P+       +  
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + G+  EA  +F      G    ++++G M+  + +    + + ++   M + G  P+
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             I   V+ +Y K    +    ++ +M+++G
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 171/378 (45%), Gaps = 41/378 (10%)

Query: 16  SPSVFAYN-VVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           SP+   +N V+     RA   E+ H +F +M+Q+G++P+  TY TLI    K G  D A+
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMH-IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               QM  + V+ + V++++L+     +  + K   +F  + + GI PD+V +NT++   
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EAR LI+ M   G+KPD +SY+TL    ++ H F       + M+E       
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTL----IDGHCFA------SRMDE------- 663

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                             A +L   M   G+ P++VSYNTLL  Y +A     A  LFR 
Sbjct: 664 ------------------AVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFRE 705

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RK +   V TYNT++    +S    +A  L   M       +  TYS I+  + K   
Sbjct: 706 MLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNC 765

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            D A  +FQ L S  +++D + +  MI    + G    A  L   +     +P      +
Sbjct: 766 FDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825

Query: 375 LA----RAGRIEEATWVF 388
           +A      G +EE   +F
Sbjct: 826 IAENLIEEGSLEELDCLF 843



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 1/184 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +LD +   A   P++ +YN +L    +A + + A+ LF EM ++G+ P   TY+T++
Sbjct: 664 AVKLLDGM-VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G F  A      M + R    +  YS +++   K + + +A  IF  L S  + 
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D++ +N MI+   K    ++A  L   +   G+ P  V+Y  +    +E     E   +
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842

Query: 182 FAEM 185
           F+ M
Sbjct: 843 FSVM 846


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 227/467 (48%), Gaps = 19/467 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V+ YNV++R V+     E   G   +M + GI+P+  TY+TLI    K+     A++
Sbjct: 204 SPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMA 263

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M    V+ +L+ Y+++I         S+   +   ++  G+VPD V YNT++N F 
Sbjct: 264 LLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFC 323

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +  +L+ EM  +G+ P+ V+Y+TL+N   +      A+ +F +M       +  
Sbjct: 324 KEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNER 383

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +ID + Q  +  +A ++   M   G  PSVV+YN L+  Y       EA+ + R M
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  +VV+Y+T+I  + +  E  KA  + +EM  +G+ P+ +TYS++I       KL
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             A  LF+++   G+  D V Y ++I AY   G ++ A RL  E+ Q    P+ +     
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN--KKYANVIE-------- 421
           I  L +  R + A  +  + F    V D   +  +IE  S N  K    +++        
Sbjct: 564 INGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLM 623

Query: 422 -----VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
                VF+ M    + P++ I  L+++ + +      A +LY E++ 
Sbjct: 624 NEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEH 670



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 208/494 (42%), Gaps = 47/494 (9%)

Query: 6   LDWINEEARYSPSVFAYN---VVLRNVLRAKQWELAHGLFDEMRQRGIAPD-------RY 55
           L W   +A+     F  +   + L  ++R K +  AH L  ++      PD       R+
Sbjct: 60  LTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTAHSLAADLA--ATLPDPTGASLFRH 117

Query: 56  TYSTLITC---FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
            + T   C   F    +FD  +  L                       +L    KA+++ 
Sbjct: 118 LHDTFHLCSSPFSSSAVFDLVVKSLS----------------------RLGFVPKALTLL 155

Query: 113 SRLKSSGIVPDLVAYNTMINVF-----GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
                 G  P +++YN +++          + + +A  +  +M   GV P+  +Y+ ++ 
Sbjct: 156 HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIR 215

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
             V      + L    +M +     ++ T N +ID   +    K+A  L  +M   G+  
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +++SYN+++          E   L   M+ K +  + VTYNT++  + K     +   L+
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM  +G+ PN +TY+T+I    KAG L RA  +F ++R  G+  +   Y T+I  + + 
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395

Query: 348 GLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           GL+  A ++L E+      P+ +     +      GR++EA  + R   + G   D+  +
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I  F R ++     ++ E+M   G  PD+   + ++      ++   A DL+ EM  
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515

Query: 464 EGCVFSDQVHFQML 477
            G +  D+V +  L
Sbjct: 516 RG-LPPDEVTYTSL 528



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 155/343 (45%), Gaps = 21/343 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SPSV  YN ++       + + A G+   M +RG+ PD  +YST+I  F +E     A 
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              ++M +  V  D V YS+LI+   L +KL +   A  +F  +   G+ PD V Y ++I
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE---AFDLFREMMRRGLPPDEVTYTSLI 529

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNC 190
           N +       +A  L +EM ++G  PD V+YS L+N   +  +   A  +  ++  E + 
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 191 PLDLT------TCN--------IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           P D+T       C+         ++  +    +  +ADR+F +M +    P+   YN ++
Sbjct: 590 PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             +       +A +L+  ++      + V    ++K   +   +++ + L+Q +      
Sbjct: 650 HGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRL 709

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            +A     ++ +  K G +D    +  ++   G+  D  ++ +
Sbjct: 710 NDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 228/470 (48%), Gaps = 6/470 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYST 59
           R++ I + +NE    SPS+  YNV+L    +  + W+    L DEMR RG+  D +T ST
Sbjct: 240 RAIEIFERMNESG-LSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCST 298

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           +++  G+EG+ D A  +   ++ +      V Y+ L+ +  K   +S+A+S+ S ++ + 
Sbjct: 299 VLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENN 358

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD V YN ++  + +A   +E  ++I+ M  +G+ P+ V+Y+T++N Y       +AL
Sbjct: 359 CPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKAL 418

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F +M E+ C  ++ T N ++ + G+  ++++  ++   M+  G  P+ +++NT+L + 
Sbjct: 419 EMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMC 478

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+  +      +FR M+    E +  T+NT+I  YG+   +  A  + +EM   G  P  
Sbjct: 479 GKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCI 538

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+ ++    + G    A  +   +R+ G       Y  M+ +Y + G V   + +   
Sbjct: 539 NTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKS 598

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKK 415
           +   +  P    +  L  A     +     +AF A    G   D+ +   M+ +F++N  
Sbjct: 599 IYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNM 658

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           Y    E+   +  AG  PD      +++ Y +  +   A+++   +Q  G
Sbjct: 659 YDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSG 708



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 237/522 (45%), Gaps = 5/522 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-MFDSA 73
           Y   V AY  +L    R  ++  A  +F+ M + G++P   TY+ ++  +GK G  +D  
Sbjct: 218 YVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKI 277

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +  L +M    +  D    S ++    +     +A   FS LKS G  P  V YN +++V
Sbjct: 278 LELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHV 337

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           FGKA +F EA  ++ EM E    PD V+Y+ ++  YV      E   V   M       +
Sbjct: 338 FGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPN 397

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +I+ YG++     A  +F  M ++G  P+V +YN +L + G+  L  E + +  
Sbjct: 398 AVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILG 457

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+      N +T+NTM+ + GK   H+    + +EM+N G EP+  T++T+I+ +G+ G
Sbjct: 458 HMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCG 517

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
             + AA + +++  +G       Y  ++ A  R G    A+ ++ ++R     P ET+ +
Sbjct: 518 SNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYS 577

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           ++    A+ G ++    + +  +D        +   ++    + +    +   F+ ++  
Sbjct: 578 LMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKH 637

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           GY PD  +   +L+ + K   ++ A ++   + + G       H  ++ +Y    D    
Sbjct: 638 GYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKA 697

Query: 490 ESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           E +   L +         ++ V   + R   + +  RI++ M
Sbjct: 698 EEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 241/515 (46%), Gaps = 9/515 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A  +++R + R  Q  +A  LFD +       D   Y+T++  + + G +  AI   ++M
Sbjct: 189 AIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERM 248

Query: 81  EQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
            +  +S  LV Y+ ++++  K+   + K + +   ++S G+  D    +T+++  G+  L
Sbjct: 249 NESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGL 308

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EAR     ++ +G KP TV+Y+ LL+++ +   F EALSV +EM E NCP D  T N 
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  Y +    ++   +  +M   GI P+ V+Y T++  YG      +A+ +F  M    
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              NV TYN ++ + GK    E+   ++  M+  G  PN IT++T++A+ GK G      
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP----RETAITIL 375
            +F+++++ G E D   + T+I AY R G    A ++  E+ +    P        +  L
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           AR G  + A  V     + G     + +  M+  +++      +  + + +     FP  
Sbjct: 549 ARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSW 608

Query: 436 HII-ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
            ++  LVL ++ K R     +  +  +Q+ G      +   MLS++     ++    +  
Sbjct: 609 MLLRTLVLANF-KCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEML- 666

Query: 495 RLDSDSNINKKEL-HHVVAGIYERANRLNDASRIM 528
           RL  D+ +    + H+ +  +Y R      A  ++
Sbjct: 667 RLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVL 701



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/407 (21%), Positives = 179/407 (43%), Gaps = 39/407 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++    R    + A  +FD+M + G  P+  TY+ ++   GK+ + +  +  
Sbjct: 396 PNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKI 455

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M+ +  S + + ++ ++ +  K   +     +F  +K+ G  PD   +NT+I+ +G+
Sbjct: 456 LGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGR 515

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  + EEM + G  P   +Y+ LLN       +  A SV  +M         T+
Sbjct: 516 CGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETS 575

Query: 197 CNIMIDVYGQLDMAK----------DAD-------------------------RLFWSMR 221
            ++M+  Y +    K          D D                         R F +++
Sbjct: 576 YSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQ 635

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G  P +V  N++L ++ +  ++  A  + RL+    ++ ++VT+N+++ +Y +  +  
Sbjct: 636 KHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCW 695

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  +++ +Q  G +P+ ++Y+T+I  + + G +     +  ++ S GV      Y T I
Sbjct: 696 KAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFI 755

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEA 384
             Y   G+      ++  +   N  P E    I+A    +A R +EA
Sbjct: 756 SGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEA 802



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 135/285 (47%), Gaps = 8/285 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A +SP +  YN +L  + R   W+ A  +  +MR +G  P   +YS ++  + K G   
Sbjct: 531 KAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGG--- 587

Query: 72  SAISWLQQMEQDRVSGDL----VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
             +  ++ +E+    GD+    +L   L+    K    +     F  L+  G  PDLV  
Sbjct: 588 -NVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLC 646

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N+M+++F K  ++  A  ++  + + G++PD V++++L+++Y       +A  V   +  
Sbjct: 647 NSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQT 706

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                DL + N +I  + +  + ++  R+   M  +G+ P + +YNT +  Y    +F E
Sbjct: 707 SGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTE 766

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
              +   M       N +TY  +   Y K+  +++A + + ++++
Sbjct: 767 INDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 35/346 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   +N +L    +    +  + +F EM+  G  PDR T++TLI+ +G+ G  + A  
Sbjct: 465 SPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAK 524

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M +   S  +  Y+ L+    +  D+  A S+   +++ G  P   +Y+ M++ + 
Sbjct: 525 MHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYA 584

Query: 136 KA----------------KLFKEARLL-------------------IEEMREQGVKPDTV 160
           K                  +F    LL                    + +++ G KPD V
Sbjct: 585 KGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLV 644

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             +++L+++ +N+ +  A  +   +++     DL T N ++D+Y +      A+ +   +
Sbjct: 645 LCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRML 704

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G  P +VSYNT+++ +    L  E I +   M    +   + TYNT I  Y      
Sbjct: 705 QTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMF 764

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
            +  +++  M      PN +TY  +   + KA + D A     K++
Sbjct: 765 TEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIK 810



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 218 WSMRKMGIDPSVVSYNT---LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           WS+  +GI    +  +    ++R+ G       A  LF ++   +   +V  Y T++  Y
Sbjct: 173 WSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAY 232

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK-LDRAAMLFQKLRSSGVEID 333
            ++ ++ +A  + + M   G+ P+ +TY+ ++ ++GK G+  D+   L  ++RS G++ D
Sbjct: 233 SRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFD 292

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFR 389
                T++ A  R GL+  A+     L+    +P T+     + +  +AG   EA  V  
Sbjct: 293 EFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLS 352

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  +     D   +  ++  + R   +     V + M S G  P++     ++N+YG++ 
Sbjct: 353 EMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVG 412

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           + + A +++ +M E GCV +   +  +L + G +
Sbjct: 413 DIDKALEMFDQMMELGCVPNVATYNAVLGMLGKK 446



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 83/175 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P +   N +L    +   ++ AH +   +   G+ PD  T+++L+  + + G    A 
Sbjct: 639 YKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAE 698

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ ++      DLV Y+ +I+   +     + I I S + S G+ P +  YNT I+ +
Sbjct: 699 EVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGY 758

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
               +F E   +I  M     +P+ ++Y  + + Y +  ++ EA+   +++ +V+
Sbjct: 759 AAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDVD 813


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 256/531 (48%), Gaps = 22/531 (4%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W   EA  Y P V  + +++  + +A+ ++ A   FD MR++GI P+ +TY+TLI    +
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  + A+  L  ME   V      Y   I+   K  +  KA+  F ++K+ GIVP++VA
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            N  +    +    +EA+ +   +RE G+ PD+V+Y+ ++  Y +  +  EA+++ +EM 
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              C  D+   N +ID   +     +A ++F  M+ M + P+VV+YNTLL   G+     
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +AI LF  M  K+   N +++NT++  + K+ E E A  +  +M     +P+ +TY+T+I
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH----AKRLLHELR- 361
               K  K++ A   F +L+ S +  D V   T++    + G +      A+  ++++R 
Sbjct: 655 YGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           + N    E  +        +++A     +    G  ++ S    ++ +  ++K+     +
Sbjct: 714 RVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 422 VFEKMRSAGYFPDSHIIALVLNSY----GKLREF---ETADDLYSEMQEEGCVFSDQVHF 474
           +F+K      F     I+  L SY    G+L E    E A DL+ +M+  GC   D   F
Sbjct: 774 IFDK------FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA-PDAFTF 826

Query: 475 QM-LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
            M L+++G       L  L++ + S         +++V     ++N L+ A
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 219/462 (47%), Gaps = 10/462 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A +  + ++YN ++  ++++     A  ++  M   G+ P   TYS L+   GK+   +
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  L++ME   +  ++  ++  I +  +     +A  IF R+   G  PDLV Y  +I
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A   + A+ L  +M+  G KPD V Y TLL+ + +          +++M      
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWS---MRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            D+ T  I++DV   L  A+D D  F +   MRK GI P++ +YNTL+     A    +A
Sbjct: 365 PDVVTFTILVDV---LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + L   M+   ++    TY T I  +GKS E  KA    ++M+ +GI PN +  +  +  
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
             + G+L  A  +F  LR +G+  D V Y  M+  Y +VG V  A  LL E+     +P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I   + I  L +AGR++EA  +F +  D      +  +  ++    +  +    IE+FE
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            M      P++     +L+ + K  E E A  ++S+M    C
Sbjct: 602 SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 201/436 (46%), Gaps = 5/436 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V+ + + +R + RA + + A+ +F  M   G  PD  TY+ LI      G  
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           ++A     +M+ +    D V+Y  L++      D       +S++++ G +PD+V +  +
Sbjct: 314 ENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTIL 373

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++V  KA+ F EA    + MR+QG+ P+  +Y+TL+   +   +  +AL +   M  V  
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGV 433

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T    ID +G+      A   F  M+  GI P++V+ N  L    E     EA  
Sbjct: 434 QPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  ++   +  + VTYN M+K Y K  + ++A NL+ EM   G EP+ I  +++I    
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           KAG++D A  +F +++   +    V Y T++    + G V  A  L   +      PNTI
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T +    +   +E A  +F +        D+  +  +I    +  K  +    F ++
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 427 RSAGYFPDSHIIALVL 442
           + + + PD   I  +L
Sbjct: 674 KKSMH-PDHVTICTLL 688



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 219/500 (43%), Gaps = 58/500 (11%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V   N ++ ++ +A + + A  +FD M+   ++P   TY+TL++  GKEG    AI  
Sbjct: 540  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M   + S + + ++ L++   K  +   A+ +FS++      PD++ YNT+I    K
Sbjct: 600  FESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS---------------- 180
                  A     +++ + + PD V+  TLL   V+  +  +A+S                
Sbjct: 660  ENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718

Query: 181  -------------------VFAEMNEVN--C-------PLDLTTCNIMIDVYGQLDMAKD 212
                               +FAE   +N  C       PL    C    ++Y        
Sbjct: 719  FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELY-------- 770

Query: 213  ADRLFWSM-RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A ++F    +K+GI P++ SYN L+    E     +A  LF+ M+      +  T+N ++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 272  KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             ++GKS +  +   L +EM +R  +P+AITY+ +I+   K+  LD+A   F  L SS   
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 332  IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
              P  Y  +I    +VG +  A RL  E+      P      IL     + G  E A  +
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            F++  + G   D+  +  +++      +    +  F +++S G  PD      ++N  GK
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 448  LREFETADDLYSEMQEEGCV 467
             +  E A  LY+EM+  G V
Sbjct: 1011 SQRMEEALALYNEMRNRGIV 1030



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 222/489 (45%), Gaps = 13/489 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ A N  L ++    +   A  +F+ +R+ G+APD  TY+ ++ C+ K G  D A++ 
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M ++    D+++ ++LI+   K     +A  +F R+K   + P +V YNT+++  GK
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  L E M  +   P+T+S++TLL+ + +N +   AL +F++M  ++C  D+ T
Sbjct: 590 EGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKM--GIDPSVVSYNTLLRVYGEAELFGEAIHLFR- 253
            N +I  YG +   K  +  FW   ++   + P  V+  TLL    +    G+AI + R 
Sbjct: 650 YNTVI--YGLIKENK-VNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +     N   +  ++       E +KA    +E+   GI         ++ +  K  
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHK 766

Query: 314 KLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +   A  +F K  +  + I P L  Y  +I     V     A  L  +++     P    
Sbjct: 767 RELYAYQIFDKF-TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             +L     ++G+I E   ++++        D   +  +I   +++      ++ F  + 
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           S+ + P       +++   K+   E A  L+ EM + GC  +  +   +++ YG   D  
Sbjct: 886 SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 488 MLESLFERL 496
               LF+R+
Sbjct: 946 TACQLFKRM 954



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 156/326 (47%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            I D   ++   SP++ +YN ++  +L     E A  LF +M+  G APD +T++ L+   
Sbjct: 774  IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            GK G         ++M   R   D + Y+ +I    K ++  KA+  F  L SS   P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              Y  +I+   K    +EA  L EEM + G KP+   ++ L+N Y +      A  +F  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            M       DL +  I++D         +A   F  ++  G+DP  ++YN ++   G+++ 
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              EA+ L+  M+ + I  ++ TYN+++   G +   E+A  + +E+Q  G+EP+  TY+ 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 305  IIAIWGKAGKLDRAAMLFQKLRSSGV 330
            +I  +  +   + A  +++ +   G 
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGC 1099



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 203/468 (43%), Gaps = 42/468 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
            P V  YN V+  +++  +   A   F +++ + + PD  T  TL+    K G    AIS 
Sbjct: 645  PDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISI 703

Query: 76   ----------------W-------LQQMEQDRV---SGDLVLY------SNLIELARKLS 103
                            W       L + E D+    + +LVL       S LI L R L 
Sbjct: 704  ARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763

Query: 104  DYSK---AISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + +   A  IF +  K  GI P L +YN +I    +    ++A  L ++M+  G  PD 
Sbjct: 764  KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 160  VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             +++ LL ++ ++ K  E   ++ EM    C  D  T NI+I    + +    A   F+ 
Sbjct: 824  FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883

Query: 220  MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            +      P+  +Y  L+    +     EA+ LF  M     + N   +N +I  YGK  +
Sbjct: 884  LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             E A  L + M N GI P+  +Y+ ++     AG++D A   F +L+S+G++ D + Y  
Sbjct: 944  TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003

Query: 340  MIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAG 395
            +I    +   +  A  L +E+R    +P      + +  L  AG +E+A  ++ +   AG
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 396  EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
               D+  +  +I  +S ++   +   V++ M   G  P+    A + N
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 216/495 (43%), Gaps = 40/495 (8%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            ++ + SP+V  YN +L  + +  + + A  LF+ M  +  +P+  +++TL+ CF K    
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS---------GIV 121
            + A+    +M       D++ Y+ +I    K +  + A   F +LK S          ++
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 122  PDLVAYNTMINVFGKAKLF--------------------------KEARLLIEEMREQGV 155
            P LV    + +    A+ F                           +A +  EE+   G+
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 156  KPDTVSYSTLLNLYVENHKFVEALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              +      L+ +  ++ + + A  +F +  + +     L + N +I    ++   + A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 215  RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             LF  M+ +G  P   ++N LL V+G++    E   L++ M  +  + + +TYN +I   
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 275  GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             KS   +KA +   ++ +    P   TY  +I    K G+L+ A  LF+++   G + + 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 335  VLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
             ++  +I  Y ++G    A    KR+++E  +P+       +  L  AGR++EA + F +
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 391  AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                G   D   +  +I    ++++    + ++ +MR+ G  PD +    ++ + G    
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 451  FETADDLYSEMQEEG 465
             E A  +Y E+Q  G
Sbjct: 1049 VEQAKRMYEELQLAG 1063



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 120/254 (47%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            R  P    YN+V+ ++ ++   + A   F ++      P   TY  LI    K G  + A
Sbjct: 853  RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            +   ++M       +  +++ LI    K+ D   A  +F R+ + GI PDL +Y  +++ 
Sbjct: 913  MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
               A    EA     E++  G+ PD ++Y+ ++N   ++ +  EAL+++ EM       D
Sbjct: 973  LCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            L T N ++   G   M + A R++  ++  G++P V +YN L+R Y  +E    A  +++
Sbjct: 1033 LYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYK 1092

Query: 254  LMQRKEIEQNVVTY 267
             M       N+ TY
Sbjct: 1093 NMMVDGCNPNIGTY 1106



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 196/447 (43%), Gaps = 16/447 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++E  R         ++F  ++   I  DL  Y T+          ++   ++ +MR+ G
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              +  SY+ L++L +++    EAL V+  M        L T + ++   G+   ++   
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   M  +G+ P+V ++   +RV G A    EA  +FR M  +    ++VTY  +I   
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             + + E A  L  +M+  G +P+ + Y T++  +   G LD     + ++ + G   D 
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQ 390
           V +  ++    +      A      +R+   +P      T I  L RAGRIE+A  +   
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----- 445
               G       +   I+ F ++ +    +E FEKM++ G  P+  I+A   + Y     
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN--IVACNASLYSLAEM 485

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF-ERLDSDSNINK 504
           G+LRE +T   +++ ++E G       +  M+  Y      +   +L  E + +    + 
Sbjct: 486 GRLREAKT---MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 505 KELHHVVAGIYERANRLNDASRIMNRM 531
             ++ ++  +Y +A R+++A ++ +RM
Sbjct: 543 IVVNSLIDSLY-KAGRVDEAWQMFDRM 568



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 44/398 (11%)

Query: 176 VEALSVFAEMNEVNCPLDLT-TCNIMIDVYGQLDMAKDADRLFW---------------- 218
           + ALS F  ++E    L  T TCN M++     D  +D   +F                 
Sbjct: 103 IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLT 162

Query: 219 -------------------SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
                               MRK G   +  SYN L+ +  ++   GEA+ ++R M  + 
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           ++ ++ TY+ ++   GK  + E    L++EM++ G+ PN  T++  I + G+AGK+D A 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-ITILAR- 377
            +F+++   G   D V Y  +I A    G + +AK L  +++     P +   IT+L + 
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 378 --AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              G ++     + Q    G + D+  F  ++++  + + +      F+ MR  G  P+ 
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           H    ++    +    E A  L   M+  G   +   +   +  +G   +       FE+
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462

Query: 496 LDSDSNINKKELHHVVAGIYERA--NRLNDASRIMNRM 531
           + +   +    +    A +Y  A   RL +A  + N +
Sbjct: 463 MKAKGIV--PNIVACNASLYSLAEMGRLREAKTMFNGL 498



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/304 (19%), Positives = 125/304 (41%), Gaps = 42/304 (13%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
            LRV+ + E   +   +F  MQ+K I +++ TY T+ K         + T ++ +M+  G
Sbjct: 131 FLRVHDKVE---DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
              NA +Y+ +I +  ++G    A  +++++ S G++     Y  ++VA  +        
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            LL E+     +PN       I +L RAG+I+EA                          
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA-------------------------- 281

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                     E+F +M   G  PD     +++++     + E A +L+ +M+  G     
Sbjct: 282 ---------YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            ++  +L  +    D +  +  + ++++D  +       ++  +  +A   ++A    + 
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 531 MNKR 534
           M K+
Sbjct: 393 MRKQ 396


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 226/465 (48%), Gaps = 7/465 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V++ N+++  + R      A  +  +M + GI PD  T++TLI     EG    A+   
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M +     D++ YS +I    K  + S A+ +  +++  G  P+LVAY T+I+   K 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  +A  L+ EM ++G+ PD V+YST+L+ +       EA  +F EM   N   +  T 
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I++D   +  M  +A  +F +M K G +P+  +YN L+  Y       EA  +  +M  
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K     V +YN +I  Y K    ++A +L+ EM  + + P+ +TYST++    + G+   
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  LF+++ SSG+  D + Y T++    + G +  A +LL  +++    P      IL  
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485

Query: 378 ----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
               AG++E A  +F + F  G    I  +  MI+   +        E+F KM   G+ P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQML 477
           +S    +++  + + ++  TA  L  EM   G  FS D   FQML
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMV--GKRFSADSSTFQML 588



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 212/431 (49%), Gaps = 4/431 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N ++       + + A GLF+EM +RG  PD  +YST+I    K G    A+  
Sbjct: 160 PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQL 219

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     +LV Y+ +I+   K +  + A+ + S +   GI PD+V Y+T+++ F  
Sbjct: 220 LRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCS 279

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA +L  EM  + V P+TV+++ L++   +     EA  VF  M +     +  T
Sbjct: 280 LGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D Y   +   +A ++   M   G  P V SYN L+  Y +     EA  L   M 
Sbjct: 340 YNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMS 399

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            KE+  + VTY+T+++   +    ++A NL +EM + G+ P+ +TYST++    K G LD
Sbjct: 400 EKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + ++ S +E D VLY  +I      G +  AK L  +L     QP        I
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G  +EA  +FR+  D G + +   +  +I+ F +N+  +  I + ++M    + 
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFS 579

Query: 433 PDSHIIALVLN 443
            DS    ++L+
Sbjct: 580 ADSSTFQMLLD 590



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 196/420 (46%), Gaps = 8/420 (1%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P    +   +    K+  + + +S   QM+   V+ ++   + LI    +L+    AIS+
Sbjct: 90  PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
             ++   GI PD + +NT+IN        KEA  L  EM  +G +PD +SYST++N   +
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           +     AL +  +M E  C  +L     +ID   +  +  DA  L   M   GI P VV+
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+T+L  +       EA  LF  M  + +  N VT+  ++    K     +A  + + M 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGL 349
            +G EPNA TY+ ++  +    ++D A  +   +   G    PV+  Y  +I  Y +   
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA--PVVHSYNILINGYCKRRR 387

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +  AK LL E+ +    P+T+   T +  L + GR +EA  +F++   +G + D+  +  
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++   ++      +++ + M+ +   PD  +  +++       + E A +L+S++  +G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507


>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 674

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 240/532 (45%), Gaps = 68/532 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P+V +YN V+     AK+ + A G+F EM ++RGI P+ +TY  LI+   K G ++ +++
Sbjct: 107 PNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVN 166

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L+QM Q  ++ + V+YS +I    +   + KA+ +   ++  GI+P  V YNT+I+  G
Sbjct: 167 YLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVISACG 226

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------NLYVENH 173
           K+  +  A  L++EM + G  P  V++++ +                       ++V+ +
Sbjct: 227 KSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKY 286

Query: 174 KFVEALSVFA-------------EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +  A+                 EM+      D+ T ++ I           A++L   M
Sbjct: 287 AYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDM 346

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G+ P+V++Y +L+ V         AI +  LM+ K +  NV TY+  I     + E 
Sbjct: 347 LDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEW 406

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  L++EM+  G+ PN I+Y+T I   G AG+L  A  L  ++ S GV+   V Y T 
Sbjct: 407 RRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTA 466

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRE--------------TAITILARAGRIEEATW 386
           + A +R      A  LL  +R+    P E               A   L  A +IEEA  
Sbjct: 467 VAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQ 526

Query: 387 VFR--QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           +F   QA     V  I  +  +++  +R  ++   I +F++M      P       V+ +
Sbjct: 527 LFNKLQARRNCSVT-IHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRA 585

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             +  +++ A  L  +M+++   F                D  +L+ LF+RL
Sbjct: 586 CERSGQYDVALRLLDDMRKKRMRF---------------YDIGILDELFKRL 622



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 5/261 (1%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-KEIEQNVVTYN 268
           A + ++  W +    ++P+VVSYN ++     A+    A  +FR M + + I  NV TY 
Sbjct: 90  AAEEEKEEWPLAVPAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYG 149

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            +I    K    E + N +++M+  G+ PNA+ YST+I+   ++ +  +A  L + +R  
Sbjct: 150 ALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRD 209

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
           G+    V Y T+I A  + G  + A  LL E+      P  +   +A+    RA +    
Sbjct: 210 GILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHV 269

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  Q  +     D   +   I    +  K+A  +   ++M S G   D   +++ +++
Sbjct: 270 LRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISA 329

Query: 445 YGKLREFETADDLYSEMQEEG 465
                ++  A+ L  +M ++G
Sbjct: 330 CADKGQWAQAEKLLEDMLDDG 350


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 229/489 (46%), Gaps = 39/489 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  F +N +L +++++K +     L  +M  RGI P+    + LI CF + G+   A S
Sbjct: 82  TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141

Query: 76  WLQ-------------------------QMEQ-----DRVSG-----DLVLYSNLIELAR 100
                                       Q++Q     D+V       D + Y  LI    
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K+ +   A+ +  R+  + + P++V YNT+I+   K KL  EA  L  EM  +G+ PD V
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS L++ +    K  +A+ +F +M   N   D+ T NI+++ + +    K+   +F  M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K GI P+ V+YN+L+  Y   +   +A  +F  M +  +  ++ +Y+ MI  + K  + 
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A NL +EM  + I P+ +TYS++I    K+G++  A  L  ++   GV      Y ++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           + A  ++  V  A  LL +L+    QPN       I  L ++G++E+A  VF      G 
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             ++  +  MI+ F     +   + +  KM   G  PD+    +++ S  K  E + A+ 
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 457 LYSEMQEEG 465
           L  EM   G
Sbjct: 562 LLREMIARG 570



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 178/356 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++ ++ + K    A  LF EM  +GI+PD  TYS LI+ F   G  + AI  
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M  + +  D+  ++ L+    K     +  ++F  +   GI P+ V YN++++ +  
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   +A+ +   M + GV PD  SYS ++N + +  KF EA+++F EM+  N   D+ T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID   +      A +L   M   G+ P++ +YN++L    +     +AI L   ++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I+ N+ TY+ +IK   +S + E A  + + +  +G   N  TY+ +I  +   G  +
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            A  L  K+  +G   D   Y+ +I++  +      A++LL E+      PR+ AI
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/478 (20%), Positives = 217/478 (45%), Gaps = 4/478 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LF+ + +R   P  + ++ ++    K   + + +   Q+ME   +  +LV  + LI 
Sbjct: 69  AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              +L     A S+F+++   G VPD + + T+I         ++A L  +++   G   
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D +SY TL++   +  +   AL +   ++      ++   N +ID   ++ +  +A  LF
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   GI P VV+Y+ L+  +       +AI LF  M  + I+ +V T+N ++  + K 
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            + ++   +   M  +GI+PN +TY++++  +    ++++A  +F  +   GV  D   Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFD 393
             MI  + ++     A  L  E+ + N IP      + I  L+++GRI  A  +  Q  D
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G    I  +  +++   +  +    I +  K++  G  P+ +  ++++    +  + E 
Sbjct: 429 RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLED 488

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
           A  ++  +  +G   +   +  M+  +     FN   +L  +++ +  I   + + ++
Sbjct: 489 ARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 159/315 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y+ ++       +   A  LF++M    I PD YT++ L+  F K+G      +
Sbjct: 257 SPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  +  + V Y++L++    + + +KA SIF+ +   G+ PD+ +Y+ MIN F 
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K F EA  L +EM  + + PD V+YS+L++   ++ +   AL +  +M++   P  + 
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   ++     A  L   ++  GI P++ +Y+ L++   ++    +A  +F  +
Sbjct: 437 TYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGL 496

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    NV TY  MI+ +       +A  L+ +M++ G  P+A TY  II    K  + 
Sbjct: 497 LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 316 DRAAMLFQKLRSSGV 330
           D A  L +++ + GV
Sbjct: 557 DMAEKLLREMIARGV 571



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 178/389 (45%), Gaps = 18/389 (4%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           + + YS+        +D   A+S+F+RL      P    +N ++    K+K +     L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VY 204
           ++M  +G+KP+ V+ + L+N + +      A SVFA++ ++    D  T   +I    + 
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 205 GQLDMAKDADRLFW-SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE---I 260
           GQ+  A     LF   +  +G     +SY TL  ++G  ++ GE      L+QR +   +
Sbjct: 169 GQIQQA----FLFHDKVVALGFHFDQISYGTL--IHGLCKV-GETRAALDLLQRVDGNLV 221

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + NVV YNT+I    K     +A +L  EM ++GI P+ +TYS +I+ +   GKL+ A  
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAID 281

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRETAITILA 376
           LF K+    ++ D   +  ++ A+ + G +   K     ++ +  +PN +   + +    
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
               + +A  +F      G   DI  +  MI  F + KK+   + +F++M      PD  
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
             + +++   K      A  L  +M + G
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRG 430



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 109/212 (51%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P + +Y++++    + K+++ A  LF EM ++ I PD  TYS+LI    K G    A+ 
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            + QM    V   +  Y+++++   K+    KAI++ ++LK  GI P++  Y+ +I    
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC 481

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           ++   ++AR + E +  +G   +  +Y+ ++  +     F EAL++ ++M +  C  D  
Sbjct: 482 QSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAK 541

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           T  I+I    + D    A++L   M   G+ P
Sbjct: 542 TYEIIILSLFKKDENDMAEKLLREMIARGVRP 573


>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
 gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 270/598 (45%), Gaps = 70/598 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I +W   +  Y  +V  YN++LR + +A +W     L+DEM ++GI P   TY TL
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 228

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS--- 117
           I  + K G+   A+ WL +M +  +  D V    ++++ +K  ++ KA   F +      
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288

Query: 118 ---SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
              S +      YNTMI+ +GK+   KEA    + M E+G+ P TV+++T++++Y  N +
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             E  S+   M +++C  D  T NI+I ++ + +  + A   F  M+  G+ P  VSY T
Sbjct: 349 LGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407

Query: 235 LL-----------------------------------RVYGEAELFGEAIHLFRLMQRKE 259
           LL                                   R+Y EAE+  ++   F+   R  
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK---RFH 464

Query: 260 IEQNVVT--YNTMIKIYGKS---LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  N+ +  Y+  I  YG+     E E+     QE+  R +    I Y+ +I  +G +  
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKS 520

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
            ++A  LF+ + S GV  D   Y T++       +    +  L ++R+     + IP   
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCA 580

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+   + G++  A  V+++  +     D+ V+G +I  F+        +   E M+ AG
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC-------VFSDQVHFQMLSLYGAR 483
              +S I   ++  Y K+   + A+ +Y ++ +  C       V++      M++LY  R
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNC---MINLYSER 696

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
                 E++F+ +      N+     ++  +Y++  R  +A++I  +M + +     L
Sbjct: 697 SMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEEATQIAKQMREMKILTDPL 753



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 77/492 (15%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + YN ++    ++ Q + A   F  M + GI P   T++T+I  +G  G      S +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+    + D   Y+ LI L  K +D  +A + F  +K  G+ PD V+Y T++  F   
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF---------------------- 175
            + +EA  LI EM +  V+ D  + S L  +YVE                          
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475

Query: 176 ------------VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                        EA  VF    EVN    +   N+MI  YG     + A  LF SM   
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534

Query: 224 GIDPSVVSYNTLLRVYGEAEL--------------------------------FGE---A 248
           G+ P   +YNTL+++   A++                                 G+   A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +++ M    IE +VV Y  +I  +  +   ++A + ++ M+  GI  N++ Y+++I +
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEID-PVLYQT--MIVAYERVGLVAHAKRLLHELRQ--- 362
           + K G LD A  +++KL  S  +   P +Y +  MI  Y    +V  A+ +   ++Q   
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE 714

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N       + +  + GR EEAT + +Q  +   + D   +  ++ LF+ + ++   +E 
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774

Query: 423 FEKMRSAGYFPD 434
           F++M S+G  PD
Sbjct: 775 FKEMVSSGIQPD 786



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 161/313 (51%), Gaps = 6/313 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YNV+++    +K  E A  LF+ M   G+ PD+ TY+TL+       M      +L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M +     D + Y  +I    KL   + A  ++  +    I PD+V Y  +IN F   
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----NEVNCPLD 193
              ++A   +E M+E G+  ++V Y++L+ LY +     EA +++ ++    N+   P D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-D 682

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N MI++Y +  M + A+ +F SM++ G + +  ++  +L +Y +   F EA  + +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+  +I  + ++YN+++ ++      ++A    +EM + GI+P+  T+ ++  I  K G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801

Query: 314 KLDRAAMLFQKLR 326
              +A    +++R
Sbjct: 802 MSKKAVRKIEEIR 814



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 130/256 (50%), Gaps = 4/256 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y      Y  V+ + ++  Q  +A  ++ EM +  I PD   Y  LI  F   G   
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG---IVPDLVAYN 128
            A+S+++ M++  + G+ V+Y++LI+L  K+    +A +I+ +L  S      PD+   N
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MIN++ +  + ++A  + + M+++G + +  +++ +L +Y +N +F EA  +  +M E+
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D  + N ++ ++      K+A   F  M   GI P   ++ +L  +  +  +  +A
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806

Query: 249 IHLFRLMQRKEIEQNV 264
           +     +++KEI++ +
Sbjct: 807 VRKIEEIRKKEIKRGL 822


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 257/531 (48%), Gaps = 22/531 (4%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W   EA  Y P V  + +++  + +A+ ++ A   FD MR++GI P+ +TY+TLI    +
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  + A+  L  ME   V      Y+  I+   K  +  KA+  F ++K+ GIVP++VA
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            N  +    +    +EA+ +   +RE G+ PD+V+Y+ ++  Y +  +  EA+++ +EM 
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              C  D+   N +ID   +     +A ++F  M+ M + P+VV+YNTLL   G+     
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +AI LF  M  K+   N +++NT++  + K+ E E A  +  +M     +P+ +TY+T+I
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH----AKRLLHELR- 361
               K  K++ A   F +L+ S +  D V   T++    + G +      A+  ++++R 
Sbjct: 655 YGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           + N    E  +        +++A     +    G  ++ S    ++ +  ++K+     +
Sbjct: 714 RVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 422 VFEKMRSAGYFPDSHIIALVLNSY----GKLREF---ETADDLYSEMQEEGCVFSDQVHF 474
           +F+K      F     I+  L SY    G+L E    E A DL+ +M+  GC   D   F
Sbjct: 774 IFDK------FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA-PDAFTF 826

Query: 475 QM-LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
            M L+++G       L  L++ + S         +++V     ++N L+ A
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 219/462 (47%), Gaps = 10/462 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A +  + ++YN ++  ++++     A  ++  M   G+ P   TYS L+   GK+   +
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  L++ME   +  ++  ++  I +  +     +A  IF R+   G  PDLV Y  +I
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A   + A+ L  +M+  G KPD V Y TLL+ + +          +++M      
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWS---MRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            D+ T  I++DV   L  A+D D  F +   MRK GI P++ +YNTL+     A    +A
Sbjct: 365 PDVVTFTILVDV---LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + L   M+   ++    TYN  I  +GKS E  KA    ++M+ +GI PN +  +  +  
Sbjct: 422 LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
             + G+L  A  +F  LR +G+  D V Y  M+  Y +VG V  A  LL E+     +P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I   + I  L +AGR++EA  +F +  D      +  +  ++    +  +    IE+FE
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            M      P++     +L+ + K  E E A  ++S+M    C
Sbjct: 602 SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 5/436 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V+ + + +R + RA + + A+ +F  M   G  PD  TY+ LI      G  
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           ++A     +M+ +    D V+Y  L++      D       +S++++ G +PD+V +  +
Sbjct: 314 ENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTIL 373

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++V  KA+ F EA    + MR+QG+ P+  +Y+TL+   +   +  +AL +   M  V  
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGV 433

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T NI ID +G+      A   F  M+  GI P++V+ N  L    E     EA  
Sbjct: 434 QPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  ++   +  + VTYN M+K Y K  + ++A NL+ EM   G EP+ I  +++I    
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           KAG++D A  +F +++   +    V Y T++    + G V  A  L   + +    PNTI
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTI 613

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T +    +   +E A  +F +        D+  +  +I    +  K  +    F ++
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 427 RSAGYFPDSHIIALVL 442
           + + + PD   I  +L
Sbjct: 674 KKSMH-PDHVTICTLL 688



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 220/500 (44%), Gaps = 58/500 (11%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V   N ++ ++ +A + + A  +FD M+   ++P   TY+TL++  GKEG    AI  
Sbjct: 540  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M + + S + + ++ L++   K  +   A+ +FS++      PD++ YNT+I    K
Sbjct: 600  FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS---------------- 180
                  A     +++ + + PD V+  TLL   V+  +  +A+S                
Sbjct: 660  ENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718

Query: 181  -------------------VFAEMNEVN--C-------PLDLTTCNIMIDVYGQLDMAKD 212
                               +FAE   +N  C       PL    C    ++Y        
Sbjct: 719  FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELY-------- 770

Query: 213  ADRLFWSM-RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A ++F    +K+GI P++ SYN L+    E     +A  LF+ M+      +  T+N ++
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 272  KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             ++GKS +  +   L +EM +R  +P+AITY+ +I+   K+  LD+A   F  L SS   
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 332  IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
              P  Y  +I    +VG +  A RL  E+      P      IL     + G  E A  +
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            F++  + G   D+  +  +++      +    +  F +++S G  PD      ++N  GK
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 448  LREFETADDLYSEMQEEGCV 467
             +  E A  LY+EM+  G V
Sbjct: 1011 SQRMEEALALYNEMRNRGIV 1030



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 223/489 (45%), Gaps = 13/489 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ A N  L ++    +   A  +F+ +R+ G+APD  TY+ ++ C+ K G  D A++ 
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M ++    D+++ ++LI+   K     +A  +F R+K   + P +V YNT+++  GK
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  L E M E+   P+T+S++TLL+ + +N +   AL +F++M  ++C  D+ T
Sbjct: 590 EGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKM--GIDPSVVSYNTLLRVYGEAELFGEAIHLFR- 253
            N +I  YG +   K  +  FW   ++   + P  V+  TLL    +    G+AI + R 
Sbjct: 650 YNTVI--YGLIKENK-VNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +     N   +  ++       E +KA    +E+   GI         ++ +  K  
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHK 766

Query: 314 KLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +   A  +F K  +  + I P L  Y  +I     V     A  L  +++     P    
Sbjct: 767 RELYAYQIFDKF-TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             +L     ++G+I E   ++++        D   +  +I   +++      ++ F  + 
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           S+ + P       +++   K+   E A  L+ EM + GC  +  +   +++ YG   D  
Sbjct: 886 SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 488 MLESLFERL 496
               LF+R+
Sbjct: 946 TACQLFKRM 954



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 156/326 (47%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            I D   ++   SP++ +YN ++  +L     E A  LF +M+  G APD +T++ L+   
Sbjct: 774  IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            GK G         ++M   R   D + Y+ +I    K ++  KA+  F  L SS   P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              Y  +I+   K    +EA  L EEM + G KP+   ++ L+N Y +      A  +F  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            M       DL +  I++D         +A   F  ++  G+DP  ++YN ++   G+++ 
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              EA+ L+  M+ + I  ++ TYN+++   G +   E+A  + +E+Q  G+EP+  TY+ 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 305  IIAIWGKAGKLDRAAMLFQKLRSSGV 330
            +I  +  +   + A  +++ +   G 
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGC 1099



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 200/459 (43%), Gaps = 42/459 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
            P V  YN V+  +++  +   A   F +++ + + PD  T  TL+    K G    AIS 
Sbjct: 645  PDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISI 703

Query: 76   ----------------W-------LQQMEQDRV---SGDLVLY------SNLIELARKLS 103
                            W       L + E D+    + +LVL       S LI L R L 
Sbjct: 704  ARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763

Query: 104  DYSK---AISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + +   A  IF +  K  GI P L +YN +I    +    ++A  L ++M+  G  PD 
Sbjct: 764  KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 160  VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             +++ LL ++ ++ K  E   ++ EM    C  D  T NI+I    + +    A   F+ 
Sbjct: 824  FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883

Query: 220  MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            +      P+  +Y  L+    +     EA+ LF  M     + N   +N +I  YGK  +
Sbjct: 884  LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             E A  L + M N GI P+  +Y+ ++     AG++D A   F +L+S+G++ D + Y  
Sbjct: 944  TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003

Query: 340  MIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAG 395
            +I    +   +  A  L +E+R    +P      + +  L  AG +E+A  ++ +   AG
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 396  EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
               D+  +  +I  +S ++   +   V++ M   G  P+
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 217/495 (43%), Gaps = 40/495 (8%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            ++ + SP+V  YN +L  + +  + + A  LF+ M ++  +P+  +++TL+ CF K    
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS---------GIV 121
            + A+    +M       D++ Y+ +I    K +  + A   F +LK S          ++
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 122  PDLVAYNTMINVFGKAKLF--------------------------KEARLLIEEMREQGV 155
            P LV    + +    A+ F                           +A +  EE+   G+
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 156  KPDTVSYSTLLNLYVENHKFVEALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              +      L+ +  ++ + + A  +F +  + +     L + N +I    ++   + A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 215  RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             LF  M+ +G  P   ++N LL V+G++    E   L++ M  +  + + +TYN +I   
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 275  GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             KS   +KA +   ++ +    P   TY  +I    K G+L+ A  LF+++   G + + 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 335  VLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
             ++  +I  Y ++G    A    KR+++E  +P+       +  L  AGR++EA + F +
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 391  AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                G   D   +  +I    ++++    + ++ +MR+ G  PD +    ++ + G    
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 451  FETADDLYSEMQEEG 465
             E A  +Y E+Q  G
Sbjct: 1049 VEQAKRMYEELQLAG 1063



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 120/254 (47%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            R  P    YN+V+ ++ ++   + A   F ++      P   TY  LI    K G  + A
Sbjct: 853  RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            +   ++M       +  +++ LI    K+ D   A  +F R+ + GI PDL +Y  +++ 
Sbjct: 913  MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
               A    EA     E++  G+ PD ++Y+ ++N   ++ +  EAL+++ EM       D
Sbjct: 973  LCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            L T N ++   G   M + A R++  ++  G++P V +YN L+R Y  +E    A  +++
Sbjct: 1033 LYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYK 1092

Query: 254  LMQRKEIEQNVVTY 267
             M       N+ TY
Sbjct: 1093 NMMVDGCNPNIGTY 1106



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 196/447 (43%), Gaps = 16/447 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++E  R         ++F  ++   I  DL  Y T+          ++   ++ +MR+ G
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              +  SY+ L++L +++    EAL V+  M        L T + ++   G+   ++   
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   M  +G+ P+V ++   +RV G A    EA  +FR M  +    ++VTY  +I   
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             + + E A  L  +M+  G +P+ + Y T++  +   G LD     + ++ + G   D 
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQ 390
           V +  ++    +      A      +R+   +P      T I  L RAGRIE+A  +   
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----- 445
               G       +   I+ F ++ +    +E FEKM++ G  P+  I+A   + Y     
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN--IVACNASLYSLAEM 485

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF-ERLDSDSNINK 504
           G+LRE +T   +++ ++E G       +  M+  Y      +   +L  E + +    + 
Sbjct: 486 GRLREAKT---MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 505 KELHHVVAGIYERANRLNDASRIMNRM 531
             ++ ++  +Y +A R+++A ++ +RM
Sbjct: 543 IVVNSLIDSLY-KAGRVDEAWQMFDRM 568



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 40/330 (12%)

Query: 176 VEALSVFAEMNEVNCPLDLT-TCNIMIDVYGQLDMAKDADRLFW---------------- 218
           + ALS F  ++E    L  T TCN M++     D  +D   +F                 
Sbjct: 103 IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLT 162

Query: 219 -------------------SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
                               MRK G   +  SYN L+ +  ++   GEA+ ++R M  + 
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           ++ ++ TY+ ++   GK  + E    L++EM++ G+ PN  T++  I + G+AGK+D A 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-ITILAR- 377
            +F+++   G   D V Y  +I A    G + +AK L  +++     P +   IT+L + 
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 378 --AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              G ++     + Q    G + D+  F  ++++  + + +      F+ MR  G  P+ 
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
           H    ++    +    E A  L   M+  G
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLGTMESVG 432



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/304 (19%), Positives = 125/304 (41%), Gaps = 42/304 (13%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
            LRV+ + E   +   +F  MQ+K I +++ TY T+ K         + T ++ +M+  G
Sbjct: 131 FLRVHDKVE---DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
              NA +Y+ +I +  ++G    A  +++++ S G++     Y  ++VA  +        
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            LL E+     +PN       I +L RAG+I+EA                          
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA-------------------------- 281

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                     E+F +M   G  PD     +++++     + E A +L+ +M+  G     
Sbjct: 282 ---------YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            ++  +L  +    D +  +  + ++++D  +       ++  +  +A   ++A    + 
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 531 MNKR 534
           M K+
Sbjct: 393 MRKQ 396



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AYN ++  + ++++ E A  L++EMR RGI PD YTY++L+   G  GM + A   
Sbjct: 996  PDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             ++++   +  D+  Y+ LI       +   A +++  +   G  P++  Y  + N
Sbjct: 1056 YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 228/486 (46%), Gaps = 9/486 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +++   W  E+A +   VF YN ++  ++  K +   + + +EM + GIAP+ ++++ LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F +    D A++  + M++ R   DL  +  L++   K     KA  +F  + + G V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 122 P-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           P D   +  M+    KAK  KEAR +  +M + G  PD ++Y+T+++   +     EAL 
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V   M    C     T  I+++   +    + A+ LF  M   G  P+ V Y +L+  + 
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           ++    EA  LF  M       +V+T+  MI    KS   E+A    +EM   G +PN +
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII    K G++  A  + + + + G   D V Y  ++  + ++G +  A +LL EL
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 361 RQPNTIPR----ETAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            + ++ P      + +  L   G +E+    +F Q+  A E  D  +   +I    +  +
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE--FETADDLYSEMQEEGCVFSDQVH 473
                 +F++M S G  PD+    +++N   + RE   E A  L  ++++ G    D V 
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG-YLPDAVT 580

Query: 474 FQMLSL 479
           +  L +
Sbjct: 581 YTPLCI 586



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 205/498 (41%), Gaps = 43/498 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+  + P   AYN ++  + +A   + A  + D M  +   P   TY  L+    K G  
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    + M       + V+Y++LI    K     +A S+F  +  +G  PD++ +  M
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K+  F++A    EEM   G KP+ V+Y+T++    +  +   A  +   M    C
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGC 431

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
             D  T   ++D + +L    +A +L   + K    P++  Y++L+    +         
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLD 491

Query: 243 ELF----------------------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +LF                             EA  +F+ M  +  + +  TYN +I   
Sbjct: 492 DLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551

Query: 275 GKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +S E+  E+A  L+ +++  G  P+A+TY+ +     K G++DRA  + ++  S G   
Sbjct: 552 CRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNA 611

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVF 388
           D V Y  +       G V  A  L  E+ +    P   A    I  L +  ++E+A   F
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFF 671

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGK 447
            +    G+   ++ +  +++              FE M + G    S +I   +++ + K
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCK 731

Query: 448 LREFETADDLYSEMQEEG 465
             + + A  L+ +M   G
Sbjct: 732 ALKVDAALKLFEDMISRG 749



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 74/387 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  +++ + +  +   A  +   M   G  PD  TY  L+  F K G  D A   
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457

Query: 77  LQQMEQDRVSGDLVLYSNLI-------ELARKLSDY------------------------ 105
           L ++++   S +L LYS+L+        + + L D                         
Sbjct: 458 LDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC 517

Query: 106 -----SKAISIFSRLKSSGIVPDLVAYNTMIN---------------------------- 132
                 +A  IF R+ S G  PD   YN +IN                            
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577

Query: 133 -------VFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
                    G  K+ +  R   ++EE   +G   D V+Y+ L        +   A+S+F 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM       D      +I+   ++   +DA + F  M   G  P+V +Y  L++    A 
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 244 LFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
              EA H F  ++ R E+  +V+ Y+ +I  + K+L+ + A  L ++M +RG  P A+T 
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +++     ++GK ++A  L Q++ + G
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGG 784



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 3/285 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAISWLQQMEQ 82
           ++  + +  + + A  +F  M   G  PD  TY+ LI   C  +E   + A + L  +E+
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D V Y+ L     K+ +  +A+ +     S G   D+VAY  +            
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L +EM  QG  PD  +Y  ++N  ++  K  +A   F EM        + T   ++ 
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691

Query: 203 VYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
                    +A   F SM   G +  SV+ Y+ L+  + +A     A+ LF  M  +   
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
              VT  ++     +S + EKA  L+QEM   G  P+A T++ I+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 4/238 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ A+L  + E+  Y P    Y  +   + +  + + A  + +E   RG   D   Y+ L
Sbjct: 561 RAFALLHDL-EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            T    +G  D A+S  Q+M +   + D   Y  +I    K+     A   F  +   G 
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ 679

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS-YSTLLNLYVENHKFVEAL 179
            P +  Y  ++     A    EA    E M  +G    +V  Y  L++ + +  K   AL
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAAL 739

Query: 180 SVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            +F +M +  N P  +T+ + + D   +    + A  L   M   G  P   ++  +L
Sbjct: 740 KLFEDMISRGNVPTAVTSAS-LFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/288 (18%), Positives = 112/288 (38%), Gaps = 33/288 (11%)

Query: 246 GEAIHLFRLM-QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           G AI  FR   ++   + +V TYN ++ +      + +   + +EM   GI PN  +++ 
Sbjct: 100 GTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNI 159

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I  + +  + D A   F+ ++       P L+  +I+                      
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRK--RCKPDLHTFLIL---------------------- 195

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVF 423
                  +  L +AG  E+A  VF +    G V  D ++   M+    + K+     EVF
Sbjct: 196 -------VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVF 248

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            +M   G+ PD+     +++   K    + A  +   M  + CV ++  +  +++     
Sbjct: 249 GQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA 308

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
                 E LF  + +        ++  +   + ++ R+ +A  + + M
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 6/150 (4%)

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
           W   QA   G   D+  + C++ L    K Y+    + E+M  AG  P++    +++ S+
Sbjct: 108 WAGEQA---GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERLDSDSNIN 503
            + R  + A   +  M+ + C   D   F +L   L  A  D    E   E +       
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCK-PDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNK 533
            + LH  +     +A R+ +A  +  +M K
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEK 253


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 233/489 (47%), Gaps = 28/489 (5%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  YN ++         + A  L +EM+ + I PD  T++TLI   GKEG   +A  
Sbjct: 235 SPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKI 294

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M +  +  D+V Y++LI+    L+    A  +F  +  SG+ P++  Y TMI+   
Sbjct: 295 VLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLC 354

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  EA  L EEM+ + + PD V+Y++L++   +NH    A+++  +M E     D+ 
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +  I++D   +    ++A   F  +   G   +V +YN ++    +A+LFGEA+ L   M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG--------------------- 294
           + K    + +T+ T+I    +  E++KA  +++EM  RG                     
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 295 --IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
             I+P+ +TY T++  +    +L  A  +F  +   GV  +   Y  MI    +   V  
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  L  E++     PN +   + I  L +   +E A  + ++  + G   D+  +  +++
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              ++ +     E+F+++   GY  +  +   ++N   K   F+ A DL  +M+++GC+ 
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCM- 713

Query: 469 SDQVHFQML 477
            D V F ++
Sbjct: 714 PDAVTFDII 722



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 221/477 (46%), Gaps = 27/477 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+    N +++ +    + + A    D++  +G   ++ +Y TLI    K G   +  
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+++E   V  D+V+Y+ +I    K      A  ++S +   GI P++V YN ++  F
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 KEA  L+ EM+ + + PD  +++TL++   +  K   A  V A M +     D+
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID Y  L+  K+A  +F+SM + G+ P+V +Y T++    + ++  EA+ LF  
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ K +  ++VTY ++I    K+   E+A  L ++M+ +GI+P+  +Y+ ++    K G+
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 428

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L+ A   FQ+L   G  ++   Y  MI    +  L   A  L  ++      P+ I  +T
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488

Query: 371 AITIL-----------------------ARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            I  L                       AR  R++EA  V      A    D+  +G ++
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           + +    +  +   VF  M   G  P+     ++++   K +  + A  L+ EM+ +
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK 605



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 194/433 (44%), Gaps = 58/433 (13%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  I+  +  +A   P V  YN ++       + + A  +F  M Q G+ P+  TY+T+
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    KE M D A+S  ++M+   +  D+V Y++LI+   K     +AI++  ++K  GI
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409

Query: 121 VPDLVA-----------------------------------YNTMINVFGKAKLFKEARL 145
            PD+ +                                   YN MIN   KA LF EA  
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENH-----------------------KFVEALSVF 182
           L  +M  +G  PD +++ T++    E                         +  EA  V 
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           A M +     D+ T   ++D Y  ++  K A  +F+SM +MG+ P+V  Y  ++    + 
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKK 589

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +   EA+ LF  M+ K +  N+VTY ++I    K+   E+A  L++EM+  GI+P+  +Y
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + ++    K+G+L+ A  +FQ+L   G  ++  +Y  MI    + GL   A  L  ++  
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 363 PNTIPRETAITIL 375
              +P      I+
Sbjct: 710 KGCMPDAVTFDII 722



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/498 (23%), Positives = 225/498 (45%), Gaps = 20/498 (4%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           FD M      P  + ++ +++       + + IS  ++ E +  + DL   + L+     
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+  + A S+ + +   G  P+ +  NT+I         K+A    +++  QG + + VS
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +  +      +  ++   +   D+   N +I    +  +  DA  L+  M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P+VV+YN L+  +       EA  L   M+ K I  +V T+NT+I   GK  + +
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  ++  M    I+P+ +TY+++I  +    K+  A  +F  +  SGV  +   Y TMI
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
               +  +V  A  L  E++  N IP      + I  L +   +E A  + ++  + G  
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +++   +  +  N  E F+++   GY  +     +++N   K   F  A DL
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA-GIYE 516
            S+M+ +GC+  D + F+            ++ +LFE+ ++D    +K L  ++A G+ E
Sbjct: 471 KSKMEGKGCM-PDAITFK-----------TIICALFEKDENDK--AEKILREMIARGLQE 516

Query: 517 -RANRLNDASRIMNRMNK 533
            R  RL +A  ++  M K
Sbjct: 517 ARKVRLKEAKIVLAVMTK 534



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 157/353 (44%), Gaps = 24/353 (6%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+   + E+    P V++Y ++L  + +  + E A   F  +  +G   +  TY+ +
Sbjct: 396 RAIALCKKMKEQG-IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI------------------ELARKL 102
           I    K  +F  A+    +ME      D + +  +I                   +AR L
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 103 SDYSK-----AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            +  K     A  + + +  + I PD+V Y T+++ +      K A+ +   M + GV P
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +   Y+ +++   +     EA+S+F EM   N   ++ T   +ID   +    + A  L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M++ GI P V SY  LL    ++     A  +F+ +  K    NV  Y  MI    K+
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
              ++A +L  +M+++G  P+A+T+  II    +  + D+A  +  ++ + G+
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+L  + E     P V++Y ++L  + ++ + E A  +F  +  +G   +   Y+ +
Sbjct: 629 RAIALLKEMKEHG-IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G+FD A+    +ME      D V +  +I    +  +  KA  I   + + G+
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747

Query: 121 V 121
           +
Sbjct: 748 M 748


>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 3/378 (0%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R S   P   AYN +L+  ++    + A  +  EM +RG++PD +TYS LI  +   
Sbjct: 299 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 358

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G ++SA   L++ME   V  +  ++S L+   R   ++ K   +   +KS G+ PD   Y
Sbjct: 359 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 418

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I+ FGK      A    + M  +G++PD V+++TL++ + ++ + + A  +F  M  
Sbjct: 419 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 478

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C    TT NIMI+ YG  +   D  RL   M+  GI P+VV++ TL+ VYG++  F +
Sbjct: 479 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 538

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI     M+   ++ +   YN +I  Y +    E+A N  + M + G++P+ +  +++I 
Sbjct: 539 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 598

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +G+  +   A  + Q ++ +GV+ D V Y T++ A  RV        +  E+      P
Sbjct: 599 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 658

Query: 368 RETAITILARAGRIEEAT 385
              A ++L  A R  + T
Sbjct: 659 DRKARSMLRSALRYMKQT 676



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 210/488 (43%), Gaps = 41/488 (8%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--ISWL 77
             YN ++    R    E A  L  +MRQ G   D   YS +I    +    DS   +   
Sbjct: 169 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 228

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +++E+D++  D+ L +++I    K  D SKA+ +    +++G+        ++I+    +
Sbjct: 229 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 288

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA  L EE+R+ G+KP T +Y+ LL  YV+     +A S+ +EM +     D  T 
Sbjct: 289 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 348

Query: 198 NIMIDVY---GQLDMAKDA------------------------DRLFWS--------MRK 222
           +++ID Y   G+ + A+                          DR  W         M+ 
Sbjct: 349 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 408

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           +G+ P    YN ++  +G+      A+  F  M  + IE + VT+NT+I  + K   H  
Sbjct: 409 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 468

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  + + M+ RG  P A TY+ +I  +G   + D    L  K++S G+  + V + T++ 
Sbjct: 469 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 528

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVK 398
            Y + G    A   L E++     P  T     I   A+ G  E+A   FR     G   
Sbjct: 529 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 588

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +     +I  F  +++ A    V + M+  G  PD      ++ +  ++ +F+    +Y
Sbjct: 589 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 648

Query: 459 SEMQEEGC 466
            EM   GC
Sbjct: 649 EEMIMSGC 656



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 199/457 (43%), Gaps = 48/457 (10%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G+  + +SWLQ+   +      +LYS LI     L    K    F   +   + P  + Y
Sbjct: 119 GLAYAVVSWLQK--HNLCFSYELLYSILIH---ALGRSEKLYEAFLLSQKQTLTP--LTY 171

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF--VEALSVFAEM 185
           N +I    +    ++A  LI +MR+ G + D V+YS ++     ++K   V  L ++ E+
Sbjct: 172 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 231

Query: 186 NEVNCPLDLTTCNIMIDVYGQ----------LDMAK------------------------ 211
                 LD+   N +I  + +          L MA+                        
Sbjct: 232 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 291

Query: 212 -DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
            +A+ LF  +R+ GI P   +YN LL+ Y +     +A  +   M+++ +  +  TY+ +
Sbjct: 292 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 351

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I  Y  +   E A  +++EM+   ++PN+  +S ++A +   G+  +   + ++++S GV
Sbjct: 352 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 411

Query: 331 EIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           + D   Y  +I  + +   + HA     R+L E  +P+ +   T I    + GR   A  
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 471

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +F      G +   + +  MI  +   +++ ++  +  KM+S G  P+      +++ YG
Sbjct: 472 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 531

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           K   F  A +   EM+  G   S  ++  +++ Y  R
Sbjct: 532 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 568



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 191/445 (42%), Gaps = 79/445 (17%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+  G+++   EA LL ++   Q + P  ++Y+ L+     N+   +AL++ A+M 
Sbjct: 141 YSILIHALGRSEKLYEAFLLSQK---QTLTP--LTYNALIGACARNNDIEKALNLIAKMR 195

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +     D    +++I                   R   ID SV+    LLR+Y E E   
Sbjct: 196 QDGYQSDFVNYSLVIQSL---------------TRSNKID-SVM----LLRLYKEIE--- 232

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
                     R ++E +V   N +I  + KS +  KA  L+   Q  G+     T  +II
Sbjct: 233 ----------RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 282

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           +    +G+   A  LF++LR SG++     Y  ++  Y + G +  A+ ++ E+ +    
Sbjct: 283 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 342

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS-VFGCMIELFSRNKKYANVIE 421
           P E   ++L      AGR E A  V ++  +AG+V+  S VF  ++  F    ++    +
Sbjct: 343 PDEHTYSLLIDAYVNAGRWESARIVLKE-MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 401

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFE----------------------------- 452
           V ++M+S G  PD     +V++++GK    +                             
Sbjct: 402 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 461

Query: 453 ------TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
                  A++++  M+  GC+     +  M++ YG ++ ++ ++ L  ++ S   +    
Sbjct: 462 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 521

Query: 507 LHHVVAGIYERANRLNDASRIMNRM 531
            H  +  +Y ++ R NDA   +  M
Sbjct: 522 THTTLVDVYGKSGRFNDAIECLEEM 546


>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 3/378 (0%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R S   P   AYN +L+  ++    + A  +  EM +RG++PD +TYS LI  +   
Sbjct: 330 EELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNA 389

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G ++SA   L++ME   V  +  ++S L+   R   ++ K   +   +KS G+ PD   Y
Sbjct: 390 GRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFY 449

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I+ FGK      A    + M  +G++PD V+++TL++ + ++ + + A  +F  M  
Sbjct: 450 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 509

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C    TT NIMI+ YG  +   D  RL   M+  GI P+VV++ TL+ VYG++  F +
Sbjct: 510 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 569

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI     M+   ++ +   YN +I  Y +    E+A N  + M + G++P+ +  +++I 
Sbjct: 570 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 629

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +G+  +   A  + Q ++ +GV+ D V Y T++ A  RV        +  E+      P
Sbjct: 630 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKP 689

Query: 368 RETAITILARAGRIEEAT 385
              A ++L  A R  + T
Sbjct: 690 DRKARSMLRSALRYMKQT 707



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 206/488 (42%), Gaps = 41/488 (8%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI--SWL 77
             YN ++    R    E A  L   MRQ G   D   YS +I    +    DS +     
Sbjct: 200 LTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLY 259

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAI---------------------------- 109
           +++E+D++  D+ L +++I    K  D S+A+                            
Sbjct: 260 KEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANS 319

Query: 110 -------SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
                  ++F  L+ SGI P   AYN ++  + K    K+A L++ EM ++GV PD  +Y
Sbjct: 320 GRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTY 379

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S L++ YV   ++  A  V  EM   +   +    + ++  Y      +   ++   M+ 
Sbjct: 380 SLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKS 439

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           +G+ P    YN ++  +G+      A+  F  M  + IE + VT+NT+I  + K   H  
Sbjct: 440 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 499

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  + + M+ RG  P A TY+ +I  +G   + D    L  K++S G+  + V + T++ 
Sbjct: 500 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 559

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVK 398
            Y + G    A   L E++     P  T     I   A+ G  E+A   FR     G   
Sbjct: 560 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 619

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +     +I  F  +++ A    V + M+  G  PD      ++ +  ++ +F+    +Y
Sbjct: 620 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVY 679

Query: 459 SEMQEEGC 466
            EM   GC
Sbjct: 680 EEMIMSGC 687



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 192/434 (44%), Gaps = 13/434 (2%)

Query: 57  YSTLITCFGK-EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           YS LI   G+ E ++++ +     + Q +    L  Y+ LI    + +D  KA+++ SR+
Sbjct: 172 YSILIHALGRSEKLYEAFL-----LSQKQTLTPLT-YNALIGACARNNDIEKALNLISRM 225

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVENH 173
           +  G   D V Y+ +I    +        L  L +E+    ++ D    + ++  + ++ 
Sbjct: 226 RQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSG 285

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               AL +              T   +I          +A+ LF  +R+ GI P   +YN
Sbjct: 286 DPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYN 345

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            LL+ Y +     +A  +   M+++ +  +  TY+ +I  Y  +   E A  +++EM+  
Sbjct: 346 ALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETG 405

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            ++PN+  +S ++A +   G+  +   + ++++S GV+ D   Y  +I  + +   + HA
Sbjct: 406 DVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 465

Query: 354 ----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
                R+L E  +P+ +   T I    + GR   A  +F      G +   + +  MI  
Sbjct: 466 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 525

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           +   +++ ++  +  KM+S G  P+      +++ YGK   F  A +   EM+  G   S
Sbjct: 526 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 585

Query: 470 DQVHFQMLSLYGAR 483
             ++  +++ Y  R
Sbjct: 586 STMYNALINAYAQR 599



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/498 (20%), Positives = 199/498 (39%), Gaps = 49/498 (9%)

Query: 42  FDEMRQRGIAPDRYTYS---TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           F+ +      P  Y +S   +L +     G+  + +SWLQ+   +      +LYS LI  
Sbjct: 121 FELVESYSAVPAPYWHSLIKSLCSSTSSLGLAYAVVSWLQK--HNLCFSYELLYSILIH- 177

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
              L    K    F   +   + P  + YN +I    +    ++A  LI  MR+ G + D
Sbjct: 178 --ALGRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLISRMRQDGYQSD 233

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+YS ++                           LT CN +  V  Q        RL+ 
Sbjct: 234 FVNYSLVIQ-------------------------SLTRCNKIDSVMLQ--------RLYK 260

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            + +  ++  V   N ++  + ++     A+ L  + Q   +     T  ++I     S 
Sbjct: 261 EIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSG 320

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A  L +E++  GI+P    Y+ ++  + K G L  A ++  ++   GV  D   Y 
Sbjct: 321 RTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYS 380

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW-----VFRQAFD 393
            +I AY   G    A+ +L E+   +  P     + L  AG  +   W     V ++   
Sbjct: 381 LLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLL-AGYRDRGEWQKTFQVLKEMKS 439

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D   +  +I+ F +     + +  F++M S G  PD      +++ + K      
Sbjct: 440 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 499

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A++++  M+  GC+     +  M++ YG ++ ++ ++ L  ++ S   +     H  +  
Sbjct: 500 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 559

Query: 514 IYERANRLNDASRIMNRM 531
           +Y ++ R NDA   +  M
Sbjct: 560 VYGKSGRFNDAIECLEEM 577


>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like, partial [Cucumis sativus]
          Length = 594

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 211/444 (47%), Gaps = 12/444 (2%)

Query: 50  IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           I P R T++ LI   G  G +  A+   ++M  + V  DLV ++ ++   +  + YSKA+
Sbjct: 1   IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ--GVKPDTVSYSTLLN 167
           S F  +K + I PD    N +I+   K K + +A  +   MRE+    +PD V+++++++
Sbjct: 61  SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           LY    +  +  +VF+ M       ++ + N +I  Y    M K+A  +F  M++ G  P
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
            VVSY +L+  +G ++    A  +F +M+R + + N+V+YN ++  YG +    +A +++
Sbjct: 181 DVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDIL 240

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +EM+  GI PN ++  T++A  G+ G+      +       G+ ++ +   + I +Y  +
Sbjct: 241 REMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNI 300

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A  L   +    T P     TIL     R  + EEA   F++  D        ++
Sbjct: 301 GEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIY 360

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI  +S+  +      +F  ++ +G  PD      ++N+Y     +E    LY EM+ 
Sbjct: 361 SSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEME- 419

Query: 464 EGCVFSDQVHFQMLSLYGARKDFN 487
                ++ +    ++     K FN
Sbjct: 420 -----ANNIQLDSIACSALMKAFN 438



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 239/535 (44%), Gaps = 52/535 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N ++        W  A  +  +M   G+ PD  T++ +++ +     +  A+S+
Sbjct: 3   PSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSY 62

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-------------------- 116
            + M+   +  D    + +I    K+  Y +AI IFS ++                    
Sbjct: 63  FELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLY 122

Query: 117 -----------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
                            + GI P++V+YN +I+ +    + KEA  + +EM+  G  PD 
Sbjct: 123 SVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDV 182

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           VSY++L++ +  + +   A  VF  M    C  +L + N ++D YG       A  +   
Sbjct: 183 VSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILRE 242

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE---IEQNVVTYNTMIKIYGK 276
           M + GI P+VVS  TLL   G    FG+ +++  ++   E   I  N +  N+ I  Y  
Sbjct: 243 MEQDGIHPNVVSICTLLAACGR---FGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMN 299

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
             E+EKA NL + M+N+  +P+++T++ +I+   +  K + A   F+++    + +   +
Sbjct: 300 IGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEI 359

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIP---RETAITILARAGRIEEATWVFRQAFD 393
           Y +MI AY + G +  A+ L + L+     P     TA+     A  + E      Q  +
Sbjct: 360 YSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEME 419

Query: 394 AGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGY-FPDSHIIALVLNSYGKLREF 451
           A  ++ D      +++ F++  + +NV+ + E M+  G  F D++   + L++   LR++
Sbjct: 420 ANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEM-LSACSILRDW 478

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER---LDSDSNIN 503
             A DL + M+    + S      +L   G      ++  LF R   L S  NIN
Sbjct: 479 RKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNIN 533



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 146/307 (47%), Gaps = 6/307 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y  ++    R++Q   A  +FD M++    P+  +Y+ L+  +G  G    A+
Sbjct: 178 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 237

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++MEQD +  ++V    L+    +        S+ S  +  GI  + +A N+ I  +
Sbjct: 238 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSY 297

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +++A  L   M  +  KPD+V+++ L++      K+ EAL  F EM ++  PL  
Sbjct: 298 MNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSS 357

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              + MI  Y +      A+ LF S++  G  P +V+Y  ++  Y  +E++ +   L++ 
Sbjct: 358 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQE 417

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN------AITYSTIIAI 308
           M+   I+ + +  + ++K + K  +      L + M+ +GI  N       ++  +I+  
Sbjct: 418 MEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRD 477

Query: 309 WGKAGKL 315
           W KA  L
Sbjct: 478 WRKATDL 484



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 146/314 (46%), Gaps = 14/314 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +  A N  + + +   ++E A  L+  M  +   PD  T++ LI+   +   ++ A+ + 
Sbjct: 286 NTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFF 345

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M   R+     +YS++I    K     KA S+F+ LK SG  PDLV Y  MIN +  +
Sbjct: 346 KEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSAS 405

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD---- 193
           +++++   L +EM    ++ D+++ S L+  + + ++    L +   M E   P +    
Sbjct: 406 EMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANF 465

Query: 194 ---LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L+ C+I+ D     D+    +  F  +       S+ + N LL+  G++      I 
Sbjct: 466 FEMLSACSILRDWRKATDLINLMEPSFHLV-------SLGTINHLLQFLGKSGKTEIMIK 518

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF          N+ TY+ ++K    + +  K   ++Q M + GI+P+   Y+ I+    
Sbjct: 519 LFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFFAQ 578

Query: 311 KAGKLDRAAMLFQK 324
             G  + AA++ ++
Sbjct: 579 HCGDAEYAAVIKER 592



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 144/343 (41%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V +   +L    R  Q      +      RGI  +    ++ I  +   G +
Sbjct: 244 EQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEY 303

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + AI+  + ME      D V ++ LI    ++S Y +A+  F  +    I      Y++M
Sbjct: 304 EKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSM 363

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  + K     +A  L   ++  G  PD V+Y+ ++N Y  +  + +  +++ EM   N 
Sbjct: 364 ICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNI 423

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD   C+ ++  + + + A +   L   M++ GI  +  ++  +L        + +A  
Sbjct: 424 QLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATD 483

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L  LM+      ++ T N +++  GKS + E    L       G   N  TYS ++    
Sbjct: 484 LINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLL 543

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            AGK  +   + Q +  +G++    +Y  ++   +  G   +A
Sbjct: 544 SAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFFAQHCGDAEYA 586


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 228/489 (46%), Gaps = 39/489 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  F +N +L +++++K +     L  +M  RGI P+    + LI CF + G+   A S
Sbjct: 82  TPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 141

Query: 76  WLQ-------------------------QMEQ-----DRVSG-----DLVLYSNLIELAR 100
                                       Q++Q     D+V       D + Y  LI    
Sbjct: 142 VFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K+ +   A+ +  R+  + + P++V YNT+I+   K KL  EA  L  EM  +G+ PD V
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS L++ +    K  +A+ +F +M   N   D+ T NI+++ + +    K+   +F  M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K GI P+ V+YN+L+  Y   +   +A  +F  M +  +  ++ +Y+ MI  + K  + 
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A NL +EM  + I P+ +TYS++I    K+G++  A  L  ++   GV  +   Y ++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           + A  +   V  A  LL + +    QP+       I  L ++G++E+A  VF      G 
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  +  MI+ F     +   + +  KM   G  PD+    +++ S  K  E + A+ 
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 457 LYSEMQEEG 465
           L  EM   G
Sbjct: 562 LLREMIARG 570



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 158/318 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y+ ++       + + A  LF++M    I PD YT++ L+  F K+G      +
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  +  + V Y++L++    + + +KA SIF+ +   G+ PD+ +Y+ MIN F 
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K F EA  L +EM  + + PD V+YS+L++   ++ +   AL +  +M++   P ++ 
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   +      A  L    +  G  P + +Y+ L++   ++    +A  +F  +
Sbjct: 437 TYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL 496

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    +V  Y  MI+ +       +A  L+ +M++ G  P+A TY  II    K  + 
Sbjct: 497 LVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 316 DRAAMLFQKLRSSGVEID 333
           D A  L +++ + G+ ++
Sbjct: 557 DMAEKLLREMIARGLPLN 574



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/495 (20%), Positives = 210/495 (42%), Gaps = 39/495 (7%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           +YS+  T F      D A+S   ++ +   +     ++ ++    K   Y   + +  ++
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL---------- 165
           +  GI P+LV  N +IN F +  L   A  +  ++ + G  PDT++++TL          
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171

Query: 166 ------------LNLYVENHKFVEALSVFAEMNEVNCPLDL-------------TTCNIM 200
                       L  + +   +   +    ++ E    LDL                N +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID   ++ +  +A  LF  M   GI P VV+Y+ L+  +       +AI LF  M  + I
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + +V T+N ++  + K  + ++   +   M  +GI+PN +TY++++  +    ++++A  
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILA 376
           +F  +   GV  D   Y  MI  + ++     A  L  E+ + N IP      + I  L+
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           ++GRI  A  +  Q  D G   +I  +  +++   +  +    I +  K +  G+ PD  
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             ++++    +  + E A  ++ ++  +G       +  M+  +     FN   +L  ++
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531

Query: 497 DSDSNINKKELHHVV 511
           + +  I   + + ++
Sbjct: 532 EDNGCIPDAKTYEII 546



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L    ++  + P +  Y+++++ + ++ + E A  +F+++  +G   D Y Y+ +
Sbjct: 453 KAIALLTKFKDKG-FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           I  F  EG+F+ A++ L +ME +    D   Y  +I
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547


>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 805

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 225/467 (48%), Gaps = 6/467 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYST 59
           R++ + D +  E   +P+   YNVVL    R  + W     L  +MR  G+ PD +T ST
Sbjct: 201 RALRLFDELRREG-VAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTAST 259

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           +I   G++G+ D A+++ + ++    +  +V Y+ L+++  K  +Y++A+ +   ++ +G
Sbjct: 260 VIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAG 319

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD V YN +   + +A  ++EA   I+ M  +G+ P+T +Y+T++  Y    K  EAL
Sbjct: 320 CKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEAL 379

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           ++F  M +        T N+++ + G+         +   M + G  P+ V++NTLL V 
Sbjct: 380 ALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVC 439

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+  +      +   M+  ++E    TYNT+I  YG+      A  +  EM   G  P  
Sbjct: 440 GKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCL 499

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+ ++ +  + G    A  +  K++S G + + + Y  ++  + + G  A  + +  E
Sbjct: 500 TTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKE 559

Query: 360 LRQPNTIPRETAITILARAG----RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + Q N  P    +  L  A     R+E     F++    G   D+ +   M+ ++++N  
Sbjct: 560 VYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGL 619

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           Y+  +E+FE +   G  PD      +++ Y K  E   A+ + + ++
Sbjct: 620 YSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLR 666



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 40/534 (7%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
            A+LD +         V AY  VL  + R  ++E A  LFDE+R+ G+AP R TY+ ++ 
Sbjct: 167 CALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLD 226

Query: 63  CFGKEG-MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
            +G+ G  +   ++ L  M    V  D    S +I  A +     +A++ F  LK+ G  
Sbjct: 227 VYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHA 286

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P +V YN ++ VFGKA  + EA  ++ EM + G KPD V+Y+ L   Y     + EA   
Sbjct: 287 PCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEA--- 343

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
                                       AK  D    +M   G+ P+  +YNT++  YG 
Sbjct: 344 ----------------------------AKCID----TMIGKGLLPNTFTYNTIMTAYGN 371

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA+ LF  M++        TYN ++ + GK         ++ EM   G  PN +T
Sbjct: 372 AGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVT 431

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T++A+ GK G       + + ++S  VE+    Y T+I AY R G  A+A ++  E+ 
Sbjct: 432 WNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMT 491

Query: 362 QPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P  T     + +L+R G    A  +  +    G   +   +  +++  ++    A
Sbjct: 492 AAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAA 551

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            +  + +++     FP   I+  ++ +  K R  E  +  + E++  G      +   ML
Sbjct: 552 GIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSML 611

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           S+Y     ++    +FE ++          ++ +  +Y ++N   +A +I+NR+
Sbjct: 612 SIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRL 665



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 188/396 (47%), Gaps = 14/396 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+ D + +   + P    YN+VL  + +  ++     +  EM + G  P+R T++TL+
Sbjct: 378 ALALFDRMKKNG-FIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLL 436

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GK GM       L+ M+  +V      Y+ LI    +    + A  ++  + ++G  
Sbjct: 437 AVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFA 496

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P L  YN ++NV  +   +  AR ++ +M+ +G KP+ +SYS LL  + +        ++
Sbjct: 497 PCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 556

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             E+ + N          ++    +    +  +R F  ++  G  P +V  N++L +Y +
Sbjct: 557 EKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAK 616

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ---------N 292
             L+ +A+ +F  +++  +  +++TYN+++ +Y KS E  +A  ++  ++          
Sbjct: 617 NGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQ 676

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           + ++P+ ++Y+T+I  + K G +  A  +  ++ + GV    + Y T++  Y    + A 
Sbjct: 677 QQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAE 736

Query: 353 AKRLLHELRQPNTIPRETA----ITILARAGRIEEA 384
           A+ ++  + Q    P E      +    RA R E+A
Sbjct: 737 AREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDA 772



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 143/287 (49%), Gaps = 15/287 (5%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A ++P +  YN +L  + R   W  A  +  +M+  G  P+  +YS L+ C  K G    
Sbjct: 493 AGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAG 552

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIEL---ARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             +  +++ Q  +    V+   L+      R+L    +A   F  +K+ G  PDLV  N+
Sbjct: 553 IEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERA---FQEVKARGHKPDLVILNS 609

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M++++ K  L+ +A  + E + + G+ PD ++Y++L+++Y ++++  EA  +   +    
Sbjct: 610 MLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQ 669

Query: 190 CPL---------DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                       D+ + N +I+ + +  + K+A R+   M   G+ P V++Y+TL+  Y 
Sbjct: 670 SQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYA 729

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             E+F EA  +   M +++++   +TY  ++  Y ++  +E A + +
Sbjct: 730 SREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFL 776



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 12/307 (3%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYSTII 306
           A+ L R  + +        +  +++  G+   H+    L+ EM    G   +   Y+T++
Sbjct: 131 ALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVL 190

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV-AHAKRLLHELRQPNT 365
               + G+ +RA  LF +LR  GV    V Y  ++  Y R+G        LL ++R    
Sbjct: 191 HALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGV 250

Query: 366 IPRE-TAITILARAGR---IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P   TA T++A AGR   ++EA   F      G    +  +  ++++F +   Y   + 
Sbjct: 251 EPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALR 310

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           V  +M  AG  PD+     +  SY +   ++ A      M  +G + +   +  +++ YG
Sbjct: 311 VLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYG 370

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK------RR 535
                +   +LF+R+  +  I     +++V G+  + +R      ++  M++      R 
Sbjct: 371 NAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRV 430

Query: 536 TFNSSLV 542
           T+N+ L 
Sbjct: 431 TWNTLLA 437



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 105/227 (46%), Gaps = 51/227 (22%)

Query: 11  EEARYSPSVFAYNVVLRNVL----RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           E+  Y  ++F   V+LR ++    + ++ E     F E++ RG  PD    +++++ + K
Sbjct: 557 EKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAK 616

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK---------- 116
            G++  A+   + +EQ  +S DL+ Y++L+++  K ++  +A  I +RL+          
Sbjct: 617 NGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQ 676

Query: 117 ----------------------------------SSGIVPDLVAYNTMINVFGKAKLFKE 142
                                             + G+ P ++ Y+T++  +   ++F E
Sbjct: 677 QQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAE 736

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA---LSVFAEMN 186
           AR ++  M ++ +KP  ++Y  +++ Y    ++ +A   L+V AE +
Sbjct: 737 AREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEAD 783


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 222/466 (47%), Gaps = 6/466 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE      +  YN ++    R      A GL D M  +G+ P  +TY+ LI    KEG +
Sbjct: 251 EEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSY 310

Query: 71  DSAISWLQQMEQDRVSGDLVLYSN-LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           + A   L +M    +  +   ++  L+E  RK  D  +A  +F+ +   G+VPDL+++++
Sbjct: 311 ERAKRVLDEMLGVGLCPNAATFNPMLVESCRK-EDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++ VF +      A    E+M+  G+ PDTV Y+ L+N Y  N     AL +  EM E  
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C +D+ T N +++   +  M  DAD LF  M + G+ P   +  TL+  Y +     +A+
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  M  + ++ +VVTYNT++  + K  E EKA  L  +M +R I P+ I++S +I  +
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNT 365
              G +  A  L+ +++  G++   V   T+I  Y R G ++ A   L+    E   P+ 
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDC 609

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   T I    +    + A ++     + G + ++  +  ++  FSR+ +      V  K
Sbjct: 610 ITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHK 669

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           M   G  PD      ++N Y      + A  ++ EM + G V  D+
Sbjct: 670 MIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 715



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 242/527 (45%), Gaps = 10/527 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +  S+ A N +L  +++    +LA  ++++  + G   + YT + ++    K+G  D+  
Sbjct: 185 FCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVG 244

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L +ME+  V  DLV Y+ L+    +    S+A  +   +   G+ P L  YN +IN  
Sbjct: 245 VYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGL 304

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   ++ A+ +++EM   G+ P+  +++ +L          EA  VF EM +     DL
Sbjct: 305 CKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDL 364

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + + ++ V+ +      A   F  M+ +G+ P  V Y  L+  Y   +    A+ +   
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNE 424

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  +    +VVTYNT++    +    + A  L +EM  RG+ P+  T +T+I  + K G 
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           + +A  LF+ +    ++ D V Y T++  + +VG +  AK L +++      P   + +I
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L       G + EA  ++ +  + G    +     +I+ + R    +   +    M S G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD      ++NS+ K   F+ A  L + M+E G +  + V +  + L G  +   M E
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERG-LLPNLVTYNAI-LGGFSRHGRMQE 662

Query: 491 S---LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +   L + +D   N +K     ++ G Y   + + +A R+ + M +R
Sbjct: 663 AEMVLHKMIDKGINPDKSTYTSLING-YVSKDNMKEAFRVHDEMLQR 708



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 40/288 (13%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV ++ L+R Y +A    E    F+L++++    ++   N ++    K    + A  + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           +    G   N  T + ++    K GKLD   +   ++   GV  D V Y T++ AY R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 349 LVAH-----------------------------------AKRLLHELRQPNTIPRETAIT 373
           LV+                                    AKR+L E+      P      
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 374 -ILARAGRIE---EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            +L  + R E   EA  VF +    G V D+  F  ++ +FSRN +    +  FEKM+  
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G  PD+ I  +++N Y +  +   A  + +EM E GCV  D V +  L
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM-DVVTYNTL 440


>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 181/331 (54%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  + DEM + G+APD  TYS L+  + + G ++SA   
Sbjct: 302 PRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARIL 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME D V     ++S ++   R   D+ KA ++   + +SG+ PD   YN MI+ FGK
Sbjct: 362 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  +   MR +G++PD V+++TL++ + +  +   A+ +F EM E NCP   TT
Sbjct: 422 YNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTT 481

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI++ G+ +     + +   M++ G+ P++++Y TL+ VYG +  + EAI     M+
Sbjct: 482 YNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 541

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   Y+ ++  Y +    + A N+++ M+  G+E + +  +++I  +G+  ++ 
Sbjct: 542 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVV 601

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  + Q ++ +    D + Y T++ A  RV
Sbjct: 602 EAFSVLQFMKENDFRPDVITYTTLMKALIRV 632



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 206/428 (48%), Gaps = 5/428 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  P    ++ ++    RA   + A  L    +  G+ P     + LI+  G  G   
Sbjct: 226 DSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVP 285

Query: 72  SAIS-WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A + +L+      +      Y+ L++   K+     A  +   +   G+ PD   Y+ +
Sbjct: 286 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLL 345

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ + +A  ++ AR+L++EM   GVKP +  +S +L  + +   + +A +V  EM+    
Sbjct: 346 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGV 405

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N+MID +G+ +    A  +F  MR  GI+P VV++NTL+  + +      A+ 
Sbjct: 406 QPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAME 465

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF+ M+         TYN MI + G+         +M EM+ +G+ PN ITY+T++ ++G
Sbjct: 466 LFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYG 525

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           ++G+   A    + +++ G++  P +Y  ++ AY + GL  HA  ++  +R    + +T+
Sbjct: 526 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 585

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I       R+ EA  V +   +     D+  +  +++   R +++  V  ++E+M
Sbjct: 586 VLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEM 645

Query: 427 RSAGYFPD 434
            ++G  PD
Sbjct: 646 ITSGCAPD 653



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/427 (18%), Positives = 178/427 (41%), Gaps = 35/427 (8%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL---IEEMREQGVKPDTVSYSTL 165
           + + + ++    +PDL +Y+ ++      +   +A +L   + ++R+  ++PD   +S L
Sbjct: 180 LRLLALIREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDL 239

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG- 224
           ++ +        AL + A    +           +I   G      +A+ LF      G 
Sbjct: 240 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGE 299

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P   +YN LL+ Y +      A H+   M    +  +  TY+ ++  Y ++   E A 
Sbjct: 300 IKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESAR 359

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++EM+  G++P++  +S I+A +   G   +A  + +++ +SGV+ D   Y  MI  +
Sbjct: 360 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 419

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +   + HA  + + +R     P                               D+  + 
Sbjct: 420 GKYNCLGHAMDVFNRMRGEGIEP-------------------------------DVVTWN 448

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  ++   +E+F++MR +   P +    +++N  G+   +   + + SEM+E+
Sbjct: 449 TLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQ 508

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G V +   +  ++ +YG    +       E + +D       ++H +   Y +    + A
Sbjct: 509 GLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 568

Query: 525 SRIMNRM 531
             ++  M
Sbjct: 569 LNVVKAM 575


>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 236/511 (46%), Gaps = 45/511 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P    YN ++    RA QW  A  + D+M +  I P R TY+ LI   G  G +
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI---------- 120
             A++  ++M ++ V  DLV ++ ++   ++ + YSK +S F  +K + I          
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 121 ---------------------------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
                                       PD+V + T+I+++      +  +     M  +
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+KP+ VSY+ L+  Y  +    EA SVF E+ +     D+ +   +++ YG+    + A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            ++F  MR+    P++VSYN L+  YG   L  EA+ +   M+R  ++ N+V+  T++  
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+  +  K  +++   + RGI+ N   Y++ I  +   G+ D+A  L++ +R+  V+ D
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHE---LRQPNTIPRE---TAITILARAGRIEEATWV 387
           PV Y  +I    ++     A   L E   L+ P  + +E   + I   ++ G++ EA  +
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP--LSKEVYSSVICAYSKQGQVTEAESM 606

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +    G   D+  +  MI  +   + +     +F +M +    PDS   + ++ ++ K
Sbjct: 607 FTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNK 666

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             +      L   M+E+   F++   F+M+S
Sbjct: 667 GGQPAKVLVLAEFMREKKIPFNNSSFFEMVS 697



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 241/505 (47%), Gaps = 8/505 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           SV +  W+  +  Y      YN+++R   R    + A GLF EM++    PD  TY+ LI
Sbjct: 145 SVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALI 204

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              G+ G +  A++ +  M +  +      Y+NLI       ++ +A+++  ++  +G+ 
Sbjct: 205 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVG 264

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDLV +N +++ + +   + +     E M+   ++PDT + + ++   V+  +  +A+ +
Sbjct: 265 PDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDI 324

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           F  M E    C  D+ T   +I +Y      ++    F +M   G+ P++VSYN L+  Y
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA  +F  +++     +VV+Y +++  YGKS + EKA  + + M+    +PN 
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH- 358
           ++Y+ +I  +G  G L  A  +  ++  +GV+ + V   T++ A  R G     K +L  
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504

Query: 359 -ELR--QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNK 414
            ELR  + NT    +AI      G  ++A  ++R A    +VK D   +  +I    +  
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR-AMRTKKVKPDPVTYNVLISGCCKMS 563

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           KY   +   ++M          + + V+ +Y K  +   A+ ++++M+  GC      + 
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623

Query: 475 QMLSLYGARKDFNMLESLFERLDSD 499
            M+  Y   +++    +LF  +++D
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETD 648



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 35/314 (11%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P    YNV++    +  ++  A G  DEM    I   +  YS++I  + K+G    A
Sbjct: 544 KVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEA 603

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S   +M+      D++ Y+ +I       ++ KA ++F  +++  + PD +A ++++  
Sbjct: 604 ESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRA 663

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K     +  +L E MRE+ +  +  S+           + V A S+  E  E+   + 
Sbjct: 664 FNKGGQPAKVLVLAEFMREKKIPFNNSSF----------FEMVSACSLLREWREIIGLIK 713

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L   +I +   G L                         N LL   G++      + LF 
Sbjct: 714 LMEPSISVVSIGLL-------------------------NQLLHFLGKSGKIETMMKLFY 748

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +     E N  TY+ ++K    +    K   ++Q M+  G++P+   Y +I +      
Sbjct: 749 KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRS 808

Query: 314 KLDRAAMLFQKLRS 327
             + AA++ +++ S
Sbjct: 809 GAEYAAVIQERIES 822


>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 236/511 (46%), Gaps = 45/511 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P    YN ++    RA QW  A  + D+M +  I P R TY+ LI   G  G +
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI---------- 120
             A++  ++M ++ V  DLV ++ ++   ++ + YSK +S F  +K + I          
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 121 ---------------------------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
                                       PD+V + T+I+++      +  +     M  +
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+KP+ VSY+ L+  Y  +    EA SVF E+ +     D+ +   +++ YG+    + A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            ++F  MR+    P++VSYN L+  YG   L  EA+ +   M+R  ++ N+V+  T++  
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+  +  K  +++   + RGI+ N   Y++ I  +   G+ D+A  L++ +R+  V+ D
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHE---LRQPNTIPRE---TAITILARAGRIEEATWV 387
           PV Y  +I    ++     A   L E   L+ P  + +E   + I   ++ G++ EA  +
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP--LSKEVYSSVICAYSKQGQVTEAESM 606

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +    G   D+  +  MI  +   + +     +F +M +    PDS   + ++ ++ K
Sbjct: 607 FTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNK 666

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             +      L   M+E+   F++   F+M+S
Sbjct: 667 GGQPAKVLVLAEFMREKKIPFNNSSFFEMVS 697



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 241/505 (47%), Gaps = 8/505 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           SV +  W+  +  Y      YN+++R   R    + A GLF EM++    PD  TY+ LI
Sbjct: 145 SVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALI 204

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              G+ G +  A++ +  M +  +      Y+NLI       ++ +A+++  ++  +G+ 
Sbjct: 205 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVG 264

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDLV +N +++ + +   + +     E M+   ++PDT + + ++   V+  +  +A+ +
Sbjct: 265 PDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDI 324

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           F  M E    C  D+ T   +I +Y      ++    F +M   G+ P++VSYN L+  Y
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA  +F  +++     +VV+Y +++  YGKS + EKA  + + M+    +PN 
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH- 358
           ++Y+ +I  +G  G L  A  +  ++  +GV+ + V   T++ A  R G     K +L  
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504

Query: 359 -ELR--QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNK 414
            ELR  + NT    +AI      G  ++A  ++R A    +VK D   +  +I    +  
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR-AMRTKKVKPDPVTYNVLISGCCKMS 563

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           KY   +   ++M          + + V+ +Y K  +   A+ ++++M+  GC      + 
Sbjct: 564 KYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYT 623

Query: 475 QMLSLYGARKDFNMLESLFERLDSD 499
            M+  Y   +++    +LF  +++D
Sbjct: 624 AMIHAYDVAENWEKASALFLEMETD 648



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 128/312 (41%), Gaps = 35/312 (11%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P    YNV++    +  ++  A G  DEM    I   +  YS++I  + K+G    A
Sbjct: 544 KVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEA 603

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S   +M+      D++ Y+ +I       ++ KA ++F  +++  + PD +A ++++  
Sbjct: 604 ESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRA 663

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K     +  +L E MRE+ +  +  S+           + V A S+  E  E+   + 
Sbjct: 664 FNKGGQPAKVLVLAEFMREKKIPFNNSSF----------FEMVSACSLLREWREIIGLIK 713

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L   +I +   G L                         N LL   G++      + LF 
Sbjct: 714 LMEPSISVVSIGLL-------------------------NQLLHFLGKSGKIETMMKLFY 748

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +     E N  TY+ ++K    +    K   ++Q M+  G++P+   Y +I +      
Sbjct: 749 KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRS 808

Query: 314 KLDRAAMLFQKL 325
             + AA++ +++
Sbjct: 809 GAEYAAVIQERI 820


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 213/421 (50%), Gaps = 4/421 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++  +N ++  + +  ++  A  LFD+M  RG  PD +TY+T+I    K G   +A    
Sbjct: 191 TIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLF 250

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M +     D+V YS +I+   K    ++A+ IFS +K+ GI P++  YN++I      
Sbjct: 251 RKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNF 310

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             ++EA  ++ EM    + P+ V++S L+N++ +     EA  V   M E+    ++ T 
Sbjct: 311 SRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTY 370

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +++ Y       +A +LF  M   G  P V SYN L+  Y +A+  GEA  LF  M  
Sbjct: 371 SSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH 430

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  ++V+YNT+I    +     +A +L + M   G  P+  TYS ++  + K G L +
Sbjct: 431 QGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAK 490

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
           A  LF+ ++S+ ++ + V+Y  +I A  +   +  A++L  EL     QPN     T I 
Sbjct: 491 AFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIIN 550

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + G ++EA   FR   + G   +   +  +I  F ++K  +  +++  +MR  G+  
Sbjct: 551 GLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVA 610

Query: 434 D 434
           D
Sbjct: 611 D 611



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 235/492 (47%), Gaps = 42/492 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAH-GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P +  +N +L  +++ + +  A   L  +M   G++PD YT   LI CF +    D   S
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L ++ +  +   +V ++ LI    K+  + +A+ +F  + + G  PD+  Y T+IN   
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA------------ 183
           K      A  L  +M E G +PD V+YST+++   ++ +  EAL +F+            
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298

Query: 184 -----------------------EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
                                  EM  +N   ++ T +++I+++ +     +A  +  +M
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358

Query: 221 RKMGIDPSVVSYNTLLRVYG-EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            +MG++P+VV+Y++L+  Y  +AE+  EA  LF +M  K  + +V +YN +I  Y K+  
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVV-EARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A  L  EM ++G+ P+ ++Y+T+I    + G+L  A  LF+ + ++G   D   Y  
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  + + G +A A RL   ++    +PN +     I  + ++  ++EA  +F + F  G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++ ++  +I    +       +E F  M   G  P+     +++  + + ++   A 
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597

Query: 456 DLYSEMQEEGCV 467
            L  EM+E+G V
Sbjct: 598 QLIGEMREKGFV 609



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 184/364 (50%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P V  Y  ++  + +  +   A GLF +M + G  PD  TYST+I    K+   + A+
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M+   +S ++  Y++LI+     S + +A ++ + + S  I+P++V ++ +IN+F
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EAR +++ M E GV+P+ V+YS+L+N Y    + VEA  +F  M    C  D+
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + NI+I+ Y +     +A +LF  M   G+ P +VSYNTL+    +     EA  LF+ 
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       ++ TY+ ++  + K     KA  L + MQ+  ++PN + Y+ +I    K+  
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L  A  LF +L   G++ +  +Y T+I    + GL+  A      + +    P E +  +
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 375 LARA 378
           + R 
Sbjct: 583 IIRG 586



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 207/429 (48%), Gaps = 5/429 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMF-DSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           F+ M  R   P    ++ L++   K   + D+ IS  +QME   +S D      LI    
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +L       S+ +++   G+   +V +NT+IN   K   F +A  L ++M  +G +PD  
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVH 228

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T++N   +  + V A  +F +M E  C  D+ T + +ID   +     +A  +F  M
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 288

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  GI P++ +YN+L++       + EA  +   M    I  N+VT++ +I I+ K    
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  +++ M   G+EPN +TYS+++  +    ++  A  LF  + + G + D   Y  +
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNIL 408

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +   +  AK+L    +H+   P+ +   T I  L + GR+ EA  +F+     G 
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 468

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + D+  +  +++ F +    A    +F  M+S    P+  +  +++++  K R  + A  
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 528

Query: 457 LYSEMQEEG 465
           L+SE+  +G
Sbjct: 529 LFSELFVQG 537



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 176/351 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA   P V  Y+ ++ ++ + ++   A  +F  M+ +GI+P+ +TY++LI        + 
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A + L +M    +  ++V +S LI +  K  +  +A  +   +   G+ P++V Y++++
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N +       EAR L + M  +G KPD  SY+ L+N Y +  +  EA  +F EM      
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + N +ID   QL   ++A  LF +M   G  P + +Y+ LL  + +     +A  L
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR MQ   ++ N+V YN +I    KS   ++A  L  E+  +G++PN   Y+TII    K
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            G LD A   F+ +   G   +   Y  +I  + +    + A +L+ E+R+
Sbjct: 555 EGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE 605



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 2/319 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++F YN +++ +    +W  A  + +EM    I P+  T+S LI  F KEG    A  
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARG 353

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M +  V  ++V YS+L+      ++  +A  +F  + + G  PD+ +YN +IN + 
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDL 194
           KAK   EA+ L  EM  QG+ PD VSY+TL++   +  +  EA  +F  M    N P DL
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP-DL 472

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I++D + +      A RLF +M+   + P++V YN L+    ++    EA  LF  
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  + ++ NV  Y T+I    K    ++A    + M+  G  PN  +Y+ II  + +   
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592

Query: 315 LDRAAMLFQKLRSSGVEID 333
             RA  L  ++R  G   D
Sbjct: 593 ESRAVQLIGEMREKGFVAD 611



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 64/147 (43%)

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
           ML +K R   ++ + +L   + + +    +++ +K++      P+T      I    +  
Sbjct: 112 MLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQ 171

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           R++    V  +    G    I  F  +I    +  K+   +E+F+ M + GY PD H   
Sbjct: 172 RVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYT 231

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGC 466
            ++N   K+ E   A  L+ +M E GC
Sbjct: 232 TIINGLCKIGETVAAAGLFRKMGEAGC 258


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 212/475 (44%), Gaps = 44/475 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AY  ++    R K     + L  EM++R I    YTY T++      G  D A + 
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M       ++V+Y+ LI+   + S +  A+ +   +K  GI PD+  YN++I    K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK   EAR  + EM E G+KP+  +Y   ++ Y+E  +F  A     EM E     +   
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 197 CNIMIDVY-------------------GQLDMAK----------------DADRLFWSMR 221
           C  +I+ Y                   G L  AK                DA+ +F  MR
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P V SY  L+  + +     +A  +F  M  + +  NV+ YN ++  + +S E E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  L+ EM  +G+ PNA+TY TII  + K+G L  A  LF +++  G+  D  +Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 342 VAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDA---- 394
               R+  V  A  +    ++    +T P    I  + + G+ E  T V  +  D     
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 395 -GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            G+  D++ +  MI+   +        E+F +M++A   P       +LN Y K+
Sbjct: 800 FGKPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 207/455 (45%), Gaps = 4/455 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y+V++  + + K+ E A  L  EM   G++ D +TYS LI    K    D+A   
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M    ++    +Y   I +  K     KA ++F  + +SG++P   AY ++I  + +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  ++   L+ EM+++ +     +Y T++     +     A ++  EM    C  ++  
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + Q     DA R+   M++ GI P +  YN+L+    +A+   EA      M 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N  TY   I  Y ++ E   A   ++EM+  G+ PN +  + +I  + K GK+ 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A   ++ +   G+  D   Y  ++    +   V  A+ +  E+R     P+       I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              ++ G +++A+ +F +  + G   ++ ++  ++  F R+ +     E+ ++M   G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P++     +++ Y K  +   A  L+ EM+ +G V
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 216/499 (43%), Gaps = 49/499 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P +F YN ++  + +AK+ + A     EM + G+ P+ +TY   I+ + +   F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            SA  ++++M +  V  + VL + LI    K     +A S +  +   GI+ D   Y  +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     +A  +  EMR +G+ PD  SY  L+N + +     +A S+F EM E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE--- 655

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                            G+ P+V+ YN LL  +  +    +A  
Sbjct: 656 --------------------------------EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K +  N VTY T+I  Y KS +  +A  L  EM+ +G+ P++  Y+T++    
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--------Q 362
           +   ++RA  +F      G       +  +I    + G       +L+ L         +
Sbjct: 744 RLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +     I  L + G +E A  +F Q  +A  +  +  +  ++  + +  + A +  V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGK----LREFETADDLYSE-MQEEGCVFSDQVHFQML 477
           F++  +AG  PD  + ++++N++ K     +     D ++++   ++GC  S      +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 478 SLYGARKDFNMLESLFERL 496
           S +    +  + E + E +
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/568 (21%), Positives = 230/568 (40%), Gaps = 59/568 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +    V+L  +LR  + +L   ++  M +R +  D  TY  LI    + G        
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV------ 237

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q+ +D      VL+    E      +   A+ +   +   G+VP    Y+ +I+   K
Sbjct: 238 --QLGKD------VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNC-PLD 193
            K  ++A+ L+ EM   GV  D  +YS L++  ++      A  +  EM  + +N  P  
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              C  ++   G ++ AK    LF  M   G+ P   +Y +L+  Y   +   +   L  
Sbjct: 350 YDCCICVMSKEGVMEKAK---ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 254 LMQRKEI-----------------------------------EQNVVTYNTMIKIYGKSL 278
            M+++ I                                     NVV Y T+IK + ++ 
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
               A  +++EM+ +GI P+   Y+++I    KA ++D A     ++  +G++ +   Y 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
             I  Y      A A + + E+R+   +P +   T L     + G++ EA   +R   D 
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D   +  ++    +N K  +  E+F +MR  G  PD     +++N + KL   + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
             ++ EM EEG   +  ++  +L  +    +    + L + +           +  +   
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
           Y ++  L +A R+ + M  +     S V
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFV 734



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 119/254 (46%), Gaps = 43/254 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL-------------ITC 63
           P+   Y  ++    ++     A  LFDEM+ +G+ PD + Y+TL             IT 
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 64  FG--KEGM------FDSAISWLQQMEQDRVSGDL-----------------VLYSNLIEL 98
           FG  K+G       F++ I+W+ +  +  +  ++                 V Y+ +I+ 
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K  +   A  +F +++++ ++P ++ Y +++N + K     E   + +E    G++PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEM---NEVN--CPLDLTTCNIMIDVYGQLDMAKDA 213
            + YS ++N +++     +AL +  +M   N V+  C L ++TC  ++  + ++   + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 214 DRLFWSMRKMGIDP 227
           +++  +M ++   P
Sbjct: 935 EKVMENMVRLQYIP 948



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 141/372 (37%), Gaps = 60/372 (16%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI------------ 201
           G   D V +  L + Y+      EA+ VF+    +     L+ C +++            
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 202 -DVY-------------------------GQLDMAKD------------------ADRLF 217
            DVY                         G + + KD                  A +L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            SM   G+ P   +Y+ L+    + +   +A  L   M    +  +  TY+ +I    K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              + A  L+ EM + GI      Y   I +  K G +++A  LF  + +SG+      Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFD 393
            ++I  Y R   V     LL E+++ N +       T +  +  +G ++ A  + ++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   ++ ++  +I+ F +N ++ + + V ++M+  G  PD      ++    K +  + 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 454 ADDLYSEMQEEG 465
           A     EM E G
Sbjct: 506 ARSFLVEMVENG 517


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 212/475 (44%), Gaps = 44/475 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AY  ++    R K     + L  EM++R I    YTY T++      G  D A + 
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M       ++V+Y+ LI+   + S +  A+ +   +K  GI PD+  YN++I    K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK   EAR  + EM E G+KP+  +Y   ++ Y+E  +F  A     EM E     +   
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 197 CNIMIDVY-------------------GQLDMAK----------------DADRLFWSMR 221
           C  +I+ Y                   G L  AK                DA+ +F  MR
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P V SY  L+  + +     +A  +F  M  + +  NV+ YN ++  + +S E E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  L+ EM  +G+ PNA+TY TII  + K+G L  A  LF +++  G+  D  +Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 342 VAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDA---- 394
               R+  V  A  +    ++    +T P    I  + + G+ E  T V  +  D     
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 395 -GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            G+  D++ +  MI+   +        E+F +M++A   P       +LN Y K+
Sbjct: 800 FGKPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 217/492 (44%), Gaps = 40/492 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y+V++  + + K+ E A  L  EM   G++ D +TYS LI    K    D+A   
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M    ++    +Y   I +  K     KA ++F  + +SG++P   AY ++I  + +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394

Query: 137 AKLFKEARLLIEEMREQ-----------------------------------GVKPDTVS 161
            K  ++   L+ EM+++                                   G +P+ V 
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+  +++N +F +A+ V  EM E     D+   N +I    +     +A      M 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G+ P+  +Y   +  Y EA  F  A    + M+   +  N V    +I  Y K  +  
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +  + M ++GI  +A TY+ ++    K  K+D A  +F+++R  G+  D   Y  +I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             + ++G +  A  +  E+ +    PN I     +    R+G IE+A  +  +    G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  +I+ + ++   A    +F++M+  G  PDS +   +++   +L + E A  +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 458 YSEMQEEGCVFS 469
           +    ++GC  S
Sbjct: 755 FG-TNKKGCASS 765



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 216/499 (43%), Gaps = 49/499 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P +F YN ++  + +AK+ + A     EM + G+ P+ +TY   I+ + +   F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            SA  ++++M +  V  + VL + LI    K     +A S +  +   GI+ D   Y  +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     +A  +  EMR +G+ PD  SY  L+N + +     +A S+F EM E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE--- 655

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                            G+ P+V+ YN LL  +  +    +A  
Sbjct: 656 --------------------------------EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K +  N VTY T+I  Y KS +  +A  L  EM+ +G+ P++  Y+T++    
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--------Q 362
           +   ++RA  +F      G       +  +I    + G       +L+ L         +
Sbjct: 744 RLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +     I  L + G +E A  +F Q  +A  +  +  +  ++  + +  + A +  V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGK----LREFETADDLYSE-MQEEGCVFSDQVHFQML 477
           F++  +AG  PD  + ++++N++ K     +     D ++++   ++GC  S      +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 478 SLYGARKDFNMLESLFERL 496
           S +    +  + E + E +
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/568 (21%), Positives = 229/568 (40%), Gaps = 59/568 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +    V+L  +LR  + +L   ++  M +R +  D  TY  LI    + G        
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV------ 237

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q+ +D      VL+    E      +   A+ +   +   G+VP    Y+ +I+   K
Sbjct: 238 --QLGKD------VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNC-PLD 193
            K  ++A+ L+ EM   GV  D  +YS L++  ++      A  +  EM  + +N  P  
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              C  ++   G ++ AK    LF  M   G+ P   +Y +L+  Y   +   +   L  
Sbjct: 350 YDCCICVMSKEGVMEKAK---ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 254 LMQRKEI-----------------------------------EQNVVTYNTMIKIYGKSL 278
            M+++ I                                     NVV Y T+IK + ++ 
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
               A  +++EM+ +GI P+   Y+++I    KA ++D A     ++  +G++ +   Y 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
             I  Y      A A + + E+R+   +P +   T L     +  ++ EA   +R   D 
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ 586

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D   +  ++    +N K  +  E+F +MR  G  PD     +++N + KL   + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
             ++ EM EEG   +  ++  +L  +    +    + L + +           +  +   
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
           Y ++  L +A R+ + M  +     S V
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFV 734



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 119/254 (46%), Gaps = 43/254 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL-------------ITC 63
           P+   Y  ++    ++     A  LFDEM+ +G+ PD + Y+TL             IT 
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 64  FG--KEGM------FDSAISWLQQMEQDRVSGDL-----------------VLYSNLIEL 98
           FG  K+G       F++ I+W+ +  +  +  ++                 V Y+ +I+ 
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K  +   A  +F +++++ ++P ++ Y +++N + K     E   + +E    G++PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEM---NEVN--CPLDLTTCNIMIDVYGQLDMAKDA 213
            + YS ++N +++     +AL +  +M   N V+  C L ++TC  ++  + ++   + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 214 DRLFWSMRKMGIDP 227
           +++  +M ++   P
Sbjct: 935 EKVMENMVRLQYIP 948



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 141/372 (37%), Gaps = 60/372 (16%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI------------ 201
           G   D V +  L + Y+      EA+ VF+    +     L+ C +++            
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 202 -DVY-------------------------GQLDMAKD------------------ADRLF 217
            DVY                         G + + KD                  A +L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            SM   G+ P   +Y+ L+    + +   +A  L   M    +  +  TY+ +I    K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              + A  L+ EM + GI      Y   I +  K G +++A  LF  + +SG+      Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFD 393
            ++I  Y R   V     LL E+++ N +       T +  +  +G ++ A  + ++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   ++ ++  +I+ F +N ++ + + V ++M+  G  PD      ++    K +  + 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 454 ADDLYSEMQEEG 465
           A     EM E G
Sbjct: 506 ARSFLVEMVENG 517


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 212/475 (44%), Gaps = 44/475 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AY  ++    R K     + L  EM++R I    YTY T++      G  D A + 
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M       ++V+Y+ LI+   + S +  A+ +   +K  GI PD+  YN++I    K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK   EAR  + EM E G+KP+  +Y   ++ Y+E  +F  A     EM E     +   
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 197 CNIMIDVY-------------------GQLDMAK----------------DADRLFWSMR 221
           C  +I+ Y                   G L  AK                DA+ +F  MR
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P V SY  L+  + +     +A  +F  M  + +  NV+ YN ++  + +S E E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  L+ EM  +G+ PNA+TY TII  + K+G L  A  LF +++  G+  D  +Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 342 VAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDA---- 394
               R+  V  A  +    ++    +T P    I  + + G+ E  T V  +  D     
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 395 -GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            G+  D++ +  MI+   +        E+F +M++A   P       +LN Y K+
Sbjct: 800 FGKPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 207/455 (45%), Gaps = 4/455 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y+V++  + + K+ E A  L  EM   G++ D +TYS LI    K    D+A   
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M    ++    +Y   I +  K     KA ++F  + +SG++P   AY ++I  + +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  ++   L+ EM+++ +     +Y T++     +     A ++  EM    C  ++  
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + Q     DA R+   M++ GI P +  YN+L+    +A+   EA      M 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N  TY   I  Y ++ E   A   ++EM+  G+ PN +  + +I  + K GK+ 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A   ++ +   G+  D   Y  ++    +   V  A+ +  E+R     P+       I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              ++ G +++A+ +F +  + G   ++ ++  ++  F R+ +     E+ ++M   G  
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P++     +++ Y K  +   A  L+ EM+ +G V
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 216/499 (43%), Gaps = 49/499 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P +F YN ++  + +AK+ + A     EM + G+ P+ +TY   I+ + +   F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            SA  ++++M +  V  + VL + LI    K     +A S +  +   GI+ D   Y  +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     +A  +  EMR +G+ PD  SY  L+N + +     +A S+F EM E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE--- 655

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                            G+ P+V+ YN LL  +  +    +A  
Sbjct: 656 --------------------------------EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K +  N VTY T+I  Y KS +  +A  L  EM+ +G+ P++  Y+T++    
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--------Q 362
           +   ++RA  +F      G       +  +I    + G       +L+ L         +
Sbjct: 744 RLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +     I  L + G +E A  +F Q  +A  +  +  +  ++  + +  + A +  V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGK----LREFETADDLYSE-MQEEGCVFSDQVHFQML 477
           F++  +AG  PD  + ++++N++ K     +     D ++++   ++GC  S      +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 478 SLYGARKDFNMLESLFERL 496
           S +    +  + E + E +
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/568 (21%), Positives = 230/568 (40%), Gaps = 59/568 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +    V+L  +LR  + +L   ++  M +R +  D  TY  LI    + G        
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV------ 237

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q+ +D      VL+    E      +   A+ +   +   G+VP    Y+ +I+   K
Sbjct: 238 --QLGKD------VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNC-PLD 193
            K  ++A+ L+ EM   GV  D  +YS L++  ++      A  +  EM  + +N  P  
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              C  ++   G ++ AK    LF  M   G+ P   +Y +L+  Y   +   +   L  
Sbjct: 350 YDCCICVMSKEGVMEKAK---ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 254 LMQRKEI-----------------------------------EQNVVTYNTMIKIYGKSL 278
            M+++ I                                     NVV Y T+IK + ++ 
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
               A  +++EM+ +GI P+   Y+++I    KA ++D A     ++  +G++ +   Y 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
             I  Y      A A + + E+R+   +P +   T L     + G++ EA   +R   D 
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D   +  ++    +N K  +  E+F +MR  G  PD     +++N + KL   + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
             ++ EM EEG   +  ++  +L  +    +    + L + +           +  +   
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706

Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
           Y ++  L +A R+ + M  +     S V
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFV 734



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 119/254 (46%), Gaps = 43/254 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL-------------ITC 63
           P+   Y  ++    ++     A  LFDEM+ +G+ PD + Y+TL             IT 
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 64  FG--KEGM------FDSAISWLQQMEQDRVSGDL-----------------VLYSNLIEL 98
           FG  K+G       F++ I+W+ +  +  +  ++                 V Y+ +I+ 
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K  +   A  +F +++++ ++P ++ Y +++N + K     E   + +E    G++PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEM---NEVN--CPLDLTTCNIMIDVYGQLDMAKDA 213
            + YS ++N +++     +AL +  +M   N V+  C L ++TC  ++  + ++   + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 214 DRLFWSMRKMGIDP 227
           +++  +M ++   P
Sbjct: 935 EKVMENMVRLQYIP 948



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 141/372 (37%), Gaps = 60/372 (16%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI------------ 201
           G   D V +  L + Y+      EA+ VF+    +     L+ C +++            
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 202 -DVY-------------------------GQLDMAKD------------------ADRLF 217
            DVY                         G + + KD                  A +L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            SM   G+ P   +Y+ L+    + +   +A  L   M    +  +  TY+ +I    K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              + A  L+ EM + GI      Y   I +  K G +++A  LF  + +SG+      Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFD 393
            ++I  Y R   V     LL E+++ N +       T +  +  +G ++ A  + ++   
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   ++ ++  +I+ F +N ++ + + V ++M+  G  PD      ++    K +  + 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 454 ADDLYSEMQEEG 465
           A     EM E G
Sbjct: 506 ARSFLVEMVENG 517


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 240/509 (47%), Gaps = 10/509 (1%)

Query: 23  NVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           N +L+    AK+ + A   L     + G  PD ++YS L+     +G    A   L+ M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 82  QDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +     S D+V YS +I+   K  D +KA  +F  +   GI PD V Y+++++   KA+ 
Sbjct: 210 EGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A   + +M  +GV P+  +Y+ L+  Y    ++ EA+ VF EM   +   D+ T ++
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +    K+A  +F +M   G +P+V SY  +L  Y       +   LF LM    
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  ++ T+N +IK Y      +KA  +  EM++ G++P+ +TY T+IA   + GK+D A 
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITIL 375
             F ++   GV  D   Y  +I  +   G +  AK L+ E+       + +   + I  L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + GR+ +A  +F    + G      V+  +++ +    K    + VF+ M SAG  P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFE 494
            +   ++N Y K+   +    L+ EM ++G   S  ++  ++  L+ A +         E
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLND 523
             +S   +NK   + V+ G+++  NR  D
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFK--NRCFD 656



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 248/565 (43%), Gaps = 47/565 (8%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP V AY+ V+    +      A  LF EM QRGI PD  TYS+++    K    D 
Sbjct: 213 AVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDK 272

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM    V  +   Y+NLI        + +A+ +F  ++   I+PD+V  + ++ 
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  P+  SY+ +LN Y      V+   +F  M       
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR------------------- 293
             M  + +  +   Y+ +I+ +       KA  L+ E+ N                    
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512

Query: 294 ----------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G+ P A+ YS ++  +   GK+++A  +F  + S+G+E + V+Y
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   +   +  ++    +N+ +   I +F+++R+     +   +  ++    + R  E 
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEE 692

Query: 454 ADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHH 509
           A DL++ +   G   CV +  +    L   G  ++    E +F  + ++    + + L+H
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEE---AEDMFSSMQNAGCEPDSRLLNH 749

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
           VV  + ++ N +  A   ++++++R
Sbjct: 750 VVRELLKK-NEIVRAGAYLSKIDER 773



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 132/292 (45%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           ++ ++ N+ +  +   A  +FD     G+ P    YS L+  +   G  + A+     M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  + V+Y  L+    K+    + +S+F  +   GI P  + YN +I+   +A    
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A++   EM E G+  +  +Y+ +L    +N  F EA+ +F E+  +N  +++ T N MI
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               Q    ++A  LF S+ + G+ P VV+Y+ ++    +  L  EA  +F  MQ    E
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    N +++   K  E  +A   + ++  R      +T   ++ ++   G
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 212/425 (49%), Gaps = 6/425 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P+V   N+++  + +AK+ + A  +F+ M  +  +PD  T+ +LI   GK+G  
Sbjct: 434 KEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRV 493

Query: 71  DSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    +QM + D++  + V+Y++LI+   K         IF  +   G  PDL   N 
Sbjct: 494 DDAYRLYEQMLDSDKIP-NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            ++   KA    + R L EE++ +G  PD +SYS L++  V+     E   +F  M E  
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C LD    N  ID + +      A +L   M+  G  P+VV+Y +++    + +   EA 
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF   +   +E NVV Y+++I  +GK    ++A  +M+E+  +G+ PN  T++ ++   
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 732

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
            KA +++ A + FQ +++     + + Y  +I    RV     A     E++    +PNT
Sbjct: 733 VKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNT 792

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   T I  LA+AG I EA+ +F +    G V D + +  +IE  S +++     ++FE+
Sbjct: 793 ITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852

Query: 426 MRSAG 430
            R  G
Sbjct: 853 TRMKG 857



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 241/529 (45%), Gaps = 71/529 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  P  +AYN ++     A +++ A+ L +  + RG  P    Y+ ++TC GK+G  
Sbjct: 330 EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRL 389

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M++D  + +L  Y+ LI++  K  +   A  +   +K +G+ P+++  N M
Sbjct: 390 GEALRTFEEMKKD-AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIM 448

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LY---VENHK 174
           I+   KAK   EA  + E M  +   PD V++ +L++             LY   +++ K
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508

Query: 175 FVEAL-------------------SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
              A+                    +F EM    C  DL   N  +D   +         
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRA 568

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  ++  G  P V+SY+ L+    +A    E   LF  M+ +    +   YNT I  + 
Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           KS +  KA  L++EM+ +G +P  +TY ++I    K  +LD A MLF++ +S+G+E++ V
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +Y ++I  + +VG +  A  ++ EL Q    P                            
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP---------------------------- 720

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  + C+++   + ++    +  F+ M++    P+    ++++N   ++R+F  A 
Sbjct: 721 ---NVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNI 502
             + EMQ++G   +   +  M++  G  K  N+ E  SLFER  ++  +
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIA--GLAKAGNIAEASSLFERFKANGGV 824



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 226/475 (47%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y  SV  +  V+R   R  + + A  L DEM+   +  D   Y+  I CFGK G  
Sbjct: 225 QELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKV 284

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +++   +  D V Y+++I +  K +   +A+ IF +++ +  VP   AYNTM
Sbjct: 285 DMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM 344

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  + +G  P  ++Y+ +L    +  +  EAL  F EM +   
Sbjct: 345 IMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA 404

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +L+T N++ID+  +    + A ++  +M++ G+ P+V++ N ++    +A+   EA  
Sbjct: 405 P-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M  K    + VT+ ++I   GK    + A  L ++M +    PNA+ Y+++I  + 
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+ +    +F+++   G   D  L    +    + G     + L  E++    IP   
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + +I    L +AG   E   +F    + G V D   +   I+ F ++ K     ++ E+M
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           ++ G  P       V++   K+   + A  L+ E +  G   +  ++  ++  +G
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFG 698



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 182/362 (50%), Gaps = 5/362 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++++  +  + E  H +F EM  RG +PD    +  + C  K G      + 
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++++      D++ YS LI    K     +   +F  +K  G V D  AYNT I+ F K
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A  L+EEM+ +G +P  V+Y ++++   +  +  EA  +F E       L++  
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID +G++    +A  +   + + G+ P+V ++N LL    +AE   EA+  F+ M+
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             +   N +TY+ +I    +  +  KA    QEMQ +G++PN ITY+T+IA   KAG + 
Sbjct: 750 NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLHELRQPNT-IPRETAIT 373
            A+ LF++ +++G   D   Y  +I  ++Y R  + A+  ++  E R     I  +T I 
Sbjct: 810 EASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY--KIFEETRMKGCNIHTKTCIA 867

Query: 374 IL 375
           +L
Sbjct: 868 LL 869



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/525 (21%), Positives = 212/525 (40%), Gaps = 75/525 (14%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + PS      ++ + +++ +      L   MR+    P    Y+TLI         D 
Sbjct: 157 AGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDI 216

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            ++   QM++      + L++ +I +  +      A+S+   +KS+ +  D+V YN  I+
Sbjct: 217 MLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCID 276

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            FGKA     A     E++  G+ PD V+Y++++ +  + ++  EA+ +F +M +     
Sbjct: 277 CFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR--- 333

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF------- 245
                N+                           P   +YNT++  YG A  F       
Sbjct: 334 -----NV---------------------------PCAYAYNTMIMGYGSAGKFDEAYSLL 361

Query: 246 ----------------------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
                                       GEA+  F  M +K+   N+ TYN +I +  K+
Sbjct: 362 ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKA 420

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            E E A  +   M+  G+ PN +T + +I    KA KLD A  +F+ +       D V +
Sbjct: 421 GEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTF 480

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFD 393
            ++I    + G V  A RL  ++   + IP     T L ++    GR E+   +F++   
Sbjct: 481 CSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIH 540

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+ +    ++   +  +      +FE+++S G+ PD    +++++   K      
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARE 600

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             +L+  M+E+GCV     +   +  +      N    L E + +
Sbjct: 601 TYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT 645



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 157/312 (50%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  +++A      + LF  M+++G   D + Y+T I  F K G  + A 
Sbjct: 578 FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAY 637

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+       +V Y ++I+   K+    +A  +F   KS+G+  ++V Y+++I+ F
Sbjct: 638 QLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGF 697

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EE+ ++G+ P+  +++ LL+  V+  +  EAL  F  M  +    + 
Sbjct: 698 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNH 757

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K G+ P+ ++Y T++    +A    EA  LF  
Sbjct: 758 ITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFER 817

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  +YN +I+    S    +A  + +E + +G   +  T   ++    K   
Sbjct: 818 FKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDEC 877

Query: 315 LDRAAMLFQKLR 326
           L++AA++   LR
Sbjct: 878 LEQAAIVGAVLR 889



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 149/317 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +   N  +  V +A +      LF+E++ RG  PD  +YS LI    K G       
Sbjct: 544 SPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYE 603

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M++     D   Y+  I+   K    +KA  +   +K+ G  P +V Y ++I+   
Sbjct: 604 LFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLA 663

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EA +L EE +  G++ + V YS+L++ + +  +  EA  +  E+ +     ++ 
Sbjct: 664 KIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 723

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   + +   +A   F +M+ +   P+ ++Y+ L+        F +A   ++ M
Sbjct: 724 TWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEM 783

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           Q++ ++ N +TY TMI    K+    +A++L +  +  G  P++ +Y+ II     + + 
Sbjct: 784 QKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRA 843

Query: 316 DRAAMLFQKLRSSGVEI 332
             A  +F++ R  G  I
Sbjct: 844 MEAYKIFEETRMKGCNI 860



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 171/411 (41%), Gaps = 49/411 (11%)

Query: 95  LIELARKLSDYSKAISIF---SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           +I + R+  D ++AIS F    R     + P+  AY++++ V  K   F     ++ EM 
Sbjct: 98  VIGVLRRAKDVNQAISYFRWTERKTDQALCPE--AYDSLLLVMAKNVKFDYFEQILGEMS 155

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
             G  P T +   L+   ++++K  E   +   M +       +    +I   G L   +
Sbjct: 156 IAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLI---GALSSVQ 212

Query: 212 DAD---RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
           ++D    LF  M+++G + SV  + T++RV+        A+ L   M+   +  ++V YN
Sbjct: 213 ESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYN 272

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI-------------------- 308
             I  +GK+ + + A     E+++ G+ P+ +TY+++I +                    
Sbjct: 273 VCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332

Query: 309 ---------------WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
                          +G AGK D A  L ++ ++ G     + Y  ++    + G +  A
Sbjct: 333 RNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392

Query: 354 KRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            R   E+++   PN       I +L +AG +E A  V     +AG   ++     MI+  
Sbjct: 393 LRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            + KK      +FE M      PD      +++  GK    + A  LY +M
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 88/173 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ +N +L  +++A++   A   F  M+     P+  TYS LI    +   F+ A  
Sbjct: 719 TPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFV 778

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + Q+M++  +  + + Y+ +I    K  + ++A S+F R K++G VPD  +YN +I    
Sbjct: 779 FWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLS 838

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++   EA  + EE R +G    T +   LL+   ++    +A  V A + E+
Sbjct: 839 YSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREI 891


>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 793

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 248/536 (46%), Gaps = 11/536 (2%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + A  W+    L D M+  GI  DRYTY+TLI+C  +  ++  A  
Sbjct: 211 PAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAK 270

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       D V +++L+++  K   + +AI +   ++  G  P +V YN++I+ + 
Sbjct: 271 VFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYV 330

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L KEA  L EEM  +G++PD ++Y+TL++      K   A+  + EM    C  +L 
Sbjct: 331 KDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLC 390

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I ++G      +   +F  +R  G  P VV++NTLL V+G+  L  E   +F+ M
Sbjct: 391 TYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM 450

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++        TY ++I  Y +    +++  + + M   GI P+  TY+ +++   + G+ 
Sbjct: 451 KKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRW 510

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
           ++A  LF ++ +     D + Y +++ AY     +   K L  ++            +T 
Sbjct: 511 EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTL 570

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           + + ++   + E    F +        DI+V   M+ ++ +N+    V E+   M+ +  
Sbjct: 571 VLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSI 630

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
              +     +++ Y +L + E  +++ +E++  G       +  M+  YG +        
Sbjct: 631 NLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASR 690

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR------RTFNSSL 541
           LF  + S   I     +++    Y   +   +A  ++  M  R      RT+NS L
Sbjct: 691 LFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSIL 746



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 214/424 (50%), Gaps = 13/424 (3%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFVEALS 180
           PD  AY  +++ F +A  F++A  +   M   G++P  V+Y+ +L++Y +    + + ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M     PLD  T N +I    +  + K+A ++F  MR  G +P  V++N+LL VYG
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A +  EAI + + M+      +VVTYN++I  Y K    ++A  L +EM+ +GI+P+ I
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+I+   +AGK+D A   + ++  +G + +   Y  +I  +   G       +  +L
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDL 415

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   +G V +   +  +I  +SR   +
Sbjct: 416 RSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 475

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              +E++++M  AG +PD      VL++  +   +E A+ L++EM+   C   +  +  +
Sbjct: 476 DQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSL 535

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHH----VVAGIYERANRLNDASRIMNRMN 532
           L  Y   K  + +++L E    D    K E HH     +  +  + N L++  +    + 
Sbjct: 536 LHAYANAKKLDKMKALSE----DIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELG 591

Query: 533 KRRT 536
           +RR 
Sbjct: 592 RRRC 595



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 226/500 (45%), Gaps = 39/500 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + YN ++    R   ++ A  +FDEMR  G  PD+ T+++L+  +GK  M D AI  L++
Sbjct: 250 YTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKE 309

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME       +V Y++LI    K     +A  +   ++  GI PD++ Y T+I+   +A  
Sbjct: 310 MELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGK 369

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
              A    +EM   G KP+  +Y+ L+ L+    KF E ++VF ++       D+ T N 
Sbjct: 370 IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNT 429

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++ V+GQ  +  +   +F  M+K G  P   +Y +L+  Y    LF +++ +++ M    
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  ++ TYN ++    +    E+A  L  EM+N    P+ ++YS+++  +  A KLD+  
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMK 549

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-------------------- 359
            L + + +  +E    L +T+++   +V  ++  ++   E                    
Sbjct: 550 ALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVY 609

Query: 360 --------------LRQPNTIPRETA-----ITILARAGRIEEATWVFRQAFDAGEVKDI 400
                         L + ++I   TA     + + +R G  E+   +  +   +G   D 
Sbjct: 610 GKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  MI  + R  +      +F +M+S+G  PD     + + SY     FE A DL   
Sbjct: 670 YSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRY 729

Query: 461 MQEEGCVFSDQVHFQMLSLY 480
           M   GC  +++ +  +L  Y
Sbjct: 730 MVTRGCKPNERTYNSILQEY 749



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 201/385 (52%), Gaps = 9/385 (2%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLL 146
           D   Y+ L+    + S +  A+++F R+ ++GI P +V YN +++V+ K A  +K+   L
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           ++ M+  G+  D  +Y+TL++       + EA  VF EM       D  T N ++DVYG+
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
             M  +A  +   M   G  PSVV+YN+L+  Y +  L  EA  L   M+ K I+ +V+T
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVIT 356

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I    ++ + + A     EM   G +PN  TY+ +I + G  GK      +F  LR
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLR 416

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIE 382
           S+G   D V + T++  + + GL +    +  E+++   +P R+T ++++   +R G  +
Sbjct: 417 SAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 476

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           ++  ++++  +AG   DIS +  ++   +R  ++    ++F +M +    PD    + +L
Sbjct: 477 QSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLL 536

Query: 443 NSYGKLREFET----ADDLYSEMQE 463
           ++Y   ++ +     ++D+Y+E  E
Sbjct: 537 HAYANAKKLDKMKALSEDIYAEKIE 561



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 257/526 (48%), Gaps = 17/526 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDSAIS 75
           P   AY  ++    RA ++  A  +F  M   GI P   TY+ ++  + K  + +   ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M+ D +  D   Y+ LI   R+ + Y +A  +F  ++++G  PD V +N++++V+G
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA++  EA  +++EM   G  P  V+Y++L++ YV++    EA  +  EM       D+ 
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355

Query: 196 TCNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +I   D  G++D A      +  M + G  P++ +YN L++++G    F E + +F
Sbjct: 356 TYTTLISGLDRAGKIDAAIGT---YDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVF 412

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++      +VVT+NT++ ++G++    + + + +EM+  G  P   TY ++I+ + + 
Sbjct: 413 DDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 472

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G  D++  +++++  +G+  D   Y  ++ A  R G    A++L  E+   +  P E + 
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSY 532

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV---FEK 425
           + L    A A ++++   +    + A +++  S  G +  L   N K  N+ E    F +
Sbjct: 533 SSLLHAYANAKKLDKMKALSEDIY-AEKIE--SHHGLVKTLVLVNSKVNNLSETEKAFLE 589

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +       D +++  +++ YGK R  +  +++ S M+      S   +  ++ +Y    D
Sbjct: 590 LGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGD 649

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               E++   + S      +  ++ +   Y R  ++ +ASR+ + M
Sbjct: 650 CEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEM 695



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 183/383 (47%), Gaps = 39/383 (10%)

Query: 17  PSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN +++ + +R K  E+   +FD++R  G  PD  T++TL+  FG+ G+ DS +S
Sbjct: 387 PNLCTYNALIKLHGVRGKFPEMM-AVFDDLRSAGFVPDVVTWNTLLAVFGQNGL-DSEVS 444

Query: 76  WL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + ++M++     +   Y +LI    +   + +++ I+ R+  +GI PD+  YN +++  
Sbjct: 445 GVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSAL 504

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV---------------------ENH 173
            +   +++A  L  EM     +PD +SYS+LL+ Y                       +H
Sbjct: 505 ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564

Query: 174 KFVEAL--------------SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             V+ L                F E+    C LD+   N M+ VYG+  M K  + +   
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSL 624

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M+   I+ S  +YN+L+ +Y       +  ++   ++      +  +YNTMI  YG+  +
Sbjct: 625 MKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQ 684

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A+ L  EM++ G+ P+ +TY+  +  +      + A  L + + + G + +   Y +
Sbjct: 685 MKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNS 744

Query: 340 MIVAYERVGLVAHAKRLLHELRQ 362
           ++  Y R G +A AK  L  L Q
Sbjct: 745 ILQEYCRHGKIADAKSFLSNLPQ 767



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/481 (22%), Positives = 198/481 (41%), Gaps = 74/481 (15%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + P    +N +L    +A+  + A G+  EM   G  P   TY++LI+ + K+G+   
Sbjct: 278 AGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKE 337

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    ++ME   +  D++ Y+ LI    +      AI  +  +  +G  P+L  YN +I 
Sbjct: 338 AAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIK 397

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--- 189
           + G    F E   + +++R  G  PD V+++TLL ++ +N    E   VF EM +     
Sbjct: 398 LHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVP 457

Query: 190 --------------CPL------------------DLTTCNIMIDVYGQLDMAKDADRLF 217
                         C L                  D++T N ++    +    + A++LF
Sbjct: 458 ERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLF 517

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEA-----------ELFGEAIH---------------- 250
             M  +   P  +SY++LL  Y  A           +++ E I                 
Sbjct: 518 AEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKV 577

Query: 251 --------LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
                    F  + R+    ++   N M+ +YGK+   +K   ++  M+   I  +  TY
Sbjct: 578 NNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATY 637

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           ++++ ++ + G  ++   +  +++SSG   D   Y TMI AY R G +  A RL  E++ 
Sbjct: 638 NSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKS 697

Query: 363 PNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              IP      I  ++       EEA  + R     G   +   +  +++ + R+ K A+
Sbjct: 698 SGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIAD 757

Query: 419 V 419
            
Sbjct: 758 A 758



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 127/265 (47%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA   P +  YN VL  + R  +WE A  LF EM      PD  +YS+L+  +      D
Sbjct: 487 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLD 546

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  + +  +++     L   L+ +  K+++ S+    F  L       D+   N M+
Sbjct: 547 KMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMV 606

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +V+GK ++ K+   ++  M+   +   T +Y++L+++Y       +  ++  E+      
Sbjct: 607 SVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGAR 666

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  + N MI  YG+    K+A RLF  M+  G+ P +V+YN  ++ Y    +F EAI L
Sbjct: 667 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDL 726

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGK 276
            R M  +  + N  TYN++++ Y +
Sbjct: 727 VRYMVTRGCKPNERTYNSILQEYCR 751



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 35/172 (20%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   YN ++    R    E    +  E++  G  PDRY+Y+T+I  +G++G         
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKG--------- 683

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            QM++                         A  +FS +KSSG++PD+V YN  +  +   
Sbjct: 684 -QMKE-------------------------ASRLFSEMKSSGLIPDIVTYNIFVKSYVAN 717

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            +F+EA  L+  M  +G KP+  +Y+++L  Y  + K  +A S  + + +++
Sbjct: 718 SMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLH 769



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           H L+ P  +P   A+ +LARAGR+ +A+ +   A +     D S +  ++  FSR  ++ 
Sbjct: 142 HVLQHPRVLP--AAVRVLARAGRLADASALLDAAPEP----DASAYTALVSAFSRASRFR 195

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           + + VF +M + G  P      +VL+ Y K+
Sbjct: 196 DAVAVFRRMVANGIQPAIVTYNVVLHVYSKI 226


>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 187/368 (50%), Gaps = 36/368 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++++  W+  E  ++ +++ YNV+L+ + R +QWEL+  + ++M   GI PD  TYSTLI
Sbjct: 26  ALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLI 85

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +C  +    D+A++W  +M   +   D V YS +I++  K+  Y +A++++  +K SG  
Sbjct: 86  SCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWK 145

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD V Y TM+ +FG+A     A  + +EM+  G++P +V Y+ +++      +   AL V
Sbjct: 146 PDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKV 205

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F E                                   M++ G+ P+ V+ +T++ +Y  
Sbjct: 206 FQE-----------------------------------MKQAGVKPNAVTLSTVMEIYSR 230

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           +    E + +F  M R+++  +++ YN +IK+  ++    +A   ++EM   G +PN  T
Sbjct: 231 SGKVMEGLGIFHHM-RQDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWT 289

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y  +I+++ K G    A  +F +L  +G + D + Y +++  Y         + +LHE+ 
Sbjct: 290 YRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMV 349

Query: 362 QPNTIPRE 369
             N  P E
Sbjct: 350 SANCAPDE 357



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 201/427 (47%), Gaps = 43/427 (10%)

Query: 94  NLIELARKLSDYSKAISIFSRLKS-SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           +++ +   L  +  A+S+F  L++      ++  YN M+ V  + + ++ ++ + E+M  
Sbjct: 12  DVVAILNTLKSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMIN 71

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            G++PD ++YSTL++     +    A++ F  M++  C                      
Sbjct: 72  AGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCV--------------------- 110

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
                         P  V+Y+T++ VYG+   + EA+ L+  +++   + + VTY TM++
Sbjct: 111 --------------PDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVR 156

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           ++G++     A ++  EM+  GI+P ++ Y+ +I+  G+AG++  A  +FQ+++ +GV+ 
Sbjct: 157 LFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKP 216

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQP---NTIPRETAITILARAGRIEEATWVFR 389
           + V   T++  Y R G V     + H +RQ    + I     I +   AG + EA    R
Sbjct: 217 NAVTLSTVMEIYSRSGKVMEGLGIFHHMRQDLACDIIVYNAVIKMCREAGLVPEAEQYLR 276

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  + G   +   +  MI L+++N        +F ++  AGY PD      +L  YG  +
Sbjct: 277 EMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAK 336

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           ++E   ++  EM    C   +++   +L+L  A       +  FE L S   +    + +
Sbjct: 337 DYEKVQEILHEMVSANCAPDERLWCVILNLLDACDT----DVEFEILRSCLRMCNPTMDN 392

Query: 510 VVAGIYE 516
           +V  I+E
Sbjct: 393 IVGHIFE 399



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 36/187 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN+++  + RA +   A  +F EM+Q G+ P+  T ST++  + + G     +  
Sbjct: 181 PGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGI 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARK-----------------------------LSDYSK 107
              M QD ++ D+++Y+ +I++ R+                             +S Y+K
Sbjct: 241 FHHMRQD-LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAK 299

Query: 108 ------AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A  +FS+L  +G  PD+++Y +++  +G AK +++ + ++ EM      PD   
Sbjct: 300 NGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERL 359

Query: 162 YSTLLNL 168
           +  +LNL
Sbjct: 360 WCVILNL 366



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/162 (18%), Positives = 70/162 (43%)

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           + +L R  + E +  +     +AG   D   +  +I   +R       +  F++M  A  
Sbjct: 50  LKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQC 109

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD+   + +++ YGK+ +++ A  LY  +++ G       +  M+ L+G     +   S
Sbjct: 110 VPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVS 169

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +F+ +          +++++     RA R+  A ++   M +
Sbjct: 170 IFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQ 211


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 240/473 (50%), Gaps = 13/473 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P++  YN++LR++      + A  LFD +R RG+APDR TYSTL++ F K    D+A
Sbjct: 154 RIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNA 213

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMIN 132
           +  L +M    V  D V Y+ L+    +  ++ KA+ ++ +L +  G  P+L  YN M++
Sbjct: 214 LYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLD 273

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K  +FKEA  + E M     +PD ++Y T+++    +     A  V++EM +     
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+   N ++  +       +A + + SM   GI  +V SYN +L+   +  +  +A  L+
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW 392

Query: 253 RLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            L+++ + +  ++VT++TMI    +     K+  +++E +  G E +  +YS++I+   K
Sbjct: 393 ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCK 452

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G+LD A  L++K+     + +  +Y  +I  + +    + A R+  ++ +    P TI 
Sbjct: 453 DGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +A +  EA+   R+  + G + D++ +G +I    R+KK    + ++ ++ 
Sbjct: 513 YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572

Query: 428 SAGYFPD---SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             G   D    +I+   L S GK+ E   A  L SEM+E+     + V +  L
Sbjct: 573 DKGLQTDVVMHNILIHGLCSAGKVDE---ASQLLSEMKEKNNCCPNVVTYNTL 622



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/477 (21%), Positives = 207/477 (43%), Gaps = 44/477 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P    YN +L    R  ++E A  +++++ R  G +P+  TY+ ++    K GMF  A  
Sbjct: 227 PDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGD 286

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M  +    D++ Y  +I    + +D   A  ++S +  +G+VPD+V YN+++  F 
Sbjct: 287 VWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFC 346

Query: 136 KAKLFKEARLLIEEMREQGVK-----------------------------------PDTV 160
            A    EA    + M   G++                                   PD V
Sbjct: 347 HAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMV 406

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           ++ST+++   E     ++L +  E       LD  + + MI    +     DA +L+  +
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                 P+   YN L+  + +A  F +AI ++  M   +     +TYNT+I    K+ ++
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A+   +EM  +G   +  TY ++I    +  K+D A  L+ ++   G++ D V++  +
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586

Query: 341 IVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           I      G V  A +LL E+++     PN +   T +      G  ++A  ++    + G
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG 646

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS---HIIALVLNSYGKLR 449
            V DI  +   I+      +    +++  +M ++G  P +   +I+   +  YG ++
Sbjct: 647 LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 208/476 (43%), Gaps = 47/476 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-RGIAPDRYTYST 59
           R + IL  +    R+S S  A  VVL    RA   + A   F  +    G  P   +++ 
Sbjct: 68  RLLGILPRLRHRPRFSES--AALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNA 125

Query: 60  LITCFGKEGMFDSAISWLQQMEQD----RVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           L+  F +   F  A ++   +       R++ +L  Y+ ++       D  +A+++F  L
Sbjct: 126 LLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSL 185

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           +  G+ PD + Y+T+++ F K      A  L++EM    V+PD V Y+ LL     N +F
Sbjct: 186 RCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEF 245

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            +A+ V+ ++                                  +R  G  P++ +YN +
Sbjct: 246 EKAMRVWEQL----------------------------------VRDPGASPNLATYNVM 271

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           L    +  +F EA  ++  M     + +++TY TMI    +S + + A  +  EM   G+
Sbjct: 272 LDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGL 331

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            P+ + Y++++  +  AG++  A   +  +  SG+  +   Y  M+      G+V  A  
Sbjct: 332 VPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATD 390

Query: 356 LLHELRQ-----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           L   L +     P+ +   T I  L   G   ++  +  +A  +G+  D   +  MI   
Sbjct: 391 LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGL 450

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            ++ +  + ++++EK+    + P+SHI   ++N + +  +F  A  +YS+M E  C
Sbjct: 451 CKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 186/395 (47%), Gaps = 25/395 (6%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV----NCPLDLTTCNIMID---VYGQ 206
           G  P   S++ LL+ +V   +F +A + FA ++          +L T NIM+    V G 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           LD A     LF S+R  G+ P  ++Y+TL+  + +      A++L   M   E++ + V 
Sbjct: 175 LDRAV---TLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVC 231

Query: 267 YNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           YN ++    ++ E EKA  + +++ ++ G  PN  TY+ ++    K G    A  +++++
Sbjct: 232 YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERM 291

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRI 381
            ++  + D + Y TMI    R   V  A R+  E+ +   +P      + +     AGR+
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRV 351

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIE-LFSRN--KKYANVIEVFEKMRSAGYFPDSHII 438
            EA W F  +     +++++ +  M++ LF      K  ++ E+ EK  S    PD    
Sbjct: 352 GEA-WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLS--PDMVTF 408

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERL 496
           + +++   +      +  +  E +  G    +  +  M+S  G  KD  + ++  L+E++
Sbjct: 409 STMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS--GLCKDGRLDDAVKLYEKI 466

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             DS      +++ +   + +A++ +DA R+ ++M
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 228/457 (49%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P+VF+YN++L+ +    R+++  EL H + D+ R  G  PD  +Y+T+I  F KEG  D 
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M    +  D+V Y+++I    K     KA+ + + +  +G++PD + YN++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  +   KEA   +++MR  GV+PD V+YS L++   +N + +EA  +F  M +     
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++TT   ++  Y       +   L   M + GI P    ++ L+  Y +     +A+ +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+++ +  N VTY  +I I  KS   E A    ++M + G+ P  I Y+++I      
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K +RA  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +PN I  
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EA  +       G   +   +  +I  + +  +  + + +F++M S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  PD     ++L    + R    A +LY  + E G
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 206/435 (47%), Gaps = 14/435 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y++++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  D  ++S LI    K     +A+ +FS+++  G+ P+ V Y  +I +  K
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A L  E+M ++G+ P  + Y++L++     +K+  A  +  EM +    L+   
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P+V++YNTL+  Y  A    EA+ L   M 
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N VTY+T+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------RQPNTIP 367
            A  L+ ++  SG +I+   Y  ++    +  L   A ++   L         R  N + 
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM- 657

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + GR +EA  +F      G V +   +  M E          + ++F  M 
Sbjct: 658 ----IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713

Query: 428 SAGYFPDSHIIALVL 442
             G   DS ++  ++
Sbjct: 714 DNGCTVDSGMLNFIV 728



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 12/441 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + PD  TY  LI C  + G  D   
Sbjct: 49  SIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGF 107

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 108 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKG 167

Query: 134 FGKAKLFKEARLLIEEM---REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                  +EA  L+  M   R  G  PD VSY+T++N + +     +A S + EM +   
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T N +I    +      A  +  +M K G+ P  ++YN++L  Y  +    EAI 
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   +E +VVTY+ ++    K+    +A  +   M  RG++P   TY T++  + 
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G L     L   +  +G+  D  ++  +I AY + G V  A  +  ++RQ    PN +
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I IL ++GR+E+A   F Q  D G      V+  +I       K+    E+  +M
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 427 RSAGYFPDSHIIALVLNSYGK 447
              G   ++     +++S+ K
Sbjct: 468 LDRGICLNTIFFNSIIDSHCK 488



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 173/383 (45%), Gaps = 49/383 (12%)

Query: 98  LARKLSDYSK-----AISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           L R L+D ++     A+S ++R+  +G   + PDL  Y  +I    +A         +  
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           + ++G + D ++++ LL     + +  +A+                              
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAM------------------------------ 142

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---QRKEIEQNVVT 266
               D +   M ++G  P+V SYN LL+   +     EA+ L  +M   +      +VV+
Sbjct: 143 ----DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I  + K  + +KA +   EM +RGI P+ +TY++IIA   KA  +D+A  +   + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
            +GV  D + Y +++  Y   G    A   L ++R    +P+ +     +  L + GR  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F      G   +I+ +G +++ ++       +  + + M   G  PD ++ ++++
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 443 NSYGKLREFETADDLYSEMQEEG 465
            +Y K  + + A  ++S+M+++G
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQG 401



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 2/194 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I+   K+    +A  +F    S+G+VP+   Y  M
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 131 I-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
             N+ G+  L +E   L   M + G   D+   + ++   ++  +   A +  + ++E +
Sbjct: 693 AENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751

Query: 190 CPLDLTTCNIMIDV 203
             L+ +T ++ ID+
Sbjct: 752 FSLEASTASLFIDL 765


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 225/455 (49%), Gaps = 8/455 (1%)

Query: 19  VFAYNVVLRNVLRAKQWE-LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           V   +++L+ +  AK+ + + + L   M + G+ PD  +Y+T++    ++     A+  L
Sbjct: 154 VIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLL 213

Query: 78  QQM--EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             M  +    S ++V Y+ +I    +  + SKA ++F  +   G+VPD+V Y ++I+   
Sbjct: 214 HTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALC 273

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   +A L++ +M   G +P+ V+Y+ +++ Y  + ++ E   +F EM       ++ 
Sbjct: 274 KARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIV 333

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TCN  +    +   +K+A   F SM   G  P++V+Y+ LL  Y     F + ++LF  M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   I  +   +N +I  YGK    ++   +  +MQ +G+ P+A TY  +IA + + G+L
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRL 453

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNTIPRET 370
             A   F ++ + G++ + ++Y ++I  +   G +  AK L+ E+      +PN +   +
Sbjct: 454 ADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNS 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR+ EA  +F      GE  D+  F  +I+ +    K      V + M SAG
Sbjct: 514 IINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG 573

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD      +++ Y +    +    L+ EM  +G
Sbjct: 574 IEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG 608



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 256/577 (44%), Gaps = 45/577 (7%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + +    SP+V  YN V+  + R  +   A  LF EM Q+G+ PD  TY+++I    K  
Sbjct: 217 VKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKAR 276

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A   L+QM  +    + V Y+ +I        + +   +F  + S G++P++V  N
Sbjct: 277 AMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCN 336

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           + ++   K    KEA    + M  +G KP+ V+YS LL+ Y     FV+ L++F  M   
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGN 396

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D    NI+ID YG+  M  +   +F  M++ G+ P   +Y  ++  +       +A
Sbjct: 397 GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADA 456

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE------------ 296
           +  F  M    ++   + Y+++I+ +       KA  L+ EM +RGI             
Sbjct: 457 MDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIIN 516

Query: 297 ------------------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                                   P+ IT++++I  +G  GK+++A  +   + S+G+E 
Sbjct: 517 SLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP 576

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVF 388
           D V Y T+I  Y R G +     L  E+     +P TI     +  L   GR   A  + 
Sbjct: 577 DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +  ++G   DIS  G ++    RN      I +F+K+ +     +  II  ++++  K+
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKDFNMLESLFERLDSDSNINKK 505
           R+ E A +L+  +   G V +   +  M+      G+ ++ + + SL E+  S    + +
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEK--SGCAPSSR 754

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            L++++  + E+   +   + +     KR +  +S V
Sbjct: 755 LLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTV 791



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 150/322 (46%), Gaps = 7/322 (2%)

Query: 28  NVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
           N+++AK+      L  EM  RGI  P+   ++++I    KEG    A      +      
Sbjct: 487 NLVKAKE------LVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
            D++ +++LI+    +    KA  +   + S+GI PD+V+YNT+I+ + +     +  +L
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
             EM  +GVKP T++Y  +L+    + + V A  +  EM E    +D++TC I++    +
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
            +   +A  +F  +  M +  ++   NT++    +     EA  LF  +    +  N  T
Sbjct: 661 NNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAST 720

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y  MIK   K    E+A N+   M+  G  P++   + II +  + G++ +A     K+ 
Sbjct: 721 YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVD 780

Query: 327 SSGVEIDPVLYQTMIVAYERVG 348
              + ++      ++  + R G
Sbjct: 781 GKRISLEASTVSLLMALFSREG 802



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 140/298 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +N ++ ++ +  +   AH +FD +   G  PD  T+++LI  +G  G  + A   
Sbjct: 506 PNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGV 565

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  D+V Y+ LI+   +       + +F  + S G+ P  + Y  +++    
Sbjct: 566 LDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFN 625

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A+ +  EM E G   D  +   +L     N+   EA+++F ++  +N   ++  
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAI 685

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MID   ++   ++A  LF S+   G+ P+  +Y  +++   +     EA ++F LM+
Sbjct: 686 INTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N +I++  +  E  KA N M ++  + I   A T S ++A++ + GK
Sbjct: 746 KSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGK 803


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 250/538 (46%), Gaps = 10/538 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+  + P V  + +++  + +A  +  A    D MR +GI P+ +TY+TLI    +    
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+     ME   V      Y   I+   K  D   A+  F ++K+ GI P++VA N  
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    KA   +EA+ +   +++ G+ PD+V+Y+ ++  Y +  +  EA+ + +EM E  C
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+   N +I+   + D   +A ++F  M++M + P+VV+YNTLL   G+     EAI 
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M +K    N +T+NT+     K+ E   A  ++ +M + G  P+  TY+TII    
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNT 365
           K G++  A   F +++   V  D V   T++    +  L+  A +++         QP  
Sbjct: 655 KNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713

Query: 366 IPRETAI-TILARAGRIEEATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVF 423
           +  E  I +ILA AG I+ A     +    G  +D  S+   +I    ++   +    +F
Sbjct: 714 LFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772

Query: 424 EKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           EK  +  G  P      L++    +    E A D++ +++  GC+     +  +L  YG 
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSS 540
               + L  L++ + +         H++V     +A  ++DA  +   +   R F+ +
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 211/454 (46%), Gaps = 4/454 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + ++YN ++  +L+++    A  ++  M   G  P   TYS+L+   GK    DS +  L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++ME   +  ++  ++  I +  +    ++A  I  R+   G  PD+V Y  +I+    A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +    A+ + E+M+    KPD V+Y TLL+ + +N         ++EM +     D+ T 
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I++D   +     +A      MR  GI P++ +YNTL+          +A+ LF  M+ 
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++    TY   I  YGKS +   A    ++M+ +GI PN +  +  +    KAG+   
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  +F  L+  G+  D V Y  M+  Y +VG +  A +LL E+     +P+ I   + I 
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L +A R++EA  +F +  +      +  +  ++    +N K    IE+FE M   G  P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           ++     + +   K  E   A  +  +M + GCV
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 5/442 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ + + +R + RA +   A+ +   M   G  PD  TY+ LI         D A   
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M+  R   D V Y  L++      D       +S ++  G VPD+V +  +++   K
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F EA   ++ MR+QG+ P+  +Y+TL+   +  H+  +AL +F  M  +       T
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             + ID YG+   +  A   F  M+  GI P++V+ N  L    +A    EA  +F  ++
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  + VTYN M+K Y K  E ++A  L+ EM   G EP+ I  +++I    KA ++D
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +F +++   ++   V Y T++    + G +  A  L   + Q    PNTI   T  
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +  A  +  +  D G V D+  +  +I    +N +    +  F +M+   Y 
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY- 674

Query: 433 PDSHIIALVLNSYGKLREFETA 454
           PD   +  +L    K    E A
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDA 696



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 211/448 (47%), Gaps = 17/448 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS+  Y+ ++  + + +  +   GL  EM   G+ P+ YT++  I   G+ G  + A 
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             L++M+ +    D+V Y+ LI+    ARKL D +K   +F ++K+    PD V Y T++
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKL-DCAK--EVFEKMKTGRHKPDRVTYITLL 335

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F   +     +    EM + G  PD V+++ L++   +   F EA      M +    
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +L T N +I    ++    DA  LF +M  +G+ P+  +Y   +  YG++     A+  
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+ K I  N+V  N  +    K+    +A  +   +++ G+ P+++TY+ ++  + K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G++D A  L  ++  +G E D ++  ++I    +   V  A ++   +++    P  + 
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +  L + G+I+EA  +F      G   +   F  + +   +N +    +++  KM 
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635

Query: 428 SAGYFPD-----SHIIALVLNSYGKLRE 450
             G  PD     + I  LV N  G+++E
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKN--GQVKE 661



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 209/499 (41%), Gaps = 45/499 (9%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E +  P+V  YN +L  + +  + + A  LF+ M Q+G  P+  T++TL  C  K    
Sbjct: 565  KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A+  L +M       D+  Y+ +I    K     +A+  F ++K   + PD V   T+
Sbjct: 625  TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 683

Query: 131  INVFGKAKLFKEARLLI------------------------------------EEMREQG 154
            +    KA L ++A  +I                                    E +   G
Sbjct: 684  LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743

Query: 155  VKPDTVSYSTLLNLYVENHKFVEALSVFAE--MNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            +  D  S    +  Y   H  V       E    ++     L T N++I    + DM + 
Sbjct: 744  ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A  +F  ++  G  P V +YN LL  YG++    E   L++ M   E E N +T+N +I 
Sbjct: 804  AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863

Query: 273  IYGKSLEHEKATNLMQE-MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               K+   + A +L  + M +R   P A TY  +I    K+G+L  A  LF+ +   G  
Sbjct: 864  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923

Query: 332  IDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWV 387
             +  +Y  +I  + + G      A  KR++ E  +P+       +  L   GR++E    
Sbjct: 924  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GYFPDSHIIALVLNSYG 446
            F++  ++G   D+  +  +I    ++ +    + +F +M+++ G  PD +    ++ + G
Sbjct: 984  FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043

Query: 447  KLREFETADDLYSEMQEEG 465
                 E A  +Y+E+Q  G
Sbjct: 1044 IAGMVEEAGKIYNEIQRAG 1062



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 202/439 (46%), Gaps = 11/439 (2%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
            K  E+A+ +FD M++R I  D  TY T+      +G    A   L++M +     +   
Sbjct: 132 GKLEEMAY-VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ LI L  K    ++A+ ++ R+   G  P L  Y++++   GK +       L++EM 
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG---QLD 208
             G+KP+  +++  + +     K  EA  +   M++  C  D+ T  ++ID      +LD
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
            AK+   +F  M+     P  V+Y TLL  + +          +  M++     +VVT+ 
Sbjct: 311 CAKE---VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            ++    K+    +A + +  M+++GI PN  TY+T+I    +  +LD A  LF  + S 
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
           GV+     Y   I  Y + G    A     +++     PN +    ++  LA+AGR  EA
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +F    D G V D   +  M++ +S+  +    I++  +M   G  PD  ++  ++N+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547

Query: 445 YGKLREFETADDLYSEMQE 463
             K    + A  ++  M+E
Sbjct: 548 LYKADRVDEAWKMFMRMKE 566



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 204/464 (43%), Gaps = 47/464 (10%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK---------- 66
            P VF YN ++  +++  Q + A   F +M++  + PD  T  TL+    K          
Sbjct: 641  PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699

Query: 67   --------------------------EGMFDSAISWLQQMEQDRVS--GDLVLYSNLIEL 98
                                      E   D+A+S+ +++  + +   GD +L   +I  
Sbjct: 700  ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRY 758

Query: 99   ARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            + K ++ S A ++F +  K  G+ P L  YN +I    +A + + A+ +  +++  G  P
Sbjct: 759  SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818

Query: 158  DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
            D  +Y+ LL+ Y ++ K  E   ++ EM+   C  +  T NI+I    +     DA  L+
Sbjct: 819  DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878

Query: 218  WS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            +  M      P+  +Y  L+    ++    EA  LF  M       N   YN +I  +GK
Sbjct: 879  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            + E + A  L + M   G+ P+  TYS ++      G++D     F++L+ SG+  D V 
Sbjct: 939  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998

Query: 337  YQTMIVAYERVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y  +I    +   +  A  L +E++      P+     + I  L  AG +EEA  ++ + 
Sbjct: 999  YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              AG   ++  F  +I  +S + K  +   V++ M + G+ P++
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P +  YN+++  +L A   E+A  +F +++  G  PD  TY+ L+  +GK G  D     
Sbjct: 783  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
             ++M       + + ++ +I    K  +   A+ ++  L S     P    Y  +I+   
Sbjct: 843  YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K+    EA+ L E M + G +P+   Y+ L+N + +  +   A ++F  M +     DL 
Sbjct: 903  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T ++++D    +    +    F  +++ G++P VV YN ++   G++    EA+ LF  M
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 256  Q-RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +  + I  ++ TYN++I   G +   E+A  +  E+Q  G+EPN  T++ +I  +  +GK
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTM 340
             + A  ++Q + + G   +   Y+ +
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 131/560 (23%), Positives = 235/560 (41%), Gaps = 83/560 (14%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN ++  +LR  + + A  LF  M   G+ P  YTY   I  +GK G   SA+  
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455

Query: 77  LQQMEQDRVSGDLV-LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            ++M+   ++ ++V   ++L  LA+   D  +A  IF  LK  G+VPD V YN M+  + 
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRD-REAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514

Query: 136 KAKLFKEARLLIEEMREQGVKPDT-----------------------------------V 160
           K     EA  L+ EM E G +PD                                    V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+TLL    +N K  EA+ +F  M +  CP +  T N + D   + D    A ++ + M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             MG  P V +YNT++    +     EA+  F  M +K +  + VT  T++    K+   
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLI 693

Query: 281 EKATNLMQE-MQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           E A  ++   + N   +P  + +  +I +I  +AG +D A    ++L ++G+  D     
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDSIL 752

Query: 339 TMIVAYE-RVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
             I+ Y  +   V+ A+ L  +       QP        I  L  A  IE A  VF Q  
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS-------------------AG--- 430
             G + D++ +  +++ + ++ K   + E++++M +                   AG   
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872

Query: 431 --------------YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
                         + P +     +++   K      A  L+  M + GC  +  ++  +
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932

Query: 477 LSLYGARKDFNMLESLFERL 496
           ++ +G   + +   +LF+R+
Sbjct: 933 INGFGKAGEADAACALFKRM 952



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 38/258 (14%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            +SP+   Y  ++  + ++ +   A  LF+ M   G  P+   Y+ LI  FGK G  D+A 
Sbjct: 887  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  ++M ++ V  DL  YS L++    +    + +  F  LK SG+ PD+V YN +IN  
Sbjct: 947  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006

Query: 135  GKAKLFKEARLLIEEMR-EQGVKPDTVSYSTL-LNLYVENHKFVEALSVFAEMNEVNCPL 192
            GK+   +EA +L  EM+  +G+ PD  +Y++L LNL                        
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL------------------------ 1042

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
                        G   M ++A +++  +++ G++P+V ++N L+R Y  +     A  ++
Sbjct: 1043 ------------GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090

Query: 253  RLMQRKEIEQNVVTYNTM 270
            + M       N  TY  +
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 240/521 (46%), Gaps = 55/521 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG---------- 65
           +P +F +  +L ++++   ++ A  L  EM   GIA D  T++ LI CF           
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 66  ------KEGMFDSAISWLQQMEQDRVSGDL-------------------VLYSNLIELAR 100
                 K+G   +AI+    ++   + G +                   V Y  LI    
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K+   S A+ +  R+    + P++V YNT+I+   K KL  EA  L  EM  +G+ PD V
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232

Query: 161 SYSTLLNLYVENHKFVEALSVFAEM--NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           +YS L++ +    K  +A+ +F +M   E+N P D+ T +I++D + +    K+A  +  
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEIN-P-DVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M K GI P VV+Y +L+  Y   +   +A  +F  M +  +  NV +YN MI  + K  
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++A NL +EM  + I P+ +TY+++I    K+GK+  A  L  ++   GV  D + Y 
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYN 410

Query: 339 TMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           +++ A  +   V  A  LL +++    QP+       I  L + GR+++A  +F      
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    +  +  MI+ F  N  +   + +  KM   G  P++    +++ S  +  E + A
Sbjct: 471 GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMA 530

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           + L  EM   G +F            G +K + +    F+R
Sbjct: 531 EKLLREMIARGLLF------------GWKKAYCLFTRFFQR 559



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/481 (20%), Positives = 217/481 (45%), Gaps = 5/481 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ +      P  + +  ++    K   + +AIS  ++ME + ++ DLV ++ LI    +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L     + S+F+ +   G  P+ +   T+I          +A    +++   G   + V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +  +   AL +   ++      ++   N +ID   ++ +  +A  L+  M 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P VV+Y+ L+  +       +AI LF  M  +EI  +V T++ ++  + K    +
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A N++  M  +GI+P+ +TY +++  +    ++++A  +F  +   GV  +   Y  MI
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + ++  V  A  L  E+   N IP      + I  L ++G+I  A  +  +  D G  
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D   +  +++   +N +    I +  KM+  G  PD +   ++++   K    + A ++
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYE 516
           + ++  +G   +   +  M+  +     F+   +L  +++ +  I N K    ++  ++E
Sbjct: 464 FEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFE 523

Query: 517 R 517
           +
Sbjct: 524 K 524



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 12/370 (3%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D    +S F+R+ +    P +  +  ++    K   ++ A  L  EM   G+  D V+++
Sbjct: 36  DEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFN 95

Query: 164 TLLNLYVENHKFVEALSVFAEM----NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            L+N + +      + SVFA +     E N  + LTT    + + GQ+  A         
Sbjct: 96  ILINCFSQLGHTHFSFSVFANILKKGYEPN-AITLTTLIKGLCLKGQIHQAL---HFHDK 151

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +  +G   + V Y TL+    +      A+ L R +  K ++ NVV YNT+I    K   
Sbjct: 152 VVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A +L  EM ++GI P+ +TYS +I+ +   GKL+ A  LF K+ S  +  D   +  
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  + + G V  AK +L  +     +P+ +   + +       ++ +A  +F      G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  +  MI  F + KK    + +F++M      PD      +++   K  +   A 
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391

Query: 456 DLYSEMQEEG 465
            L  EM + G
Sbjct: 392 KLVDEMHDRG 401



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 145/323 (44%), Gaps = 10/323 (3%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P +  +  +L    +   +  AI L R M+   I  ++VT+N +I  + +      + ++
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              +  +G EPNAIT +T+I      G++ +A     K+ + G  ++ V Y T+I    +
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 347 VGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           VG  + A +LL     +L QPN +   T I  + +   + EA  ++ +    G   D+  
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I  F    K  + I +F KM S    PD +  +++++ + K    + A ++ + M 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
           ++G       +  ++  Y   K  N  +S+F  +         + ++++   + +  +++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 523 DASRIMNRMNKRR------TFNS 539
           +A  +   M+ +       T+NS
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNS 376


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 214/455 (47%), Gaps = 6/455 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +++   W  E+A +   VF YN ++  ++  K +   + + +EM + GIAP+ ++++ LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F +    D A++  + M++ R   DL  +  L++   K     KA  +F  + + G V
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 122 P-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           P D   +  M+    KAK  KEAR +  +M + G  PD ++Y+T+++   +     EAL 
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V   M    C     T  I+++   +    + A+ LF  M   G  P+ V Y +L+  + 
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           ++    EA  LF  M       +V+T+  MI    KS   E+A    +EM   G +PN +
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII    K G++  A  + + + + G   D V Y  ++  + ++G +  A +LL EL
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 361 RQPNTIPR----ETAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            + ++ P      + +  L   G +E     +F Q+  A E  D  +   +I    +  +
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                 +F++M S G  PD+    +++N   + RE
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 206/498 (41%), Gaps = 43/498 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+  + P   AYN ++  + +A   + A  + D M  +   P   TY  L+    K G  
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    + M       + V+Y++LI    K     +A S+F  +  +G  PD++ +  M
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K+  F++A    EEM   G KP+ V+Y+T++    +  +   A  +   M    C
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGC 431

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
             D  T   ++D + +L    +A +L   + K    P++  Y++L++   +         
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLD 491

Query: 243 ELF----------------------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +LF                             EA  +F+ M  +  + +  TYN +I   
Sbjct: 492 DLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551

Query: 275 GKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +S E+  E+A  L+ +++  G  P+A+TY+ +     K G++DRA  + ++  S G   
Sbjct: 552 CRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNA 611

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVF 388
           D V Y  +       G V  A  L  E+ +    P   A    I  L +  ++E+A   F
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFF 671

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGK 447
            +    G+   ++ +  +++              FE M + G    S +I   +++ + K
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCK 731

Query: 448 LREFETADDLYSEMQEEG 465
             + + A  L+ +M   G
Sbjct: 732 ALKVDAALKLFEDMISRG 749



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 207/481 (43%), Gaps = 71/481 (14%)

Query: 90  VLYSNLIELARKLSDYSKAISIFS-RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           VL S++  + R L     AIS F    + +G   D+  YN ++N+    K + +   + E
Sbjct: 84  VLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHE 143

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM + G+ P+T S++ L+  +    +  +A++ F  M    C  DL T  I++D   +  
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203

Query: 209 MAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           M + A  +F  M  MG + P    +  ++R   +A+   EA  +F  M++     + + Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NTMI    K+   ++A  ++  M  +   P  +TY  ++    KAG L+RA  LF+ + +
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWV 387
           SG   + V+Y ++I  +                               A++GR++EA  +
Sbjct: 324 SGFRPNSVIYTSLIHGF-------------------------------AKSGRMKEACSL 352

Query: 388 FRQAFDAGEVKDISVF--------------------------GC---------MIELFSR 412
           F +  +AG   D+                             GC         +I+  S+
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
             + AN   + + M + G FPDS     +L+ + KL   + A  L  E+ +     + Q+
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 473 HFQML-SLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNR 530
           +  ++  L       N L+ LFE+  + + N++      ++ G+  +  RL++A RI  R
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC-KTGRLDEACRIFQR 531

Query: 531 M 531
           M
Sbjct: 532 M 532



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 38/308 (12%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAISWLQQMEQ 82
           ++  + +  + + A  +F  M   G  PD  TY+ LI   C  +E   + A + L  +E 
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D V Y+ L     K+ +  +A+ +     S G   D+VAY  +            
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L +EM  QG  PD  +Y  ++N  ++  K                            
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL--------------------------- 664

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-LMQRKEIE 261
                   +DA + F  M   G  P+V +Y  L++    A    EA H F  ++ R E+ 
Sbjct: 665 --------EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELV 716

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V+ Y+ +I  + K+L+ + A  L ++M +RG  P A+T +++     ++GK ++A  L
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776

Query: 322 FQKLRSSG 329
            Q++ + G
Sbjct: 777 LQEMAAGG 784



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 117/292 (40%), Gaps = 36/292 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQ--WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P    YN+++  + R+++   E A  L  ++   G  PD  TY+ L     K G  D A+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++      + D+V Y+ L           +A+S+F  +   G  PD  AY  +IN  
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K  ++A    +EM  +G KP   +Y+ L+          EA   F  M         
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM--------- 709

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                                    + +  +  SV+ Y+ L+  + +A     A+ LF  
Sbjct: 710 -------------------------LARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           M  +      VT  ++     +S + EKA  L+QEM   G  P+A T++ I+
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 158/401 (39%), Gaps = 45/401 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  +++ + +  +   A  +   M   G  PD  TY  L+  F K G  D A   
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457

Query: 77  LQQMEQDRVSGDLVLYSNLIE-------LARKLSDY------------------------ 105
           L ++++   S +L LYS+L++       +   L D                         
Sbjct: 458 LDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC 517

Query: 106 -----SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK--LFKEARLLIEEMREQGVKPD 158
                 +A  IF R+ S G  PD   YN +IN   +++    + A  L+ ++   G  PD
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL---TTCNIMIDVYGQLDMAKDADR 215
            V+Y+ L     +  +   A+ +  E +      D+   T     +   GQ+D A     
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS--- 634

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  M + G  P   +Y  ++    + +   +A   F  M  K  +  V TY  +++   
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 276 KSLEHEKATNLMQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            +   ++A +  + M  RG +  + + Y  +I  + KA K+D A  LF+ + S G     
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           V   ++     R G    A+ LL E+    + P     T +
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 250/562 (44%), Gaps = 41/562 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP+V AYN V+    +      A  LF EM QRGI PD  TY++++    K    D 
Sbjct: 213 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 272

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM   RV  +   Y+NLI        + +A+ +F  ++   I+PD+V  + ++ 
Sbjct: 273 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M       
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR------------------- 293
             M  + +  +   YN +I+ +       KA  L+ E+ N                    
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512

Query: 294 ----------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G+ P+A+ YS ++  +   GK+++A  +F  + S+G+E + V+Y
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 572

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L +AGR   A   F +  +
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   DI  +  ++    +N+ +   I +F+++R+     +   +  +++   + R  E 
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVA 512
           A DL++ +     V S   +  M++           E +F  + ++    N + L+HVV 
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            + ++ N +  A   ++++++R
Sbjct: 753 ELLKK-NEIVRAGAYLSKIDER 773



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 6/423 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYS 106
           G  PD ++YS L+     +G    A   L+ M +     S ++V Y+ +I+   K  D +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           KA  +F  +   GI PDLV YN++++   KA+   +A   + +M  + V P+  +Y+ L+
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             Y    ++ EA+ VF EM   +   D+ T ++++    +    K+A  +F +M   G +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P V SYN +L  Y       +   LF LM    I  +  T+N +IK Y      +KA  +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 416

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             EM++ G++P+ +TY T+IA   + GK+D A   F ++   GV  D   Y  +I  +  
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476

Query: 347 VGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            G +  AK L+ E+       + +   + I  L + GR+ +A  +F    + G   D  V
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 536

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +++ +    K    + VF+ M SAG  P+  +   ++N Y K+   +    L+ EM 
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596

Query: 463 EEG 465
           + G
Sbjct: 597 QRG 599



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 91/193 (47%), Gaps = 35/193 (18%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  +  +  YN+VLR + + + ++ A  LF E+R   +  +  T +T+I     +GMF 
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI-----DGMFQ 686

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +     +++E+                         A  +F+ +  S +VP +V Y+ MI
Sbjct: 687 T-----RRVEE-------------------------AKDLFASISRSRLVPSVVTYSIMI 716

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K  L +EA  +   M+  G +P++   + ++   ++ ++ V A +  ++++E N  
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776

Query: 192 LDLTTCNIMIDVY 204
           L+  T  +++D++
Sbjct: 777 LEHLTTMLLVDLF 789


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 253/545 (46%), Gaps = 28/545 (5%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R SP+V+ YN+++R      + +   G F EM + G  P+  TY+TLI  + K G  D 
Sbjct: 4   SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 63

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L+ M    +  +L+ Y+ +I    +     +A  I   +   G  PD V YNT++N
Sbjct: 64  AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 123

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            + K   F +A ++  EM   GV P  V+Y+ L+N   +      A+  F +M       
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +ID + +  +  +A R+   M + G  PSVV+YN  +  +   E   EA+ + 
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  K +  +VV+Y+T+I  + +  E ++A  + QEM  +G+ P+A+TYS++I    + 
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPR 368
            +L  A  L Q++   G+  D   Y T+I AY   G +  A  L    +H+   P+ +  
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363

Query: 369 ETAITILARAGRIEEAT-WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI------- 420
              I  L +  R  EA   +F+  ++     D++ +  +IE  S N ++ +V+       
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVT-YDTLIENCS-NIEFKSVVALIKGFC 421

Query: 421 ---------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
                     VFE M    + P   +  ++++ + +      A +LY EM   G V    
Sbjct: 422 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481

Query: 472 VHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN---DASRI 527
               ++ +L+    +  M E + + L S   +N+ EL  V+  I  +   +    + SR+
Sbjct: 482 TVITLIKALFKEGMNEEMSEVIGDTLRS-CRLNEAELAKVLVEINHKEGNMEAVLNVSRL 540

Query: 528 MNRMN 532
            N+++
Sbjct: 541 YNKLS 545



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 180/395 (45%), Gaps = 4/395 (1%)

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M + RVS ++  Y+ LI     + +  K +  F  ++ +G +P++V YNT+I+ + K   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA  L++ M  +G++P+ +SY+ ++N         EA  +  EM       D  T N 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +++ Y +      A  +   M + G+ PSVV+Y  L+    +A     A+  F  M+ + 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  N  TY T+I  + +     +A  ++ EM   G  P+ +TY+  I       +++ A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            + Q++   G+  D V Y T+I  + R G +  A ++  E+ +    P+ +   + I  L
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
               R+ EA  + ++  D G   D   +  +I  +         + + ++M   G+ PD+
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
              ++++N   K      A  L  ++  E  V SD
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 15/276 (5%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+ +SPSV  YN  +      ++ E A G+  EM ++G+APD  +YST+I+ F ++G  D
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    Q+M +  VS D V YS+LI+   ++   ++A  +   +   G+ PD   Y T+I
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS-VFAEMNEVNC 190
           N +       +A  L +EM  +G  PD V+YS L+N   +  +  EA   +F  + E + 
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392

Query: 191 PLDLT------TC-NI-------MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           P D+T       C NI       +I  +    +  +ADR+F SM +    P    YN ++
Sbjct: 393 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
             +       +A +L++ M       + VT  T+IK
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 488



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 40/252 (15%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PN  TY+ +I  +   G+L +    F ++  +G   + V Y T+I AY ++G +  A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            LL  +     QPN I     I  L R G ++EA W                        
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA-W------------------------ 100

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                     E+ E+M   G+ PD      +LN Y K   F  A  +++EM   G   S 
Sbjct: 101 ----------EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 150

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
             +  +++     ++ N     F+++        +  +  +   + R   LN+A RI+N 
Sbjct: 151 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 210

Query: 531 MNKRRTFNSSLV 542
           M +   F+ S+V
Sbjct: 211 MTE-SGFSPSVV 221


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 222/457 (48%), Gaps = 5/457 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-MFDS 72
           +YS  V AY  +L +  R  +++ A  LF +M++ G+ P   TY+ ++  +GK G  +D 
Sbjct: 210 KYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDR 269

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +  L +M    +  D    S +I    +     +A    + LK +G  P  V YN+M+ 
Sbjct: 270 ILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQ 329

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           VFGKA ++ EA  +++EM +    PD+V+Y+ L   YV      E ++V   M       
Sbjct: 330 VFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMP 389

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +ID YG+     DA RLF  M+ +G  P+V +YN++L + G+     + I + 
Sbjct: 390 NAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 449

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+      N  T+NTM+ +  +  +H     +++EM+N G EP+  T++T+I+ + + 
Sbjct: 450 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARC 509

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G    +A ++ ++  SG       Y  ++ A  R G    A+ ++ ++R     P E + 
Sbjct: 510 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSY 569

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           ++L    ++AG ++    V ++ +D        +   ++    + +    +   F++++ 
Sbjct: 570 SLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQK 629

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            GY PD  +I  +L+ + + + F  A ++   + E G
Sbjct: 630 YGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECG 666



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 217/460 (47%), Gaps = 5/460 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           +E    P++  YNV+L    +  + W+    L DEMR +G+  D +T ST+I+  G+EGM
Sbjct: 242 KEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGM 301

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A  +L +++ +      V Y++++++  K   Y++A+SI   ++ +   PD V YN 
Sbjct: 302 LDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNE 361

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +   + +A    E   +I+ M  +GV P+ ++Y+T+++ Y +  +  +AL +F+ M ++ 
Sbjct: 362 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLG 421

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T N ++ + G+    +D  ++   M+  G  P+  ++NT+L V  E        
Sbjct: 422 CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVN 481

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            + R M+    E +  T+NT+I  Y +      +  +  EM   G  P   TY+ ++   
Sbjct: 482 KVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNAL 541

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G    A  + Q +R+ G + +   Y  ++  Y + G V   +++  E+   +  P  
Sbjct: 542 ARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSW 601

Query: 370 TAITILARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
             +  L              +AFD     G   D+ V   M+ +F+RNK ++   E+   
Sbjct: 602 ILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHF 661

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +   G  P+      +++ Y +  E   A+++   +Q  G
Sbjct: 662 IHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 230/469 (49%), Gaps = 5/469 (1%)

Query: 24  VVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
           +++R + R  Q  +A  LFD +     + D   Y+T++  + + G +  AI    +M++ 
Sbjct: 185 LMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEI 244

Query: 84  RVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
            +   LV Y+ ++++  K+   + + + +   ++S G+  D    +T+I+  G+  +  E
Sbjct: 245 GLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDE 304

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           AR  + E++  G KP TV+Y+++L ++ +   + EALS+  EM + NCP D  T N +  
Sbjct: 305 ARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAA 364

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            Y +     +   +  +M   G+ P+ ++Y T++  YG+A    +A+ LF LM+      
Sbjct: 365 TYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAP 424

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NV TYN+++ + GK    E    ++ EM+  G  PN  T++T++A+  + GK +    + 
Sbjct: 425 NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 484

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARA 378
           +++++ G E D   + T+I AY R G    + ++  E+ +    P  T     +  LAR 
Sbjct: 485 REMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARR 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G  + A  V +     G   + + +  ++  +S+      + +V +++     FP   ++
Sbjct: 545 GDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILL 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             ++ +  K R     +  + ++Q+ G      V   MLS++   K F+
Sbjct: 605 RTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFS 653



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 195/403 (48%), Gaps = 5/403 (1%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++ +  + S +S A  +F  +       D+ AY T+++ + +   +K A  L  +M+E G
Sbjct: 186 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIG 245

Query: 155 VKPDTVSYSTLLNLYVE-NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           + P  V+Y+ +L++Y +    +   L +  EM      LD  TC+ +I   G+  M  +A
Sbjct: 246 LDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEA 305

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            +    ++  G  P  V+YN++L+V+G+A ++ EA+ + + M+      + VTYN +   
Sbjct: 306 RKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAAT 365

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y ++   ++   ++  M ++G+ PNAITY+T+I  +GKAG+ D A  LF  ++  G   +
Sbjct: 366 YVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPN 425

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFR 389
              Y +++    +        ++L E++     PN     T + + +  G+      V R
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR 485

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  + G   D   F  +I  ++R     +  +++ +M  +G+ P       +LN+  +  
Sbjct: 486 EMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRG 545

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           +++ A+ +  +M+ +G   ++  +  +L  Y    +   +E +
Sbjct: 546 DWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKV 588



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 179/373 (47%), Gaps = 4/373 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ YN VL  + +  + E    +  EM+  G AP+R T++T++    +EG  +    
Sbjct: 423 APNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNK 482

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M+      D   ++ LI    +      +  ++  +  SG  P +  YN ++N   
Sbjct: 483 VLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALA 542

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   +K A  +I++MR +G KP+  SYS LL+ Y +         V  E+ + +      
Sbjct: 543 RRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWI 602

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               ++    +    +  +R F  ++K G  P +V  N++L ++   ++F +A  +   +
Sbjct: 603 LLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFI 662

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               ++ N+ TYN ++ +Y +  E  KA  +++ +QN G EP+ ++Y+T+I  + + G +
Sbjct: 663 HECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLM 722

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +  ++ + G++   V Y T +  Y  + L   A  ++  + + N  P E    IL
Sbjct: 723 QEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKIL 782

Query: 376 ----ARAGRIEEA 384
                +AG+ EEA
Sbjct: 783 VDGYCKAGKYEEA 795



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 193/417 (46%), Gaps = 9/417 (2%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M+ + G+      A  L + +  +    D  +Y+T+L+ Y    K+  A+ +F +M E+ 
Sbjct: 186 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIG 245

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
               L T N+M+DVYG+  M +  DR   L   MR  G++    + +T++   G   +  
Sbjct: 246 LDPTLVTYNVMLDVYGK--MGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLD 303

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA      ++    +   VTYN+M++++GK+  + +A ++++EM++    P+++TY+ + 
Sbjct: 304 EARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELA 363

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
           A + +AG LD    +   + S GV  + + Y T+I AY + G    A RL   ++     
Sbjct: 364 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCA 423

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN     + + +L +  R E+   V  +    G   + + +  M+ + S   K+  V +V
Sbjct: 424 PNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV 483

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M++ G+ PD      ++++Y +      +  +Y EM + G       +  +L+    
Sbjct: 484 LREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR 543

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
           R D+   ES+ + + +      +  + ++   Y +A  +    ++   +     F S
Sbjct: 544 RGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPS 600



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 146/322 (45%), Gaps = 35/322 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++ ++P V  YN +L  + R   W+ A  +  +MR +G  P+  +YS L+ C+ K G   
Sbjct: 524 KSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAG--- 580

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  ++++E++   G                                + P  +   T++
Sbjct: 581 -NVKGIEKVEKEIYDGH-------------------------------VFPSWILLRTLV 608

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K +  +      +++++ G KPD V  +++L+++  N  F +A  +   ++E    
Sbjct: 609 LTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQ 668

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +L T N ++D+Y +      A+ +   ++  G +P VVSYNT+++ +    L  EAI +
Sbjct: 669 PNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGV 728

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K I+  +VTYNT +  Y      ++A  +++ M      P+ +TY  ++  + K
Sbjct: 729 LSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCK 788

Query: 312 AGKLDRAAMLFQKLRSSGVEID 333
           AGK + A     K++   +  D
Sbjct: 789 AGKYEEAMDFVSKIKELDISFD 810


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 227/457 (49%), Gaps = 9/457 (1%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P+VF+YN++L+ +    R+++  EL H + D+ R  G  PD  +Y+T+I  F KEG  D 
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M    +  D+V Y+++I    K     KA+ + + +  +G++PD + YN++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +  +   KEA   +++MR  GV+PD V+YS L++   +N + +EA  +F  M +     
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++TT   ++  Y       +   L   M + GI P    ++ L+  Y       +A+ +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+++ +  N VTY  +I I  KS   E A    ++M + G+ P  I Y+++I      
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            K +RA  L  ++   G+ ++ + + ++I ++ + G V  +++L   +     +PN I  
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I     AG+++EA  +       G   +   +  +I  + +  +  + + +F++M S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +G  PD     ++L    + R    A +LY  + E G
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 205/435 (47%), Gaps = 14/435 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y++++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  D  ++S LI          +A+ +FS+++  G+ P+ V Y  +I +  K
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A L  E+M ++G+ P  + Y++L++     +K+  A  +  EM +    L+   
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P+V++YNTL+  Y  A    EA+ L   M 
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N VTY+T+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------RQPNTIP 367
            A  L+ ++  SG +I+   Y  ++    +  L   A ++   L         R  N + 
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM- 657

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + GR +EA  +F      G V +   +  M E          + ++F  M 
Sbjct: 658 ----IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713

Query: 428 SAGYFPDSHIIALVL 442
             G   DS ++  ++
Sbjct: 714 DNGCTVDSGMLNFIV 728



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 195/441 (44%), Gaps = 12/441 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + PD  TY  LI C  + G  D   
Sbjct: 49  SIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGF 107

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 108 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKG 167

Query: 134 FGKAKLFKEARLLIEEM---REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                  +EA  L+  M   R  G  PD VSY+T++N + +     +A S + EM +   
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T N +I    +      A  +  +M K G+ P  ++YN++L  Y  +    EAI 
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             + M+   +E +VVTY+ ++    K+    +A  +   M  RG++P   TY T++  + 
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G L     L   +  +G+  D  ++  +I AY   G V  A  +  ++RQ    PN +
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAV 407

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I IL ++GR+E+A   F Q  D G      V+  +I       K+    E+  +M
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 427 RSAGYFPDSHIIALVLNSYGK 447
              G   ++     +++S+ K
Sbjct: 468 LDRGICLNTIFFNSIIDSHCK 488



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 172/383 (44%), Gaps = 49/383 (12%)

Query: 98  LARKLSDYSK-----AISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           L R L+D ++     A+S ++R+  +G   + PDL  Y  +I    +A         +  
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           + ++G + D ++++ LL     + +  +A+                              
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAM------------------------------ 142

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---QRKEIEQNVVT 266
               D +   M ++G  P+V SYN LL+   +     EA+ L  +M   +      +VV+
Sbjct: 143 ----DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I  + K  + +KA +   EM +RGI P+ +TY++IIA   KA  +D+A  +   + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
            +GV  D + Y +++  Y   G    A   L ++R    +P+ +     +  L + GR  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F      G   +I+ +G +++ ++       +  + + M   G  PD ++ ++++
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 443 NSYGKLREFETADDLYSEMQEEG 465
            +Y    + + A  ++S+M+++G
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQG 401



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632

Query: 71  DSAISWLQQMEQDRVSGDLVL----YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           D A+    QM Q+    DL L    ++ +I+   K+    +A  +F    S+G+VP+   
Sbjct: 633 DDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 127 YNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           Y  M  N+ G+  L +E   L   M + G   D+   + ++   ++  +   A +  + +
Sbjct: 689 YRLMAENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747

Query: 186 NEVNCPLDLTTCNIMIDV 203
           +E +  L+ +T ++ ID+
Sbjct: 748 DEKHFSLEASTASLFIDL 765


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 206/427 (48%), Gaps = 4/427 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +  ++  + +  ++  A  LFD+M  RG  PD YTY+T+I    K G    A   
Sbjct: 43  PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ME+     ++V YS LI    K    ++A+ IFS +K+  I P +  Y ++I     
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  L+ EM    + P+ V+++ L++ + +  K + A  V   M E+    D+ T
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++  Y       +A +LF  M   G  P V SY+ L+  Y +A+   EA  LF  M 
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +    N V+YNT+I    +     +A +L + M   G  PN  TY+ ++  + K G L 
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+ ++S+ ++ + V+Y  ++ A  + G +  A+ L  EL     QPN     T I
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G ++EA   FR   D G   D   +  +I  F ++K  +  + +  +MR  G+ 
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462

Query: 433 PDSHIIA 439
            D+   A
Sbjct: 463 TDAGTTA 469



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 222/459 (48%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP+    N+++    + ++ +L   +  +  + G+ P   T++TLI   GK G F
Sbjct: 2   ELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKF 61

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+     M       D   Y+ +I    K+ + + A  +F +++ +G   ++V Y+T+
Sbjct: 62  AQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K +   EA  +   M+ + + P   +Y++L+       ++ EA ++  EM  +N 
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T N+++D + +      A+ +  +M +MG++P VV+YN+L+  Y       EA  
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF +M  K  + +V +Y+ +I  Y K+   ++A  L  EM ++G  PN ++Y+T+I    
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           + G+L  A  LF+ + ++G   +   Y  ++  + + G +  A RL   ++    +PN +
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +  + ++G +++A  +F + F  G   ++ ++  +I    +       +E F  M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              G  PD     +++  + + ++   A  L  EM++ G
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 195/426 (45%), Gaps = 4/426 (0%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M   G++P+  T + LI CF +    D   S L +  +  +   +V ++ LI    K+  
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +++A+ +F  + + G  PD   Y T+IN   K      A  L ++M E G + + V+YST
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++   +  +  EAL +F+ M   +    + T   +I         K+A  L   M  + 
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P+VV++N L+  + +      A  + + M    +E +VVTYN+++  Y    E  +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L   M  +G +P+  +YS +I  + KA ++D A  LF ++   G   + V Y T+I   
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDI 400
            ++G +  A+ L   +     +P      IL     + G + +A  +FR         ++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            ++  ++    ++    +  E+F ++   G  P+  I   ++N   K    + A + +  
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 461 MQEEGC 466
           M+++GC
Sbjct: 421 MEDDGC 426


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 229/456 (50%), Gaps = 11/456 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV AYN ++R  + A+  + A    +EM   GI P+  T+S +I+ +G  G  ++A  W 
Sbjct: 157 SVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWF 216

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q+   +  + ++ +YS++I    K  +  +A ++ + ++  G+   L  YN +++  G A
Sbjct: 217 QRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMD--GYA 274

Query: 138 KLFKEARLL-----IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +   EA+ L     ++   + G+ P  V+Y  L+NLY +  K ++AL    EM      L
Sbjct: 275 RCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITL 334

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T ++++D Y QL    +A  +F  M + GI+P  V+YN LL+ + ++     AI L 
Sbjct: 335 NRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLL 394

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+ +     + TY T+I  + K+ +   A   + EM+  G  PNA TY+ I+    + 
Sbjct: 395 GRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQL 454

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPR 368
           G++DRAA +  ++  +GV+ +   Y T++  +  +G +  A    KR+    ++P  I  
Sbjct: 455 GQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISY 514

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + +    +AGR++ A  V  +   AG   +  +F  +++ +++         + +KMR 
Sbjct: 515 ASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQ 574

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            G+ PD H     +N+  K  + + A +   EM+++
Sbjct: 575 EGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQ 610



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 189/407 (46%), Gaps = 13/407 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR---GIAPDRYTYSTLITCFGKE 67
           EE     ++  YN+++    R         +F +++ R   G++P   TY  LI  + K 
Sbjct: 255 EEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKL 314

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G    A+ + ++M+   ++ +   YS L++   +L D++ A S+F  +  +GI PD V Y
Sbjct: 315 GKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTY 374

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N ++  F K++    A  L+  M+ +G  P   +Y T+++ +++      A    +EM  
Sbjct: 375 NILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKL 434

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C  + TT N+++    QL     A  +   M   G+ P+  SY TL++ +      GE
Sbjct: 435 AGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFAS---IGE 491

Query: 248 AIHLFRLMQR-KEIEQN--VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
               F+ ++R  EI Q   +++Y +++K   K+   + A  + +EM   G+  N   ++T
Sbjct: 492 IGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNT 551

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++  W + G +  A  + QK+R  G   D   Y + + A  + G +  A   + E++Q +
Sbjct: 552 LLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQD 611

Query: 365 TIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMI 407
             P     TIL          E+A   + +   AG + D  ++ C++
Sbjct: 612 LQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIV 658



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 153/322 (47%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y++++   ++   +  A  +F++M + GI PD  TY+ L+  F K      AI  L +M+
Sbjct: 339 YSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMK 398

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
               S  +  Y  +I+   K  D   A    S +K +G  P+   YN +++   +     
Sbjct: 399 TRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQID 458

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  +I+EM   GV+P+  SY+TL+  +    +   A      +NE+     + +   ++
Sbjct: 459 RAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLL 518

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               +    ++A  +   M   G+  +   +NTLL  + +     EA  + + M+++   
Sbjct: 519 KACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFT 578

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++ +Y + +    K+ + +KAT  ++EM+ + ++PN  TY+ +I  W      ++A + 
Sbjct: 579 PDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALIC 638

Query: 322 FQKLRSSGVEIDPVLYQTMIVA 343
           + +++++G+  D  LY  ++ +
Sbjct: 639 YDEMKAAGLIPDKPLYYCIVTS 660



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 7/297 (2%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++I  YG+    + A   F  MR  GID SV +YN L+R Y  A+    A+     M+ +
Sbjct: 128 LLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIE 187

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  N  T++ +I  YG S   E A    Q   +     N   YS+II  + KAG ++RA
Sbjct: 188 GIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERA 247

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-------QPNTIPRETA 371
             L   +   G+E    LY  ++  Y R  + A    + H+L+        P  +     
Sbjct: 248 EALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCL 307

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + G++ +A    ++    G   + + +  +++ + +   +AN   VFE M  AG 
Sbjct: 308 INLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGI 367

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            PD     ++L ++ K R+   A  L   M+  GC  + Q +  ++  +    D  M
Sbjct: 368 EPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRM 424



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 139/307 (45%), Gaps = 36/307 (11%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y  L+  YG+      A   F  M+   I+ +V  YN +I+ Y  +   + A + ++EM+
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             GI PNA T+S II+ +G +G ++ A   FQ+  S     +  +Y ++I AY + G + 
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245

Query: 352 HAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
            A+ L+ ++ +                           Q  +A     + ++  +++ ++
Sbjct: 246 RAEALVADMEE---------------------------QGLEA----TLGLYNILMDGYA 274

Query: 412 RNKKYANVIEVFEKMRS---AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
           R    A  + VF K+++    G  P +     ++N Y KL +   A +   EM+ +G   
Sbjct: 275 RCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITL 334

Query: 469 SDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDASRI 527
           +   +  ++  Y    DF    S+FE + S++ I    + ++++   + ++ ++  A ++
Sbjct: 335 NRNTYSMLVDGYVQLGDFANAFSVFEDM-SEAGIEPDWVTYNILLKAFCKSRQMTRAIQL 393

Query: 528 MNRMNKR 534
           + RM  R
Sbjct: 394 LGRMKTR 400


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 244/515 (47%), Gaps = 15/515 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +Y V++R +   +  + A GL   MR  G+  D  TY TLI         D A+  
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M +  +  ++V+YS+L++   K   +     +F  +   GI PD+V Y  +I+   K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K+A  +++ M  +G++P+ V+Y+ L+N   +     EA+ V  +M+E     D+ T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG-----IDPSVVSYNTLLRVYGEAELFGEAIHL 251
            N +I     L    + D   W + +M      + P+VV++N++++   +     +A  +
Sbjct: 293 YNTLIK---GLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M+      N+VTYN +I    +  +  KA  LM EM + G+EP++ TYS +I  + K
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--P-NTIPR 368
             ++DRA  L   +R  G+E +   Y  ++VA    G++  A+ L +E+    P + +  
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAY 469

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I    +AG ++ A  + +   D G   D   +  +I +F+++        V ++M +
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM-LSLYGARKDFN 487
           +G+ PD  +   ++  Y    E     +L  EM  +      ++   +  SL  + +   
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKA 589

Query: 488 MLESL--FERLDSDSNINK-KELHHVVAGIYERAN 519
           +L+SL  F    S  NIN  +EL  V+  +  + N
Sbjct: 590 LLQSLPDFSAEISKGNINSPQELMKVLHNVCPQTN 624



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 208/447 (46%), Gaps = 47/447 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P+V  Y+ +L+   ++ +WE    +F EM ++GI PD   Y+ LI    K G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +  M +  +  ++V Y+ LI    K     +AI +  ++   G+ PD+V YNT+I
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 132 NVFGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                     EA  L+EEM   +  VKP+ V++++++    +  +  +A  V A M E  
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C ++L T N++I    ++   + A  L   M  +G++P   +Y+ L              
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSIL-------------- 403

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
                                IK + K  + ++A +L+  M++RGIEP    Y  ++   
Sbjct: 404 ---------------------IKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNT 365
            + G ++RA  LF ++ ++   +D V Y TMI    + G +  AK LL     E   P+ 
Sbjct: 443 CEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I + A++G +E A  V +Q   +G + D++VF  +I+ +S   +   V+E+  +
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561

Query: 426 MRSAGYFPDSHII-----ALVLNSYGK 447
           M +     DS II     +LV ++ GK
Sbjct: 562 MITKNIALDSKIISTLSTSLVASNEGK 588



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 230/501 (45%), Gaps = 52/501 (10%)

Query: 53  DRYTYSTLITCFGKEGMFDSAISWLQQME---QDRVSGDLVLYSNLIE--LARKLSDYSK 107
           D  +Y+T++T   + G  D A + L+ M          + V Y+ L+    A +L+D  +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD--Q 133

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ +   ++S+G+  D+V Y T+I     A    +A  L+ EM E G++P+ V YS+LL 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            Y ++ ++ +   VF EM+E     D+     +ID   ++  AK A  +   M + G++P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+YN L+    +     EAI + + M  K +  +VVTYNT+IK     LE ++A  L+
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 288 QEMQNRG---IEPNAITYSTII----------------AIWGKAG--------------- 313
           +EM  RG   ++PN +T++++I                A+  + G               
Sbjct: 314 EEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 314 ----KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
               K+ +A  L  ++ S G+E D   Y  +I  + ++  V  A+ LL  +R    +P  
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 +  +   G +E A  +F +  D     D+  +  MI    +        E+ + 
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +   G  PD+   ++V+N + K  + E A+ +  +M   G +    V   ++  Y  + +
Sbjct: 492 IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGE 551

Query: 486 FN-MLESLFERLDSDSNINKK 505
            N +LE + E +  +  ++ K
Sbjct: 552 INKVLELIREMITKNIALDSK 572



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 3/177 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE     ++  YN+++  +LR  +   A  L DEM   G+ PD +TYS LI  F K    
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNT 129
           D A   L  M    +  +L  Y  L+    +     +A ++F+ + ++   P D+VAY+T
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN--FPLDVVAYST 471

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           MI+   KA   K A+ L++ + ++G+ PD V+YS ++N++ ++     A  V  +M 
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 17/284 (5%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ---NRGIEPNAIT 301
            GEA  L   +      ++ V+YNT++    +   H++A  L++ M    +    PNA++
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ ++         D+A  L + +RS+GV  D V Y T+I        V  A  L+ E+ 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   + +    ++GR E+   VF +  + G   D+ ++  +I+   +  K  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               V + M   G  P+     +++N   K    + A  +  +M E+G V  D V +  L
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG-VAPDVVTYNTL 296

Query: 478 SLYGARKDFNMLES--LFERLDSDSNINKKEL---HHVVAGIYE 516
            + G      M E+  L E +    NI K  +   + V+ G+ +
Sbjct: 297 -IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 194/373 (52%), Gaps = 4/373 (1%)

Query: 7   DWINEEARYS----PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +N+ ++Y     P V  Y++++  + +  + + A  LF+EM+ +G+ PD  +YSTLI 
Sbjct: 221 EMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIH 280

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            F   G +D +     +M    V  D+V +S LI+   K    ++A  +   +   GIVP
Sbjct: 281 GFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP 340

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           +L+ YN++I+ F        AR L   M  +G++PD +SY+TL+N Y +  K  EA++++
Sbjct: 341 NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLY 400

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM +V    ++TT   ++    Q     DA +LF  M+  G+  +   Y   L    + 
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +   EA+ LF  ++    + N+  Y+ +I    K+ + E A  L +++   G++P+ +TY
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY 520

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + +I  + K G++D A +LF+K+  +G   D + Y T++  +     +    +LLH++ Q
Sbjct: 521 NIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQ 580

Query: 363 PNTIPRETAITIL 375
            +  P   + TI+
Sbjct: 581 KDVSPNAASCTIV 593



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 248/530 (46%), Gaps = 49/530 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + ++N +L  + +   +     L++EMR  G++PD +T S L  C             
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCL------------ 136

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                 +RVS                    +A++  + +   G +P++V Y T+I     
Sbjct: 137 ---CNVNRVS--------------------EALAAMAGILRRGYIPNVVTYTTLIKGLCM 173

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NE-----VNC 190
                EA  L   M++ G  P+ V+Y TL+    +      AL +  EM N+     VNC
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC 233

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T +I+ID   ++    +A  LF  M+  G+ P V+SY+TL+  +  A  + ++ H
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M  + ++ ++VT++ +I    K  +  +A  L++ M  RGI PN ITY+++I  + 
Sbjct: 294 LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G L+ A  LF  + S G+E D + Y T+I  Y +   V  A  L +E+ Q    PN  
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T +  L + G++ +A  +F      G   +  ++G  ++   +N      +E+F ++
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL 473

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK-- 484
           +S  +  +    + +++   K  + ETA +L+ ++ +EG +  D V + ++ ++G  K  
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG-LQPDVVTYNIM-IHGFCKVG 531

Query: 485 DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
             +    LFE+++ +        ++ +   +   N+L +  +++++M ++
Sbjct: 532 QVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 212/453 (46%), Gaps = 10/453 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+V  Y  +++ +    +   A  LF  M++ G  P+  TY TLI    + G  + A+
Sbjct: 157 YIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIAL 216

Query: 75  SWLQQMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
              ++M  D           ++ YS +I+   K+    +A  +F  +K+ G++PD+++Y+
Sbjct: 217 KLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYS 276

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+I+ F  A  + +++ L +EM +QGV+PD V++S L++   +  K  EA  +   M + 
Sbjct: 277 TLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               +L T N +ID +  +     A  LF SM   G++P  +SY TL+  Y +     EA
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           ++L+  M +     NV TY T++K   +  +   A  L   M+  G+  N+  Y   +  
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDG 456

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             K   L  A  LF +L+S   +++   Y  +I    + G +  A  L  +L     QP+
Sbjct: 457 LCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     I    + G+++ A  +F +  + G   DI  +  ++  F    K   VI++  
Sbjct: 517 VVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH 576

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           KM      P++    +V++   K  +++   DL
Sbjct: 577 KMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 12/437 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP +F  +++   +    +   A      + +RG  P+  TY+TLI     E     
Sbjct: 120 AGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISE 179

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG------IVPDLVA 126
           A     +M++   + + V Y  LI+   +  + + A+ +   + +          P ++ 
Sbjct: 180 ATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+   K     EA+ L EEM+ QG+ PD +SYSTL++ +    K+ ++  +F EM 
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +     D+ T +++ID   +     +A +L   M + GI P++++YN+L+  +       
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A  LF  M  K +E + ++Y T+I  Y K+ + ++A NL  EM   G  PN  TY T++
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
               + GK+  A  LF  +++ GV  +  +Y   +    +   +  A  L +EL+    +
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK 479

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N       I  L +AG++E A  +F +    G   D+  +  MI  F +  +  N   +
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539

Query: 423 FEKMRSAGYFPDSHIIA 439
           FEKM   G  PD  IIA
Sbjct: 540 FEKMEENGCTPD--IIA 554



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 2/310 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  ++V++  + +  +   A  L + M QRGI P+  TY++LI  F   G  +SA   
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVFG 135
              M    +  D + Y+ LI    K     +A+++++ +   G  P++  Y T++  +F 
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  +A+ L   M+  GV  ++  Y   L+   +N    EA+ +F E+   N  L++ 
Sbjct: 425 KGKV-GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE 483

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             + +ID   +    + A  LF  + + G+ P VV+YN ++  + +      A  LF  M
Sbjct: 484 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 543

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +      +++ YNT++  + +  + E+   L+ +M  + + PNA + + ++ +  K  K 
Sbjct: 544 EENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 603

Query: 316 DRAAMLFQKL 325
            +   L  K 
Sbjct: 604 KKFVDLLPKF 613



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 174/392 (44%), Gaps = 25/392 (6%)

Query: 160 VSYSTLLNLYVENHKF-----VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +S+   L+L++ N K      ++A   F  M   +    +++ N ++    +++      
Sbjct: 52  ISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLF 111

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L+  MR  G+ P + + + L           EA+     + R+    NVVTY T+IK  
Sbjct: 112 SLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIK-- 169

Query: 275 GKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS---- 328
           G  +EH   +AT L   MQ  G  PNA+TY T+I    + G ++ A  L +++ +     
Sbjct: 170 GLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQY 229

Query: 329 GVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
           GV   P  + Y  +I    +VG    AK L  E++     P+ I   T I     AG+ +
Sbjct: 230 GVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD 289

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           ++  +F +  D G   D+  F  +I+   +  K     ++ E M   G  P+      ++
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL---FERLDSD 499
           + +  + +  +A +L+  M  +G +  D++ +  L + G  K + + E++    E L   
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKG-LEPDEISYTTL-INGYCKTWKVKEAMNLYNEMLQVG 407

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            + N      ++ G++++  ++ DA ++   M
Sbjct: 408 KSPNVTTYGTLLKGLFQKG-KVGDAKKLFGVM 438


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 190/375 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P   AYN +L+  ++    + A  +  EM + G +PD +TYS LI  +   G +
Sbjct: 318 KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRW 377

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +SA   L++ME   V  +  ++S ++   R    + K+  +   +++SG+ PD   YN M
Sbjct: 378 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 437

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ FGK      A    + MR +GV+PD V+++TL++ + ++    +A  +F  M E  C
Sbjct: 438 IDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGC 497

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
               TT NIMI+ +G+ +  +D   L   M+  G+  +VV+Y TL+ +YG++  F +AI 
Sbjct: 498 SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIE 557

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
              +M+   ++ +   YN +I  Y +    E+A N  + M+  G++P+ +  +++I  +G
Sbjct: 558 CLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           +  +   A  + Q ++ + ++ D V Y T++ A  RV        +  E+      P   
Sbjct: 618 EDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 677

Query: 371 AITILARAGRIEEAT 385
           A  +L  A R  E T
Sbjct: 678 ARAMLRSALRYMERT 692



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 192/397 (48%), Gaps = 4/397 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G++P   T   +IT  G  G  + A +  +++++  +      Y+ L++   K      A
Sbjct: 286 GLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDA 345

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            SI S ++ SG  PD   Y+ +I+ +  A  ++ AR++++EM   GV+P++  +S +L  
Sbjct: 346 ESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILAS 405

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +  K+ ++  V  EM       D    N+MID +G+ +    A   F  MR  G+ P 
Sbjct: 406 YRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 465

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V++NTL+  + ++    +A  LF  MQ         TYN MI  +G+    E    L+ 
Sbjct: 466 AVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 525

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           +MQ++G+  N +TY+T++ I+G++G+   A    + ++S G++    +Y  +I AY + G
Sbjct: 526 KMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRG 585

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           L   A      +R    +P+ +   + I       R  EA  V +   +     D+  + 
Sbjct: 586 LSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYT 645

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +++   R +K+  V  V+E+M  +G  PD    A++
Sbjct: 646 TLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 682



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 209/460 (45%), Gaps = 14/460 (3%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R + +   YN ++    R    E A  L   MR+ G   D   YS +I    +    DS 
Sbjct: 179 RQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDS- 237

Query: 74  ISWLQ----QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            S LQ    ++E D++  D  L +++I    K  D ++A+S  + ++ +G+ P       
Sbjct: 238 -SMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVA 296

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I   G A   +EA  + EE++E G+ P T +Y+ LL  YV+     +A S+ +EM    
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 356

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D  T +++ID Y      + A  +   M   G+ P+   ++ +L  Y +   + ++ 
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 416

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKS--LEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            + R M+   +  +   YN MI  +GK   L+H  AT     M+  G++P+A+T++T+I 
Sbjct: 417 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT--FDRMRMEGVQPDAVTWNTLID 474

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
              K+G  ++A  LF+ ++ SG       Y  MI ++         K LL +++      
Sbjct: 475 CHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 534

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +   T + I  ++GR ++A          G     +++  +I  +++       I  F
Sbjct: 535 NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAF 594

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MR+ G  P   ++  ++N++G+ R    A  +   M+E
Sbjct: 595 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/435 (21%), Positives = 191/435 (43%), Gaps = 14/435 (3%)

Query: 63  CFGKEGMFDSAISWLQQMEQ--------DRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           CF  E ++   I  L + E+         R +   + Y+ LI    +  D  KA+++ SR
Sbjct: 150 CFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSR 209

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVEN 172
           ++  G   D V Y+ +I    +      + L  +  E+    ++ D    + ++  + ++
Sbjct: 210 MRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKS 269

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
                A+S  A +          T   +I   G     ++A+ +F  +++ G+ P   +Y
Sbjct: 270 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY 329

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N LL+ Y +     +A  +   M+R     +  TY+ +I  Y  +   E A  +++EM+ 
Sbjct: 330 NALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEA 389

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
            G+ PN+  +S I+A +   GK  ++  + +++R+SGV  D   Y  MI  + +   + H
Sbjct: 390 SGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 449

Query: 353 A----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A     R+  E  QP+ +   T I    ++G   +A  +F    ++G     + +  MI 
Sbjct: 450 ALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMIN 509

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F   +++ +V  +  KM+S G   +      +++ YG+   F+ A +    M+  G   
Sbjct: 510 SFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKP 569

Query: 469 SDQVHFQMLSLYGAR 483
           S  ++  +++ Y  R
Sbjct: 570 SSTMYNALINAYAQR 584



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/409 (19%), Positives = 173/409 (42%), Gaps = 33/409 (8%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL--SVF 182
           + YN +I    +    ++A  L+  MR  G   D V+YS ++      +K   ++   ++
Sbjct: 185 LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 244

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           AE+      LD    N +I  + +      A      ++  G+ P   +   ++   G A
Sbjct: 245 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 304

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  +F  ++   +      YN ++K Y K+   + A +++ EM+  G  P+  TY
Sbjct: 305 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S +I  +  AG+ + A ++ +++ +SGV  +  ++  ++ +Y   G    + ++L E+R 
Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR- 423

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
                                         ++G   D   +  MI+ F +     + +  
Sbjct: 424 ------------------------------NSGVSPDRHFYNVMIDTFGKCNCLDHALAT 453

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++MR  G  PD+     +++ + K      A++L+  MQE GC      +  M++ +G 
Sbjct: 454 FDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGE 513

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++ +  +++L  ++ S   +     +  +  IY ++ R  DA   +  M
Sbjct: 514 QERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVM 562



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 140/306 (45%), Gaps = 11/306 (3%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L QR+ +    +TYN +I    ++ + EKA NLM  M+
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQRQTL--TPLTYNALIGACARNDDLEKALNLMSRMR 211

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G   + + YS II    +  K D + +  ++ ++ S  +E+D  L   +IV + + G 
Sbjct: 212 RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 271

Query: 350 VAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           V  A   L  ++     P T      IT L  AGR EEA  +F +  + G +     +  
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 331

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++ + +     +   +  +M  +G+ PD H  +L++++Y     +E+A  +  EM+  G
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              +  V  ++L+ Y  R  +     +   + +      +  ++V+   + + N L+ A 
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451

Query: 526 RIMNRM 531
              +RM
Sbjct: 452 ATFDRM 457


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 249/543 (45%), Gaps = 25/543 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R SP+V+ YN+++R      + +   G F EM + G  P+  TY+TLI  + K G  D 
Sbjct: 208 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 267

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L+ M    +  +L+ Y+ +I    +     +A  I   +   G  PD V YNT++N
Sbjct: 268 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            + K   F +A ++  EM   GV P  V+Y+ L+N   +      A+  F +M       
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +ID + +  +  +A R+   M + G  PSVV+YN  +  +   E   EA+ + 
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  K +  +VV+Y+T+I  + +  E ++A  + QEM  +G+ P+A+TYS++I    + 
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPR 368
            +L  A  L Q++   G+  D   Y T+I AY   G +  A  L    +H+   P+ +  
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567

Query: 369 ETAITILARAGRIEEAT-WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI------- 420
              I  L +  R  EA   +F+  ++     D++ +  +IE  S N ++ +V+       
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVT-YDTLIENCS-NIEFKSVVALIKGFC 625

Query: 421 ---------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
                     VFE M    + P   +  ++++ + +      A +LY EM   G V    
Sbjct: 626 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 685

Query: 472 VHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
               ++ +L+    +  M E + + L S   +N+ EL  V+  I  +   +     ++  
Sbjct: 686 TVITLIKALFKEGMNEEMSEVIGDTLRS-CRLNEAELAKVLVEINHKEGNMEAVLNVLTD 744

Query: 531 MNK 533
           M K
Sbjct: 745 MAK 747



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 213/458 (46%), Gaps = 33/458 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAK-QWEL-AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           + P V +YN VL  ++R++   +L A  ++ EM +  ++P+ YTY+ LI  F   G    
Sbjct: 173 FMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQK 232

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +    +ME++    ++V Y+ LI+   K+    +A  +   + S G+ P+L++YN +IN
Sbjct: 233 GLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIIN 292

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +    KEA  ++EEM  +G  PD V+Y+TLLN Y +   F +AL + AEM       
Sbjct: 293 GLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSP 352

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            + T   +I+   +      A   F  MR  G+ P+  +Y TL+  +    L  EA  + 
Sbjct: 353 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       +VVTYN  I  +      E+A  ++QEM  +G+ P+ ++YSTII+ + + 
Sbjct: 413 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 472

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G+LDRA  + Q++   GV  D V Y ++I               L E+R           
Sbjct: 473 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQG-------------LCEMR----------- 508

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                  R+ EA  + ++  D G   D   +  +I  +         + + ++M   G+ 
Sbjct: 509 -------RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 561

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
           PD+   ++++N   K      A  L  ++  E  V SD
Sbjct: 562 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 10/433 (2%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVF----GKAKLFKEARLLIEEMREQGVKPDTVSY 162
           +A++  +  KSSG +P +++YN++++      G  KL  E   +  EM    V P+  +Y
Sbjct: 160 QAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE--VYREMIRSRVSPNVYTY 217

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + L+  +    +  + L  F EM    C  ++ T N +ID Y ++    +A  L  SM  
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P+++SYN ++          EA  +   M  K    + VTYNT++  Y K     +
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  +  EM   G+ P+ +TY+ +I    KA  L+RA   F ++R  G+  +   Y T+I 
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            + R GL+  A R+L+E+ +    P+ +     I       R+EEA  V ++  + G   
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +I  F R  +     ++ ++M   G  PD+   + ++    ++R    A DL 
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 517

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
            EM + G    +  +  +++ Y    D N    L + +     +     + V+     + 
Sbjct: 518 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 577

Query: 519 NRLNDASRIMNRM 531
            R  +A R++ ++
Sbjct: 578 ARTREAKRLLFKL 590



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 204/476 (42%), Gaps = 60/476 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +YNV++  + R    + A  + +EM  +G  PD  TY+TL+  + KEG F  A+  
Sbjct: 282 PNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVI 341

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M ++ VS  +V Y+ LI    K  + ++A+  F +++  G+ P+   Y T+I+ F +
Sbjct: 342 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 401

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L  EA  ++ EM E G  P  V+Y+  ++ +    +  EAL V  EM E     D+ +
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + +I  +   G+LD A    +    M + G+ P  V+Y++L++   E     EA  L +
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQ---EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    +  +  TY T+I  Y    +  KA +L  EM ++G  P+A+TYS +I    K  
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578

Query: 314 KLDRAAMLFQKL-----------------RSSGVEIDPVL-------------------- 336
           +   A  L  KL                   S +E   V+                    
Sbjct: 579 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFE 638

Query: 337 -------------YQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAG 379
                        Y  +I  + R G +  A    K ++H    P+T+   T I  L + G
Sbjct: 639 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             EE + V      +  + +  +   ++E+  +      V+ V   M   G  P+S
Sbjct: 699 MNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 15/276 (5%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+ +SPSV  YN  +      ++ E A G+  EM ++G+APD  +YST+I+ F ++G  D
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    Q+M +  VS D V YS+LI+   ++   ++A  +   +   G+ PD   Y T+I
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS-VFAEMNEVNC 190
           N +       +A  L +EM  +G  PD V+YS L+N   +  +  EA   +F  + E + 
Sbjct: 537 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 596

Query: 191 PLDLT------TC-NI-------MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           P D+T       C NI       +I  +    +  +ADR+F SM +    P    YN ++
Sbjct: 597 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 656

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
             +       +A +L++ M       + VT  T+IK
Sbjct: 657 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 692


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 227/488 (46%), Gaps = 39/488 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+F +  +L +++++  +     L  +M   GI  D    S LI CF + G    + S 
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 77  LQ-------------------------QMEQ-----DRVSG-----DLVLYSNLIELARK 101
           L                          Q+ Q     D+V       + V Y  LI    K
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +   S A+ +  R+    + P++V YNT+I+   K KL  EA  L  EM  +G+ PD V+
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+ L++ +    K  +A  +F +M   N   ++ T NI++D + +    K+A  +   M 
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K GI P V +YN+L+  Y   +   +A H+F  + ++ +  N+ +Y+ MI  + K  + +
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A NL +EM    I P+ +TY+++I    K GK+  A  L  ++   GV  D + Y +++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
            A  +   V  A  LL +++    QP+     T +  L + GR+E+A  VF      G +
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D++++  MI+ F  +  +   +++  KM   G  P++    +++ S     E + A+ L
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549

Query: 458 YSEMQEEG 465
             EM   G
Sbjct: 550 LREMITRG 557



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 214/462 (46%), Gaps = 39/462 (8%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           + Q+   P  + +  ++    K   + + +S  +QME + ++ DLV+ S LI    +L  
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 105 YSKAISIFSRLKSSGIVPDL-----------------------------------VAYNT 129
              + S+ +++   G  P++                                   V+Y T
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN   K      A  L+  +  + V+P+ V Y+T+++   +     EA  +++EM    
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T N +I  +  +   KDA  LF  M    I+P+V ++N L+  + +     EA 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++  +M ++ I+ +V TYN+++  Y    E  KA ++   +  RG+ PN  +YS +I  +
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---P-NT 365
            K  K+D A  LF+++  + +  D V Y ++I    ++G +++A +L+ E+     P + 
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   + +  L +  ++++A  +  +  D G   DI  +  +++   +N +  +   VFE 
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +   GY  D +I   ++  +     F+ + DL S+M+E GC+
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 146/282 (51%), Gaps = 4/282 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSA 73
           +P+V+ +N+++    + ++ + A  +   M ++GI PD +TY++L+   C  KE   + A
Sbjct: 279 NPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE--VNKA 336

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                 + Q  V+ ++  YS +I    K+    +A+++F  +  + I+PD+V YN++I+ 
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K      A  L++EM ++GV  D ++Y+++L+   +NH+  +A+++  +M +     D
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   ++D   +    +DA  +F  +   G    V  Y  +++ +    LF E++ L  
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLS 516

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
            M+      N VTY  +I       E++KA  L++EM  RG+
Sbjct: 517 KMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558


>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Glycine max]
          Length = 787

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 263/588 (44%), Gaps = 59/588 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W   + RY  +V  YN++L  + RA++W+L   L+ EM  +G+AP   TY TL
Sbjct: 108 RALQIFEWFKNKGRYDLNVIHYNIMLCTLGRARKWDLVESLWTEMNAKGVAPVNSTYGTL 167

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------ 114
           I  + K G+ + A++WLQ+M+   +  D V    ++ L ++  ++ KA   F R      
Sbjct: 168 IDAYSKGGLKEEALAWLQRMQSQGMEPDEVTMGIVVLLYKRAGEFQKAQEFFRRWMRGAP 227

Query: 115 ---------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
                    +  + +      Y T+I+ +GK   F  A      +  QG   +TV+ +T+
Sbjct: 228 FRLGVDDKVVSHTNVCLSSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTM 287

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           ++LY    +  +A  +F +M E  C  D  T NI+I +  + +  K A + F  M+K  +
Sbjct: 288 IHLYGNCGRLRQACLLFQKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMKKAFL 347

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK--- 282
           +P VVSY TLL  Y   ++  EA  L R M  +++E +  T + + ++Y +S   E+   
Sbjct: 348 EPDVVSYRTLLYAYSTRKMVREAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQSWL 407

Query: 283 -------ATNLMQEMQNRGIEP-----------------------NAITYSTIIAIWGKA 312
                  A N+  +  +  I+                          + ++ +I  +G  
Sbjct: 408 WFRRFHLAGNISSDCYSANIDAYGEWGYTLAAEKVFICCKEKKKLTVLEFNVMIKAYGIG 467

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPR 368
              D+A  LF  ++  GV  D   Y ++I           AK  L ++++     + +P 
Sbjct: 468 KCYDKACQLFDSMKKFGVVADKCSYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPY 527

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I+   + G+ E A  ++++        D+ ++G  I  F+        I    +MR 
Sbjct: 528 CVVISSFTKLGQFEMAEELYKEMLGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMRK 587

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYS--EMQEEG-CVFSDQVHFQMLSLYGARKD 485
           AG   +  I   ++  Y K+   + A + Y   ++ +EG  +FS      M+ LY  R  
Sbjct: 588 AGLPGNPAIYNSLIKLYTKVGYLKEAQETYKLIQLSDEGPSLFSSNC---MIDLYTERLM 644

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               + +FE L  +   N+   + ++  +Y++  RL++A +I  +M +
Sbjct: 645 VEQAKEIFESLMKNEVANEFS-YAMMLCMYKKIGRLDEAIQIATQMRR 691



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 200/488 (40%), Gaps = 71/488 (14%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   Y  ++    +  Q+  A   F  + ++G A +  T +T+I  +G  G    A    
Sbjct: 245 SSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLF 304

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q+M + R   D   Y+ LI L  K +    A   F+R+K + + PD+V+Y T++  +   
Sbjct: 305 QKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMKKAFLEPDVVSYRTLLYAYSTR 364

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF--------------- 182
           K+ +EA  LI EM E+ ++ D  + S L  +YVE+    ++   F               
Sbjct: 365 KMVREAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQSWLWFRRFHLAGNISSDCYS 424

Query: 183 --------------AEMNEVNCP----LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
                         AE   + C     L +   N+MI  YG       A +LF SM+K G
Sbjct: 425 ANIDAYGEWGYTLAAEKVFICCKEKKKLTVLEFNVMIKAYGIGKCYDKACQLFDSMKKFG 484

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +     SY++L+ +   A+    A    + MQ   +  + V Y  +I  + K  + E A 
Sbjct: 485 VVADKCSYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLGQFEMAE 544

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L +EM    ++P+ I Y   I  +  AG +  A     ++R +G+  +P +Y ++I  Y
Sbjct: 545 ELYKEMLGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMRKAGLPGNPAIYNSLIKLY 604

Query: 345 ERVG-----------------------------------LVAHAKRLLHELRQ---PNTI 366
            +VG                                   +V  AK +   L +    N  
Sbjct: 605 TKVGYLKEAQETYKLIQLSDEGPSLFSSNCMIDLYTERLMVEQAKEIFESLMKNEVANEF 664

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                + +  + GR++EA  +  Q    G + DI  +  ++ L+S +++     E F++M
Sbjct: 665 SYAMMLCMYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLYSMDRRLREATETFKEM 724

Query: 427 RSAGYFPD 434
             +G  PD
Sbjct: 725 IKSGVQPD 732



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  +NV+++     K ++ A  LFD M++ G+  D+ +YS+LI           A S+L
Sbjct: 453 TVLEFNVMIKAYGIGKCYDKACQLFDSMKKFGVVADKCSYSSLIHILASADKPHLAKSYL 512

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++  +  D V Y  +I    KL  +  A  ++  +    + PD++ Y   IN F  A
Sbjct: 513 KKMQEAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEMLGYAVQPDVIIYGVFINAFADA 572

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA   + EMR+ G+  +   Y++L+ LY +     EA   +  +   +    L + 
Sbjct: 573 GSVKEAINYVNEMRKAGLPGNPAIYNSLIKLYTKVGYLKEAQETYKLIQLSDEGPSLFSS 632

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M + A  +F S+ K  +  +  SY  +L +Y +     EAI +   M+R
Sbjct: 633 NCMIDLYTERLMVEQAKEIFESLMKNEV-ANEFSYAMMLCMYKKIGRLDEAIQIATQMRR 691

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                ++++YN ++ +Y       +AT   +EM   G++P+  T+  +  I    G
Sbjct: 692 LGFLTDILSYNNVLGLYSMDRRLREATETFKEMIKSGVQPDDFTFRALANILLNCG 747



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 135/284 (47%), Gaps = 1/284 (0%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           ++ +I  +G    +D A      M++  V  D   YS+LI +         A S   +++
Sbjct: 457 FNVMIKAYGIGKCYDKACQLFDSMKKFGVVADKCSYSSLIHILASADKPHLAKSYLKKMQ 516

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            +G+V D V Y  +I+ F K   F+ A  L +EM    V+PD + Y   +N + +     
Sbjct: 517 EAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEMLGYAVQPDVIIYGVFINAFADAGSVK 576

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EA++   EM +   P +    N +I +Y ++   K+A   +  ++     PS+ S N ++
Sbjct: 577 EAINYVNEMRKAGLPGNPAIYNSLIKLYTKVGYLKEAQETYKLIQLSDEGPSLFSSNCMI 636

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
            +Y E  +  +A  +F  + + E+  N  +Y  M+ +Y K    ++A  +  +M+  G  
Sbjct: 637 DLYTERLMVEQAKEIFESLMKNEV-ANEFSYAMMLCMYKKIGRLDEAIQIATQMRRLGFL 695

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            + ++Y+ ++ ++    +L  A   F+++  SGV+ D   ++ +
Sbjct: 696 TDILSYNNVLGLYSMDRRLREATETFKEMIKSGVQPDDFTFRAL 739


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 222/492 (45%), Gaps = 42/492 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI------------------------- 50
           SP+ + Y +++    RA + ELA   F ++ + G+                         
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 51  -----------APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR--VSGDLVLYSNLIE 97
                       PD ++Y+ L+     +G    A   L+ M +     S D+V Y+ +I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K  D +KA  +F  +   GI PDLV Y+++++   KA+   +A   + +M  +GV P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D  +Y+ L+  Y    ++ EA+ VF EM   +   D+   N ++    +    K+A  +F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            +M   G +P V SY  +L  Y       +   LF LM    I  ++ T+N +IK Y   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +KA  +  EM++ G++P+ +TY T+IA   + GK+D A   F ++   GV  D   Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  +   G +  AK L+ E+     + + +   + I  L + GR+ +A  +F    +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D  V+  +++ +    K    + VF+ M SAG  P+      ++N Y K+   + 
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 454 ADDLYSEMQEEG 465
              L+ EM ++G
Sbjct: 590 GLSLFREMLQKG 601



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 246/559 (44%), Gaps = 41/559 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V AYN V+    +      A  LF EM QRGI PD  TYS+++    K    D A +
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA 277

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L+QM    V  D   Y+NLI        + +A+ +F  ++   I+PD+VA NT++    
Sbjct: 278 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M       D+ 
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F  M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR---------------------- 293
             + +  +   Y+ +I+ +       KA  L+ E+ N                       
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 294 -------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                        G+ P+A+ Y+ ++  +   GK+++A  +F  + S+G+E + V Y T+
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  ++G 
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +   +  ++    +N+ +   I +F+++R+     D   +  ++    + R  E A D
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIY 515
           L++ +   G V     +  M++           E +F  + ++    + + L+HVV  + 
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 516 ERANRLNDASRIMNRMNKR 534
           ++ N +  A   ++++++R
Sbjct: 758 KK-NEIVRAGAYLSKIDER 775



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 236/507 (46%), Gaps = 7/507 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P VF+YN++L+++    +   A  L   M + G   +PD   Y+T+I  F KEG  + A 
Sbjct: 182 PDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKAC 241

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M Q  +  DLV YS+++    K     KA +   ++ + G++PD   YN +I  +
Sbjct: 242 DLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGY 301

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +KEA  + +EMR Q + PD V+ +TL+    +  K  EA  VF  M       D+
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 361

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            +  IM++ Y       D   LF  M   GI P + ++N L++ Y    +  +A+ +F  
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 421

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   ++ +VVTY T+I    +  + + A     +M ++G+ P+   Y  +I  +   G 
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L +A  L  ++ ++G+ +D V + ++I    ++G V  A+ +          P      +
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L       G++E+A  VF     AG   ++  +G ++  + +  +    + +F +M   G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P + +  ++++   +      A   + EM E G   +   +  +L      + F+   
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 491 SLFERLDS-DSNINKKELHHVVAGIYE 516
            LF+ L + +  I+   L+ ++AG+++
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQ 688



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 131/292 (44%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +  ++ N+ +  +   A  +FD     G+ PD   Y+ L+  +   G  + A+     M 
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V Y  L+    K+    + +S+F  +   GI P  + YN +I+   +A    
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A++   EM E G+  +  +YS +L    +N  F EA+ +F E+  +N  +D+ T N MI
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 683

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               Q    ++A  LF S+ + G+ P  V+Y+ ++    +  L  EA  +F  MQ    E
Sbjct: 684 AGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCE 743

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    N +++   K  E  +A   + ++  R      +T   ++ ++   G
Sbjct: 744 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 95/188 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   YN+++  +  A +   A   F EM + GIA ++ TYS ++    K   FD AI  
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    V  D++  + +I    +     +A  +F+ +  SG+VP  V Y+ MI    K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +EA  +   M+  G +PD+   + ++   ++ ++ V A +  ++++E N  L+  T
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 197 CNIMIDVY 204
             +++D++
Sbjct: 784 AMLLVDLF 791



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+V  Y  ++    +  + +    LF EM Q+GI P    Y+ +I    + G    
Sbjct: 565 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 624

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A     +M +  ++ +   YS ++    K   + +AI +F  L++  +  D++  NTMI 
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              + +  +EA+ L   +   G+ P  V+YS ++   ++     EA  +F+ M    C  
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP 744

Query: 193 D 193
           D
Sbjct: 745 D 745


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 250/562 (44%), Gaps = 41/562 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP+V AYN V+    +      A  LF EM QRGI PD  TY++++    K    D 
Sbjct: 226 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 285

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM   RV  +   Y+NLI        + +A+ +F  ++   I+PD+V  + ++ 
Sbjct: 286 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 345

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M       
Sbjct: 346 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR------------------- 293
             M  + +  +   YN +I+ +       KA  L+ E+ N                    
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 525

Query: 294 ----------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G+ P+A+ YS ++  +   GK+++A  +F  + S+G+E + V+Y
Sbjct: 526 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 585

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L +AGR   A   F +  +
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   DI  +  ++    +N+ +   I +F+++R+     +   +  +++   + R  E 
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVA 512
           A DL++ +     V +   +  M++           E +F  + ++    N + L+HVV 
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            + ++ N +  A   ++++++R
Sbjct: 766 ELLKK-NEIVRAGAYLSKIDER 786



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 6/423 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYS 106
           G  PD ++YS L+     +G    A   L+ M +     S ++V Y+ +I+   K  D +
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           KA  +F  +   GI PDLV YN++++   KA+   +A   + +M  + V P+  +Y+ L+
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             Y    ++ EA+ VF EM   +   D+ T ++++    +    K+A  +F +M   G +
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P V SYN +L  Y       +   LF LM    I  +  T+N +IK Y      +KA  +
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 429

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             EM++ G++P+ +TY T+IA   + GK+D A   F ++   GV  D   Y  +I  +  
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 489

Query: 347 VGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            G +  AK L+ E+       + +   + I  L + GR+ +A  +F    + G   D  V
Sbjct: 490 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 549

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +++ +    K    + VF+ M SAG  P+  +   ++N Y K+   +    L+ EM 
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609

Query: 463 EEG 465
           + G
Sbjct: 610 QRG 612



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 100/201 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   Y++++  + +A +   A   F EM + GIA D  TY+ ++    K   FD AI  
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 674

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    V  +++  + +I+   +     +A  +F+ +  S +VP++V Y+ MI    K
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +EA  +   M+  G +P++   + ++   ++ ++ V A +  ++++E N  L+  T
Sbjct: 735 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 794

Query: 197 CNIMIDVYGQLDMAKDADRLF 217
             +++D++      ++  R  
Sbjct: 795 AMLLVDLFSSKGTCREQIRFL 815


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/548 (23%), Positives = 252/548 (45%), Gaps = 71/548 (12%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P V+AYN ++     A +++ A+ L +  +++G  P    Y+ ++TC G++G  + A
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 397

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +    +M QD  + +L  Y+ LI++  K  +   A+ +   +K +G+ P+++  N MI+ 
Sbjct: 398 LRIHDEMRQD-AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456

Query: 134 FGKAKLFKEA------------------------------RL-----LIEEMREQGVKPD 158
             KA+   EA                              R+     L E+M +    P+
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN 516

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V Y++L+  + +  +  +   ++ EM    C  DL   N  +D   +    +    LF 
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            ++  G+ P V SY+ L+    +A    E   LF  M+ + +  +V+ YNT+I  + KS 
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + +KA  L++EM+ +G++P  +TY +++    K  +LD A MLF++ +S GV+++ V+Y 
Sbjct: 637 KVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS 696

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           ++I  + +VG +  A  +L EL Q    P                 TW            
Sbjct: 697 SLIDGFGKVGRIDEAYLILEELMQKGLTPNSY--------------TW------------ 730

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
                 C+++   + ++       F+ M++    P++   ++++N    +R+F  A   +
Sbjct: 731 -----NCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYE 516
            EMQ++G   ++  +  M++  G  K  N++E+  LF+R  +   +     ++ +     
Sbjct: 786 QEMQKQGLKPNNITYTTMIA--GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843

Query: 517 RANRLNDA 524
            AN+  DA
Sbjct: 844 SANKAMDA 851



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 221/448 (49%), Gaps = 4/448 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P++   N+++  + +A++ + A  +F  +  +  +PD  T+ +LI   G+ G  
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRV 498

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S  ++M       ++V+Y++LI+   K         I+  +   G  PDL+  N+ 
Sbjct: 499 DDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSY 558

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R L EE++ QG+ PD  SYS L++  V+     E   +F EM E   
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD+   N +ID + +      A +L   M+  G+ P+VV+Y +++    + +   EA  
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   +   ++ NVV Y+++I  +GK    ++A  +++E+  +G+ PN+ T++ ++    
Sbjct: 679 LFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALV 738

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           KA ++D A + FQ +++     + + Y  MI     +     A     E++    +PN I
Sbjct: 739 KAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNI 798

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I  LA+AG + EA  +F +   +G V D + +  MIE  S   K  +   VFE+ 
Sbjct: 799 TYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEET 858

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
           R  G   +S    ++L++  K    E A
Sbjct: 859 RLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 235/493 (47%), Gaps = 9/493 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y  +V  +  ++R   R  + + A  L DEM+      D   Y+  I CFGK G  
Sbjct: 230 QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKV 289

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +M+   +  D V Y+ LI +  K     +A+ +F  L  +  VP + AYNTM
Sbjct: 290 DMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  + +G  P  ++Y+ +L       K  EAL +  EM +   
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA 409

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +LTT NI+ID+  +    + A ++  +M++ G+ P++++ N ++    +A+   EA  
Sbjct: 410 P-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  +  K    +  T+ ++I   G+    + A +L ++M +    PN + Y+++I  + 
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFF 528

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--R 368
           K G+ +    +++++   G   D +L  + +    + G V   + L  E++    +P  R
Sbjct: 529 KCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR 588

Query: 369 ETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I I  L +AG   E   +F +  + G   D+  +  +I+ F ++ K     ++ E+M
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG--ARK 484
           ++ G  P       V++   K+   + A  L+ E +  G   +  ++  ++  +G   R 
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRI 708

Query: 485 D--FNMLESLFER 495
           D  + +LE L ++
Sbjct: 709 DEAYLILEELMQK 721



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 203/442 (45%), Gaps = 40/442 (9%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           +++ + + A G+ + MR+    P    Y+TLI         D  ++   QM++     ++
Sbjct: 179 VKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANV 238

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            L++ L+ +  +      A+S+   +KS+    DLV YN  I+ FGK      A     E
Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHE 298

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M+ QG+ PD V+Y+TL+ +  +  +  EA+ +F E                      LD+
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEE----------------------LDL 336

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +               P V +YNT++  YG A  F EA  L    +RK    +V+ YN 
Sbjct: 337 NRSV-------------PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++   G+  + E+A  +  EM+     PN  TY+ +I +  KAG+L+ A  +   ++ +G
Sbjct: 384 ILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAG 442

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLL----HELRQPNTIPRETAITILARAGRIEEAT 385
           +  + +    MI    +   +  A  +     H++  P++    + I  L R GR+++A 
Sbjct: 443 LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAY 502

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            ++ +  D+ ++ ++ V+  +I+ F +  +  +  +++++M   G  PD  ++   ++  
Sbjct: 503 SLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCV 562

Query: 446 GKLREFETADDLYSEMQEEGCV 467
            K  E E    L+ E++ +G V
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLV 584



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 164/313 (52%), Gaps = 6/313 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y++++  +++A      + LF EM+++G+  D   Y+T+I  F K G  D A   
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M+   +   +V Y ++++   K+    +A  +F   KS G+  ++V Y+++I+ FGK
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA L++EE+ ++G+ P++ +++ LL+  V+  +  EA   F  M  + C  +  T
Sbjct: 705 VGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMT 764

Query: 197 CNIMIDVYGQLDMAKDADR--LFWS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            +IMI+    L M +  ++  +FW  M+K G+ P+ ++Y T++    +A    EA  LF 
Sbjct: 765 YSIMIN---GLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD 821

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +      +   YN MI+    + +   A  + +E + +G   N+ T   ++    KA 
Sbjct: 822 RFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKAD 881

Query: 314 KLDRAAMLFQKLR 326
            L++AA++   LR
Sbjct: 882 CLEQAAIVGAVLR 894



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 100/207 (48%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y+ ++    +  + + A+ + +E+ Q+G+ P+ YT++ L+    K    D A    
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q M+  + S + + YS +I     +  ++KA   +  ++  G+ P+ + Y TMI    KA
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EAR L +  +  G  PD+  Y+ ++      +K ++A  VF E     C ++  TC
Sbjct: 811 GNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTC 870

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMG 224
            +++D   + D  + A  +   +R+M 
Sbjct: 871 VVLLDALHKADCLEQAAIVGAVLREMA 897



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/295 (19%), Positives = 121/295 (41%), Gaps = 40/295 (13%)

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  +  +M++ +       Y T+I     +   +    L  +MQ  G E N   ++T++
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            ++ + G++D A  L  +++S+    D VLY   I  + +VG V  A +  HE++    +
Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305

Query: 367 PRE----TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P +    T I +L +A R++EA                                   +E+
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEA-----------------------------------VEL 330

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           FE++      P  +    ++  YG   +F+ A  L    + +GC+ S   +  +L+  G 
Sbjct: 331 FEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGR 390

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           +        + + +  D+  N    ++++  +  +A  L  A ++ + M +   F
Sbjct: 391 KGKVEEALRIHDEMRQDAAPNLTT-YNILIDMLCKAGELEAALKVQDTMKEAGLF 444



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/243 (16%), Positives = 108/243 (44%), Gaps = 4/243 (1%)

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            Y+  + +  +   LD    + +++  +G  +   +   ++ ++ +   +  A  ++  +
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R+    P      T I  L+ A R +    +F Q  + G   ++ +F  ++ +F+R  + 
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              + + ++M+S  +  D  +  + ++ +GK+ + + A   + EM+ +G V  D  +  +
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           + +    +  +    LFE LD + ++     ++ +   Y  A + ++A  ++ R  ++  
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 537 FNS 539
             S
Sbjct: 375 IPS 377


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 252/525 (48%), Gaps = 13/525 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA-IS 75
           P++  YN+++    R  + +L   +   + + G+ PD ++YS LI  F K+G  D A   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L+ MEQ  +   L+  S + EL  K+ +  KA SI  ++  SGI PDL  Y+ +I+   
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELC-KMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+K   +A  ++E+M E G +P++++Y++L++ Y  +  + E++ VF +M+       + 
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR--VYGEAELFGEAIH-LF 252
            CN  I    +     +A  +F SM   G  P ++SY+T      Y    +     H +F
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIF 411

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+   + 
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR---- 368
           G+LD A   F  +   GV     +Y  +I      G +  AK L+ E+   +  P     
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 369 -ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I  L + GR+ E   +       G+  ++  F  ++E +           + + M 
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 591

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDF 486
           S G  P+ +I   +++ Y K    + A  ++ +M  +G   +  ++  +L  L+ AR+  
Sbjct: 592 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 651

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              +   E ++S + ++      V+ G+  R N  ++A+ ++ ++
Sbjct: 652 AAKKMFHEMIESGTTVSIHTYGVVLGGLC-RNNCTDEANMLLEKL 695



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 220/496 (44%), Gaps = 49/496 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F Y++++  + ++K  + A  + ++M + G  P+  TY++LI  +   GM++ ++ 
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT------ 129
             +QM    V   +   ++ I    K    ++A  IF  +   G  PD+++Y+T      
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVC 396

Query: 130 --------------------------------MINVFGKAKLFKEARLLIEEMREQGVKP 157
                                           +IN + +  +  +A L+ E+M+ +G+ P
Sbjct: 397 YWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 456

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDAD 214
           DTV+++T+++      +  +AL  F  M ++  P        +I     +G+L  AK+  
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE-- 514

Query: 215 RLFWSMRKMGIDPSVVSY-NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            L   M    I P  V Y ++++    +     E   +  +M +     NVVT+N++++ 
Sbjct: 515 -LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 573

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y      E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ +   GV+  
Sbjct: 574 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 633

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAGRIEEATWVFR 389
            VLY  ++    +      AK++ HE+ +  T          +  L R    +EA  +  
Sbjct: 634 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 693

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           + F      DI  F  +I    +  +     E+F+ + + G  P+    ++++ +  K  
Sbjct: 694 KLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEE 753

Query: 450 EFETADDLYSEMQEEG 465
            +E AD+L+  +++ G
Sbjct: 754 SYEEADNLFISVEKSG 769



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 164/370 (44%), Gaps = 5/370 (1%)

Query: 35  WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSN 94
           W + H +F+ M  +GIAP+++ ++ LI  + + GM D A+   + M+   +  D V ++ 
Sbjct: 404 WVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 463

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           +I    ++     A+  F+ +   G+ P    Y  +I          +A+ LI EM  + 
Sbjct: 464 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 523

Query: 155 VKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           + P  V Y S+++N   +  +  E   +   M +     ++ T N +++ Y  +   ++A
Sbjct: 524 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 583

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             L  +M  +GI+P+   Y TL+  Y +     +A+ +FR M  K ++   V Y+ ++  
Sbjct: 584 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 643

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             ++     A  +  EM   G   +  TY  ++    +    D A ML +KL +  V+ D
Sbjct: 644 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 703

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            + +  +I A  +VG    AK L   +      PN       IT L +    EEA  +F 
Sbjct: 704 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 763

Query: 390 QAFDAGEVKD 399
               +G   D
Sbjct: 764 SVEKSGHASD 773



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 27/315 (8%)

Query: 178 ALSVFAEMNEVNCP----LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           A+ +F  M+   CP      + T NI+ID Y ++        +   + K G+ P   SY+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            +     + E+  +A  LF  M  + +   ++  N++IK   K  E +KA +++Q+M + 
Sbjct: 216 LIYGFVKDGEV-DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           GI P+  TYS II    K+  +D+A  + +++  +G   + + Y ++I  Y   G+   +
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 354 KRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
            R+  ++     IP      + I  L + GR  EA  +F      G   DI         
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS------- 387

Query: 410 FSRNKK-----YANVI-----EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +S N       Y  V+      +F  M + G  P+ H+  +++N+Y +    + A  ++ 
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 460 EMQEEGCVFSDQVHF 474
           +MQ +G +  D V F
Sbjct: 448 DMQNKG-MIPDTVTF 461



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 137/298 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  ++ ++ N+ +  +      + D M Q G  P+  T+++L+  +   G  + A + 
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  +  +Y  L++   K      A+++F  +   G+ P  V Y+ +++   +
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 646

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+    A+ +  EM E G      +Y  +L     N+   EA  +  ++  +N   D+ T
Sbjct: 647 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 706

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I    ++   ++A  LF ++   G+ P++ +Y+ ++    + E + EA +LF  ++
Sbjct: 707 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 766

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +     +    N ++++     E  KA+N +  +    +   A T S + +++ + GK
Sbjct: 767 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 824


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 230/476 (48%), Gaps = 18/476 (3%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D I   AR  P+VF YN+++  + +    E A GLF+EM+ RG+ PD  TY+++I  FGK
Sbjct: 120 DMIGAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  D  + + ++M+      D++ Y+ LI    K       +  +  +K +G+ P++V+
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+T+++ F K  + ++A     +MR  G+ P+  +Y++L++   +     +A  +  EM 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +V    ++ T   +ID     +  K+A+ LF  M   G+ P++ SYN L+  + +A+   
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYG-KSLEH-EKATNLMQEMQNRGIEPNAITYST 304
            A+ L   ++ + I+ +++ Y T   I+G  SLE  E A  +M EM+  GI+ N++ Y+T
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTF--IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++  + K+G       L  +++   +E+  V +  +I    +  LV+ A    + +    
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475

Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             Q N       I  L +  ++E AT +F Q    G V D + +     L   N K  NV
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY---TSLMDGNFKQGNV 532

Query: 420 IEVF---EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           +E     +KM   G   D      ++       + + A     EM  EG +  D+V
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG-IHPDEV 587



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 205/428 (47%), Gaps = 9/428 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L    +  + +     F +M   G  P  +TY+ +I C  KEG  ++A
Sbjct: 90  RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 149

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M+   +  D V Y+++I+   K+      +  F  +K     PD++ YN +IN 
Sbjct: 150 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 209

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K            EM+  G+KP+ VSYSTL++ + +     +A+  + +M  V    +
Sbjct: 210 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 269

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   ++    DA RL   M ++G++ +VV+Y  L+    +AE   EA  LF 
Sbjct: 270 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 329

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    +  N+ +YN +I  + K+   ++A  L+ E++ RGI+P+ + Y T   IWG   
Sbjct: 330 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF--IWGLCS 387

Query: 314 --KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----TIP 367
             K++ A ++  +++  G++ + ++Y T++ AY + G       LL E+++ +     + 
Sbjct: 388 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 447

Query: 368 RETAITILARAGRIEEATWVF-RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
               I  L +   + +A   F R + D G   + ++F  MI+   ++ +      +FE+M
Sbjct: 448 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 507

Query: 427 RSAGYFPD 434
              G  PD
Sbjct: 508 VQKGLVPD 515



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 225/481 (46%), Gaps = 7/481 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    ++ +   ++     E A   F +M++  + P   + + L+  F K G  D    +
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M        +  Y+ +I+   K  D   A  +F  +K  G+VPD V YN+MI+ FGK
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +     EEM++   +PD ++Y+ L+N + +  K    L  + EM       ++ +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++D + +  M + A + +  MR++G+ P+  +Y +L+    +     +A  L   M 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +E NVVTY  +I     +   ++A  L  +M   G+ PN  +Y+ +I  + KA  +D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           RA  L  +L+  G++ D +LY T I     +  +  AK +++E+++     N++   T +
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GY 431
               ++G   E   +  +  +      +  F  +I+   +NK  +  ++ F ++ +  G 
Sbjct: 418 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 477

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
             ++ I   +++   K  + E A  L+ +M ++G V  D+  +  L + G  K  N+LE+
Sbjct: 478 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-PDRTAYTSL-MDGNFKQGNVLEA 535

Query: 492 L 492
           L
Sbjct: 536 L 536



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 196/468 (41%), Gaps = 55/468 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT--YSTLITCFGKEGMFDS 72
           +  SV +Y +V   +  A+ +  A+ +  EM       D +   +ST   C    G+FD+
Sbjct: 6   FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDA 65

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                             L+S LI+L        +AI  FS++K   + P   + N +++
Sbjct: 66  ------------------LFSVLIDLGM----LEEAIQCFSKMKRFRVFPKTRSCNGLLH 103

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K     + +   ++M   G +P   +Y+ +++   +      A  +F EM       
Sbjct: 104 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 163

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N MID +G++    D    F  M+ M  +P V++YN L+  + +       +  +
Sbjct: 164 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 223

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M+   ++ NVV+Y+T++  + K    ++A     +M+  G+ PN  TY+++I    K 
Sbjct: 224 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 283

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G L  A  L  ++   GVE + V Y  +I                               
Sbjct: 284 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDG----------------------------- 314

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L  A R++EA  +F +   AG + +++ +  +I  F + K     +E+  +++  G  
Sbjct: 315 --LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 372

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           PD  +    +     L + E A  + +EM+E G   +  ++  ++  Y
Sbjct: 373 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 71/376 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y+ ++    +    + A   + +MR+ G+ P+ YTY++LI    K G    A   
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q  V  ++V Y+ LI+         +A  +F ++ ++G++P+L +YN +I+ F K
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 137 AK-------LFKE----------------------------ARLLIEEMREQGVKPDTVS 161
           AK       L  E                            A++++ EM+E G+K +++ 
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 412

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID-------VYGQLD------ 208
           Y+TL++ Y ++    E L +  EM E++  + + T  ++ID       V   +D      
Sbjct: 413 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 472

Query: 209 ------------------MAKD-----ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                             + KD     A  LF  M + G+ P   +Y +L+    +    
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA+ L   M    ++ +++ Y +++       + +KA + ++EM   GI P+ +   ++
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 592

Query: 306 IAIWGKAGKLDRAAML 321
           +    + G +D A  L
Sbjct: 593 LKKHYELGCIDEAVEL 608


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 213/471 (45%), Gaps = 42/471 (8%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYST 59
           ++VAI   I    +  P+  AYN ++  ++   Q+E  H L++EM   G   PD  TYS 
Sbjct: 173 KAVAIFYQIKVR-KCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSA 231

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI+ F K G  DSAI  L +M+ + +     +Y+ LI L  KL++   A+ +F  ++   
Sbjct: 232 LISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY 291

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD+  Y  +I   GKA  F EA     EMR +G +PDTV  + ++N   +  +  +A+
Sbjct: 292 CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAV 351

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F EM  + C                                    PSVV+YNT+++  
Sbjct: 352 KLFEEMGTLQC-----------------------------------IPSVVTYNTIIKAL 376

Query: 240 GEAE-LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            E++    E    F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P 
Sbjct: 377 FESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPC 436

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
              Y ++I   GKA + D A  LFQ+L+ +       +Y  MI    + G +  A  L  
Sbjct: 437 PAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFD 496

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+ +    PN       ++ LARAG ++EA    R+  + G + DI+ +  ++   ++  
Sbjct: 497 EMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTG 556

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                +E+   M+ +   PD+     VL +      FE A  L  EM   G
Sbjct: 557 GPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 221/500 (44%), Gaps = 19/500 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           ++R    D  TY  LI C      +      +Q+M ++ V   +V    L ++ R L + 
Sbjct: 111 KKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVC--VVTPMELSDIIRMLGNA 168

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
              SKA++IF ++K     P   AYN+MI +      +++   L  EM  +G   PDTV+
Sbjct: 169 KMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVT 228

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM +           ++I ++ +L+    A  LF  MR
Sbjct: 229 YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMR 288

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                P V +Y  L+R  G+A  F EA + F  M+R+    + V  N MI   GK+   +
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLD 348

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            A  L +EM      P+ +TY+TII A++    ++   +  F++++ SG+   P  Y  +
Sbjct: 349 DAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSIL 408

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  + +      A  LL E+ +    P   A    I  L +A R + A  +F++  +   
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCG 468

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+   +  +  + + +F++M   G  P+ +    +++   +    + A  
Sbjct: 469 SSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALT 528

Query: 457 LYSEMQEEGCVFSDQVHFQMLS----LYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
               MQE GC+     +  +L+      G  +   ML ++ +       ++    ++ V 
Sbjct: 529 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVS----YNTVL 584

Query: 513 GIYERANRLNDASRIMNRMN 532
           G    A    +A+++M  MN
Sbjct: 585 GAMSHAGLFEEAAKLMKEMN 604



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 39/340 (11%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R+    P VF Y  ++R + +A +++ A+  F EMR+ G  PD    + +I   GK 
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKA 344

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D A+   ++M   +    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 345 GRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFT 404

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LYVE-- 171
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++             L+ E  
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELK 464

Query: 172 ---------------NH-----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
                           H     +  +A+++F EMN++ C  ++   N ++    +  M  
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLD 524

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A      M++ G  P + SYN +L    +      A+ +   M++  I+ + V+YNT++
Sbjct: 525 EALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVL 584

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                +   E+A  LM+EM   G E + ITYS+I+   GK
Sbjct: 585 GAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/440 (21%), Positives = 198/440 (45%), Gaps = 21/440 (4%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D  KA+ +        +V +++  +  +NV  K + F+ A       +++  + DT +Y 
Sbjct: 72  DAEKALEVLMLKVDHWLVREVMKTDVGVNV--KMQFFRWA------AKKRNYEHDTSTYM 123

Query: 164 TLLNLYVENHKFVEALSVFAEMNE----VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            L+       ++ E   +  EM      V  P++L+    +I + G   M   A  +F+ 
Sbjct: 124 ALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSD---IIRMLGNAKMISKAVAIFYQ 180

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSL 278
           ++     P+  +YN+++ +      + +   L+  M  +     + VTY+ +I  + K  
Sbjct: 181 IKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLG 240

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             + A  L+ EM++ G++P A  Y+ +IA++ K   +  A  LF+++R      D   Y 
Sbjct: 241 RQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYT 300

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            +I    + G    A    HE+R+    P+T+     I  L +AGR+++A  +F +    
Sbjct: 301 ELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTL 360

Query: 395 GEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
             +  +  +  +I+ LF    + + +   FE+M+ +G  P     +++++ + K    E 
Sbjct: 361 QCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEK 420

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  L  EM E+G       +  ++   G  K +++   LF+ L  +   +   ++ V+  
Sbjct: 421 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIK 480

Query: 514 IYERANRLNDASRIMNRMNK 533
              +A RL+DA  + + MNK
Sbjct: 481 HLGKAGRLDDAVNLFDEMNK 500



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 2/266 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           PSV  YN +++ +  +K +       F+ M+  GI+P  +TYS LI  F K    + A+ 
Sbjct: 364 PSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMM 423

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M++         Y +LI+   K   Y  A  +F  LK +        Y  MI   G
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLG 483

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA    +A  L +EM + G  P+  +Y+ L++         EAL+    M E  C  D+ 
Sbjct: 484 KAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDIN 543

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + NI+++   +      A  +  +M++  I P  VSYNT+L     A LF EA  L + M
Sbjct: 544 SYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEM 603

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHE 281
                E +++TY+++++  GK ++HE
Sbjct: 604 NVLGFEYDLITYSSILEAIGK-VDHE 628



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 110/208 (52%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK++++AH LF E+++   +     Y+ +
Sbjct: 420 KAMMLLEEMDEKG-FPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVM 478

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G  D A++   +M +   + ++  Y+ L+    +     +A++   R++  G 
Sbjct: 479 IKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGC 538

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++N   K      A  ++  M++  +KPD VSY+T+L        F EA  
Sbjct: 539 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAK 598

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN +    DL T + +++  G++D
Sbjct: 599 LMKEMNVLGFEYDLITYSSILEAIGKVD 626


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 7/454 (1%)

Query: 19  VFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           V   + +LR +  AK+  E    LF  M + G  PD  +YST++     +G    A+  L
Sbjct: 138 VIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL 197

Query: 78  QQM--EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +    +      ++V+YS ++    K     +A  +F  +   G+ P++V YN++I+   
Sbjct: 198 RMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALC 257

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   +A+ ++ +M   GV+PD V+Y+TL++ Y    ++ +A+ +F EM       +  
Sbjct: 258 KARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTV 317

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TC+  +    +    ++A   F SM   G   +++SY+TLL  Y  A    +  +LF LM
Sbjct: 318 TCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLM 377

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R  I  N   +N ++  Y K     +A  + ++MQ RG+ P+ +TY  +I  + + G +
Sbjct: 378 VRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSM 437

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A   F  +   GVE +  +YQ +I  +   G +  A+ L++E+R     P  +   + 
Sbjct: 438 DDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL 497

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L + GR+ EA  +F      GE  D+++F  +I+ +    K +    V + M S G 
Sbjct: 498 INHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGI 557

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD      ++N   K    +    L+ E+  +G
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 228/499 (45%), Gaps = 39/499 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y+ V+  + +  +   A  LF EM Q+G+ P+  TY+++I    K    D A   L
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +QM  + V  D V Y+ LI     L  + +A+ +F  + S G++P+ V  +T +    K 
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EAR   + M  +G K + +SYSTLL+ Y      V+  ++F  M       +    
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI+++ Y +  M ++A  +F  M+K G++P V++Y  ++  +       +A+  F  M  
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K +E N   Y  +I+ +    +  KA  L+ E++N+G+ P  ++++++I    K G++  
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR---------------------- 355
           A  +F  +  +G + D  ++ ++I  Y  +G ++ A R                      
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVN 569

Query: 356 -----------------LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
                            LLH+  +P T      +  L  AGR   A  +F++  ++G   
Sbjct: 570 GCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAV 629

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            I  +  ++    RN      I VF+K+ +     D  I+ ++++   K R  E A+ L+
Sbjct: 630 TIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLF 689

Query: 459 SEMQEEGCVFSDQVHFQML 477
           + + + G V + Q +  M+
Sbjct: 690 ASIPDYGLVPTVQTYTIMM 708



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/531 (22%), Positives = 225/531 (42%), Gaps = 51/531 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN ++       QW+ A  +F EM  RG+ P+  T ST +    K G  + A  +
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338

Query: 77  LQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              M       +++ YS L+     A  L D S   ++F+ +   GIVP+   +N ++N 
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS---NLFNLMVRDGIVPNQHVFNILVNG 395

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K  + +EA  + E+M+++G+ PD ++Y  +++ +       +A+  F  M +     +
Sbjct: 396 YAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLF 252
                 +I  +        A+ L + +R  G+ P ++S+ +L+  +  E  +F EA  +F
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF-EAQRIF 514

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            ++ R   + +V  + ++I  Y    +  +A  +   M + GIEP+ +TY T++    K 
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN---TIPR- 368
           G++D   +LF++L   GV+     Y  ++      G  A AK +  E+ +     TIP  
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 369 -------------ETAITI----------------------LARAGRIEEATWVFRQAFD 393
                        E AIT+                      + +A R EEA  +F    D
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G V  +  +  M+E   +         VF  M  +G  P SH I +++ +  +  E   
Sbjct: 695 YGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVK 754

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGA----RKDFNMLESLFERLDSDS 500
           A      +  +  +F       +LSL+      R+  N+L + ++     S
Sbjct: 755 AGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLLPAKYQFFGGGS 805


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 220/433 (50%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    +N +++ +    +   A  L D M + G  PD  TY++++    + G    A+
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 203

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++ME+  V  D+  YS +I+   +      AIS+F  +++ GI   +V YN+++   
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA  + +  LL+++M  + + P+ ++++ LL+++V+  K  EA  ++ EM       ++
Sbjct: 264 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 323

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y   +   +A+ +   M +    P +V++ +L++ Y   +   + + +FR 
Sbjct: 324 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 383

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + ++ +  N VTY+ +++ + +S + + A  L QEM + G+ P+ +TY  ++      GK
Sbjct: 384 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A  +F+ L+ S +++  V+Y T+I    + G V  A  L   L     +PN +    
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+ L + G + EA  + R+  + G   +   +  +I    R+       ++ E+M+S G
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563

Query: 431 YFPDSHIIALVLN 443
           +  D+  I +V++
Sbjct: 564 FSADASSIKMVID 576



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 241/523 (46%), Gaps = 10/523 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWEL----AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           S+   NV  R  LR+   ++    A  LF EM +    P    +S   +   +   F+  
Sbjct: 38  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 97

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-N 132
           + + +Q+E + ++ ++   + +I    +      A S+  ++   G  PD   +NT+I  
Sbjct: 98  LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 157

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +F + K+  EA +L++ M E G +PD V+Y++++N    +     AL +  +M E N   
Sbjct: 158 LFLEGKV-SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 216

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +ID   +      A  LF  M   GI  SVV+YN+L+R   +A  + +   L 
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  +EI  NV+T+N ++ ++ K  + ++A  L +EM  RGI PN ITY+T++  +   
Sbjct: 277 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 336

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            +L  A  +   +  +    D V + ++I  Y  V  V    ++   + +   +      
Sbjct: 337 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 396

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           +IL     ++G+I+ A  +F++    G + D+  +G +++    N K    +E+FE ++ 
Sbjct: 397 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +       +   ++    K  + E A +L+  +  +G   +   +  M+S    +   + 
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              L  +++ D N      ++ +   + R   L  +++++  M
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 187/396 (47%), Gaps = 36/396 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V ++D + E     P V  YN ++  + R+    LA  L  +M +R +  D +TYST+I
Sbjct: 167 AVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 225

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS--------------- 106
               ++G  D+AIS  ++ME   +   +V Y++L+    K   ++               
Sbjct: 226 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285

Query: 107 --------------------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
                               +A  ++  + + GI P+++ YNT+++ +       EA  +
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 345

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           ++ M      PD V++++L+  Y    +  + + VF  +++     +  T +I++  + Q
Sbjct: 346 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 405

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               K A+ LF  M   G+ P V++Y  LL    +     +A+ +F  +Q+ +++  +V 
Sbjct: 406 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I+   K  + E A NL   +  +G++PN +TY+ +I+   K G L  A +L +K+ 
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             G   +   Y T+I A+ R G +  + +L+ E++ 
Sbjct: 526 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 91/183 (49%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y+++++   ++ + +LA  LF EM   G+ PD  TY  L+      G  + A+   + +
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++ ++   +V+Y+ +IE   K      A ++F  L   G+ P+++ Y  MI+   K    
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 514

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA +L+ +M E G  P+  +Y+TL+  ++ +     +  +  EM       D ++  ++
Sbjct: 515 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 574

Query: 201 IDV 203
           ID+
Sbjct: 575 IDM 577



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 21/325 (6%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++++    +  Y  ++  + +  + E A  LF  +  +G+ P+  TY+ +I+   K+G  
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 514

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++ME+D  + +   Y+ LI    +  D + +  +   +KS G   D  +   +
Sbjct: 515 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 574

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM---NE 187
           I++     L    RL +     +G K    S   LL L       + +L+ F +M   N 
Sbjct: 575 IDML----LSAMKRLTLRYCLSKGSK----SRQDLLELSGSEKIRLSSLT-FVKMFPCNT 625

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           +   L++ T    I+  G    + + +R    +R+  +     + +  + V  E   +G 
Sbjct: 626 ITTSLNVNT----IEARGM--NSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGL 679

Query: 248 AIHLFRLMQRKEIEQNVVTY---NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
                 LM   E+  + V Y      ++  G+ +    A  L +EM  RGI PN ITYS+
Sbjct: 680 EDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSS 739

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  + K  +LD A  +   + + G
Sbjct: 740 LIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 33/67 (49%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  L  EM QRGIAP+  TYS+LI  F KE   D A   L  M     S    L + L+ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 98  LARKLSD 104
             RK S+
Sbjct: 778 KKRKGSE 784


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 255/549 (46%), Gaps = 16/549 (2%)

Query: 6   LDWIN------EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           LD +N      E+  + P V  + +++  + +A  +  A    D MR +GI P+ +TY+T
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI    +    D A+     ME   V      Y   I+   K  D   A+  F ++K+ G
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I P++VA N  +    KA   +EA+ +   +++ G+ PD+V+Y+ ++  Y +  +  EA+
Sbjct: 466 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 525

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            + +EM E  C  D+   N +I+   + D   +A ++F  M++M + P+VV+YNTLL   
Sbjct: 526 KLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 585

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+     EAI LF  M +K    N +T+NT+     K+ E   A  ++ +M + G  P+ 
Sbjct: 586 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 645

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+TII    K G++  A   F +++   V  D V   T++    + GL+  A +++  
Sbjct: 646 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIAN 704

Query: 360 L-----RQPNTIPRETAI-TILARAGRIEEATWVFRQAFDAGEVKD-ISVFGCMIELFSR 412
                  QP  +  E  + +ILA AG I+ A     +    G  +D  S+   +I    +
Sbjct: 705 FLYSCADQPANLFWEDLMGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSFK 763

Query: 413 NKKYANVIEVFEKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +   +    +FEK  +  G  P      L++    +    E A D++ +++  GC+    
Sbjct: 764 HNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVA 823

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            +  +L  YG     + L  +++ + +         H++V     +A  ++DA  +   +
Sbjct: 824 TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883

Query: 532 NKRRTFNSS 540
              R F+ +
Sbjct: 884 MSDRDFSPT 892



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 193/422 (45%), Gaps = 5/422 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ + + +R + RA +   A+ +   M   G  PD  TY+ LI         D A   
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M+  R   D V Y  L++      D       +S ++  G VPD+V +  +++   K
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F EA   ++ MR+QG+ P+  +Y+TL+   +  H+  +AL +F  M  +       T
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             + ID YG+   +  A   F  M+  GI P++V+ N  L    +A    EA  +F  ++
Sbjct: 438 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 497

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  + VTYN M+K Y K  E ++A  L+ EM     EP+ I  +++I    KA ++D
Sbjct: 498 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVD 557

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +F +++   ++   V Y T++    + G +  A  L   + Q    PNTI   T  
Sbjct: 558 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 617

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +  A  +  +  D G V D+  +  +I    +N +    +  F +M+   Y 
Sbjct: 618 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY- 676

Query: 433 PD 434
           PD
Sbjct: 677 PD 678



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 210/454 (46%), Gaps = 4/454 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + ++YN ++  +L+++    A  ++  M   G  P   TYS+L+   GK    +S +  L
Sbjct: 189 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLL 248

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++ME   +  ++  ++  I +  +    ++A  I  R+   G  PD+V Y  +I+    A
Sbjct: 249 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 308

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +    A+ +  +M+    KPD V+Y TLL+ + +N         ++EM +     D+ T 
Sbjct: 309 RKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTF 368

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I++D   +     +A      MR  GI P++ +YNTL+          +A+ +F  M+ 
Sbjct: 369 TILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMES 428

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++    TY   I  YGKS +   A    ++M+ +GI PN +  +  +    KAG+   
Sbjct: 429 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 488

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
           A  +F  L+  G+  D V Y  M+  Y +VG +  A +LL E+     +P+ I   + I 
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L +A R++EA  +F +  +      +  +  ++    +N K    IE+FE M   G  P
Sbjct: 549 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 608

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           ++     + +   K  E   A  +  +M + GCV
Sbjct: 609 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 642



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 211/448 (47%), Gaps = 17/448 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS+  Y+ ++  + + +  E   GL  EM   G+ P+ YT++  I   G+ G  + A 
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             L++M+ +    D+V Y+ LI+    ARKL D +K   +F+++K+    PD V Y T++
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKL-DCAK--EVFAKMKTGRHKPDRVTYITLL 337

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F   +          EM + G  PD V+++ L++   +   F EA +    M +    
Sbjct: 338 DRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGIL 397

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +L T N +I    ++    DA  +F +M  +G+ P+  +Y   +  YG++     A+  
Sbjct: 398 PNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 457

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+ K I  N+V  N  +    K+    +A  +   +++ G+ P+++TY+ ++  + K
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G++D A  L  ++  +  E D ++  ++I    +   V  A ++   +++    P  + 
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +  L + G+I+EA  +F      G   +   F  + +   +N +    +++  KM 
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637

Query: 428 SAGYFPD-----SHIIALVLNSYGKLRE 450
             G  PD     + I  LV N  G+++E
Sbjct: 638 DMGCVPDVFTYNTIIFGLVKN--GQVKE 663



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 191/418 (45%), Gaps = 39/418 (9%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           IL  +++E    P V  Y V++  +  A++ + A  +F +M+     PDR TY TL+  F
Sbjct: 282 ILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
                 DS   +  +ME+D    D+V ++ L++   K  ++ +A +    ++  GI+P+L
Sbjct: 341 SDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNL 400

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             YNT+I    +     +A  + + M   GVKP   +Y   ++ Y ++   V AL  F +
Sbjct: 401 HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 460

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       ++  CN  +    +    ++A ++F+ ++ +G+ P  V+YN +++ Y +   
Sbjct: 461 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520

Query: 245 FGEAIHL-----------------------------------FRLMQRKEIEQNVVTYNT 269
             EAI L                                   F  M+  +++  VVTYNT
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 580

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++   GK+ + ++A  L + M  +G  PN IT++T+     K  ++  A  +  K+   G
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 640

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEA 384
              D   Y T+I    + G V  A    H++++   P+ +   T +  + +AG IE+A
Sbjct: 641 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDA 698



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 205/464 (44%), Gaps = 47/464 (10%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF------ 70
            P VF YN ++  +++  Q + A   F +M++  + PD  T  TL+    K G+       
Sbjct: 643  PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKI 701

Query: 71   ------------------------------DSAISWLQQMEQDRVS--GDLVLYSNLIEL 98
                                          D+A+S+ +++  + +   GD +L   +I  
Sbjct: 702  IANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRY 760

Query: 99   ARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            + K ++ S A  +F +  K  G+ P L  YN +I    +A + + A+ +  +++  G  P
Sbjct: 761  SFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIP 820

Query: 158  DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
            D  +Y+ LL+ Y ++ K  E   ++ EM+   C  +  T NI+I    +     DA  L+
Sbjct: 821  DVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLY 880

Query: 218  WS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            +  M      P+  +Y  L+    ++    EA  LF  M       N   YN +I  +GK
Sbjct: 881  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            + E + A  L + M   G+ P+  TYS ++      G++D     F++L+ SG+  D V 
Sbjct: 941  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVC 1000

Query: 337  YQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWVFRQA 391
            Y  +I    +   +  A  L +E+++     P+     + I  L  AG +EEA  ++ + 
Sbjct: 1001 YNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1060

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              AG   ++  F  +I  +S + K  +   V++ M + G+ P++
Sbjct: 1061 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 215/507 (42%), Gaps = 46/507 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V   N ++  + +A + + A  +F  M++  + P   TY+TL+   GK G    AI  
Sbjct: 538  PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M Q     + + ++ L +   K  + + A+ +  ++   G VPD+  YNT+I    K
Sbjct: 598  FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNCPLDL 194
                KEA     +M++  V PD V+  TLL   V+     +A  + A    +  + P +L
Sbjct: 658  NGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANL 716

Query: 195  TTCNIMIDVYGQLDM---------------AKDADRLFWSM------------------- 220
               ++M  +  +  +                +D D +   +                   
Sbjct: 717  FWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEK 776

Query: 221  --RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
              + +G+ P + +YN L+    EA++   A  +F  ++      +V TYN ++  YGKS 
Sbjct: 777  FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSG 836

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP--VL 336
            + ++   + +EM     EPN IT++ +I+   KAG +D A  L+  L S   +  P    
Sbjct: 837  KIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSD-RDFSPTACT 895

Query: 337  YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
            Y  +I    + G +  AK+L   +     +PN       I    +AG  + A  +F++  
Sbjct: 896  YGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 955

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
              G   D+  +  +++      +    +  F +++ +G  PD     L++N  GK    E
Sbjct: 956  KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015

Query: 453  TADDLYSEMQEEGCVFSDQVHFQMLSL 479
             A  L++EM++   +  D   +  L L
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLIL 1042



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 202/439 (46%), Gaps = 11/439 (2%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
            K  E+A+ +FD M++R I  D  TY T+  C   +G    A   L++M +     +   
Sbjct: 134 GKIEEMAY-VFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYS 192

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ LI L  K    ++A+ ++ R+   G  P L  Y++++   GK +  +    L++EM 
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG---QLD 208
             G+KP+  +++  + +     K  EA  +   M++  C  D+ T  ++ID      +LD
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
            AK+   +F  M+     P  V+Y TLL  + +          +  M++     +VVT+ 
Sbjct: 313 CAKE---VFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFT 369

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            ++    K+    +A   +  M+++GI PN  TY+T+I    +  +LD A  +F  + S 
Sbjct: 370 ILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL 429

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
           GV+     Y   I  Y + G    A     +++     PN +    ++  LA+AGR  EA
Sbjct: 430 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 489

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +F    D G V D   +  M++ +S+  +    I++  +M      PD  ++  ++N+
Sbjct: 490 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINT 549

Query: 445 YGKLREFETADDLYSEMQE 463
             K    + A  ++  M+E
Sbjct: 550 LYKADRVDEAWKMFMRMKE 568



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 207/499 (41%), Gaps = 45/499 (9%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E +  P+V  YN +L  + +  + + A  LF+ M Q+G  P+  T++TL  C  K    
Sbjct: 567  KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 626

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A+  L +M       D+  Y+ +I    K     +A+  F ++K   + PD V   T+
Sbjct: 627  TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 685

Query: 131  INVFGKAKLFKEARLLI------------------------------------EEMREQG 154
            +    KA L ++A  +I                                    E +   G
Sbjct: 686  LPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANG 745

Query: 155  VKPDTVSYSTLLNLYVENHKFVEALSVFAE--MNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            +  D  S    +  Y   H       +  E    ++     L T N++I    + DM + 
Sbjct: 746  ICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 805

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A  +F  ++  G  P V +YN LL  YG++    E   +++ M   E E N +T+N +I 
Sbjct: 806  AQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVIS 865

Query: 273  IYGKSLEHEKATNLMQE-MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               K+   + A +L  + M +R   P A TY  +I    K+G+L  A  LF+ +   G  
Sbjct: 866  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR 925

Query: 332  IDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWV 387
             +  +Y  +I  + + G      A  KR++ E  +P+       +  L   GR++E    
Sbjct: 926  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR-SAGYFPDSHIIALVLNSYG 446
            FR+  ++G   D+  +  +I    +  +    + +F +M+ S G  PD +    ++ + G
Sbjct: 986  FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045

Query: 447  KLREFETADDLYSEMQEEG 465
                 E A  +Y+E+Q  G
Sbjct: 1046 IAGMVEEAGKIYNEIQRAG 1064



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P +  YN+++  +L A   E+A  +F +++  G  PD  TY+ L+  +GK G  D     
Sbjct: 785  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
             ++M       + + ++ +I    K  +   A+ ++  L S     P    Y  +I+   
Sbjct: 845  YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K+    EA+ L E M + G +P+   Y+ L+N + +  +   A ++F  M +     DL 
Sbjct: 905  KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 964

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T ++++D    +    +    F  +++ G++P VV YN ++   G+     EA+ LF  M
Sbjct: 965  TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024

Query: 256  QR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            ++ + I  ++ TYN++I   G +   E+A  +  E+Q  G+EPN  T++ +I  +  +GK
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTM 340
             + A  ++Q + + G   +   Y+ +
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 232/523 (44%), Gaps = 77/523 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++ A N  L ++ +A +   A  +F  ++  G+ PD  TY+ ++ C+ K G  D AI 
Sbjct: 467 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 526

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M ++    D+++ ++LI    K     +A  +F R+K   + P +V YNT++   G
Sbjct: 527 LLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 586

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA  L E M ++G  P+T++++TL +   +N +   AL +  +M ++ C  D+ 
Sbjct: 587 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 646

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I    +    K+A   F  M+K+ + P  V+  TLL    +A L  +A  +    
Sbjct: 647 TYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANF 705

Query: 256 QRKEIEQ--------------------NVVTYN--------------TMIKIYGKSLEHE 281
                +Q                    N V+++               ++ I   S +H 
Sbjct: 706 LYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHN 765

Query: 282 KATN---LMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            A+    L ++  ++ G++P   TY+ +I    +A  ++ A  +F +++++G   D   Y
Sbjct: 766 NASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATY 825

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             ++ AY + G +     +  E+     +PNTI     I+ L +AG +++A  ++   +D
Sbjct: 826 NFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLY---YD 882

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
               +D S   C          Y  +I+   K                    G+L E   
Sbjct: 883 LMSDRDFSPTAC---------TYGPLIDGLSKS-------------------GRLYE--- 911

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           A  L+  M + GC  +  ++  +++ +G   + +   +LF+R+
Sbjct: 912 AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 38/258 (14%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            +SP+   Y  ++  + ++ +   A  LF+ M   G  P+   Y+ LI  FGK G  D+A 
Sbjct: 889  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC 948

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  ++M ++ V  DL  YS L++    +    + +  F  LK SG+ PD+V YN +IN  
Sbjct: 949  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008

Query: 135  GKAKLFKEARLLIEEMRE-QGVKPDTVSYSTL-LNLYVENHKFVEALSVFAEMNEVNCPL 192
            GK    +EA +L  EM++ +G+ PD  +Y++L LNL                        
Sbjct: 1009 GKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNL------------------------ 1044

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
                        G   M ++A +++  +++ G++P+V ++N L+R Y  +     A  ++
Sbjct: 1045 ------------GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1092

Query: 253  RLMQRKEIEQNVVTYNTM 270
            + M       N  TY  +
Sbjct: 1093 QTMVTGGFSPNTGTYEQL 1110



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 169/377 (44%), Gaps = 8/377 (2%)

Query: 97  ELARKLSDYSKAISIFSRLKS----SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           E+AR L  +    S FS  KS    S +V      N M+         +E   + + M++
Sbjct: 89  EVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQK 148

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           + +K DT +Y T+           +A     +M E    L+  + N +I +  +     +
Sbjct: 149 RIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE 208

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A  ++  M   G  PS+ +Y++L+   G+       + L + M+   ++ NV T+   I+
Sbjct: 209 AMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIR 268

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           + G++ +  +A  +++ M + G  P+ +TY+ +I     A KLD A  +F K+++   + 
Sbjct: 269 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKP 328

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVF 388
           D V Y T++  +     +    +   E+ +   +P     TI    L +AG   EA    
Sbjct: 329 DRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKL 388

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
               D G + ++  +  +I    R  +  + +E+F+ M S G  P ++   + ++ YGK 
Sbjct: 389 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKS 448

Query: 449 REFETADDLYSEMQEEG 465
            +  +A + + +M+ +G
Sbjct: 449 GDSVSALETFEKMKTKG 465


>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 842

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 261/586 (44%), Gaps = 56/586 (9%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
            +W   +  Y  +V  YN++LR + +A +W     L+DEM ++GI P   TY TLI  + 
Sbjct: 174 FEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYS 233

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS------SG 119
           K G+   A+ WL +M +  +  D V    ++++ +K  ++ KA   F +         S 
Sbjct: 234 KGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSH 293

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           +      YNTMI+ +GK+   KEA    + M E+G+ P TV+++T++++Y  N +F E  
Sbjct: 294 VCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVT 353

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           S+   M + +C  D  T NI+I ++ + +  + A   F  M+  G+ P  VSY TLL  +
Sbjct: 354 SLMKTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAF 412

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA------TNLMQEMQNR 293
               +  EA  L   M   ++E +  T + + ++Y ++   EK+       ++   M + 
Sbjct: 413 SIRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFRRVHVAGNMSSE 472

Query: 294 GIEPN---------------------------AITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           G   N                            + Y+ +I  +G +   ++A  LF+ + 
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMM 532

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
           S GV  D   Y T++       +   AK  L ++R+     + IP    I+   + G++ 
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  V+++  +     D+ V+G +I  F+        +   E M+ AG   +S I   ++
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652

Query: 443 NSYGKLREFETADDLYSEMQEEGC-------VFSDQVHFQMLSLYGARKDFNMLESLFER 495
             Y K+   + A+ +Y ++    C       V++      M +L   R      E++FE 
Sbjct: 653 KLYTKVGYLDEAEAIYRKLL-RSCNETQYPDVYTSHC---MNNLCSERSMVRKAEAIFES 708

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
           +      N+     ++  +Y++  R  +A++I  +M + R     L
Sbjct: 709 MKQRREANEFTFAMMLC-MYKKNGRFEEATQIAKQMREMRILTDPL 753



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 235/492 (47%), Gaps = 19/492 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + YN ++    ++ Q + A   F  M + GI P   T++T+I  +G  G F    S +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 356

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M +   + D   Y+ LI L  K +D  +A + F  +K +G+ PD V+Y T++  F   
Sbjct: 357 KTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIR 415

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           ++ KEA  LI EM +  V+ D  + S L  +Y+E     ++ S F  ++ V   +     
Sbjct: 416 RMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFRRVH-VAGNMSSEGY 474

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +  ID YG+     +A+R+F   +++    +V+ YN +++ YG ++   +A  LF  M  
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVN-KRTVLEYNVMIKAYGISKSCEKACELFESMMS 533

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             +  +  TYNT+++I   +   +KA   +++M+  G   + I Y  +I+ + K G+L+ 
Sbjct: 534 YGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNM 593

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAIT 373
           A  +++++    +E D V+Y  +I A+   G V  A   +  +++     N++   + I 
Sbjct: 594 AEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIK 653

Query: 374 ILARAGRIEEATWVFRQ---AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM---R 427
           +  + G ++EA  ++R+   + +  +  D+    CM  L S          +FE M   R
Sbjct: 654 LYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSHCMNNLCSERSMVRKAEAIFESMKQRR 713

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDF 486
            A  F      A++L  Y K   FE A  +  +M+E   + +D + +  +L LY     F
Sbjct: 714 EANEF----TFAMMLCMYKKNGRFEEATQIAKQMREMR-ILTDPLSYNSVLGLYALDGRF 768

Query: 487 NMLESLFERLDS 498
                 F+ + S
Sbjct: 769 KEAVETFKEMVS 780



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 167/349 (47%), Gaps = 41/349 (11%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YNV+++    +K  E A  LF+ M   G+ PD+ TY+TL+       M D A  +L
Sbjct: 504 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 563

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M +     D + Y  +I    KL   + A  ++  +    I PD+V Y  +IN F   
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----NEVNCPLD 193
              ++A   +E M+E G+  ++V Y++L+ LY +     EA +++ ++    NE   P D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYP-D 682

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + M ++  +  M + A+ +F SM+                                
Sbjct: 683 VYTSHCMNNLCSERSMVRKAEAIFESMK-------------------------------- 710

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             QR+  E N  T+  M+ +Y K+   E+AT + ++M+   I  + ++Y++++ ++   G
Sbjct: 711 --QRR--EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDG 766

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +   A   F+++ SSG++ D   ++++     ++G+   A R + E+R+
Sbjct: 767 RFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEIRK 815



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 126/256 (49%), Gaps = 4/256 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y      Y  V+ + ++  Q  +A  ++ EM +  I PD   Y  LI  F   G   
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG---IVPDLVAYN 128
            A+S+++ M++  + G+ V+Y++LI+L  K+    +A +I+ +L  S      PD+   +
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSH 687

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            M N+  +  + ++A  + E M+ Q  + +  +++ +L +Y +N +F EA  +  +M E+
Sbjct: 688 CMNNLCSERSMVRKAEAIFESMK-QRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D  + N ++ +Y      K+A   F  M   GI P   ++ +L  +  +  +  +A
Sbjct: 747 RILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKA 806

Query: 249 IHLFRLMQRKEIEQNV 264
           +     +++KEI++ +
Sbjct: 807 VRKIEEIRKKEIKRGL 822


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 230/476 (48%), Gaps = 18/476 (3%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D I   AR  P+VF YN+++  + +    E A GLF+EM+ RG+ PD  TY+++I  FGK
Sbjct: 252 DMIGAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  D  + + ++M+      D++ Y+ LI    K       +  +  +K +G+ P++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+T+++ F K  + ++A     +MR  G+ P+  +Y++L++   +     +A  +  EM 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +V    ++ T   +ID     +  K+A+ LF  M   G+ P++ SYN L+  + +A+   
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYG-KSLEH-EKATNLMQEMQNRGIEPNAITYST 304
            A+ L   ++ + I+ +++ Y T   I+G  SLE  E A  +M EM+  GI+ N++ Y+T
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTF--IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           ++  + K+G       L  +++   +E+  V +  +I    +  LV+ A    + +    
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607

Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             Q N       I  L +  ++E AT +F Q    G V D + +     L   N K  NV
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY---TSLMDGNFKQGNV 664

Query: 420 IEVF---EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           +E     +KM   G   D      ++       + + A     EM  EG +  D+V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG-IHPDEV 719



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 225/481 (46%), Gaps = 7/481 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    ++ +   ++     E A   F +M++  + P   + + L+  F K G  D    +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M        +  Y+ +I+   K  D   A  +F  +K  G+VPD V YN+MI+ FGK
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +     EEM++   +PD ++Y+ L+N + +  K    L  + EM       ++ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++D + +  M + A + +  MR++G+ P+  +Y +L+    +     +A  L   M 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +E NVVTY  +I     +   ++A  L  +M   G+ PN  +Y+ +I  + KA  +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           RA  L  +L+  G++ D +LY T I     +  +  AK +++E+++     N++   T +
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GY 431
               ++G   E   +  +  +      +  F  +I+   +NK  +  ++ F ++ +  G 
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
             ++ I   +++   K  + E A  L+ +M ++G V  D+  +  L + G  K  N+LE+
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-PDRTAYTSL-MDGNFKQGNVLEA 667

Query: 492 L 492
           L
Sbjct: 668 L 668



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/475 (21%), Positives = 197/475 (41%), Gaps = 55/475 (11%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT--YSTLITCFG 65
           W      +  SV +Y +V   +  A+ +  A+ +  EM       D +   +ST   C  
Sbjct: 131 WSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVP 190

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             G+FD+                  L+S LI+L        +AI  FS++K   + P   
Sbjct: 191 GFGVFDA------------------LFSVLIDLGM----LEEAIQCFSKMKRFRVFPKTR 228

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           + N +++ F K     + +   ++M   G +P   +Y+ +++   +      A  +F EM
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  D  T N MID +G++    D    F  M+ M  +P V++YN L+  + +    
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
              +  +R M+   ++ NVV+Y+T++  + K    ++A     +M+  G+ PN  TY+++
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I    K G L  A  L  ++   GVE + V Y  +I                        
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG---------------------- 446

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                    L  A R++EA  +F +   AG + +++ +  +I  F + K     +E+  +
Sbjct: 447 ---------LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           ++  G  PD  +    +     L + E A  + +EM+E G   +  ++  ++  Y
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 71/376 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y+ ++    +    + A   + +MR+ G+ P+ YTY++LI    K G    A   
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q  V  ++V Y+ LI+         +A  +F ++ ++G++P+L +YN +I+ F K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 137 AK-------LFKE----------------------------ARLLIEEMREQGVKPDTVS 161
           AK       L  E                            A++++ EM+E G+K +++ 
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID-------VYGQLD------ 208
           Y+TL++ Y ++    E L +  EM E++  + + T  ++ID       V   +D      
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604

Query: 209 ------------------MAKD-----ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                             + KD     A  LF  M + G+ P   +Y +L+    +    
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA+ L   M    ++ +++ Y +++       + +KA + ++EM   GI P+ +   ++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724

Query: 306 IAIWGKAGKLDRAAML 321
           +    + G +D A  L
Sbjct: 725 LKKHYELGCIDEAVEL 740



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 1/245 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y   +  +   ++ E A  + +EM++ GI  +   Y+TL+  + K G     +  
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
           L +M++  +   +V +  LI+   K    SKA+  F+R+ +  G+  +   +  MI+   
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    + A  L E+M ++G+ PD  +Y++L++   +    +EAL++  +M E+   LDL 
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               ++      +  + A      M   GI P  V   ++L+ + E     EA+ L   +
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 744

Query: 256 QRKEI 260
            + ++
Sbjct: 745 MKHQL 749


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 226/487 (46%), Gaps = 5/487 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F E  + G+  +  +Y+ ++    + G    A S L QME      D+V YS +++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              ++    K + +   L+  G+ P+   YN++I+   K     EA  ++  M+ Q + P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D V Y+TL++ + ++        +F EM       D  T   MI    Q     +A +LF
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   G+ P  V+Y  L+  Y +A    EA  L   M  K +  NVVTY  ++    K 
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            E + A  L+ EM  +G++PN  TY+ +I    K G +++A  L +++  +G   D + Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++ AY ++G +A A  LL  +     QP  +     +     +G +E+   + +   D
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G + + + F  +++ +         IE+++ M + G  PD++   +++  + K R  + 
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  L+ EM E+G   +   +  ++  +  RK F     LFE + +   I +KE++ +   
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715

Query: 514 I-YERAN 519
           + YE  N
Sbjct: 716 VNYEEGN 722



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y+V++    + +Q      L +E++++G+ P++YTY+++I+   K G    A   
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M+  R+  D V+Y+ LI    K  + S    +F  +K   IVPD V Y +MI+   +
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EAR L  EM  +G+KPD V+Y+ L++ Y +  +  EA S+  +M E     ++ T
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++D   +      A+ L   M + G+ P+V +YN L+    +     +A+ L   M 
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + +TY T++  Y K  E  KA  L++ M ++G++P  +T++ ++  +  +G L+
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
               L + +   G+  +   + +++  Y     +     +   +     +P      IL 
Sbjct: 585 DGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A  ++EA ++ ++  + G     + +  +I+ F + KK+    ++FE+MR+ G+ 
Sbjct: 645 KGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704

Query: 433 PDSHI 437
            +  I
Sbjct: 705 AEKEI 709



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 213/487 (43%), Gaps = 65/487 (13%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR-----GIAPDRYTYSTL 60
            DW     R  PS+ +  +V++  + +K   +AH L  E  ++     G + DR+T   L
Sbjct: 114 FDW--ARLRRDPSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFT-ERL 170

Query: 61  ITCFGKEG----MFDSAISWLQQ----MEQDRVSGDLVLYSNLIE----------LARKL 102
           I  +   G    +FD     L +    +E  ++   L+ Y  L+           L+   
Sbjct: 171 IYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSF 230

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
                A  +F      G+  + V+YN ++++  +    KEA  L+ +M  +G  PD VSY
Sbjct: 231 DGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSY 290

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S +++ Y +  +  + L +  E+       +  T N +I    +     +A+++   M+ 
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
             I P  V Y TL+  +G++        LF  M+RK+I  + VTY +MI    ++ +  +
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L  EM ++G++P+ +TY+ +I  + KAG++  A  L  ++   G+  + V Y  ++ 
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 343 AYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              + G V  A  LLHE+     QPN       I  L + G IE+A              
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA-------------- 516

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
                                +++ E+M  AG+FPD+     ++++Y K+ E   A +L 
Sbjct: 517 ---------------------VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555

Query: 459 SEMQEEG 465
             M ++G
Sbjct: 556 RIMLDKG 562



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 167/373 (44%), Gaps = 1/373 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P    Y  ++    ++    + + LFDEM+++ I PD  TY+++I    + G    A
Sbjct: 352 RIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEA 411

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                +M    +  D V Y+ LI+   K  +  +A S+ +++   G+ P++V Y  +++ 
Sbjct: 412 RKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDG 471

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K      A  L+ EM E+G++P+  +Y+ L+N   +     +A+ +  EM+      D
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   ++D Y ++     A  L   M   G+ P++V++N L+  +  + +  +   L +
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K I  N  T+N+++K Y           + + M  +G+ P+  TY+ +I    KA 
Sbjct: 592 WMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            +  A  L +++   G  +    Y ++I  + +      A++L  E+R    I  +    
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYD 711

Query: 374 ILARAGRIEEATW 386
           I       EE  W
Sbjct: 712 IFVDVN-YEEGNW 723



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 125/245 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P+V  Y  ++  + +  + ++A+ L  EM ++G+ P+  TY+ LI    K G  +
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  +++M+      D + Y+ +++   K+ + +KA  +   +   G+ P +V +N ++
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F  + + ++   LI+ M ++G+ P+  ++++L+  Y   +     + ++  M+     
Sbjct: 575 NGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVV 634

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T NI+I  + +    K+A  L   M + G   +  SYN+L++ + + + F EA  L
Sbjct: 635 PDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKL 694

Query: 252 FRLMQ 256
           F  M+
Sbjct: 695 FEEMR 699


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/538 (23%), Positives = 257/538 (47%), Gaps = 8/538 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +LD + E+    PS  +Y  ++  +   K   LA+ L ++M   G+ P+   YSTL
Sbjct: 332 RALELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +  EG  + A   L  M    V+ D+  Y+ +I    K     +A +    ++  G+
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V +   I  + K     EA    +EM + G+ P+   Y+ L+N + +    +EALS
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F  ++ +    D+ TC+  I    +    ++A ++F  +++ G+ P V +Y++L+  + 
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     +A  L   M  K I  N+  YN ++    KS + ++A  L   M  +G+EP+++
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYST+I  + K+  +  A  LF ++ S GV+    +Y  ++    + G +  A  L  E+
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690

Query: 361 RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            Q     T+   T I    ++ +I+EA+ +F++      + D   +  +I+   +  K  
Sbjct: 691 LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 750

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               +F++M+      D+     ++  Y KL +      L+ +M  +G V  D+V + ++
Sbjct: 751 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG-VKPDEVTYGLV 809

Query: 478 SLYGARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            +Y   K+ N++E+  L + +     + K  +H ++     +   L +AS++++ M +
Sbjct: 810 -IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 225/518 (43%), Gaps = 40/518 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++  YNV++  + +  + E A  +   M   G  P+  T+  LI  + +E     A+  L
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +ME+  +    V Y  +I       D S A  +  ++  SG+ P++V Y+T+I  +   
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EAR L++ M   GV PD   Y+ +++   +  K  EA +   E+       D  T 
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL--- 254
              I  Y +     +A + F  M   G+ P+   Y  L+  + +A    EA+ +FR    
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 255 --------------------------------MQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
                                           ++ K +  +V TY+++I  + K  E EK
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L  EM  +GI PN   Y+ ++    K+G + RA  LF  +   G+E D V Y TMI 
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 343 AYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            Y +   VA A  L HE+     QP++      +    + G +E+A  +FR+    G   
Sbjct: 638 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 697

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +S F  +I+ + ++ K     ++F++M +    PD      V++ + K  + E A+ L+
Sbjct: 698 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 756

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            EMQE   +     +  ++  Y      + + +LFE++
Sbjct: 757 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 215/444 (48%), Gaps = 9/444 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y V++    +A     A  +F  +   G+ PD  T S  I    K G    A+  
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             ++++  +  D+  YS+LI    K  +  KA  +   +   GI P++  YN +++   K
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLDLT 195
           +   + AR L + M E+G++PD+V+YST+++ Y ++    EA S+F EM      P    
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              ++     + DM K A  LF  M + G   + +S+NTL+  Y ++    EA  LF+ M
Sbjct: 667 YNALVHGCCKEGDMEK-AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEM 724

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K+I  + VTY T+I  + K+ + E+A  L +EMQ R +  + +TY++++  + K G+ 
Sbjct: 725 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQS 784

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA---- 371
                LF+K+ + GV+ D V Y  +I A+ +   +  A +L  E+     + + T     
Sbjct: 785 SEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 844

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           IT L +   + EA+ +  +  + G    ++    ++  F    K      VFE ++S G 
Sbjct: 845 ITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 904

Query: 432 FPDSHIIALVLNSYGKLREFETAD 455
            PD+  +  ++N  G L + ++ D
Sbjct: 905 VPDTTTLIDLVN--GNLNDTDSED 926



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 207/486 (42%), Gaps = 39/486 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y ++   + RAK+   A   F+EM++ G+ PD    S LI  F +EG        
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG-------- 258

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                                      D  + + I   + S GI  +L+ YN +I+   K
Sbjct: 259 ---------------------------DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  +++ M   G KP++ ++  L+  Y   H    AL +  EM + N      +
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              MI+          A++L   M   G+ P+VV Y+TL+  Y       EA  L   M 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  ++  YN +I    K+ + E+A+  + E+Q RG++P+A+T+   I  + K GK+ 
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
            AA  F ++   G+  +  LY  +I  + + G +  A  +   L     +P     +   
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR++EA  VF +  + G V D+  +  +I  F +  +     E+ ++M   G  
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 591

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+  I   +++   K  + + A  L+  M E+G       +  M+  Y   ++     SL
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651

Query: 493 FERLDS 498
           F  + S
Sbjct: 652 FHEMPS 657



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 187/448 (41%), Gaps = 56/448 (12%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           +  LI  + + GM D A +     + D +   L+  ++L  +  K               
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEK--------------- 203

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
             G+VP+   Y  +     +AK   EA+L  EEM++ G+KPD  + S L++ ++      
Sbjct: 204 --GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           E L +   M     P++L T N++I    +    + A  +   M  +G  P+  ++  L+
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321

Query: 237 RVYGEAELFGEAIHLFRLMQRKE-----------------------------------IE 261
             Y      G A+ L   M+++                                    ++
Sbjct: 322 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            NVV Y+T+I  Y      E+A  L+  M   G+ P+   Y+ II+   KAGK++ A+  
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----R 377
             +++  G++ D V +   I+ Y + G +  A +   E+     +P     T+L     +
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           AG + EA  +FR     G + D+      I    +N +    ++VF +++  G  PD   
Sbjct: 502 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
            + +++ + K  E E A +L+ EM  +G
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKG 589



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++F YN ++  + ++   + A  LFD M ++G+ PD  TYST+I  + K      A S
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    V     +Y+ L+    K  D  KA+++F  +   G    L ++NT+I+ + 
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYC 709

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+   +EA  L +EM  + + PD V+Y+T+++ + +  K  EA  +F EM E N  +D  
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   ++  Y +L  + +   LF  M   G+ P  V+Y  ++  + + +   EA  L   +
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +      ++ +I    K  +  +A+ L+ EM   G++P+    ST++  + +AGK+
Sbjct: 830 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 889

Query: 316 DRAAMLFQKLRSSGVEID 333
           D A  +F+ ++S G+  D
Sbjct: 890 DEATRVFEGVKSLGLVPD 907



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/291 (19%), Positives = 115/291 (39%), Gaps = 39/291 (13%)

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE------------ 261
           D  +WS  +MG+   + S++ L      +ELFG A  +   M R                
Sbjct: 89  DFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWF 148

Query: 262 -----QNVVTYNTMIKIYGKSLEHEKATNL------------------MQEMQNRGIEPN 298
                 + V ++ +I  Y +    ++A N+                  ++ M  +G+ PN
Sbjct: 149 RNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPN 208

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG---LVAHAKR 355
             TY+ I A   +A +++ A + F++++ +G++ D      +I  + R G    V   K 
Sbjct: 209 TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKD 268

Query: 356 LLHELRQP-NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           ++     P N I     I  L + G++E+A  + +     G   +   F  +IE + R  
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                +E+ ++M      P +     ++N     ++   A+ L  +M   G
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 218/448 (48%), Gaps = 4/448 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P++   N+++  + +A++ + A  +F  +  +   PD  T+ +LI   G+ G  
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKV 497

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M     + + V+Y++LI    K         I+  +   G  PDL+  N  
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNY 557

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R L EE++ QG+ PD  SYS L++  V+     +   +F EM E   
Sbjct: 558 MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGL 617

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    NI+ID + +      A +L   M+  G+ P+VV+Y +++    + +   EA  
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYM 677

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   + K ++ NVV Y+++I  +GK    ++A  +++E+  +G+ PN  T++ ++    
Sbjct: 678 LFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALV 737

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           KA ++D A + FQ +++     + V Y  M+    +V     A     E++    +PNTI
Sbjct: 738 KAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTI 797

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I+ LAR G + EA  +F +   +G + D + +  MIE  S   K  +   +FE+ 
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEET 857

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETA 454
           R  G    S    ++L++  K    E A
Sbjct: 858 RLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/565 (22%), Positives = 252/565 (44%), Gaps = 73/565 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+AYN ++       ++  A+ L +  +++G  P    Y+ ++TC G++G  + A+  
Sbjct: 340 PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRI 399

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M+ D  + +L  Y+ LI++  K  +   A+ +   +K +G+ P+++  N MI+   K
Sbjct: 400 LEAMKMD-AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCK 458

Query: 137 AKLFKEA-----------------------------------RLLIEEMREQGVKPDTVS 161
           A+   EA                                    +L E+M + G  P+ V 
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVV 518

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++L+  + +  +  +   ++ EM    C  DL   N  +D   +    +    LF  ++
Sbjct: 519 YTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIK 578

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P V SY+ L+    +     +   LF  M+ + +  +   YN +I  + KS +  
Sbjct: 579 AQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVN 638

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  L++EM+ +G++P  +TY ++I    K  +LD A MLF++ +S  V+++ V+Y ++I
Sbjct: 639 KAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             + +VG +  A  +L EL Q    P                 TW               
Sbjct: 699 DGFGKVGRIDEAYLILEELMQKGLTPNTY--------------TW--------------- 729

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              C+++   + ++    +  F+ M++    P+    ++++N   K+R+F  A   + EM
Sbjct: 730 --NCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEM 787

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYERAN 519
           Q++G   +   +  M+S  G  +  N+LE+  LFER  S   I     ++ +      AN
Sbjct: 788 QKQGLKPNTITYTTMIS--GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNAN 845

Query: 520 RLNDASRIM--NRMNKRRTFNSSLV 542
           +  DA  +    R+   R ++ + V
Sbjct: 846 KAMDAYILFEETRLKGCRIYSKTCV 870



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 221/456 (48%), Gaps = 5/456 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY  ++  +  A + +    L  +M++ G     + ++TLI  F +EG  D+A
Sbjct: 197 KFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAA 256

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +S L +M+ +  + DLVLY+  I+   K+     A   F  LKS G+VPD V + +MI V
Sbjct: 257 LSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGV 316

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA+   EA  L EE+      P   +Y+T++  Y    KF EA S+        C   
Sbjct: 317 LCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPS 376

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N ++   G+    ++A R+  +M KM   P++ SYN L+ +  +A     A+ +  
Sbjct: 377 VIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQD 435

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  N++T N MI    K+   ++A ++   + ++   P+++T+ ++I   G+ G
Sbjct: 436 SMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHG 495

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
           K++ A ML++K+  SG   + V+Y ++I  + + G         K ++H    P+ +   
Sbjct: 496 KVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLN 555

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             +  + +AG IE+   +F +    G   D+  +  +I    +     +  ++F +M+  
Sbjct: 556 NYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQ 615

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D+    +V++ + K  +   A  L  EM+ +G
Sbjct: 616 GLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 221/472 (46%), Gaps = 8/472 (1%)

Query: 1   RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R++  L+ I EE   A + PS      ++ + +++++   A G+ + MR+    P    Y
Sbjct: 146 RNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAY 205

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           +TLI         D  ++ L+QM++      + L++ LI +  +      A+S+   +KS
Sbjct: 206 TTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKS 265

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           +    DLV YN  I+ FGK      A     E++ QG+ PD V++++++ +  +  +  E
Sbjct: 266 NSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDE 325

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A+ +F E++       +   N MI  YG +    +A  L    ++ G  PSV++YN +L 
Sbjct: 326 AVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILT 385

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
             G      EA+ +   M + +   N+ +YN +I +  K+ E E A  +   M+  G+ P
Sbjct: 386 CLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFP 444

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA---- 353
           N IT + +I    KA +LD A  +F  L       D V + ++I    R G V  A    
Sbjct: 445 NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLY 504

Query: 354 KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           +++L   + PN +   + I    + GR E+   ++++    G   D+ +    ++   + 
Sbjct: 505 EKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +      +FE++++ G  PD    +++++   K    +    L+ EM+E+G
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 197/465 (42%), Gaps = 44/465 (9%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  + +   S  AYN +L  + R +  E    + +EM   G  P   T   ++  F K 
Sbjct: 121 WVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVK- 179

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                                          +RKL +   A  +   ++     P   AY
Sbjct: 180 -------------------------------SRKLRE---AFGVIETMRKFKFRPAYSAY 205

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            T+I     A        L+ +M+E G +     ++TL+ ++    +   ALS+  EM  
Sbjct: 206 TTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKS 265

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            +   DL   N+ ID +G++     A + F  ++  G+ P  V++ +++ V  +AE   E
Sbjct: 266 NSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDE 325

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ LF  +   +    V  YNTMI  YG   +  +A +L++  + +G  P+ I Y+ I+ 
Sbjct: 326 AVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILT 385

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELRQ--- 362
             G+ GK++ A  + + ++   ++  P L  Y  +I    + G +  A ++   +++   
Sbjct: 386 CLGRKGKVEEALRILEAMK---MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGL 442

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PN I     I  L +A R++EA  +F          D   F  +I+   R+ K  +   
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYM 502

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           ++EKM  +G  P++ +   ++ ++ K    E    +Y EM   GC
Sbjct: 503 LYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 158/311 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y++++  +++    +  + LF EM+++G+  D   Y+ +I  F K G  + A  
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQ 642

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M+   +   +V Y ++I+   K+    +A  +F   KS  +  ++V Y+++I+ FG
Sbjct: 643 LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG 702

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EA L++EE+ ++G+ P+T +++ LL+  V+  +  EAL  F  M  + CP +  
Sbjct: 703 KVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV 762

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T +IM++   ++     A   +  M+K G+ P+ ++Y T++          EA  LF   
Sbjct: 763 TYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERF 822

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +      +   YN MI+    + +   A  L +E + +G    + T   ++    KA  L
Sbjct: 823 KSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCL 882

Query: 316 DRAAMLFQKLR 326
           ++AA++   LR
Sbjct: 883 EQAAIVGAVLR 893



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 100/207 (48%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y+ ++    +  + + A+ + +E+ Q+G+ P+ YT++ L+    K    D A+   
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCF 749

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q M+  +   + V YS ++    K+  ++KA   +  ++  G+ P+ + Y TMI+   + 
Sbjct: 750 QNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARV 809

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA+ L E  +  G  PD+  Y+ ++      +K ++A  +F E     C +   TC
Sbjct: 810 GNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTC 869

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMG 224
            +++D   + D  + A  +   +R+M 
Sbjct: 870 VVLLDALHKADCLEQAAIVGAVLREMA 896


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 220/433 (50%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    +N +++ +    +   A  L D M + G  PD  TY++++    + G    A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++ME+  V  D+  YS +I+   +      AIS+F  +++ GI   +V YN+++   
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA  + +  LL+++M  + + P+ ++++ LL+++V+  K  EA  ++ EM       ++
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y   +   +A+ +   M +    P +V++ +L++ Y   +   + + +FR 
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + ++ +  N VTY+ +++ + +S + + A  L QEM + G+ P+ +TY  ++      GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A  +F+ L+ S +++  V+Y T+I    + G V  A  L   L     +PN +    
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+ L + G + EA  + R+  + G   +   +  +I    R+       ++ E+M+S G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573

Query: 431 YFPDSHIIALVLN 443
           +  D+  I +V++
Sbjct: 574 FSADASSIKMVID 586



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 241/523 (46%), Gaps = 10/523 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWEL----AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           S+   NV  R  LR+   ++    A  LF EM +    P    +S   +   +   F+  
Sbjct: 48  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-N 132
           + + +Q+E + ++ ++   + +I    +      A S+  ++   G  PD   +NT+I  
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +F + K+  EA +L++ M E G +PD V+Y++++N    +     AL +  +M E N   
Sbjct: 168 LFLEGKV-SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +ID   +      A  LF  M   GI  SVV+YN+L+R   +A  + +   L 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  +EI  NV+T+N ++ ++ K  + ++A  L +EM  RGI PN ITY+T++  +   
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            +L  A  +   +  +    D V + ++I  Y  V  V    ++   + +   +      
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           +IL     ++G+I+ A  +F++    G + D+  +G +++    N K    +E+FE ++ 
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +       +   ++    K  + E A +L+  +  +G   +   +  M+S    +   + 
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              L  +++ D N      ++ +   + R   L  +++++  M
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 189/396 (47%), Gaps = 36/396 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V ++D + E     P V  YN ++  + R+    LA  L  +M +R +  D +TYST+I
Sbjct: 177 AVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI----------------------ELA 99
               ++G  D+AIS  ++ME   +   +V Y++L+                      E+ 
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 100 RKLSDYSKAISIFSR-------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
             +  ++  + +F +             + + GI P+++ YNT+++ +       EA  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           ++ M      PD V++++L+  Y    +  + + VF  +++     +  T +I++  + Q
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               K A+ LF  M   G+ P V++Y  LL    +     +A+ +F  +Q+ +++  +V 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I+   K  + E A NL   +  +G++PN +TY+ +I+   K G L  A +L +K+ 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             G   +   Y T+I A+ R G +  + +L+ E++ 
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 91/183 (49%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y+++++   ++ + +LA  LF EM   G+ PD  TY  L+      G  + A+   + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++ ++   +V+Y+ +IE   K      A ++F  L   G+ P+++ Y  MI+   K    
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA +L+ +M E G  P+  +Y+TL+  ++ +     +  +  EM       D ++  ++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 201 IDV 203
           ID+
Sbjct: 585 IDM 587



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 60/127 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++++    +  Y  ++  + +  + E A  LF  +  +G+ P+  TY+ +I+   K+G  
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++ME+D  + +   Y+ LI    +  D + +  +   +KS G   D  +   +
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 131 INVFGKA 137
           I++   A
Sbjct: 585 IDMLLSA 591


>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 410

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 178/346 (51%), Gaps = 1/346 (0%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  +  LA  +F+ M + G+AP  + Y+ L++ + K+G+   A +  + M++   S +++
Sbjct: 42  REGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVL 101

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+ LI    K +      + +F  +K +G+ P+ + YN M+N      LF  A  +++E
Sbjct: 102 TYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKE 161

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M+     P+ +SY+T++N    + +  EA+ +F EM E+    +  T N ++  Y +   
Sbjct: 162 MKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGR 221

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  LF  M   G  P + +YNT++ + G   LF EA  +F  MQRK    + VTYNT
Sbjct: 222 YEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNT 281

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M+  Y K     +A +L++ M+  G  P+  TY+ ++   GKAG    A  +F +L+++G
Sbjct: 282 MLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAG 341

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
              + V +  +I  Y R+G    A+R   E+R    +P  TA   L
Sbjct: 342 HSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGL 387



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 180/339 (53%), Gaps = 1/339 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI-TCFGKEGMF 70
           +A  +PSV AY  +L    +    + A  LF+ M+++G +P+  TY+TLI  C  +    
Sbjct: 58  KAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRL 117

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              +   ++M+Q  V  + + Y+ ++     LS +  A  I   +K+   +P++++Y TM
Sbjct: 118 PDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTM 177

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN  G++    EA  L EEM+E G  P++ +Y++LL  Y    ++ +A+ +F  M +  C
Sbjct: 178 INSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGC 237

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL T N +ID+ G+  +  +A+ +F  M++ G  P  V+YNT+L  Y +    G A  
Sbjct: 238 IPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARD 297

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M+R     ++ TYN ++   GK+    +A  +  E++  G  PN +++S +I ++G
Sbjct: 298 LLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYG 357

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           + G  + A   + ++R++G   +   Y  ++ +Y   G+
Sbjct: 358 RLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGM 396



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 183/383 (47%), Gaps = 32/383 (8%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A  IF  +  +G+ P + AY  +++ + K  L KEA  L E M+E+G  P+ ++Y+TL+N
Sbjct: 49  AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108

Query: 168 LYVEN-HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
              +  ++  + + +F EM +     +  T N M++    L +   A ++   M+ +   
Sbjct: 109 ACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCL 168

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P+V+SY T++   G +    EA+ LF  M+      N  TYN+++K Y +   +EKA  L
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              M++ G  P+  TY+T+I + G+ G    A  +F +++  G   D V Y TM+ AY +
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSK 288

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
                 A+ LL  +++    P                               D+  +  +
Sbjct: 289 WSRRGRARDLLKTMKRAGCTP-------------------------------DLWTYNIL 317

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           ++   +    +  +++F ++++AG+ P+    + ++N YG+L  FE A+  + EM+  GC
Sbjct: 318 LDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGC 377

Query: 467 VFSDQVHFQMLSLYGARKDFNML 489
           V +   +  +++ Y     + +L
Sbjct: 378 VPNATAYCGLMNSYSHHGMYKVL 400



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 188/379 (49%), Gaps = 9/379 (2%)

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           T+I+  G+EG    A    + M +  V+  +  Y+ L+    K     +A ++F  +K  
Sbjct: 35  TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94

Query: 119 GIVPDLVAYNTMINVFGK-AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           G  P+++ YNT+IN   K A    +   L EEM++ GV+P+ ++Y+ ++N  V    F  
Sbjct: 95  GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A  +  EM  VNC  ++ +   MI+  G+     +A  LF  M+++G  P+  +YN+LL+
Sbjct: 155 ASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLK 214

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            Y     + +A+ LF  M+ +    ++ TYNT+I + G+     +A  +  EMQ +G  P
Sbjct: 215 AYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           + +TY+T++  + K  +  RA  L + ++ +G   D   Y  ++ A  + G  + A ++ 
Sbjct: 275 DRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIF 334

Query: 358 HELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           HEL+     PN +     I +  R G  EEA   + +    G V + + +  ++  +S +
Sbjct: 335 HELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHH 394

Query: 414 KKYANVIEVFEKMRSAGYF 432
             Y    +V   +RS  YF
Sbjct: 395 GMY----KVLCCIRSLSYF 409



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 136/264 (51%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+   YN ++   +    ++ A  +  EM+     P+  +Y+T+I   G+ G  
Sbjct: 128 KQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRL 187

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++   S +   Y++L++   +   Y KA+ +F  ++  G +PDL  YNT+
Sbjct: 188 DEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTV 247

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I++ G+  LF EA  +  EM+ +G  PD V+Y+T+L+ Y +  +   A  +   M    C
Sbjct: 248 IDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGC 307

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL T NI++D  G+   A +A ++F  ++  G  P++VS++ L+ +YG    F EA  
Sbjct: 308 TPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAER 367

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIY 274
            +  M+      N   Y  ++  Y
Sbjct: 368 AWVEMRATGCVPNATAYCGLMNSY 391



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 6/297 (2%)

Query: 177 EALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
           +AL VF  + E +   L    C  +I + G+      A  +F  M K G+ PSV +Y  L
Sbjct: 12  QALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTAL 71

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRG 294
           L  Y +  L  EA  LF  M+ K    NV+TYNT+I    K +        L +EM+  G
Sbjct: 72  LSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAG 131

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           ++PN ITY+ ++         D A+ + +++++     + + Y TMI +  R G +  A 
Sbjct: 132 VQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAV 191

Query: 355 RLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L  E+    R PN+    + +   AR GR E+A  +F    D G + D+  +  +I++ 
Sbjct: 192 ELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMC 251

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            R   +A    VF +M+  G  PD      +L++Y K      A DL   M+  GC 
Sbjct: 252 GRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCT 308



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 126/229 (55%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y  ++ ++ R+ + + A  LF+EM++ G +P+ +TY++L+  + +EG ++ A+  
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME +    DL  Y+ +I++  +   +++A  +F  ++  G  PD V YNTM++ + K
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSK 288

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 AR L++ M+  G  PD  +Y+ LL+   +     EA+ +F E+       +L +
Sbjct: 289 WSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVS 348

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            + +I++YG+L   ++A+R +  MR  G  P+  +Y  L+  Y    ++
Sbjct: 349 FSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMY 397



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 124/252 (49%), Gaps = 5/252 (1%)

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           T++ + G     G A  +F  M +  +  +V  Y  ++  Y K    ++A  L + M+ +
Sbjct: 35  TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94

Query: 294 GIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           G  PN +TY+T+I A   +A +L     LF++++ +GV+ + + Y  M+ A   + L   
Sbjct: 95  GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A ++L E++     PN I   T I  L R+GR++EA  +F +  + G   +   +  +++
Sbjct: 155 ASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLK 214

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            ++R  +Y   + +F  M   G  PD +    V++  G+   F  A+ ++ EMQ +GC  
Sbjct: 215 AYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274

Query: 469 SDQVHFQMLSLY 480
               +  ML  Y
Sbjct: 275 DRVTYNTMLDAY 286



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 11/249 (4%)

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
           TII+I G+ GKL  A  +F+ +  +GV      Y  ++  Y + GL+  A  L   +++ 
Sbjct: 35  TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94

Query: 363 ---PNTIPRETAITILA-RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              PN +   T I     RA R+ +   +F +   AG   +   + CM+        +  
Sbjct: 95  GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             ++ ++M++    P+      ++NS G+    + A +L+ EM+E G   +   +  +L 
Sbjct: 155 ASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLK 214

Query: 479 LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK----- 533
            Y     +     LF  ++ +  I     ++ V  +  R     +A  +   M +     
Sbjct: 215 AYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274

Query: 534 -RRTFNSSL 541
            R T+N+ L
Sbjct: 275 DRVTYNTML 283



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    YN +L    +  +   A  L   M++ G  PD +TY+ L+   GK G    A+ 
Sbjct: 273 TPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQ 332

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +++    S +LV +S LI +  +L  + +A   +  ++++G VP+  AY  ++N + 
Sbjct: 333 IFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYS 392

Query: 136 KAKLFK 141
              ++K
Sbjct: 393 HHGMYK 398


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 214/435 (49%), Gaps = 4/435 (0%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + YN V+    R  +   A  L ++MR  GI+P  Y+YS LI    K+G  + A+  +++
Sbjct: 324 YCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEE 383

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q  V   LV YS+L +   K      ++S+F  L + G   D+++YNT+IN F   + 
Sbjct: 384 MVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRD 443

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
              A  L+ EMR  G  P++ +++ L++ + +  +  +AL VF  M +V   L++ TCNI
Sbjct: 444 MGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNI 503

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           M D + +     +A +L   ++ +GI P+  +YN +++   + +   +A  +  +M +  
Sbjct: 504 MADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNN 563

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +    + YNT+I  Y K     KA  L  +M   GI P+ +TY+ +I ++    K+  A 
Sbjct: 564 VFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAY 623

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            LF+++   G+  D +++  +I  + +VG +  A  L  E+ Q    PN +     I   
Sbjct: 624 YLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGY 683

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +  R+++A ++F +        D   +  +I  +        V E+F +M+  G FP+ 
Sbjct: 684 FKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNY 743

Query: 436 HIIALVLNSYGKLRE 450
              A +    G +RE
Sbjct: 744 TAYATLGLHLGVVRE 758



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 206/469 (43%), Gaps = 5/469 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  Y   +  + RA   E A  L  ++R R    + Y Y+ +I  F + G    A  
Sbjct: 285 SPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFE 344

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M    +S     YS LI+   K     KA+ +   +  S + P LV Y+++ +   
Sbjct: 345 LLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLC 404

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+ L + +  +   +  +G K D +SY+TL+N +V       A  +  EM       +  
Sbjct: 405 KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSF 464

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I  + +      A  +F  M K+G+  ++ + N +   +     F EA+ L   +
Sbjct: 465 TFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEV 524

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           Q   I  N  TYN +IK   K  + EKA  ++  M    + P AI Y+T+I  + K    
Sbjct: 525 QDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNP 584

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A +L+ K+   G+    V Y  +I  +     +  A  L  E+ +   +P E   T +
Sbjct: 585 TKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCI 644

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + G ++ A  ++ +    G+  ++  + C+I+ + + K+      +F KM+    
Sbjct: 645 IAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNV 704

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            PD      ++  Y  L   +   ++++EM+E G VF +   +  L L+
Sbjct: 705 TPDGLTYTALIFGYQSLGYSDRVREMFNEMKENG-VFPNYTAYATLGLH 752



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 228/493 (46%), Gaps = 48/493 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--C---FGKEGMFDS 72
           ++ + N +L     A Q E    LF+E++  G +P+ +TY+ ++   C   FGK      
Sbjct: 212 NILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVK 271

Query: 73  AISWLQQMEQDRVSGDLVLY---------SNLIELARKL-------------SDYSKAIS 110
           A   L++ME +  S  +V Y         +  +E A +L               Y+  I 
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331

Query: 111 IFSR-------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            F R             ++S GI P   +Y+ +I+   K    ++A  LIEEM +  VKP
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKP 391

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG-QLDMAKDADRL 216
             V+YS+L +   ++     +LS+F  +       D+ + N +I+ +  Q DM   A +L
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG-SACKL 450

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              MR  G  P+  ++N L+  + + +   +A+ +F +M +  ++ N+ T N M   + +
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                +A  L+ E+Q+ GI PN+ TY+ +I    K  K ++A  +   +  + V    + 
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570

Query: 337 YQTMIVAYER-----VGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
           Y T+I  Y +       L+ +AK L   +  P+ +     I + +   +++EA ++F++ 
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGI-PPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G V D  +F C+I  F +     +   ++E+M   G  P+      +++ Y K++  
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689

Query: 452 ETADDLYSEMQEE 464
           + AD L+++M+ +
Sbjct: 690 DKADFLFNKMKRD 702



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 155/326 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y   V +YN ++   +  +    A  L  EMR  G  P+ +T++ LI  F K    D A+
Sbjct: 424 YKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKAL 483

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M +  V  ++   + + +   +   + +A+ + + ++  GIVP+   YN +I   
Sbjct: 484 EVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWL 543

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +  ++A  ++  M +  V P  + Y+TL++ Y +     +AL ++A+M +V  P  +
Sbjct: 544 CKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSI 603

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  ++I+++      ++A  LF  M K G+ P  + +  ++  + +      A  L+  
Sbjct: 604 VTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEE 663

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +     NVVTY  +I  Y K    +KA  L  +M+   + P+ +TY+ +I  +   G 
Sbjct: 664 MSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGY 723

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTM 340
            DR   +F +++ +GV  +   Y T+
Sbjct: 724 SDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/482 (20%), Positives = 204/482 (42%), Gaps = 34/482 (7%)

Query: 29  VLRAKQWELAH--GLFDEMRQRGIAPDRYTYSTLITCFGKEGM-------FDSAISWLQQ 79
           V +   W+LA     F  +   G +   Y +  +I      G+           IS+ ++
Sbjct: 94  VFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKE 153

Query: 80  MEQD---------------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           +  D                + G +++ + LI++  + +    A  +F + +  G+  ++
Sbjct: 154 VNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNI 213

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV-----ENHKFVEAL 179
           ++ N ++N F +A   +  R L EE+++ G  P+  +Y+ ++N Y      +N   V+A 
Sbjct: 214 LSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKAT 273

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            V  EM        + T    I    +    + A RL   +R      +   YN ++  +
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                  EA  L   M+   I     +Y+ +I    K  + EKA +L++EM    ++P+ 
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSL 393

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +TYS++     K+G  + +  +F  L + G + D + Y T+I  +     +  A +L+HE
Sbjct: 394 VTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHE 453

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +R     PN+      I    +  R+++A  VF      G   +I     M + F+R   
Sbjct: 454 MRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGH 513

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   +++  +++  G  P+S+   +V+    K ++ E A ++   M +   VF   +H+ 
Sbjct: 514 FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNN-VFPCAIHYN 572

Query: 476 ML 477
            L
Sbjct: 573 TL 574


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 221/492 (44%), Gaps = 42/492 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI------------------------- 50
           SP+ + Y +++    RA + ELA   F ++ + G+                         
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 51  -----------APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR--VSGDLVLYSNLIE 97
                       PD ++Y+ L+     +G    A   L+ M +     S D+V Y+ +I+
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K  D +KA  +F  +   GI PDLV Y+++++   KA+   +A   + +M  +GV P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D  +Y+ L+  Y    ++ EA+ VF EM   +   D+   N ++    +    K+A  +F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            +M   G +P V SY  +L  Y       +   LF LM    I   + T+N +IK Y   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +KA  +  EM++ G++P+ +TY T+IA   + GK+D A   F ++   GV  D   Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  +   G +  AK L+ E+     + + +   + I  L + GR+ +A  +F    +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D  V+  +++ +    K    + VF+ M SAG  P+      ++N Y K+   + 
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 454 ADDLYSEMQEEG 465
              L+ EM ++G
Sbjct: 590 GLSLFREMLQKG 601



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 245/559 (43%), Gaps = 41/559 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V AYN V+    +      A  LF EM QRGI PD  TYS+++    K    D A +
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA 277

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L+QM    V  D   Y+NLI        + +A+ +F  ++   I+PD+VA NT++    
Sbjct: 278 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M        + 
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F  M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR---------------------- 293
             + +  +   Y+ +I+ +       KA  L+ E+ N                       
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 294 -------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                        G+ P+A+ Y+ ++  +   GK+++A  +F  + S+G+E + V Y T+
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  ++G 
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +   +  ++    +N+ +   I +F+++R+     D   +  ++    + R  E A D
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIY 515
           L++ +   G V     +  M++           E +F  + ++    + + L+HVV  + 
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 516 ERANRLNDASRIMNRMNKR 534
           ++ N +  A   ++++++R
Sbjct: 758 KK-NEIVRAGAYLSKIDER 775



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 131/292 (44%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +  ++ N+ +  +   A  +FD     G+ PD   Y+ L+  +   G  + A+     M 
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V Y  L+    K+    + +S+F  +   GI P  + YN +I+   +A    
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A++   EM E G+  +  +YS +L    +N  F EA+ +F E+  +N  +D+ T N MI
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 683

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               Q    ++A  LF S+ + G+ P  V+Y+ ++    +  L  EA  +F  MQ    E
Sbjct: 684 AGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 743

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    N +++   K  E  +A   + ++  R      +T   ++ ++   G
Sbjct: 744 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 95/188 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   YN+++  +  A +   A   F EM + GIA ++ TYS ++    K   FD AI  
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    V  D++  + +I    +     +A  +F+ +  SG+VP  V Y+ MI    K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +EA  +   M+  G +PD+   + ++   ++ ++ V A +  ++++E N  L+  T
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 197 CNIMIDVY 204
             +++D++
Sbjct: 784 AMLLVDLF 791



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+V  Y  ++    +  + +    LF EM Q+GI P    Y+ +I    + G    
Sbjct: 565 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 624

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A     +M +  ++ +   YS ++    K   + +AI +F  L++  +  D++  NTMI 
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              + +  +EA+ L   +   G+ P  V+YS ++   ++     EA  +F+ M    C  
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 744

Query: 193 D 193
           D
Sbjct: 745 D 745


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 220/433 (50%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    +N +++ +    +   A  L D M + G  PD  TY++++    + G    A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++ME+  V  D+  YS +I+   +      AIS+F  +++ GI   +V YN+++   
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA  + +  LL+++M  + + P+ ++++ LL+++V+  K  EA  ++ EM       ++
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y   +   +A+ +   M +    P +V++ +L++ Y   +   + + +FR 
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + ++ +  N VTY+ +++ + +S + + A  L QEM + G+ P+ +TY  ++      GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A  +F+ L+ S +++  V+Y T+I    + G V  A  L   L     +PN +    
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+ L + G + EA  + R+  + G   +   +  +I    R+       ++ E+M+S G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573

Query: 431 YFPDSHIIALVLN 443
           +  D+  I +V++
Sbjct: 574 FSADASSIKMVID 586



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 241/523 (46%), Gaps = 10/523 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWEL----AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           S+   NV  R  LR+   ++    A  LF EM +    P    +S   +   +   F+  
Sbjct: 48  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-N 132
           + + +Q+E + ++ ++   + +I    +      A S+  ++   G  PD   +NT+I  
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +F + K+  EA +L++ M E G +PD V+Y++++N    +     AL +  +M E N   
Sbjct: 168 LFLEGKV-SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +ID   +      A  LF  M   GI  SVV+YN+L+R   +A  + +   L 
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  +EI  NV+T+N ++ ++ K  + ++A  L +EM  RGI PN ITY+T++  +   
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            +L  A  +   +  +    D V + ++I  Y  V  V    ++   + +   +      
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           +IL     ++G+I+ A  +F++    G + D+  +G +++    N K    +E+FE ++ 
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +       +   ++    K  + E A +L+  +  +G   +   +  M+S    +   + 
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              L  +++ D N      ++ +   + R   L  +++++  M
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 189/396 (47%), Gaps = 36/396 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V ++D + E     P V  YN ++  + R+    LA  L  +M +R +  D +TYST+I
Sbjct: 177 AVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI----------------------ELA 99
               ++G  D+AIS  ++ME   +   +V Y++L+                      E+ 
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 100 RKLSDYSKAISIFSR-------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
             +  ++  + +F +             + + GI P+++ YNT+++ +       EA  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           ++ M      PD V++++L+  Y    +  + + VF  +++     +  T +I++  + Q
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               K A+ LF  M   G+ P V++Y  LL    +     +A+ +F  +Q+ +++  +V 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y T+I+   K  + E A NL   +  +G++PN +TY+ +I+   K G L  A +L +K+ 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             G   +   Y T+I A+ R G +  + +L+ E++ 
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y+++++   ++ + +LA  LF EM   G+ PD  TY  L+      G  + A+   + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++ ++   +V+Y+ +IE   K      A ++F  L   G+ P+++ Y  MI+   K    
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA +L+ +M E G  P+  +Y+TL+  ++ +     +  +  EM       D ++  ++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 201 IDVY--GQLD 208
           ID+   G+LD
Sbjct: 585 IDMLLSGELD 594



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 62/131 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++++    +  Y  ++  + +  + E A  LF  +  +G+ P+  TY+ +I+   K+G  
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++ME+D  + +   Y+ LI    +  D + +  +   +KS G   D  +   +
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 131 INVFGKAKLFK 141
           I++    +L K
Sbjct: 585 IDMLLSGELDK 595


>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 743

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 216/471 (45%), Gaps = 5/471 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + E  +   +V++YN++ + +   +QW +   L  +M   G  PD YT++TLI    K  
Sbjct: 1   MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKAD 60

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A    Q M +  V    + YS ++ L +K      A   FS +  SGI   + AY+
Sbjct: 61  YADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYS 119

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MI ++ +   F++A  ++E+M    + PD  ++   +N Y +  K  EA  +   M  +
Sbjct: 120 AMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERL 179

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L +   N MI  YG+  + + A RLF  M++ G++P  V+Y+ ++   G A    +A
Sbjct: 180 GMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDA 239

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +  F+ M+R  I      +NT+I +YGK+        ++ +M+N G  P++ T   ++  
Sbjct: 240 LDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRA 299

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
           + +AG+  +   +   LR +G   D   Y T++  Y +  L   A  +   +R+    P+
Sbjct: 300 YERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPK 359

Query: 369 E----TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           E    + I     AG  E+AT VFR    AG V  +     MI +           E+F 
Sbjct: 360 EYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFR 419

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
            +RS+    D     +++N Y +    E A  +Y  M+EE  +  D   + 
Sbjct: 420 SLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYH 470



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 247/512 (48%), Gaps = 6/512 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            V  YN ++    +A  +E A  LF++M++ G+ PD  TYS +I   G+ G    A+ + 
Sbjct: 184 GVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYF 243

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q M++  +      ++ LI L  K  +    + + + +K+ G  PD    + ++  + +A
Sbjct: 244 QAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERA 303

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              K+   ++  +RE G   DT SY TLL++Y++ +   EALSVF+ M +         C
Sbjct: 304 GQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMC 363

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +I       M +DA  +F  M+  G+ PS+ +  T++ V+G      +A  LFR ++ 
Sbjct: 364 RSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRS 423

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLD 316
              + +++ YN +I +Y +   HE+A  + + M+   G+ P++ TY +++ +  K     
Sbjct: 424 SVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQT 483

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  ++ +LR+S VE+D V+   ++    R   +    ++  E+      PNTI     I
Sbjct: 484 QAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMI 543

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            +  ++G ++ A    + A   G V D   F  +I  + + + + N+     +M++AG+ 
Sbjct: 544 DLYGKSGMLDRARDASKLAQQLG-VADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHG 602

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
                   VL++YGK    +  +D+ + M++ G       +  ++++YG       +E+L
Sbjct: 603 GSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEAL 662

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           F ++  +  I  +  ++ +   Y  A+  + A
Sbjct: 663 FHKMQEEGFIPDRWTYNTMIRTYGYADYPDKA 694



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 185/414 (44%), Gaps = 70/414 (16%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA +     +Y  +L   L+    + A  +F  MR+ G+AP  Y   +LI      GMF+
Sbjct: 318 EAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFE 377

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +  + M+   V   L     +I +     D  +A  +F  L+SS    D++AYN +I
Sbjct: 378 DATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVII 437

Query: 132 NVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVF-------A 183
           NV+ +  + +EA  + + M E+ G+ PD+ +Y ++L +  + +   +A  ++        
Sbjct: 438 NVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDV 497

Query: 184 EMNEVNCPLDLTTC----------------------------NIMIDVYGQ---LDMAKD 212
           E++EV C   L TC                            N+MID+YG+   LD A+D
Sbjct: 498 ELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARD 557

Query: 213 ADRL-------------------------------FWSMRKMGIDPSVVSYNTLLRVYGE 241
           A +L                                W M+  G   S+ +YN +L  YG+
Sbjct: 558 ASKLAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGK 617

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    +   +   M++  ++ ++ +YN +I IYG+  +  +   L  +MQ  G  P+  T
Sbjct: 618 AGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWT 677

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           Y+T+I  +G A   D+A   F+ ++ SG+  D V Y  ++ A+E+ G +  A R
Sbjct: 678 YNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAAR 731



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 138/307 (44%), Gaps = 7/307 (2%)

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V SYN + ++ G  + +     L   M       +  T+NT+I    K+   + AT   
Sbjct: 10  NVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAF 69

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           Q M  +G++P  +TYS ++ ++ K GK++ A + F  +  SG+++    Y  MI  Y R 
Sbjct: 70  QMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAMIAIYTRC 128

Query: 348 GLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A++++ ++      P        +    + G+IEEA  +       G    +  +
Sbjct: 129 GFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGY 188

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             MI  + +   Y   + +FEKM+ AG  PD    + ++ + G+  +   A D +  M+ 
Sbjct: 189 NSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKR 248

Query: 464 EGCVFSDQVHFQMLSLYG-ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
            G + +      ++SLYG AR    ++  L +  +     + + L  VV   YERA +  
Sbjct: 249 LGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRA-YERAGQTK 307

Query: 523 DASRIMN 529
              ++++
Sbjct: 308 KVVQVLS 314



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  + A +  S+ AYN VL    +A   +    +   M + G+  D  +Y+ LI  +G+ 
Sbjct: 594 WEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRH 653

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY-SKAISIFSRLKSSGIVPDLVA 126
                  +   +M+++    D   Y+ +I      +DY  KA+  F  ++ SGI+PD V 
Sbjct: 654 TKIAEMEALFHKMQEEGFIPDRWTYNTMIR-TYGYADYPDKAVDTFKMMQDSGIMPDRVT 712

Query: 127 YNTMINVFGKAKLFKEA 143
           Y  ++  F KA    EA
Sbjct: 713 YVMLVAAFEKAGNLLEA 729



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 32/72 (44%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + P  + YN ++R    A   + A   F  M+  GI PDR TY  L+  F K G  
Sbjct: 667 QEEGFIPDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNL 726

Query: 71  DSAISWLQQMEQ 82
             A  W   M Q
Sbjct: 727 LEAARWSLWMTQ 738


>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 957

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 141/615 (22%), Positives = 265/615 (43%), Gaps = 93/615 (15%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P   A   +L    R ++++     ++ MRQRG+ P  + Y T+I    K     
Sbjct: 135 DAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHS 194

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+   + +  +++  + VLY+ +I +  K      A+  F  ++++G +PD + YNT+I
Sbjct: 195 DALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTII 254

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              GK   ++E+  L  +M++QG+ P   +Y+ ++N++ +  +F  A    AEM    C 
Sbjct: 255 CALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCI 314

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D      +I++YG+  + ++A+++F  M  +G+     SY ++ +V  EA    EA+ L
Sbjct: 315 ADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKL 374

Query: 252 FRLMQRK--------------------EIEQ--------------NVVTYNTMIKIYGKS 277
           F +M  K                    ++EQ              NVVTY  MI +Y K 
Sbjct: 375 FDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINLYSKF 434

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE------ 331
              E A NL+ EM+  G++P+   Y + + ++  +  +D+A M+ Q+++  G+E      
Sbjct: 435 QMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNER 494

Query: 332 ------------IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITIL 375
                       ID  +   +++     G +  A+ LL +L +      +TA    I + 
Sbjct: 495 EMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLY 554

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            R G  ++A  +F           + V+  MI+L +  K+    I VF++M   G   D+
Sbjct: 555 GRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDA 614

Query: 436 HIIALVLNSYGKLREFETADDL-----------------------------------YSE 460
             +++++++Y K   F+ A  L                                   Y E
Sbjct: 615 VTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGE 674

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGIYERAN 519
           MQE     S + +  ++SL+    D       FE L+S S +   E+ +  +   Y  A 
Sbjct: 675 MQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNS-SEVGADEIAYSQMIHCYGCAG 733

Query: 520 RLNDASRIMNRMNKR 534
           R  +A+ +   M  +
Sbjct: 734 RPKEAADLFQEMETK 748



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/571 (22%), Positives = 253/571 (44%), Gaps = 64/571 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS F Y +++    +A ++  A     EM++ G   D   Y ++I  +GK G+++ A   
Sbjct: 280 PSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKI 339

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV--------------- 121
            ++M+   +      Y+++ ++  +   +++A+ +F  +   G++               
Sbjct: 340 FKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVR 399

Query: 122 -------------------PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
                               ++V Y  MIN++ K ++ ++A  L+ EMRE GVKPD   Y
Sbjct: 400 IGDVEQATKVYNDMVEAGSANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIY 459

Query: 163 STLLNLYVENHKFVEALSVFAEMNE------------------VNCPLDLTTCNIMIDVY 204
            + + LY  +    +A  V  EM +                  +  P+D    N ++   
Sbjct: 460 GSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKR 519

Query: 205 GQLDMAKDADRLFWSMRKMG---IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
            +    ++A+ L   + + G   +D + V    ++ +YG   LF +A  LF  +Q+K+  
Sbjct: 520 AEAGELREAELLLDKLVEAGGCIVDTAAV---LMINLYGRRGLFQKAKSLFNSLQKKDHP 576

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++  YNTMIK+     E E+A  +   M+  G   +A+T S ++  + K G+   AA L
Sbjct: 577 PSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGL 636

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----AR 377
            ++ +  GV +D V Y T + A  + G +  A  +  E+++ +  P     TIL    ++
Sbjct: 637 MKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSK 696

Query: 378 AGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            G +  A   F +  ++ EV  D   +  MI  +    +     ++F++M + G+ P+  
Sbjct: 697 LGDLGRAVQAF-EVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEV 755

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           I   +L+++ +   F  A  L S+M+ +GC  S   +  ++S YG++      ESL   +
Sbjct: 756 IYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLM 815

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRI 527
                      ++ V   Y    +L+DA RI
Sbjct: 816 QDRGLYPDCRHYNEVIRAYGNVGKLSDACRI 846



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/533 (22%), Positives = 241/533 (45%), Gaps = 23/533 (4%)

Query: 33  KQWELAHGLFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
           + W  A   F+ M+ Q   +P    Y+TL+  +G+ G    A   L +M    V  D V 
Sbjct: 85  RGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVA 144

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
              ++E   +   Y   +  +  ++  G+VP    Y TMI    KA+   +A +L E++ 
Sbjct: 145 GGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLL 204

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            + ++P+ V Y+ ++++  +  +  +A+  F +M       D    N +I   G+L   +
Sbjct: 205 VEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQ 264

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +++ L+  M+K GI PS  +Y  ++ V+ +A  F  A      MQR     + V Y ++I
Sbjct: 265 ESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSII 324

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
            +YGK+  +E+A  + +EM   G+  +  +Y+++  +  +AG+   A  LF  +   G+ 
Sbjct: 325 NMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLL 384

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVF 388
              + + T++  + R+G V  A ++ +++ +    N +     I + ++   +E+A  + 
Sbjct: 385 TTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINLYSKFQMVEDAENLL 444

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY---------FP------ 433
            +  ++G   D  ++G  ++L+  +        V ++M+  G          FP      
Sbjct: 445 AEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQ 504

Query: 434 ---DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
              D+ I+  +L    +  E   A+ L  ++ E G    D     M++LYG R  F   +
Sbjct: 505 SPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAK 564

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR-RTFNSSLV 542
           SLF  L    +     +++ +  +      L +A  + +RM +  R F++  V
Sbjct: 565 SLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTV 617



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 211/483 (43%), Gaps = 60/483 (12%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           LFD M ++G+   R T++TL+ CF + G  + A      M +   S ++V Y N+I L  
Sbjct: 374 LFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG-SANVVTYGNMINLYS 432

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP--- 157
           K      A ++ + ++ SG+ PD   Y + + ++  + +  +A ++++EM++ G++    
Sbjct: 433 KFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCN 492

Query: 158 ---------------DTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMI 201
                          DT   + LL    E  +  EA  +  ++ E   C +D T   +MI
Sbjct: 493 EREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVD-TAAVLMI 551

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-------- 253
           ++YG+  + + A  LF S++K    PS+  YNT++++    +   EAI +F         
Sbjct: 552 NLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRM 611

Query: 254 ------------------------LMQRKE---IEQNVVTYNTMIKIYGKSLEHEKATNL 286
                                   LM+R +   +  + V YNT +K   KS   + A  +
Sbjct: 612 FDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEV 671

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             EMQ   IEP+A TY+ +I+++ K G L RA   F+ L SS V  D + Y  MI  Y  
Sbjct: 672 YGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGC 731

Query: 347 VGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            G    A  L  E+     +PN +     +   ARAG   EA  +       G       
Sbjct: 732 AGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVT 791

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  ++  +    K A+   +   M+  G +PD      V+ +YG + +   A  ++ E++
Sbjct: 792 YLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELK 851

Query: 463 EEG 465
             G
Sbjct: 852 TVG 854



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 3/350 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LF+ ++++   P  Y Y+T+I         + AI    +ME++    D V  S L+ 
Sbjct: 563 AKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVH 622

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K   +  A  +  R K  G+  D VAYNT +    K+   K A  +  EM+E  ++P
Sbjct: 623 AYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEP 682

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
              +Y+ L++L+ +      A+  F  +N      D    + MI  YG     K+A  LF
Sbjct: 683 SAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLF 742

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   G  P+ V YN LL  +  A LF EA  L   M+RK    + VTY  ++  YG  
Sbjct: 743 QEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSK 802

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            +   A +L+  MQ+RG+ P+   Y+ +I  +G  GKL  A  +F +L++ G+ ++   +
Sbjct: 803 GKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCF 862

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE---TAITILARAGRIEEA 384
           +T++  +   G      ++  +L Q  T+ +     A+ +   AGR  EA
Sbjct: 863 RTLVKIHLDHGQFEQGWQIYKDLSQSFTVDQNLYGIAVELCIGAGRRTEA 912



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 38/351 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS++ YN +++     K+ E A  +FD M + G   D  T S L+  + KEG F  A 
Sbjct: 575 HPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAA 634

Query: 75  SWLQQMEQDRVSGDLVLYSN-----------------------------------LIELA 99
             +++ ++  V+ D V Y+                                    LI L 
Sbjct: 635 GLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLF 694

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
            KL D  +A+  F  L SS +  D +AY+ MI+ +G A   KEA  L +EM  +G KP+ 
Sbjct: 695 SKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNE 754

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V Y+ LL+ +     F EA  + ++M    CP    T  +++  YG      DA+ L   
Sbjct: 755 VIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHL 814

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M+  G+ P    YN ++R YG      +A  +F  ++   I   +  + T++KI+    +
Sbjct: 815 MQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQ 874

Query: 280 HEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
            E+   + +++ Q+  ++ N   Y   + +   AG+   A  L  +L+  G
Sbjct: 875 FEQGWQIYKDLSQSFTVDQN--LYGIAVELCIGAGRRTEADQLKVELKGKG 923



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 57/123 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E   + P+   YN +L    RA  +  A  L  +MR++G  P   TY  L++ +G +G  
Sbjct: 746 ETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKP 805

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S L  M+   +  D   Y+ +I     +   S A  IF  LK+ GI  +L  + T+
Sbjct: 806 ADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTL 865

Query: 131 INV 133
           + +
Sbjct: 866 VKI 868


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 242/514 (47%), Gaps = 23/514 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +Y V++R +   +  + A GL   MR  G+  D  TY TLI         D A+  
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M +  +  ++V+YS+L++   K   +     +F  +   GI PD+V Y  +I+   K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K+A  +++ M  +G++P+ V+Y+ L+N   +     EA+ V  +M+E     D+ T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG-----IDPSVVSYNTLLRVYGEAELFGEAIHL 251
            N +I     L    + D   W + +M      + P+VV++N++++   +     +A  +
Sbjct: 293 YNTLIK---GLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M+      N+VTYN +I    +  +  KA  LM EM + G+EP++ TYS +I  + K
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-- 369
             ++DRA  L   +R  G+E +   Y  ++VA    G++  A+ L +E+   N  P +  
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD--NNFPLDVV 467

Query: 370 ---TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +AG ++ A  + +   D G   D   +  +I +F+++        V ++M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM-LSLYGARKD 485
            ++G+ PD  +   ++  Y    E     +L  EM  +      ++   +  SL  + + 
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEG 587

Query: 486 FNMLESL--FERLDSDSNINK-----KELHHVVA 512
             +L+SL  F    S  NIN      K LH+ ++
Sbjct: 588 KALLQSLPDFSAEISKGNINSPQELMKVLHNAIS 621



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 207/447 (46%), Gaps = 47/447 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P+V  Y+ +L+   ++ +WE    +F EM ++GI PD   Y+ LI    K G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +  M +  +  ++V Y+ LI    K     +AI +  ++   G+ PD+V YNT+I
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 132 NVFGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                     EA  L+EEM   +  VKP+ V++++++    +  +  +A  V A M E  
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C ++L T N++I    ++   + A  L   M  +G++P   +Y+ L              
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSIL-------------- 403

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
                                IK + K  + ++A +L+  M++RGIEP    Y  ++   
Sbjct: 404 ---------------------IKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNT 365
            + G ++RA  LF ++  +   +D V Y TMI    + G +  AK LL     E   P+ 
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I + A++G +E A  V +Q   +G + D++VF  +I+ +S   +   V+E+  +
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561

Query: 426 MRSAGYFPDSHII-----ALVLNSYGK 447
           M +     DS II     +LV ++ GK
Sbjct: 562 MITKNIALDSKIISTLSTSLVASNEGK 588



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 230/501 (45%), Gaps = 52/501 (10%)

Query: 53  DRYTYSTLITCFGKEGMFDSAISWLQQME---QDRVSGDLVLYSNLIE--LARKLSDYSK 107
           D  +Y+T++T   + G  D A + L+ M          + V Y+ L+    A +L+D  +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD--Q 133

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ +   ++S+G+  D+V Y T+I     A    +A  L+ EM E G++P+ V YS+LL 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            Y ++ ++ +   VF EM+E     D+     +ID   ++  AK A  +   M + G++P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+YN L+    +     EAI + + M  K +  +VVTYNT+IK     LE ++A  L+
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 288 QEMQNRG---IEPNAITYSTII----------------AIWGKAG--------------- 313
           +EM  RG   ++PN +T++++I                A+  + G               
Sbjct: 314 EEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 314 ----KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
               K+ +A  L  ++ S G+E D   Y  +I  + ++  V  A+ LL  +R    +P  
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 +  +   G +E A  +F +  D     D+  +  MI    +        E+ + 
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +   G  PD+   ++V+N + K  + E A+ +  +M   G +    V   ++  Y  + +
Sbjct: 492 IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGE 551

Query: 486 FN-MLESLFERLDSDSNINKK 505
            N +LE + E +  +  ++ K
Sbjct: 552 INKVLELIREMITKNIALDSK 572



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 12/303 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE     ++  YN+++  +LR  +   A  L DEM   G+ PD +TYS LI  F K    
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L  M    +  +L  Y  L+    +     +A ++F+ + ++  + D+VAY+TM
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTM 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA   K A+ L++ + ++G+ PD V+YS ++N++ ++     A  V  +M     
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSM--RKMGIDPSVVS-YNTLLRVYGEAELFGE 247
             D+   + +I  Y           L   M  + + +D  ++S  +T L    E +   +
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQ 592

Query: 248 AIHLFRLMQRKEIEQ-NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           ++  F      EI + N+ +   ++K+   ++  +  +N  Q++  R  + N  T++  +
Sbjct: 593 SLPDF----SAEISKGNINSPQELMKVLHNAISFKAPSN--QQLHKRA-KLNLGTFAGSL 645

Query: 307 AIW 309
           A W
Sbjct: 646 ASW 648



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 14/272 (5%)

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ---NRGIEPNAIT 301
            GEA  L   +      ++ V+YNT++    +   H++A  L++ M    +    PNA++
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ ++         D+A  L + +RS+GV  D V Y T+I        V  A  L+ E+ 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   + +    ++GR E+   VF +  + G   D+ ++  +I+   +  K  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               V + M   G  P+     +++N   K    + A  +  +M E+G V  D V +  L
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG-VAPDVVTYNTL 296

Query: 478 SLYGARKDFNMLES--LFERLDSDSNINKKEL 507
            + G      M E+  L E +    NI K  +
Sbjct: 297 -IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNV 327


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 253/566 (44%), Gaps = 40/566 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++ Y P++  +N ++           A      +  +G   D++TY TLI    K G   
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A+  LQ+ME+  V  +LV+YS LI+   K    S A+ + S++   GI+ D V YN++I
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +       ++E   L+ +M  + V PD  +++ L++   +  + +EA  V A M++    
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N +++ Y   +   +A  LF  M K G++P V++YN L+  Y + ++  EA+ L
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357

Query: 252 FRLMQRKEI-----------------------------------EQNVVTYNTMIKIYGK 276
           F+ +  K +                                     +VVTYN +I    K
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                +A  ++  M  +G++PN +TY+ ++  +     ++ A  +F ++  SG+E D + 
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAF 392
           Y  +I  Y +  +V  A  L  E+R  N IP      + I  L   GRI     +  +  
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           D+G+  D+  +  +++ F + + +   I +F ++   G +PD +    ++++  K  + +
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLK 596

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
            A+D    +   GC  + Q +  +++       F     L  +++ +          ++ 
Sbjct: 597 MAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656

Query: 513 GIYERANRLNDASRIMNRMNKRRTFN 538
           G+  + N  + A ++   M  R   N
Sbjct: 657 GVLLQRNETDKAEKLREEMIARGLVN 682



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 209/453 (46%), Gaps = 4/453 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P    ++ +L  ++R   +  A  LF +++ +GI+P   T++ LI C+  +     A S
Sbjct: 52  PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  + +     +LV ++ +I          KA+     L + G + D   Y T+IN   
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    K A  L++EM +  V+P+ V YS L++   ++    +AL + +++ E    LD  
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID    +   ++  +L   M +  +DP   ++N L+    +     EA  +  +M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++  + ++VTYN +++ Y       +A  L   M  RG+EP+ + Y+ +I  + K   +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
           D A +LF++L +  +      Y ++I      G ++H K+LL E+    + P+ +     
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L + GRI EA  V       G   +I  +  M++ +          ++F +M  +G 
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            PD     +++N Y K    + A  L+ EM+ +
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 208/485 (42%), Gaps = 4/485 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+  + +++           A  L   + + G  P+  T++T+I  F   GM   A+ 
Sbjct: 87  SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + Q +       D   Y  LI    K      A+ +   ++ S + P+LV Y+ +I+   
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +A  L  ++ E+G+  D V+Y++L++      ++ E   +  +M   N   D  
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+ID   +     +A  +   M K G  P +V+YN L+  Y   E   EA  LF  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ +E +V+ YN +I  Y K+   ++A  L +E+ N+ + P   +Y+++I     +G++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
                L  ++  S    D V Y  +I A  + G +  A  +L  +     +PN +     
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +        +  A  +F +   +G   DI  +  +I  + + +     I +F++MR    
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD      +++    L       +L  EM + G       +  +L  +   + F+   S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 492 LFERL 496
           LF ++
Sbjct: 567 LFRQI 571



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 133/324 (41%), Gaps = 39/324 (12%)

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +A++ F  M  V  P   +  + ++    ++     A  LF  ++  GI PS+ ++  L+
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK------------------------ 272
             Y        A  L   + +   + N+VT+NT+I                         
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 273 ----IYG-------KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                YG       K+ + + A +L+QEM+   ++PN + YS +I    K G +  A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LAR 377
             ++   G+ +D V Y ++I     VG      +LL ++ + N  P +    I    L +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            GRI EA  V       GE  DI  +  ++E +   +      E+F +M   G  PD   
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 438 IALVLNSYGKLREFETADDLYSEM 461
             ++++ Y K +  + A  L+ E+
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKEL 361



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 4/289 (1%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA   F  M ++   P    ++ LL        +  AI LF  +Q K I  ++ T+  +I
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y        A +L+  +   G +PN +T++TII  +   G + +A    Q L + G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWV 387
            D   Y T+I    + G +  A  LL E+     QPN +     I  L + G + +A  +
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q  + G + D   +  +I+      ++  V ++  KM      PD +   +++++  K
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
                 A  + + M + G       +  ++  Y +R++ +    LF R+
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 232/493 (47%), Gaps = 44/493 (8%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YNVVL    + A  W+    L D MR+ GI  DRYTY+TLI+C  +  ++  A  
Sbjct: 209 PALVTYNVVLHVYSKIAVPWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAK 268

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       D V  ++L+++  K   Y +AI +   ++  G  P +V YN++I+ + 
Sbjct: 269 VFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYV 328

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL----------------------------- 166
           K  L +EA  L EEM  +G++PD ++Y+TL+                             
Sbjct: 329 KDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLC 388

Query: 167 --NLYVENH----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             N  ++ H    KF E + VF E+       D+ T N ++ V+GQ  +  +   +F  M
Sbjct: 389 TYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEM 448

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G  P   +Y +L+  Y    LF +A+ +++ M    I  ++ TYN ++    +    
Sbjct: 449 KKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRW 508

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L  EM+N    P+ ++YS+++  +  A KLD+   L + + +  +E    L +T+
Sbjct: 509 EQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTL 568

Query: 341 IVAYERVGLVAHAKRLLHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++   +V  ++  ++   ELR+       N +     I+I  + G +++   +     ++
Sbjct: 569 VLVNSKVNNLSDTEKAFLELRRRRCSLDINVL--NAMISIYGKNGMVKKVEEILSLMKES 626

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                 + +  ++ ++SR         +  +++S+   PD +    ++ +YG+  + + A
Sbjct: 627 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686

Query: 455 DDLYSEMQEEGCV 467
             L+SEM+  G V
Sbjct: 687 SRLFSEMKCSGLV 699



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 212/420 (50%), Gaps = 5/420 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE-NHKFVEALS 180
           PD  AY  +I+   +A  F++A  +   M   GV P  V+Y+ +L++Y +    + E L+
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M +   PLD  T N +I    +  + K+A ++F  MR  G +P  V+ N+LL VYG
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A  + EAI + + M++     +VVTYN++I  Y K    E+AT L +EM+ +GIEP+ I
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+T+++   +AGK+D A   + ++  +G + +   Y  +I  +   G       +  E+
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           R     P+ +   T + +  + G   E + VF++   +G V +   +  +I  +SR   +
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 473

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              +E++++M  AG  PD      VL++  +   +E A+ L++EM+       +  +  +
Sbjct: 474 DQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSL 533

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           L  Y   K  + ++SL E + ++   +   L   +  +  + N L+D  +    + +RR 
Sbjct: 534 LHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRC 593



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 253/529 (47%), Gaps = 23/529 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDSAIS 75
           P   AY  ++  + RA ++  A  +F  M   G+ P   TY+ ++  + K  + +   ++
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M +D +  D   Y+ LI   R+ + Y +A  +F  ++++G  PD V  N++++V+G
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+ + EA  +++EM + G  P  V+Y++L++ YV++    EA  +  EM       D+ 
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 196 TCNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   ++   D  G++D A      +  M + G  P++ +YN L++++G    F E + +F
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGT---YNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVF 410

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++      +VVT+NT++ ++G++    + + + +EM+  G  P   TY ++I+ + + 
Sbjct: 411 DEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 470

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G  D+A  +++++  +G+  D   Y  ++ A  R G    A++L  E+   ++ P E + 
Sbjct: 471 GLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSY 530

Query: 373 TILARA----------GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           + L  A            + E  +  R     G VK + +    +   S  +K       
Sbjct: 531 SSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEK------A 584

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F ++R      D +++  +++ YGK    +  +++ S M+E     S   +  ++ +Y  
Sbjct: 585 FLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSR 644

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             D    E++   + S      +  ++ +   Y R  ++ +ASR+ + M
Sbjct: 645 LGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEM 693



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 211/439 (48%), Gaps = 4/439 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    PSV  YN ++ + ++    E A  L +EM  +GI PD  TY+TL++   + G  
Sbjct: 309 EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKI 368

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+AI    +M ++    +L  Y+ LI+L      + + + +F  ++S+G VPD+V +NT+
Sbjct: 369 DAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTL 428

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + VFG+  L  E   + +EM++ G  P+  +Y +L++ Y     F +A+ ++  M E   
Sbjct: 429 LAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 488

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D++T N ++    +    + A++LF  M  +   P  +SY++LL  Y  A+   +   
Sbjct: 489 HPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKS 548

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   +  + IE +     T++ +  K            E++ R    +    + +I+I+G
Sbjct: 549 LSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYG 608

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G + +   +   ++ S + +    Y +++  Y R+G     + +L E++    +P+  
Sbjct: 609 KNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRY 668

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    R G+++EA+ +F +   +G V DI  +   ++ +  N  +   I++   M
Sbjct: 669 SYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM 728

Query: 427 RSAGYFPDSHIIALVLNSY 445
            + G  P+      +L  Y
Sbjct: 729 VTHGCKPNERTYNTILQEY 747



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 215/472 (45%), Gaps = 4/472 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + P     N +L    +A++++ A G+  EM Q G  P   TY++LI+ + K+G+ + 
Sbjct: 276 AGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEE 335

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    ++ME   +  D++ Y+ L+    +      AI  ++ +  +G  P+L  YN +I 
Sbjct: 336 ATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIK 395

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           + G    F E  ++ +E+R  G  PD V+++TLL ++ +N    E   VF EM +     
Sbjct: 396 LHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVP 455

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +I  Y +  +   A  ++  M + GI P + +YN +L        + +A  LF
Sbjct: 456 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLF 515

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+  +   + ++Y++++  Y  + + +K  +L +++    IE +     T++ +  K 
Sbjct: 516 AEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKV 575

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPR 368
             L      F +LR     +D  +   MI  Y + G+V   + +L  +++     +T   
Sbjct: 576 NNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATY 635

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + + + +R G  E+   +  +   +    D   +  MI  + R  +      +F +M+ 
Sbjct: 636 NSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKC 695

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           +G  PD     + + SY     FE A DL   M   GC  +++ +  +L  Y
Sbjct: 696 SGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEY 747



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 181/391 (46%), Gaps = 39/391 (9%)

Query: 17  PSVFAYNVVLR-NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN +++ + +R K  E+   +FDE+R  G  PD  T++TL+  FG+ G+      
Sbjct: 385 PNLCTYNALIKLHGVRGKFPEMMI-VFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSG 443

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M++     +   Y +LI    +   + +A+ I+ R+  +GI PD+  YN +++   
Sbjct: 444 VFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALA 503

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--------------------VENHK- 174
           +   +++A  L  EM     +PD +SYS+LL+ Y                    +E+H  
Sbjct: 504 RGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNG 563

Query: 175 FVEAL--------------SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            V+ L                F E+    C LD+   N MI +YG+  M K  + +   M
Sbjct: 564 LVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLM 623

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           ++  I+ S  +YN+L+ +Y       +  ++   ++      +  +YNTMI  YG+  + 
Sbjct: 624 KESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQM 683

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A+ L  EM+  G+ P+ +TY+  +  +      + A  L + + + G + +   Y T+
Sbjct: 684 KEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTI 743

Query: 341 IVAYERVGLVAHAKRLLHELRQ--PNTIPRE 369
           +  Y   G +A  K  +  L +  P    RE
Sbjct: 744 LQEYCSHGRIADGKSFISNLPELHPGISKRE 774



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 141/311 (45%), Gaps = 40/311 (12%)

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK--------- 276
           DP   +Y  L+     A  F +A+ +FR M    +   +VTYN ++ +Y K         
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232

Query: 277 -----------SLE----------------HEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
                       L+                +++A  +  EM+  G EP+ +T ++++ ++
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
           GKA + D A  + +++   G     V Y ++I +Y + GL+  A +L  E+     +P+ 
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDV 352

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   T ++ L RAG+I+ A   + +    G   ++  +  +I+L     K+  ++ VF++
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDE 412

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +RSAG+ PD      +L  +G+         ++ EM++ G V     +  ++S Y     
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 472

Query: 486 FNMLESLFERL 496
           F+    +++R+
Sbjct: 473 FDQAMEIYKRM 483


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 240/565 (42%), Gaps = 86/565 (15%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P   AY  ++    R K     + L  E+++R I    YTY T +      G  D A +
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M       ++V+Y+ LI+   + S +  A+ +   ++  GI PD   YN++I    
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KAK   EAR  + EM E G KPD  +Y   ++ Y+E  +F  A     EM E     +  
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 196 TCNIMIDVY-------------------GQLDMAK----------------DADRLFWSM 220
            C  +I+ Y                   G L  AK                DA+ +F  M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  GI P V SY TL+  + +     +A  +F  M +  +  NV+ YN ++  + +S E 
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           EKA  L+ EM  +G  PNA+TY TII  + K+G L  A  LF +++  G+  D  +Y T+
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 341 IVAYERVGLVAHA--------------------------------------KRLL----H 358
           +    R+  V  A                                       RL+     
Sbjct: 742 VDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFD 801

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           +  +PN +     I  L + G +E A  +F     A  +  +  +  ++  + +  + + 
Sbjct: 802 KFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSE 861

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA------DDLYSE-MQEEGCVFSDQ 471
           +  VF+++ +AG  PD+ + ++++N++  L+E  T       D ++++   ++GC  S  
Sbjct: 862 MFSVFDEVIAAGIEPDNIMYSVIINAF--LKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919

Query: 472 VHFQMLSLYGARKDFNMLESLFERL 496
               +LS +    +  + E + E +
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENM 944



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 204/455 (44%), Gaps = 4/455 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS  +YN+++  + + K+ E A  L  EM   G+  D   YS LI    K    D+A   
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M     S D ++Y   I +  K     KA ++F  + + G+ P   AY ++I  F +
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  ++   L+ E++++ +     +Y T +     +     A ++  EM    C  ++  
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + Q     DA R+   MR+ GI P    YN+L+    +A+   EA      M 
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               + +  TY   I  Y ++ E   A   ++EM   G+ PN +  + +I  + K GK+ 
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A   F+ +   G+  D   Y  ++    + G V  A+ + HE+R     P+     T I
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              ++ G +++A+ +F +   AG   ++ ++  ++  F R+ +     E+ ++M   G+ 
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P++     +++ Y K  +   A  L+ EM+ +G V
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 6/412 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P ++ Y + + +  +    E A  LFD M   G+ P    Y++LI  F +E         
Sbjct: 350 PMMYDYFICVMS--KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYEL 407

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++++  +      Y   ++      D   A +I   + +SG  P++V Y T+I  F +
Sbjct: 408 LVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQ 467

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F +A  +++EMREQG+ PDT  Y++L+    +  K  EA S   EM E     D  T
Sbjct: 468 KSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFT 527

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
               I  Y +      AD+    M + G+ P+ V    L+  Y +     EA   FR M 
Sbjct: 528 YGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMV 587

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + I  +  TY  ++    K+ +   A  +  EM+ +GI P+  +Y T+I  + K G + 
Sbjct: 588 EQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQ 647

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A+ +F ++  +G+  + ++Y  ++  + R G +  AK LL E+      PN +   T I
Sbjct: 648 KASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
               ++G + EA  +F +    G V D  V+  +++   R       I +FE
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 205/463 (44%), Gaps = 14/463 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P  F YN ++  + +AK+ + A     EM + G  PD +TY   I+ + + G F 
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA  ++++M +  V  + VL + LI    K     +A S F  +   GI+ D   Y  ++
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   K     +A  +  EMR +G+ PD  SY TL++ + +     +A S+F EM +    
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLT 662

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   N+++  + +    + A  L   M   G  P+ V+Y T++  Y ++    EA  L
Sbjct: 663 SNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQL 722

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+ K +  +   Y T++    +  + E+A  +  E   +G   ++  ++ +I    K
Sbjct: 723 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFK 781

Query: 312 AGKLDRAAMLFQKLRSSGVE----IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            GK +    +  +L     +     + V Y  MI    + G +  AK L H +++ N +P
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841

Query: 368 RETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
                T L     + GR  E   VF +   AG   D  ++  +I  F +       + + 
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901

Query: 424 EKMRSAGYFPDSHIIAL-----VLNSYGKLREFETADDLYSEM 461
           ++M +     D   +++     +L+ + K+ E E A+ +   M
Sbjct: 902 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENM 944



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 208/500 (41%), Gaps = 54/500 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+   N +L  +L+  + +L   ++  M +R +  D  +Y  LI    ++G    A   
Sbjct: 187 PSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV 246

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L + E+              EL     +  +A+ +   +   G+VP   +YN +I+   K
Sbjct: 247 LLKTEE--------------ELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCK 292

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  ++A+ L+ EM   G+  D V+YS L++  ++      A  +  EM      +D   
Sbjct: 293 QKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMM 352

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +  I V  +    + A  LF  M   G+ P   +Y +L+  +   +   +   L   ++
Sbjct: 353 YDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ I  +  TY T +K    S + + A N+++EM   G  PN + Y+T+I  + +  +  
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIV---------------------------------- 342
            A  + +++R  G+  D   Y ++I+                                  
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI 532

Query: 343 -AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEV 397
             Y   G  A A + + E+ +   IP +   T L     + G++ EA   FR   + G +
Sbjct: 533 SGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIL 592

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D   +  ++    +N K  +  E+F +MR  G  PD      +++ + KL   + A  +
Sbjct: 593 GDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSI 652

Query: 458 YSEMQEEGCVFSDQVHFQML 477
           + EM + G + S+ + + ML
Sbjct: 653 FDEMVQAG-LTSNVIIYNML 671



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/256 (19%), Positives = 115/256 (44%), Gaps = 43/256 (16%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI------------- 61
           + P+   Y  ++    ++     A  LFDEM+ +G+ PD + Y+TL+             
Sbjct: 696 FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 755

Query: 62  --------TCFGKEGMFDSAISWLQQMEQDRVSGDL-----------------VLYSNLI 96
                    C      F++ I+W+ +  +  ++ D+                 V Y+ +I
Sbjct: 756 TIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMI 815

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +   K  +   A  +F  ++ + ++P ++ Y +++N + K     E   + +E+   G++
Sbjct: 816 DYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIE 875

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEM---NEVN--CPLDLTTCNIMIDVYGQLDMAK 211
           PD + YS ++N +++     +AL +  +M   N V+  C L ++TC  ++  + ++   +
Sbjct: 876 PDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 935

Query: 212 DADRLFWSMRKMGIDP 227
            A+++  +M ++   P
Sbjct: 936 VAEKVVENMVRLKYIP 951


>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
 gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
          Length = 810

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 238/464 (51%), Gaps = 19/464 (4%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++    +A + + A  +F EM + G+A D  T++T+I   G  G+   A S L +ME
Sbjct: 135 YNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKME 194

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + R+S D   Y+  + L     + + A+  + ++++ G+VPD+V++ T++++     + +
Sbjct: 195 ERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMVR 254

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN--- 198
           E   +IEEM++   K D  S   ++ +Y+      E L   A      C  D+   +   
Sbjct: 255 EVEAVIEEMKKSSQKIDVHSVPGIIKMYIN-----EGLHDRANNLLDKCQFDVGFSSKVR 309

Query: 199 -IMIDVYGQLDMAKDADRLFWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             +ID Y +  +  +A+ +F+  R + G +  V+ YN +++ YG+A+L+ +A  LF+ M+
Sbjct: 310 AAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSLFKGMR 369

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + VTYN++I+++      ++A +L+ EMQ  G +P  +T+S ++A + + G+L 
Sbjct: 370 NHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLS 429

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLLHELRQP-NTIPRETAI 372
            A  ++Q++  +GV+ + V+Y ++I  +  VG V  A    R++ E   P N I   + I
Sbjct: 430 DAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLI 489

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            + ++ G  + A  ++++  D     DI     MI L++     +    VF+ +R  G  
Sbjct: 490 KVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMISLYADLGMISEAELVFKNLRENGQ- 548

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG----CVFSDQV 472
            D    A ++  Y  +   + A D+  EM++ G    CV  ++V
Sbjct: 549 ADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKV 592



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 211/452 (46%), Gaps = 9/452 (1%)

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ +++   K   Y KA S+F  +++ G  PD V YN++I +F    L  +AR L++EM+
Sbjct: 345 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ 404

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           E G KP  +++S ++  Y    +  +A+ V+ EM +     +      +I+ + ++   +
Sbjct: 405 EAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVE 464

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A + F  M + GI  + +   +L++VY +   F  A HL++ M+  E   +++  N+MI
Sbjct: 465 EALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMI 524

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
            +Y       +A  + + ++  G + + ++++T++ ++   G LD A  + ++++ SG+ 
Sbjct: 525 SLYADLGMISEAELVFKNLRENG-QADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLL 583

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWV 387
            D V Y  ++  Y   G +     LLHE+     +P     +   T+L + G   E    
Sbjct: 584 RDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFTVLKKGGFPSEGIAQ 643

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
              A+  G  K  +    +  +FS    +A  +E  E    A    DS    + + +YG 
Sbjct: 644 LESAYLEG--KPYARQAVITSIFSVVGLHALALESCESFTKAEVALDSFAYNVAIYAYGS 701

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
             E + A   + + Q+EG          ++  YG       ++ ++ +L          L
Sbjct: 702 SGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKPNDSL 761

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
              V   Y+ ANR +D + ++N+ + R  F+S
Sbjct: 762 VKAVVDAYKNANR-HDLAELVNQ-DIRFGFDS 791



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 209/476 (43%), Gaps = 57/476 (11%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL---ARK 101
           MR RG+ PD  T +T++      G FD A  + +     RV  D +   ++++    +R 
Sbjct: 35  MRLRGLFPDEVTMNTVVKVLKDVGEFDKAERFYKDWCAGRVELDGLELDSMLDSENGSRS 94

Query: 102 LSDYSKAISIFSRLKSSGIV--------------PDLVA-YNTMINVFGKAKLFKEARLL 146
                K   +    K+ G V              P L + YNT+I+++GKA   K+A  +
Sbjct: 95  EPVSFKHFLLTELFKTGGRVKIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEV 154

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
             EM + GV  DT++++T++     +    EA S+  +M E     D  T NI + +Y  
Sbjct: 155 FSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYAD 214

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
                 A   +W +R +G+ P +VS+ T+L +     +  E   +   M++   + +V +
Sbjct: 215 AGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVHS 274

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQ------------------NRGI------------- 295
              +IK+Y     H++A NL+ + Q                   RG+             
Sbjct: 275 VPGIIKMYINEGLHDRANNLLDKCQFDVGFSSKVRAAIIDAYAERGLWAEAEAVFYGKRD 334

Query: 296 ----EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
               E   + Y+ ++  +GKA   D+A  LF+ +R+ G   D V Y ++I  +    L+ 
Sbjct: 335 LLGPEKGVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMD 394

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A+ LL E+++    P  +     +   AR G++ +A  V+++   AG   +  V+G +I
Sbjct: 395 QARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLI 454

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             F+        ++ F  M  +G   +  ++  ++  Y KL  F+ A  LY +M++
Sbjct: 455 NGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKD 510



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 169/371 (45%), Gaps = 9/371 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA + P    ++ V+    R  Q   A  ++ EM + G+ P+   Y +LI  F + G  
Sbjct: 404 QEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNV 463

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+ + + ME+  +  + ++ ++LI++  KL  +  A  ++ ++K     PD++A N+M
Sbjct: 464 EEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSM 523

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+++    +  EA L+ + +RE G + D VS++T++ LY       EA+ +  EM +   
Sbjct: 524 ISLYADLGMISEAELVFKNLRENG-QADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGL 582

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  + N ++  Y      ++   L   M    + P   ++  L  V  +     E I 
Sbjct: 583 LRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFTVLKKGGFPSEGIA 642

Query: 251 LFR---LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
                 L  +    Q V+T  ++  + G    H  A    +      +  ++  Y+  I 
Sbjct: 643 QLESAYLEGKPYARQAVIT--SIFSVVGL---HALALESCESFTKAEVALDSFAYNVAIY 697

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +G +G++D+A   F K +  G+E D V    ++  Y + G+V   KR+  +L+     P
Sbjct: 698 AYGSSGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKP 757

Query: 368 RETAITILARA 378
            ++ +  +  A
Sbjct: 758 NDSLVKAVVDA 768



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 182/426 (42%), Gaps = 24/426 (5%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M + G+ P   TY  L+  + K G+ + A+ W++ M    +  D V  + ++++ + + +
Sbjct: 1   MAKNGVLPTNNTYGMLVDVYAKAGLVE-ALLWIKHMRLRGLFPDEVTMNTVVKVLKDVGE 59

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + KA   +    +  +  D +  ++M++                   E G + + VS+  
Sbjct: 60  FDKAERFYKDWCAGRVELDGLELDSMLD------------------SENGSRSEPVSFKH 101

Query: 165 -LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            LL    +    V+      E   V  P   +T N +ID+YG+    KDA  +F  M K 
Sbjct: 102 FLLTELFKTGGRVKIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKS 161

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G+    +++NT++   G   L  EA  L   M+ + I  +  TYN  + +Y  +     A
Sbjct: 162 GVAMDTITFNTMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAA 221

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                +++N G+ P+ +++ TI+ I      +     + ++++ S  +ID      +I  
Sbjct: 222 LECYWKIRNVGLVPDIVSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVHSVPGIIKM 281

Query: 344 YERVGLVAHAKRLLHELRQP---NTIPRETAITILARAGRIEEATWVFRQAFD-AGEVKD 399
           Y   GL   A  LL + +     ++  R   I   A  G   EA  VF    D  G  K 
Sbjct: 282 YINEGLHDRANNLLDKCQFDVGFSSKVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKG 341

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  M++ + + K Y     +F+ MR+ G +PD      ++  +      + A DL  
Sbjct: 342 VLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLD 401

Query: 460 EMQEEG 465
           EMQE G
Sbjct: 402 EMQEAG 407


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 16/462 (3%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           + ++ ++ R  + + A  +FD     G   + + YS+LI  +G+ G    A+   + M+ 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                +LV+Y+ +I+   K  DY  A+ IF  +   G+ PD + +NT+I+  G+A  ++E
Sbjct: 184 -VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMI 201
              +  EM E+G+  D V+Y+TL+  Y    +     ++   M + +     + T + MI
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D Y +L +A +A  LF  MR   ++P  + YNT++ ++     F EA  + R M+     
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 362

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           +++VTYN ++  YGK  +  +A +L++EM+ RG  PN +TYS +I  + K G    A  L
Sbjct: 363 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 422

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
           FQ ++ +G++ D VLY T++    + G    A  LL E+     +PN I   + +    R
Sbjct: 423 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482

Query: 378 AGRIEEATWVFRQAFDAGEVKDI---SVFGCMIELFSRNKKYANVI---EVFEKMRSAGY 431
              +   T+   + F    V  +   S+      L    +K A V+    VF +M   G 
Sbjct: 483 QCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGV 542

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            P+    + +LN+       E A +L   M+    VF  +V+
Sbjct: 543 KPNVVTFSSILNACSHCASVEDASNLLEAMR----VFDGRVY 580



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 210/401 (52%), Gaps = 19/401 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN V+    +   +  A  +F EM ++G++PDR T++TLI+  G+   ++     
Sbjct: 187 PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRI 246

Query: 77  LQQMEQDRVSGDLVLYSNLIEL-ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             +ME+  ++ D V Y+ LI    R    +  A  + +  KSSGI P ++ Y+TMI+ + 
Sbjct: 247 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYA 306

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  EA  L +EMR Q V+PD + Y+T+++++     F EA S+   M E     D+ 
Sbjct: 307 KLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIV 366

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D YG+    ++A  L   M++ G  P++++Y+ L+  Y +     +A+ LF+ +
Sbjct: 367 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 426

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  ++ +VV Y+T++    K+   ++A  L++EM + GI PN ITY++++  +G+   +
Sbjct: 427 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLM 486

Query: 316 DRAAMLFQKLR-----SSGVEIDPVL---YQTMIVAYERVGLVAHAKRLLHELR----QP 363
            R    F KLR        + + P +    Q+++   ++  LV  A R+  E+     +P
Sbjct: 487 VRKT--FPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKP 544

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           N +   + +   +    +E+A+       +A  V D  V+G
Sbjct: 545 NVVTFSSILNACSHCASVEDAS----NLLEAMRVFDGRVYG 581



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 197/422 (46%), Gaps = 50/422 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP    +N ++    RA +WE    +F EM +RGIA D  TY+TLI  + + G   
Sbjct: 217 EQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMH 276

Query: 72  SAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              + ++ M +   +   ++ YS +I+   KL    +AI++F  +++  + PD + YNTM
Sbjct: 277 LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTM 336

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +++  +   F EA  +   M E G   D V+Y+ LL+ Y +  KF EA+S+  EM +   
Sbjct: 337 VDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 396

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T + +ID Y +    +DA  LF  ++K G+ P VV Y+TL+    +     EA+ 
Sbjct: 397 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 456

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGK--------------------------SLEHEK-- 282
           L   M    I  NV+TYN+++  YG+                          S++ ++  
Sbjct: 457 LLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQS 516

Query: 283 -------------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
                        A  + +EM   G++PN +T+S+I+        ++ A+ L + +R   
Sbjct: 517 LVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFD 576

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +  V +  +++ + R+ +   A+ L +EL    T+   TA+        + +  W F 
Sbjct: 577 GRVYGVTH-GLLMGF-RIRVWRDAETLFNEL---TTLGHNTAVAFY---NALTDVLWHFE 628

Query: 390 QA 391
           QA
Sbjct: 629 QA 630



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 210/437 (48%), Gaps = 24/437 (5%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS---W--LQQ 79
            +++++++    L   L D++    + PD   +  ++   G  G ++  +    W  LQQ
Sbjct: 56  AVKHMIKSPSPSLMPALLDQVSAHLLGPDDLPF--IVRELGHSGQWEKVVKSFDWMVLQQ 113

Query: 80  ---MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
               + D+V+  ++  S+L  L R  SD+++ I  F R   +G   ++  Y+++I  +G+
Sbjct: 114 NLRSQWDKVTSTII--SSLGRLGR--SDWAQLI--FDRAVGAGFGNNVFVYSSLICAYGR 167

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A  + E M+    KP+ V Y+ +++   +   +  AL +F EM E     D  T
Sbjct: 168 SGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRIT 226

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I   G+ +  ++ DR+F  M + GI    V+YNTL+  Y           L   M 
Sbjct: 227 FNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMA 286

Query: 257 RKE-IEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +   IE +V+TY+TMI  Y K  L HE A  L QEM+N+ +EP+ I Y+T++ I  + G 
Sbjct: 287 KSSGIEPSVITYSTMIDGYAKLGLAHE-AIALFQEMRNQNVEPDGICYNTMVDIHARLGN 345

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
            D A  + + +  +G   D V Y  ++ +Y + G    A  LL E++Q    PN +    
Sbjct: 346 FDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSA 405

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I    + G   +A  +F+    AG   D+ ++  +++   +N      + + E+M   G
Sbjct: 406 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465

Query: 431 YFPDSHIIALVLNSYGK 447
             P+      +L++YG+
Sbjct: 466 IRPNVITYNSLLDAYGR 482



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 11/372 (2%)

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+I+  G+      A+L+ +     G   +   YS+L+  Y  + K  +A+ +F  M +
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 182

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           V C  +L   N +ID   +      A R+F  M + G+ P  +++NTL+   G A  + E
Sbjct: 183 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTII 306
              +F  M+ + I ++ VTYNT+I  Y +  +      LM+ M ++ GIEP+ ITYST+I
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP--- 363
             + K G    A  LFQ++R+  VE D + Y TM+  + R+G    A  +   + +    
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 362

Query: 364 -NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            + +     +    + G+  EA  +  +    G   +I  +  +I+ + ++  + + + +
Sbjct: 363 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 422

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG- 481
           F+ ++ AG  PD  + + +++   K    + A  L  EM + G   +   +  +L  YG 
Sbjct: 423 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482

Query: 482 ----ARKDFNML 489
                RK F  L
Sbjct: 483 QCLMVRKTFPKL 494



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 152/296 (51%), Gaps = 6/296 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
             A+++ + + +   PSV  Y+ ++    +      A  LF EMR + + PD   Y+T++
Sbjct: 278 GAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMV 337

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G FD A S  + ME+   + D+V Y+ L++   K   + +A+S+   +K  G  
Sbjct: 338 DIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGAS 397

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y+ +I+ + K    ++A  L +++++ G++PD V YSTL++   +N    EAL++
Sbjct: 398 PNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL 457

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYG-QLDMAKDAD---RLFWSMR-KMGIDPSVV-SYNTL 235
             EM +     ++ T N ++D YG Q  M +      R F   R  M + PS+     +L
Sbjct: 458 LEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSL 517

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           +    +  L   A  +FR M +  ++ NVVT+++++         E A+NL++ M+
Sbjct: 518 VDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMR 573



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 31/299 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I   G+L  +  A  +F      G   +V  Y++L+  YG +    +A+ +F  M +
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 182

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              + N+V YN +I    K  ++  A  + +EM  +G+ P+ IT++T+I+  G+A + + 
Sbjct: 183 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
              +F ++   G+  D V Y T+I  Y R G +     L+           ET    +A+
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM-----------ET----MAK 287

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           +  IE +               +  +  MI+ +++       I +F++MR+    PD   
Sbjct: 288 SSGIEPS---------------VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              +++ + +L  F+ A  +   M+E G       +  +L  YG +  F    SL E +
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEM 391



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 117/274 (42%), Gaps = 10/274 (3%)

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           +T+I   G+    + A  +       G   N   YS++I  +G++GKL +A  +F+ ++ 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK- 182

Query: 328 SGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
             V   P  V+Y  +I A  + G    A R+  E+ +    P+ I   T I+   RA R 
Sbjct: 183 --VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRW 240

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM-RSAGYFPDSHIIAL 440
           EE   +F +  + G  +D   +  +I  + R  +      + E M +S+G  P     + 
Sbjct: 241 EECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYST 300

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           +++ Y KL     A  L+ EM+ +        +  M+ ++    +F+   S+   ++   
Sbjct: 301 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 360

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                  ++ +   Y +  +  +A  ++  M +R
Sbjct: 361 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 394


>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
 gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
          Length = 822

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 256/572 (44%), Gaps = 78/572 (13%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V +  W+  +  Y      YN+++R   R    + A GLF EM++    PD  TY  LI 
Sbjct: 127 VNVFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALIN 186

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             G+ G +  A++ +  M +  ++     Y+NLI       ++ +A+ +  ++  +G+ P
Sbjct: 187 AHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGP 246

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           DLV +N +++ +   + + +A    E M+   V+PDT +++ ++    +  +  +AL VF
Sbjct: 247 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVF 306

Query: 183 AEMNE--VNCPLDLTT----------------C-------------------NIMIDVYG 205
             M +    C  D+ T                C                   N ++  Y 
Sbjct: 307 NSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYA 366

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
              M+++A  +F  +++ GI P VVSY +LL  YG +   G+A  +F +M+++  + NVV
Sbjct: 367 VHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK-------------- 311
           TYN +I  YG +    +A  + ++M+  G +PN ++  T++A   +              
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAA 486

Query: 312 ---------------------AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
                                A +L++A  L+Q +R   V+ D V +  +I    R+   
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKY 546

Query: 351 AHAKRLLHELRQPNTIP--RETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
             A   L E+ +  +IP  +E   ++L   ++ G++ EA  +F Q   AG   D+  +  
Sbjct: 547 PEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTS 605

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           M+  ++ ++K+    E+F +M + G  PDS   + ++ ++ K  +      L   M+E+ 
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             F+  V F++ S     +++     L + +D
Sbjct: 666 VPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/505 (21%), Positives = 233/505 (46%), Gaps = 16/505 (3%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           ++ A   P V  +  ++       + E    +F+ M   G+ P+  +Y+ L+  +   GM
Sbjct: 311 DKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGM 370

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            ++A+S    ++++ +  D+V Y++L+    +     KA  +F  ++     P++V YN 
Sbjct: 371 SENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+ +G      EA  +  +M + G KP+ VS  TLL     + K V   +V +      
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRG 490

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             L+    N  I  Y      + A  L+ +MRK  +    V++  L+        + EAI
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAI 550

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
              + M+   I      Y++++  Y K  +  +A ++  +M+  G +P+ I Y++++  +
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAY 610

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
             + K  +A  LF ++ ++G+E D +    ++ A+ + G  ++   L+  +R+   +P  
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE-KEVPFT 669

Query: 370 TAI--TILARAGRIEEATWVFRQAFDAGEVKD-------ISVFGCMIELFSRNKKYANVI 420
            A+   I +    ++E    +++A D  ++ D       I +   M+ LF ++ K   ++
Sbjct: 670 GAVFFEIFSACNTLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMM 725

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           ++F K+ ++G   +    A++L     +  +    ++   M + G   S+Q++  ++S +
Sbjct: 726 KLFYKIIASGVEINFKTYAILLEHLLAVGNWRKYIEVLEWMSDAGIQPSNQMYRDIIS-F 784

Query: 481 GARKDFNMLESLF-ERLDSDSNINK 504
           G R      E L  ++L+S  NI +
Sbjct: 785 GERSAGIEFEPLIRQKLNSLRNIGE 809


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 206/406 (50%), Gaps = 7/406 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+PSV AYN VL   L       A   FD M   G+AP+ YTY+ L+      G    A+
Sbjct: 119 YAPSVLAYNAVLL-ALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L+ M       + V Y+ L+    +  +  +A  +   ++  G+ P+LV +N+++N  
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA   ++AR + +EM ++G+ PD VSY+TL+  Y +     EALSVFAEM       D+
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +I V  +    + A  L   MR+ G+  + +++  L+  + +     +A+   R 
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++  I+ +VV YN +I  Y      ++A  L++EM+ +G++P+ +TYSTI++ + K G 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA--KRLLHELRQPNTIPRE 369
              A  L Q++  +GV  D + Y ++I      +R+G  AH   K ++    QP+ +   
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG-DAHVLFKNMISLGLQPDEVTYT 476

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + I    + G +E A  +  +   AG + D+  +  +I   S++ +
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 191/373 (51%), Gaps = 4/373 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ YN+++R +      + A  +  +MR  G  P+  TY+TL+  F + G  D A  
Sbjct: 154 APNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAER 213

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M +  +  +LV +++++    K      A  +F  +   G+ PD V+YNT++  + 
Sbjct: 214 LVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EA  +  EM  +G+ PD V++++L+++  +      A+ +  EM E    ++  
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +ID + +     DA      MR+  I PSVV YN L+  Y       EA  L R M
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K ++ +VVTY+T++  Y K+ +   A  L Q+M   G+ P+AITYS++I +  +  +L
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             A +LF+ + S G++ D V Y ++I  + + G V  A  L  E+ +    P+ +     
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513

Query: 372 ITILARAGRIEEA 384
           I  L+++ R +EA
Sbjct: 514 INGLSKSARTKEA 526



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 206/442 (46%), Gaps = 19/442 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+   YN ++    RA + + A  L D MR+ G+ P+  T+++++    K G  + 
Sbjct: 186 AGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMED 245

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A     +M ++ ++ D V Y+ L+    K+    +A+S+F+ +   GI+PD+V + ++I+
Sbjct: 246 ARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIH 305

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           V  KA   + A  L+ EMRE+G++ + ++++ L++ + +     +AL    EM +     
Sbjct: 306 VMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP 365

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            +   N +I+ Y  +    +A  L   M   G+ P VV+Y+T+L  Y +      A  L 
Sbjct: 366 SVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN 425

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M    +  + +TY+++I++  +      A  L + M + G++P+ +TY+++I    K 
Sbjct: 426 QQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKE 485

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G ++RA  L  ++  +GV  D V Y  +I    +      A+RLL +L     +P     
Sbjct: 486 GNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKY 545

Query: 373 TILARA-------------------GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
             L R                    G + EA  V++   D     D SV+  +I    R 
Sbjct: 546 DALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCRE 605

Query: 414 KKYANVIEVFEKMRSAGYFPDS 435
                 +   ++M   G+ P+S
Sbjct: 606 GNVMKALSFHKQMLQCGFAPNS 627



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 181/398 (45%), Gaps = 41/398 (10%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P ++AYN ++     A L   AR   + M   GV P+  +Y+ L+          EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMA------------------------- 210
           LSV  +M    C  +  T N ++  +   G++D A                         
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 211 -------KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
                  +DA ++F  M K G+ P  VSYNTL+  Y +     EA+ +F  M RK I  +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVT+ ++I +  K+   E+A  L++EM+ RG++ N IT++ +I  + K G LD A +  +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAG 379
           ++R   ++   V Y  +I  Y  VG +  A+ L+ E+     +P+ +   T ++   + G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
               A  + +Q  + G + D   +  +I +    K+  +   +F+ M S G  PD     
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            +++ + K    E A  L+ EM + G V  D V + +L
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAG-VLPDVVTYSVL 513



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 6/278 (2%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A R F SM   G+ P+V +YN L+R         EA+ + R M+    + N VTYNT++ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + ++ E ++A  L+  M+  G++PN +T+++++    KAG+++ A  +F ++   G+  
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D V Y T++  Y +VG    A  +  E+ +    P+ +   + I ++ +AG +E A  + 
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           R+  + G   +   F  +I+ F +     + +    +MR     P       ++N Y  +
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
              + A +L  EM+ +G V  D V +  +LS Y    D
Sbjct: 381 GRMDEARELVREMEAKG-VKPDVVTYSTILSAYCKNGD 417



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 95/259 (36%), Gaps = 85/259 (32%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R  PSV  YN ++       + + A  L  EM  +G+ PD  TYST+++ + K G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIEL---ARKLSD------------------------ 104
           SA    QQM ++ V  D + YS+LI +    ++L D                        
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 105 --------YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGV 155
                     +A+S+   +  +G++PD+V Y+ +IN   K+   KEA RLL +   E+ V
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPV 539

Query: 156 KP-------------------------------------------------DTVSYSTLL 166
                                                              D   YS L+
Sbjct: 540 PANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599

Query: 167 NLYVENHKFVEALSVFAEM 185
           + +      ++ALS   +M
Sbjct: 600 HGHCREGNVMKALSFHKQM 618


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 218/433 (50%), Gaps = 4/433 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    +N ++  +    +   A  L D M + G  PD  TY++++    + G    A 
Sbjct: 154 YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++ME+  V  D+  YS +I+   +      AIS+F  +++ GI   +V YN+++   
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA  + +  LL+++M  + + P+ ++++ LL+++V+  K  EA  ++ EM       ++
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y   +   +A+ +   M +    P +V++ +L++ Y   +   + + +FR 
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + ++ +  N VTY+ +++ + +S + + A  L QEM + G+ P+ +TY  ++      GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L++A  +F+ L+ S +++  V+Y T+I    + G V  A  L   L     +PN +    
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I+ L + G + EA  + R+  + G   +   +  +I    R+       ++ E+M+S G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573

Query: 431 YFPDSHIIALVLN 443
           +  D+  I +V++
Sbjct: 574 FSADASSIKMVID 586



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 192/378 (50%), Gaps = 1/378 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++V ++D + E     P +  YN ++  + R+    LA  +  +M +R +  D +TYST+
Sbjct: 176 KAVVLVDRMVENG-CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTI 234

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    ++G  D+AIS  ++ME   +   +V Y++L+    K   ++    +   + S  I
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP+++ +N +++VF K    +EA  L +EM  +G+ P+ ++Y+TL++ Y   ++  EA +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M    C  D+ T   +I  Y  +    D  ++F ++ K G+  + V+Y+ L++ + 
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           ++     A  LF+ M    +  +V+TY  ++     + + EKA  + +++Q   ++   +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            Y+TII    K GK++ A  LF  L   GV+ + + Y  MI    + G ++ A  LL ++
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 361 RQPNTIPRETAITILARA 378
            +    P +     L RA
Sbjct: 535 EEDGNAPNDCTYNTLIRA 552



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/537 (21%), Positives = 241/537 (44%), Gaps = 8/537 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWEL----AHGLFDEMRQRGIAPDRYTYS 58
             I  +++   R   S+   NV  R  LR+   ++    A  LF EM +    P    +S
Sbjct: 33  CTISSFLSSCERDFSSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFS 92

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
              +   +   F+  + + +Q+E + ++ ++   + +I    +      A S+  ++   
Sbjct: 93  RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  PD   +NT+IN         +A +L++ M E G +PD V+Y++++N    +     A
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +  +M E N   D+ T + +ID   +      A  LF  M   GI  SVV+YN+L+R 
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +A  + +   L + M  +EI  NV+T+N ++ ++ K  + ++A  L +EM  RGI PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            ITY+T++  +    +L  A  +   +  +    D V + ++I  Y  V  V    ++  
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 359 ELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            + +   +      +IL     ++G+I+ A  +F++    G + D+  +G +++    N 
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           K    +E+FE ++ +       +   ++    K  + E A +L+  +  +G   +   + 
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            M+S    +   +    L  +++ D N      ++ +   + R   L  +++++  M
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y+++++   ++ + +LA  LF EM   G+ PD  TY  L+      G  + A+   + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++ ++   +V+Y+ +IE   K      A ++F  L   G+ P+++ Y  MI+   K    
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA +L+ +M E G  P+  +Y+TL+  ++ +     +  +  EM       D ++  ++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 201 IDVY--GQLD 208
           ID+   G+LD
Sbjct: 585 IDMLLSGELD 594



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 62/131 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++++    +  Y  ++  + +  + E A  LF  +  +G+ P+  TY+ +I+   K+G  
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++ME+D  + +   Y+ LI    +  D + +  +   +KS G   D  +   +
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 131 INVFGKAKLFK 141
           I++    +L K
Sbjct: 585 IDMLLSGELDK 595


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 221/446 (49%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D +  E +  P +   + ++  +    +   A  L D M + G  PD  TY  ++
Sbjct: 159 AVALVDRM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G    A+   ++ME+  +   +V YS +I+   K   +  A+S+F+ ++  GI 
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+V Y+++I        + +   ++ EM  + + PD V++S L++++V+  K +EA  +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM       D  T N +ID + + +   +A+++F  M   G +P +V+Y+ L+  Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   + + LFR +  K +  N +TYNT++  + +S +   A  L QEM +RG+ P+ +T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y  ++      G+L++A  +F+K++ S + +   +Y  +I        V  A  L   L 
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ +     I  L + G + EA  +FR+  + G   D   +  +I          
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
           + +E+ E+M+  G+  DS  I +V++
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVID 603



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 232/495 (46%), Gaps = 8/495 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  P+   +N +   V R KQ++L  G    M   GI  D YT + +I C+ ++    
Sbjct: 63  QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S L +  +     D + +S L+         S+A+++  R+      PDLV  +T+I
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA +LI+ M E G +PD V+Y  +LN   ++     AL +F +M E N  
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +   +I+ID   +     DA  LF  M   GI   VV+Y++L+        + +   +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M  + I  +VVT++ +I ++ K  +  +A  L  EM  RGI P+ ITY+++I  + K
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
              L  A  +F  + S G E D V Y  +I +Y +   V    RL  E+      PNTI 
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +    ++G++  A  +F++    G    +  +G +++    N +    +E+FEKM+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +       I  ++++      + + A  L+  + ++G V  D V + ++ + G  K  +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM-IGGLCKKGS 540

Query: 488 MLES--LFERLDSDS 500
           + E+  LF ++  D 
Sbjct: 541 LSEADMLFRKMKEDG 555



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 214/462 (46%), Gaps = 12/462 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFD---EMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           Y P    ++ ++       +   A  L D   EM+QR   PD  T STLI     +G   
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVS 192

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  + +M +     D V Y  ++    K  + + A+ +F +++   I   +V Y+ +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K   F +A  L  EM  +G+K D V+YS+L+     + K+ +   +  EM   N  
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +IDV+ +     +A  L+  M   GI P  ++YN+L+  + +     EA  +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F LM  K  E ++VTY+ +I  Y K+   +    L +E+ ++G+ PN ITY+T++  + +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--- 368
           +GKL+ A  LFQ++ S GV    V Y  ++      G +  A  +  ++++         
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 369 -ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  +  A ++++A  +F    D G   D+  +  MI    +    +    +F KM+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             G  PD     +++ ++       ++ +L  EM+   C FS
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV--CGFS 592



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 206/456 (45%), Gaps = 4/456 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++   +++    R K+   A  +     + G  PD  T+STL+  F  EG    A++ + 
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M + +   DLV  S LI         S+A+ +  R+   G  PD V Y  ++N   K+ 
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A  L  +M E+ +K   V YS +++   ++  F +ALS+F EM       D+ T +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I          D  ++   M    I P VV+++ L+ V+ +     EA  L+  M  +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  + +TYN++I  + K     +A  +   M ++G EP+ +TYS +I  + KA ++D  
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF+++ S G+  + + Y T+++ + + G +  AK L  E+      P+ +     +  
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   G + +A  +F +   +     I ++  +I       K  +   +F  +   G  PD
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                +++    K      AD L+ +M+E+GC   D
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 204/458 (44%), Gaps = 4/458 (0%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + AI   + M Q R     + ++ L     +   Y   +     ++ +GI  D+     M
Sbjct: 52  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN + + K    A  ++    + G +PDT+++STL+N +    +  EA+++   M E+  
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL T + +I+         +A  L   M + G  P  V+Y  +L    ++     A+ 
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LFR M+ + I+ +VV Y+ +I    K    + A +L  EM+ +GI+ + +TYS++I    
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             GK D  A + +++    +  D V +  +I  + + G +  AK L +E+      P+TI
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I    +   + EA  +F      G   DI  +  +I  + + K+  + + +F ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
            S G  P++     ++  + +  +   A +L+ EM   G   S   +  +L       + 
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           N    +FE++          +++++      A++++DA
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 221/446 (49%), Gaps = 5/446 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D +  E +  P +   + ++  +    +   A  L D M + G  PD  TY  ++
Sbjct: 188 AVALVDRM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 246

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G    A+   ++ME+  +   +V YS +I+   K   +  A+S+F+ ++  GI 
Sbjct: 247 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 306

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+V Y+++I        + +   ++ EM  + + PD V++S L++++V+  K +EA  +
Sbjct: 307 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 366

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM       D  T N +ID + + +   +A+++F  M   G +P +V+Y+ L+  Y +
Sbjct: 367 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 426

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   + + LFR +  K +  N +TYNT++  + +S +   A  L QEM +RG+ P+ +T
Sbjct: 427 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 486

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y  ++      G+L++A  +F+K++ S + +   +Y  +I        V  A  L   L 
Sbjct: 487 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 546

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ +     I  L + G + EA  +FR+  + G   D   +  +I          
Sbjct: 547 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 606

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
           + +E+ E+M+  G+  DS  I +V++
Sbjct: 607 SSVELIEEMKVCGFSADSSTIKMVID 632



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 232/495 (46%), Gaps = 8/495 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  P+   +N +   V R KQ++L  G    M   GI  D YT + +I C+ ++    
Sbjct: 92  QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 151

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S L +  +     D + +S L+         S+A+++  R+      PDLV  +T+I
Sbjct: 152 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 211

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA +LI+ M E G +PD V+Y  +LN   ++     AL +F +M E N  
Sbjct: 212 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 271

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +   +I+ID   +     DA  LF  M   GI   VV+Y++L+        + +   +
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M  + I  +VVT++ +I ++ K  +  +A  L  EM  RGI P+ ITY+++I  + K
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
              L  A  +F  + S G E D V Y  +I +Y +   V    RL  E+      PNTI 
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +    ++G++  A  +F++    G    +  +G +++    N +    +E+FEKM+
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +       I  ++++      + + A  L+  + ++G V  D V + ++ + G  K  +
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM-IGGLCKKGS 569

Query: 488 MLES--LFERLDSDS 500
           + E+  LF ++  D 
Sbjct: 570 LSEADMLFRKMKEDG 584



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 214/462 (46%), Gaps = 12/462 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFD---EMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           Y P    ++ ++       +   A  L D   EM+QR   PD  T STLI     +G   
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVS 221

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  + +M +     D V Y  ++    K  + + A+ +F +++   I   +V Y+ +I
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 281

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K   F +A  L  EM  +G+K D V+YS+L+     + K+ +   +  EM   N  
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +IDV+ +     +A  L+  M   GI P  ++YN+L+  + +     EA  +
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F LM  K  E ++VTY+ +I  Y K+   +    L +E+ ++G+ PN ITY+T++  + +
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--- 368
           +GKL+ A  LFQ++ S GV    V Y  ++      G +  A  +  ++++         
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 369 -ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  +  A ++++A  +F    D G   D+  +  MI    +    +    +F KM+
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             G  PD     +++ ++       ++ +L  EM+   C FS
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV--CGFS 621



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 206/456 (45%), Gaps = 4/456 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++   +++    R K+   A  +     + G  PD  T+STL+  F  EG    A++ + 
Sbjct: 134 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 193

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M + +   DLV  S LI         S+A+ +  R+   G  PD V Y  ++N   K+ 
Sbjct: 194 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 253

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
               A  L  +M E+ +K   V YS +++   ++  F +ALS+F EM       D+ T +
Sbjct: 254 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 313

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I          D  ++   M    I P VV+++ L+ V+ +     EA  L+  M  +
Sbjct: 314 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 373

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  + +TYN++I  + K     +A  +   M ++G EP+ +TYS +I  + KA ++D  
Sbjct: 374 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 433

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF+++ S G+  + + Y T+++ + + G +  AK L  E+      P+ +     +  
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   G + +A  +F +   +     I ++  +I       K  +   +F  +   G  PD
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                +++    K      AD L+ +M+E+GC   D
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 204/458 (44%), Gaps = 4/458 (0%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + AI   + M Q R     + ++ L     +   Y   +     ++ +GI  D+     M
Sbjct: 81  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 140

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN + + K    A  ++    + G +PDT+++STL+N +    +  EA+++   M E+  
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 200

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL T + +I+         +A  L   M + G  P  V+Y  +L    ++     A+ 
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LFR M+ + I+ +VV Y+ +I    K    + A +L  EM+ +GI+ + +TYS++I    
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             GK D  A + +++    +  D V +  +I  + + G +  AK L +E+      P+TI
Sbjct: 321 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 380

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I    +   + EA  +F      G   DI  +  +I  + + K+  + + +F ++
Sbjct: 381 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 440

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
            S G  P++     ++  + +  +   A +L+ EM   G   S   +  +L       + 
Sbjct: 441 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 500

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           N    +FE++          +++++      A++++DA
Sbjct: 501 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 538


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 223/457 (48%), Gaps = 11/457 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+VF YN+++  + +    E A GLF+EM+ RG+ PD  TY+++I  +GK G  D 
Sbjct: 127 AGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDD 186

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            + + ++M+      D++ Y++LI    K     K +  +  +K SG+ P++V+Y+T+++
Sbjct: 187 TVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVD 246

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  + ++A     +MR  G  P+  +Y++L++   +     +A  +  EM EV    
Sbjct: 247 AFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEW 306

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   +ID     +  K+A++LF  M   G+ P++ SYN L+  + +A+    A+ L 
Sbjct: 307 NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELL 366

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++ + I+ +++ Y T I       + E A  +M EMQ  GI+ N + Y+T++  + K+
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR-QPNTIP 367
           G       L ++++    E+  V +  +I    +  LV+ A     R+ ++   QPN   
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAV 486

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF---E 424
               I  L +  +++ AT +F Q    G V D + +     L   N K  N++E     +
Sbjct: 487 YTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAY---TSLMDGNLKQGNMLEALALRD 543

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           KM   G   D      ++  + +  + + A     EM
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 232/482 (48%), Gaps = 38/482 (7%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L    +  + +     F +M   G  P  +TY+ +I C  KEG  ++A
Sbjct: 93  RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAA 152

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M+   +  D V Y+++I+   K+      +  F  +KS    PD++ YN++IN 
Sbjct: 153 RGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINC 212

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K+    +      EM++ G+KP+ VSYSTL++ + +     +A+  + +M  V    +
Sbjct: 213 FCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPN 272

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   ++D   ++    DA RL   M ++G++ +VV+Y  L+    +AE   EA  LF 
Sbjct: 273 EFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFG 332

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    +  N+ +YN +I  + K+   ++A  L+ E++ RGI+P+ + Y T   IWG  G
Sbjct: 333 KMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF--IWGLCG 390

Query: 314 --KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             K++ A ++  +++ +G++ + ++Y T++ AY + G       LL E+++ +       
Sbjct: 391 LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD------- 443

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-G 430
                      E T V               F  +I+   +NK  +  I+ F +M +  G
Sbjct: 444 ----------HEVTVV--------------TFCVLIDGLCKNKLVSKAIDYFGRMSNDFG 479

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P++ +   +++   K  + + A  L+ +M +EG V  D+  +  L + G  K  NMLE
Sbjct: 480 LQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLV-PDRTAYTSL-MDGNLKQGNMLE 537

Query: 491 SL 492
           +L
Sbjct: 538 AL 539



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 177/373 (47%), Gaps = 5/373 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y+ ++    +    + A   + +MR+ G  P+ +TY++L+    K G    A   
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  V  ++V Y+ LI+         +A  +F ++ ++G++P+L +YN +I+ F K
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK    A  L+ E++ +G++PD + Y T +       K   A  V  EM E     +   
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLM 255
              ++D Y +     +   L   M+++  + +VV++  L+    + +L  +AI  F R+ 
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               ++ N   Y  MI    K  + + AT L ++M   G+ P+   Y++++    K G +
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET-AITI 374
             A  L  K+   G+++D + Y +++  + +   +  A+  L E+     +P E   I +
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGV 595

Query: 375 LARA---GRIEEA 384
           L +    G I+EA
Sbjct: 596 LKKHYELGCIDEA 608



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y   +  +   ++ E A  + +EM++ GI  +   Y+TL+  + K G     +  
Sbjct: 376 PDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHL 435

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
           L++M++      +V +  LI+   K    SKAI  F R+ +  G+ P+   Y  MI+   
Sbjct: 436 LEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLC 495

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    K A  L E+M ++G+ PD  +Y++L++  ++    +EAL++  +M E+   LDL 
Sbjct: 496 KENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLL 555

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               ++  + Q +  + A      M    I P  V    +L+ + E     EA+ L   +
Sbjct: 556 AYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYL 615

Query: 256 QRKEI 260
            + ++
Sbjct: 616 MKHQL 620


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 216/442 (48%), Gaps = 9/442 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V+ YN ++  + +  + + A  + +EM+  GI+PD YTYS LI  F K+G  +  +  +
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383

Query: 78  QQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           ++M+   +   LV YS+L      ++LSD S  + IF  L ++G   D  AY+ +I  F 
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS--LDIFRDLGAAGYKYDQTAYSILIKGFC 441

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                  A  L+EEM    + PD  ++ +L++ + +   +V AL  F  M E      + 
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIA 501

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TCN++ID + +    ++A  L   M+  GI P++ +YN ++    +      A+ LF LM
Sbjct: 502 TCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM 561

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ +  +VV Y+T+I  + K    +KA  L   M   G+ P+ + Y+ +I I     ++
Sbjct: 562 LKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRM 621

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  LF+K+  +G+  D + Y ++I  + R+G +  A  L +E+ Q   +P     T L
Sbjct: 622 CEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSL 681

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                +  RI+ A  +  +    G   D+  +  +I    R       +E+  +M+  G 
Sbjct: 682 VDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGV 741

Query: 432 FPDSHIIALVLNSYGKLREFET 453
            PD H+  ++L    K ++ +T
Sbjct: 742 LPD-HMTYMMLEWLLKAKKLKT 762



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 219/475 (46%), Gaps = 19/475 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWEL------AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P+VF Y +++    +    E       A  + +EM + G +P   TYST I    + G  
Sbjct: 247 PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYV 306

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +SA+ +++ +       ++  Y+ +I    K  +  +A+ +   +KS GI PD+  Y+ +
Sbjct: 307 ESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL 366

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K    ++   LIEEM+   ++P  VSYS+L +   +      +L +F ++     
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGY 426

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             D T  +I+I  +   G LD    A +L   M +  + P   ++ +L+  + +  L+  
Sbjct: 427 KYDQTAYSILIKGFCMQGDLD---SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVN 483

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+  F +M    I  ++ T N +I  + +    E+A NLM EMQ +GI PN  TY+ +I 
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER-----VGLVAHAKRLLHELRQ 362
              K  K +RA  LF  +    V    V+Y T+I  + +       L+ +A R+L     
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA-RMLKIGVT 602

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +     I IL    R+ EA  +F++  + G   D   +  +I  F R         +
Sbjct: 603 PDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWAL 662

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           F +M   G+ P       +++ Y K+   + AD L  EM+ +G +  D V + +L
Sbjct: 663 FNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG-ITPDVVTYNVL 716



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 8   WINEEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++ EE +YS   PS+ +Y+ +   + + +  +++  +F ++   G   D+  YS LI  F
Sbjct: 381 YLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGF 440

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
             +G  DSA   +++M ++ ++ D   + +L+    K+  +  A+  F+ +   GI+P +
Sbjct: 441 CMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSI 500

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              N +I+   +    +EA  L+ EM+ QG+ P+  +Y+ ++N   +  K   AL +F  
Sbjct: 501 ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M + N    +   + +ID + +   ++ A  L+  M K+G+ P +V+Y  L+ +      
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA +LF+ M    +  + ++Y ++I  + +  +  KA  L  EM  RG  P  +TY++
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++  + K  ++D A ML  +++  G+  D V Y  +I A+ R G +  A  +L+E+++  
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740

Query: 365 TIP 367
            +P
Sbjct: 741 VLP 743



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 165/328 (50%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A Y     AY+++++        + AH L +EM +  +APD   + +L+  F K G++ +
Sbjct: 424 AGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVN 483

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+ +   M +  +   +   + +I+   +     +A+++ + +++ GI P+L  YN +IN
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K +  + A  L   M ++ V P  V YSTL++ + +     +AL ++A M ++    
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+    I+I++        +A  LF  M + G+ P  +SY +++  +       +A  LF
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M ++     VVTY +++  Y K    + A  L+ EM+ +GI P+ +TY+ +IA   + 
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRR 723

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           G LD+A  +  +++ +GV  D + Y  +
Sbjct: 724 GNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/382 (20%), Positives = 163/382 (42%), Gaps = 35/382 (9%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           ++++  LI++    S    A+ +F + K +G+     + N ++    +A   +  R L E
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM+  G  P+  +Y+ ++N Y + +                              +G+ D
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGN------------------------------FGEAD 268

Query: 209 M-AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           +  + A  +   M + G  P+VV+Y+T +           A+   R +       NV  Y
Sbjct: 269 IDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCY 328

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I    K  E ++A  +++EM++ GI P+  TYS +I  + K G +++   L ++++ 
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEE 383
           S +E   V Y ++     +  L   +  +  +L        +TA +IL +     G ++ 
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +  +        D S F  ++  F +   + N +E F  M   G  P      ++++
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508

Query: 444 SYGKLREFETADDLYSEMQEEG 465
           ++ +    E A +L +EMQ +G
Sbjct: 509 AHCREGRVEEALNLMNEMQTQG 530



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/426 (18%), Positives = 169/426 (39%), Gaps = 61/426 (14%)

Query: 82  QDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           + R+    VL   ++++ + L+ + ++ I   + +K  G    + A+ T++NV   A + 
Sbjct: 81  RSRIHRKHVLSPVVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMH 140

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            E   L+          D V Y   +NL        +A  +F  +               
Sbjct: 141 MEVYALLR---------DIVCYYNKVNL--------DAFELFPIL--------------- 168

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
                 L+  KDA R            SV+ ++ L++V+    +   A+ +F   ++  +
Sbjct: 169 ------LESPKDAAR------------SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGL 210

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA--GKLD-- 316
           E +  + N ++K   ++   E   +L +EM++ G  PN  TY+ ++  + K   G+ D  
Sbjct: 211 ELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADID 270

Query: 317 --RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ET 370
             +A  + +++  +G     V Y T I    RVG V  A   +  L   N +        
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNA 330

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + G ++EA  V  +    G   D+  +  +I  F +       + + E+M+ + 
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P     + + +   K R  + + D++ ++   G  +    +  ++  +  + D +   
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450

Query: 491 SLFERL 496
            L E +
Sbjct: 451 KLMEEM 456


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 248/562 (44%), Gaps = 41/562 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP+V AYN V+    +      A  LF EM QRGI PD  TY++++    K    D 
Sbjct: 216 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 275

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A ++L+QM   RV  +   Y+NLI        + +A+ +F  ++   I+PD+V  + ++ 
Sbjct: 276 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 335

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    KEAR + + M  +G  PD  SY+ +LN Y      V+   +F  M       
Sbjct: 336 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N++I  Y    M   A  +F  MR  G+ P VV+Y T++          +A+  F
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR------------------- 293
             M  + +  +   YN +I+ +       KA  L+ E+ N                    
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 515

Query: 294 ----------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G+ P+A+ Y+ ++  +   GK+++A  +F  + S+G+E + V Y
Sbjct: 516 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 575

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++  Y ++G +     L  E+ Q    P+TI     I  L  AGR   A   F +  +
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +G   DI  +  ++    +N+ +   I +F+++R+     +   +  +++   + R  E 
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVA 512
           A DL++ +     V S   +  M++           E +F  + ++    N + L+HVV 
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            + ++ N +  A   ++++++R
Sbjct: 756 ELLKK-NEIVRAGAYLSKIDER 776



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 6/423 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYS 106
           G  PD ++YS L+     +G    A   L+ M +     S ++V Y+ +I+   K  D +
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           KA  +F  +   GI PDLV YN++++   KA+   +A   + +M  + V P+  +Y+ L+
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             Y    ++ EA+ VF EM   +   D+ T ++++    +    K+A  +F +M   G +
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P V SYN +L  Y       +   LF LM    I  +  T+N +IK Y      +KA  +
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 419

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             EM++ G++P+ +TY T+IA   + GK+D A   F ++   GV  D   Y  +I  +  
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 479

Query: 347 VGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            G +  AK L+ E+       + +   + I  L + GR+ +A  +F    + G   D  V
Sbjct: 480 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 539

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +++ +    K    + VF+ M SAG  P+      ++N Y K+   +    L+ EM 
Sbjct: 540 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 599

Query: 463 EEG 465
           + G
Sbjct: 600 QRG 602



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 98/201 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   Y++++  +  A +   A   F EM + GIA D  TY+ ++    K   FD AI  
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    V  +++  + +I+   +     +A  +F+ +  S +VP +V Y+ MI    K
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 724

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +EA  +   M+  G +P++   + ++   ++ ++ V A +  ++++E N  L+  T
Sbjct: 725 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 784

Query: 197 CNIMIDVYGQLDMAKDADRLF 217
             +++D++      ++  R  
Sbjct: 785 AMLLVDLFSSKGTCREQIRFL 805


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 256/538 (47%), Gaps = 8/538 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +LD + E+    PS  +Y  ++  +   K   LA+ L ++M   G+ P+   YS L
Sbjct: 421 RALELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSIL 479

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +  EG  + A   L  M    V+ D+  Y+ +I    K     +A +    ++  G+
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V +   I  + K     EA    +EM + G+ P+   Y+ L+N + +    +EALS
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F  ++ +    D+ TC+  I    +    ++A ++F  +++ G+ P V +Y++L+  + 
Sbjct: 600 IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     +A  L   M  K I  N+  YN ++    KS + ++A  L   M  +G+EP+++
Sbjct: 660 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYST+I  + K+  +  A  LF ++ S GV+    +Y  ++    + G +  A  L  E+
Sbjct: 720 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779

Query: 361 RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            Q     T+   T I    ++ +I+EA+ +F++      + D   +  +I+   +  K  
Sbjct: 780 LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 839

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               +F++M+      D+     ++  Y KL +      L+ +M  +G V  D+V + ++
Sbjct: 840 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG-VKPDEVTYGLV 898

Query: 478 SLYGARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            +Y   K+ N++E+  L + +     + K  +H ++     +   L +AS++++ M +
Sbjct: 899 -IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 216/487 (44%), Gaps = 39/487 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+   N +L+++L+    EL   +++ M    +  D YTY+ L+    K G    A   L
Sbjct: 192 SLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVL 251

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M++  ++ +  +YS +IE   ++ D  +A+ +   +   G+VP+   Y  +     +A
Sbjct: 252 IEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRA 311

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K   EA+L  EEM++ G+KPD  + S L++ ++      E L +   M     P++L T 
Sbjct: 312 KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITY 371

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N++I    +    + A  +   M  +G  P+  ++  L+  Y      G A+ L   M++
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431

Query: 258 KE-----------------------------------IEQNVVTYNTMIKIYGKSLEHEK 282
           +                                    ++ NVV Y+ +I  Y      E+
Sbjct: 432 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE 491

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L+  M   G+ P+   Y+ II+   KAGK++ A+    +++  G++ D V +   I+
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVK 398
            Y + G +  A +   E+     +P     T+L     +AG + EA  +FR+    G + 
Sbjct: 552 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+      I    +N +    ++VF +++  G  PD    + +++ + K  E E A +L+
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671

Query: 459 SEMQEEG 465
            EM  +G
Sbjct: 672 DEMCLKG 678



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 231/513 (45%), Gaps = 75/513 (14%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P +F YN ++  + +A + E A     E++ RG+ PD  T+   I  + K G    A  
Sbjct: 505  APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  +M    +  +  LY+ LI    K  +  +A+SIF RL + G++PD+   +  I+   
Sbjct: 565  YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K    +EA  +  E++E+G+ PD  +YS+L++ + +  +  +A  +  EM       ++ 
Sbjct: 625  KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              N ++D   +    + A +LF  M + G++P  V+Y+T++  Y ++E   EA  LF  M
Sbjct: 685  IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 256  QRKEIEQN----------------------------------VVTYNTMIKIYGKSLEHE 281
              K ++ +                                   +++NT+I  Y KS + +
Sbjct: 745  PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 804

Query: 282  KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            +A+ L QEM  + I P+ +TY+T+I    KAGK++ A +LF++++   + +D V Y +++
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864

Query: 342  VAYERVG---------------------------LVAHAK--------RLLHELRQPNTI 366
              Y ++G                           + AH K        +L  E+     +
Sbjct: 865  YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924

Query: 367  PRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
             + T     IT L +   + EA+ +  +  + G    ++    ++  F    K      V
Sbjct: 925  TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984

Query: 423  FEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            FE ++S G  PD+  +  ++N  G L + ++ D
Sbjct: 985  FEGVKSLGLVPDTTTLIDLVN--GNLNDTDSED 1015



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 224/518 (43%), Gaps = 40/518 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++  YNV++  + +  + E A  +   M   G  P+  T+  LI  + +E     A+  L
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +ME+  +    V Y  +I       D S A  +  ++  SG+ P++V Y+ +I  +   
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EAR L++ M   GV PD   Y+ +++   +  K  EA +   E+       D  T 
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              I  Y +     +A + F  M   G+ P+   Y  L+  + +A    EA+ +FR +  
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD- 316
             +  +V T +  I    K+   ++A  +  E++ +G+ P+  TYS++I+ + K G+++ 
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 666

Query: 317 ----------------------------------RAAMLFQKLRSSGVEIDPVLYQTMIV 342
                                             RA  LF  +   G+E D V Y TMI 
Sbjct: 667 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 726

Query: 343 AYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            Y +   VA A  L HE+     QP++      +    + G +E+A  +FR+    G   
Sbjct: 727 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 786

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +S F  +I+ + ++ K     ++F++M +    PD      V++ + K  + E A+ L+
Sbjct: 787 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 845

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            EMQE   +     +  ++  Y      + + +LFE++
Sbjct: 846 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 200/466 (42%), Gaps = 6/466 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           ++L W       SP VF  ++++ +  R    + A  +F   +   I       ++L+  
Sbjct: 145 SVLFWFRNYGGSSPVVF--DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKD 202

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K GM +        M   ++  D+  Y+ L+    K  D   A  +   +   G+ P+
Sbjct: 203 LLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
              Y+ +I    +     EA  L   M E+G+ P+T +Y+ +        +  EA   F 
Sbjct: 263 EFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 322

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM +     D   C+ +ID + +     +  R+   M   GI  ++++YN L+    +  
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  + + M     + N  T+  +I+ Y +     +A  L+ EM+ R + P+A++Y 
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG 442

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-- 361
            +I        L  A  L +K+  SG++ + V+Y  +I+AY   G +  A+RLL  +   
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502

Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P+       I+ L++AG++EEA+    +    G   D   FG  I  +S+  K    
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + F++M   G  P++ +  +++N + K      A  ++  +   G
Sbjct: 563 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 146/342 (42%), Gaps = 10/342 (2%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAELFGEAIHLFRL 254
           +I+ID Y ++ M  +A  +F+  +   I  S++  N+LL+     G  ELF +   ++  
Sbjct: 162 DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWK---VYNG 218

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M   ++  +V TY  ++    K+ +   A  ++ EM  +G+ PN   YS +I    + G 
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D A  L + +   G+  +   Y  +     R   +  AK    E+++    P   A + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     R G I+E   +       G   ++  +  +I    +  K     E+ + M + G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P+S    L++  Y +      A +L  EM++   V S   +  M++     KD ++  
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
            L E++          ++ ++   Y    R+ +A R+++ M+
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 21/253 (8%)

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE------------ 261
           D  +WS  +MG+   + S++ L      +ELFG A  +   M R                
Sbjct: 91  DFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWF 150

Query: 262 -----QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + V ++ +I  Y +    ++A N+    +N  I  + I  ++++    K G ++
Sbjct: 151 RNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMME 210

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
               ++  +  + +  D   Y  ++ A  + G +  AKR+L E+ +    PN       I
Sbjct: 211 LFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVI 270

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + + G I+EA  + R   + G V +   +  +     R K+       FE+M+  G  
Sbjct: 271 EGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 330

Query: 433 PDSHIIALVLNSY 445
           PD +  + +++ +
Sbjct: 331 PDYNACSALIDGF 343


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 220/459 (47%), Gaps = 4/459 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV++    RA   E A  L D M  +G+ P   TY++++    + GM+D A   
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M+   V+ D+  ++ LI    ++ +  +A+ I+  ++  GI PDLV+++ +I +F +
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EMR  G+ PD V Y+ ++  +       +AL V  EM    C  D+ T
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +     DA+ L   MR+ G+ P + ++ TL+  Y       +A+ LF  M 
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  ++VTYNT+I    +  + +KA +L  +M +R I PN +TYS +I    + G+++
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A     ++ + G+  + + Y ++I  Y R G V+  ++ L ++      P+ I   T I
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  ++ +A  +           D+  +  +I  FS +        +FEKM + G  
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           PD +    ++N +      + A  L+ EM + G    D+
Sbjct: 609 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 37/422 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V ++ +++    R  + E A  ++ EMR RGI PD  ++S LI  F + G  D A++
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    +  D V+Y+ +I    +    S A+ +   +   G +PD+V YNT++N   
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 377

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L+ EMRE+GV PD  +++TL++ Y    K  +AL +F  M       D+ 
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 437

Query: 196 TCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T N +ID     G LD A D   L+  M    I P+ V+Y+ L+  + E     +A    
Sbjct: 438 TYNTLIDGMCRQGDLDKAND---LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 494

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K I  N++TYN++IK Y +S    K    +Q+M    + P+ ITY+T+I  + K 
Sbjct: 495 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 554

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            K+  A  L   +    V+ D V Y  +I      G   H                    
Sbjct: 555 DKMHDAFKLLNMMEKEKVQPDVVTYNMLI-----NGFSVH-------------------- 589

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 G ++EA W+F +    G   D   +  MI             ++ ++M   G+ 
Sbjct: 590 ------GNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFA 643

Query: 433 PD 434
           PD
Sbjct: 644 PD 645



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 224/485 (46%), Gaps = 22/485 (4%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           YT + ++  + K   FD   + + +ME+  V  D+V ++ +++   +  D   A+++   
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           + S G+ P +V YN+++    ++ ++ +A  + +EM + GV PD  S++ L+  +    +
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             EAL ++ EM       DL + + +I ++ +      A      MR  G+ P  V Y  
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++  +  A L  +A+ +   M       +VVTYNT++    K      A  L+ EM+ RG
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+  T++T+I  +   GKLD+A  LF  + +  +  D V Y T+I    R G +  A 
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L  ++      P     +IL       G++E+A     +  + G + +I  +  +I+ +
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R+   +   +  +KM      PD      +++ Y K  +   A  L + M++E  V  D
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK-VQPD 575

Query: 471 QVHFQMLSLYGARKDFNMLES--LFERLDSD----------SNINKKELHHVVAGIYERA 518
            V + ML + G     N+ E+  +FE++ +           S IN     HV AG  + A
Sbjct: 576 VVTYNML-INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING----HVTAGNSKEA 630

Query: 519 NRLND 523
            +L+D
Sbjct: 631 FQLHD 635



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 6/248 (2%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A   +RL+     E N  T N M+  Y K+LE +K   ++ EM+ R + P+ +T++ ++ 
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              +AG  + A  L   + S G++   V Y +++    R G+   A  +  E+      P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 368 RETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
              + TIL     R G IEEA  ++++    G   D+  F C+I LF+R  K  + +   
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            +MR  G  PD  I  +V+  + +      A  +  EM   GC+  D V +  L L G  
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYNTL-LNGLC 377

Query: 484 KDFNMLES 491
           K+  +L++
Sbjct: 378 KERRLLDA 385



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 107/214 (50%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P +  YN ++  + R    + A+ L+D+M  R I P+  TYS LI    ++G  + A
Sbjct: 431 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +L +M    +  +++ Y+++I+   +  + SK      ++  + + PDL+ YNT+I+ 
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K     +A  L+  M ++ V+PD V+Y+ L+N +  +    EA  +F +M       D
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 610

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
             T   MI+ +     +K+A +L   M + G  P
Sbjct: 611 RYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 35/145 (24%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + SP +  YN ++   ++  +   A  L + M +  + PD  TY+ LI  F   G    A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             W                                  IF ++ + GI PD   Y +MIN 
Sbjct: 596 -GW----------------------------------IFEKMCAKGIEPDRYTYMSMING 620

Query: 134 FGKAKLFKEARLLIEEMREQGVKPD 158
              A   KEA  L +EM ++G  PD
Sbjct: 621 HVTAGNSKEAFQLHDEMLQRGFAPD 645


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 207/424 (48%), Gaps = 8/424 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P V +YN ++  + +    + A+  + EM  R ++PD  TY+++I    K    
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+  L  M    V  +   Y++++          KAI IF ++ S GI PD+V YN++
Sbjct: 63  DRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   K     EAR + + M ++G+KPD  +Y TLL+ Y      VE   + A M +   
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    NI+I  Y + +   +   +F  MR+ G+ P+ V+Y T++    +     +A+ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            F  M  K +  NVV Y ++I       + EKA  L+ E+ ++GI PN + ++TI+    
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           K G++  +  LF  L   GV  D + Y T+I  Y   G +  A +LL  +     +P+++
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +  R+E+A  +F++    G   DI  +  ++    R ++ A   E++ ++
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418

Query: 427 RSAG 430
             +G
Sbjct: 419 TESG 422



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 43/418 (10%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           PD  +Y+T+I    KEG  D A     +M   RVS D V Y+++I    K     +A+ +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
            + +    ++P+   YN++++ +  +   ++A  +  +M   G++PD V+Y++L++   +
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           N K  EA                                    ++F SM K G+ P + +
Sbjct: 125 NGKCTEA-----------------------------------RKIFDSMVKRGLKPDITT 149

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y TLL  Y       E   L  LM +  ++ +   +N +I  Y K  + ++   +  +M+
Sbjct: 150 YGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +G+ PNA+ Y T+I    K G+LD A + F+++   G+  + V+Y ++I A        
Sbjct: 210 QQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWE 269

Query: 352 HAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A+ L+ E+      PN +   T +  L + GR+ E+  +F      G   D+  +  +I
Sbjct: 270 KAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + +    K    +++   M S G  PDS   + ++N Y K+   E A  L+ EM+  G
Sbjct: 330 DGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 166/330 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ PD  TY TL+  +  +G        
Sbjct: 110 PDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDL 169

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M Q+ +  D  +++ LI    K     + + +FS+++  G+ P+ V Y T+I+   K
Sbjct: 170 LALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCK 229

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A L  E+M ++G+ P+ V Y++L++      K+ +A  +  E+ +     ++  
Sbjct: 230 LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +     ++ +LF  +  +G++P V++Y+TL+  Y  A     A+ L   M 
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMV 349

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTY+T+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 350 SVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            A  L+ ++  SG +++   Y  +++ + +
Sbjct: 410 AAKELYARITESGTQLELSTYNIILMDFAK 439



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 138/299 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y  +L            H L   M Q G+  D + ++ LI  + K+   D  +  
Sbjct: 145 PDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLV 204

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q  ++ + V Y  +I+   KL     A+  F ++   G+ P++V Y ++I+    
Sbjct: 205 FSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCT 264

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +++A  LI E+ +QG+ P+ V ++T+L+   +  + +E+  +F  +  +    D+ T
Sbjct: 265 YDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVIT 324

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y        A +L   M  +G+ P  V+Y+TL+  Y +     +A+ LF+ M+
Sbjct: 325 YSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME 384

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              +  +++TYN ++    ++     A  L   +   G +    TY+ I+  + K   L
Sbjct: 385 SNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 84/167 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  +N +L ++ +  +   +  LFD +   G+ PD  TYSTLI  +   G  D A+ 
Sbjct: 284 NPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMK 343

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M    +  D V YS LI    K++    A+++F  ++S+G+ PD++ YN +++   
Sbjct: 344 LLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLF 403

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + +    A+ L   + E G + +  +Y+ +L  + + +  +     F
Sbjct: 404 RTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCF 450



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 2/229 (0%)

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P+ ++Y+TII    K G +D+A + + ++    V  D V Y ++I A  +   +  A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 357 LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           L  +  PN     + +     +G+ E+A  +FR+    G   D+  +  +++   +N K 
Sbjct: 69  LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
               ++F+ M   G  PD      +L+ Y          DL + M + G      V   +
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 477 LSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAGIYERANRLNDA 524
           +  Y  ++  + +  +F ++       N      V+ G+  +  RL+DA
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLC-KLGRLDDA 236


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 253/566 (44%), Gaps = 40/566 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++ Y P++  +N ++           A      +  +G   D++TY TLI    K G   
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A+  LQ+ME+  V  +LV+YS LI+   K    S A+ + S++   GI+ D V YN++I
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +       ++E   L+ +M  + V PD  +++ L++   +  + +EA  V A M++    
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N +++ Y   +   +A  LF  M K G++P V++YN L+  Y + ++  EA+ L
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357

Query: 252 FRLMQRKEI-----------------------------------EQNVVTYNTMIKIYGK 276
           F+ +  K +                                     +VVTYN +I    K
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                +A  ++  M  +G++PN +TY+ ++  +     ++ A  +F ++  SG+E D + 
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAF 392
           Y  +I  Y +  +V  A  L  E+R  N IP      + I  L   GRI     +  +  
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           D+G+  D+  +  +++ F + + +   I +F ++   G +PD +    ++++  K  + +
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLK 596

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
            A+D    +   GC  + Q +  +++       F     L  +++ +          ++ 
Sbjct: 597 MAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656

Query: 513 GIYERANRLNDASRIMNRMNKRRTFN 538
           G+  + N  + A ++   M  R   N
Sbjct: 657 GVLLQRNETDKAEKLREEMIARGLVN 682



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 209/452 (46%), Gaps = 4/452 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    ++ +L  ++R   +  A  LF +++ +GI+P   T++ LI C+  +     A S 
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  + +     +LV ++ +I          KA+     L + G + D   Y T+IN   K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K A  L++EM +  V+P+ V YS L++   ++    +AL + +++ E    LD  T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID    +   ++  +L   M +  +DP   ++N L+    +     EA  +  +M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++  + ++VTYN +++ Y       +A  L   M  RG+EP+ + Y+ +I  + K   +D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
            A +LF++L +  +      Y ++I      G ++H K+LL E+    + P+ +     I
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GRI EA  V       G   +I  +  M++ +          ++F +M  +G  
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           PD     +++N Y K    + A  L+ EM+ +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 208/485 (42%), Gaps = 4/485 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+  + +++           A  L   + + G  P+  T++T+I  F   GM   A+ 
Sbjct: 87  SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + Q +       D   Y  LI    K      A+ +   ++ S + P+LV Y+ +I+   
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +A  L  ++ E+G+  D V+Y++L++      ++ E   +  +M   N   D  
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+ID   +     +A  +   M K G  P +V+YN L+  Y   E   EA  LF  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ +E +V+ YN +I  Y K+   ++A  L +E+ N+ + P   +Y+++I     +G++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
                L  ++  S    D V Y  +I A  + G +  A  +L  +     +PN +     
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +        +  A  +F +   +G   DI  +  +I  + + +     I +F++MR    
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD      +++    L       +L  EM + G       +  +L  +   + F+   S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 492 LFERL 496
           LF ++
Sbjct: 567 LFRQI 571



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 11/405 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YNV++    + K  + A  LF E+  + + P   +Y++LI      G        
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M       D+V Y+ LI+   K     +A+ +   +   G+ P++V YN M++ +  
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A+ +   M + G++PD ++Y+ L+N Y +     EA+ +F EM   N   D+ +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID    L        L   M   G  P V++YN LL  + + + F +AI LFR + 
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + I  +  T + ++    K  + + A + ++ +   G  PN  TY+ +I    K G   
Sbjct: 573 -EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFG 631

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI---- 372
            A +L  K+  +    D + ++ +I    +      A++L  E+     +  E ++    
Sbjct: 632 EAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSH 691

Query: 373 -TILARAGRIEEATWVFR-QAFDAGEVKDISVFGCMIELFSRNKK 415
                 +   +  T  +R QA  AG  +    F C  +  SR+ +
Sbjct: 692 NVFFPASSGFQSVTEFYRVQASHAGSHR----FNCTTDPISRSNQ 732



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 133/324 (41%), Gaps = 39/324 (12%)

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +A++ F  M  V  P   +  + ++    ++     A  LF  ++  GI PS+ ++  L+
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK------------------------ 272
             Y        A  L   + +   + N+VT+NT+I                         
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 273 ----IYG-------KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
                YG       K+ + + A +L+QEM+   ++PN + YS +I    K G +  A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LAR 377
             ++   G+ +D V Y ++I     VG      +LL ++ + N  P +    I    L +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            GRI EA  V       GE  DI  +  ++E +   +      E+F +M   G  PD   
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 438 IALVLNSYGKLREFETADDLYSEM 461
             ++++ Y K +  + A  L+ E+
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKEL 361



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 4/289 (1%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA   F  M ++   P    ++ LL        +  AI LF  +Q K I  ++ T+  +I
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y        A +L+  +   G +PN +T++TII  +   G + +A    Q L + G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWV 387
            D   Y T+I    + G +  A  LL E+     QPN +     I  L + G + +A  +
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q  + G + D   +  +I+      ++  V ++  KM      PD +   +++++  K
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
                 A  + + M + G       +  ++  Y +R++ +    LF R+
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 210/430 (48%), Gaps = 6/430 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +++ YN +++   +  + + A  L +EM+  GI+PD Y+YS L+  F  EG  +S ++ +
Sbjct: 259 NIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLI 318

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q+ME       LV  ++++   R     +  ++ F  L + G   DL++Y+T+I+ F K 
Sbjct: 319 QEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKG 378

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              K A  L+ EMR+ G+ PD + Y +L+  Y       EAL  F  M +     D+ TC
Sbjct: 379 HNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITC 438

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N ++D Y      ++A      M+   I P+  +Y+ ++    + +   +A  +  +M +
Sbjct: 439 NHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFK 498

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHE-KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             I  +V+ Y T++  Y K  ++  KA  L ++M   G +P+ +T + ++ ++ K GK+ 
Sbjct: 499 DNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMS 558

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
           +A  LF+++   G+  D   +  +I  Y RVG V  A  +  ++++ N  P     T L 
Sbjct: 559 KALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLV 618

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  R++ AT +           D+  +  +I  + R +      EVF++M+  G  
Sbjct: 619 DGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTL 678

Query: 433 PDSHIIALVL 442
           PD HI  L L
Sbjct: 679 PD-HIAYLTL 687



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/474 (22%), Positives = 212/474 (44%), Gaps = 6/474 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P+V  Y V +  + R    E A     ++R      + Y Y+ LI  F ++G  
Sbjct: 217 EEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRP 276

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+  L++M+ + +S D+  YS L+       D    +++   ++     P LV   ++
Sbjct: 277 DEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSV 336

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +       L  +      E+  +G K D +SYSTL++ +++ H    A ++  EM +   
Sbjct: 337 LMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D      +I  Y +    K+A + F++M + G+ P +++ N ++  Y     F EA+ 
Sbjct: 397 VPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALI 456

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M+ + I  N  TY+ +I    K    EKA  ++  M    I P+ I Y+TI+  + 
Sbjct: 457 YINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYA 516

Query: 311 KAGKLD-RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           K  K   +A  L++K+   G + D V    ++  + + G ++ A  L  E+ +      E
Sbjct: 517 KQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDE 576

Query: 370 TAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
            A T +     R G ++ A  ++++        ++  + C+++ F + K+      + + 
Sbjct: 577 FAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDD 636

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           M+     PD      ++  Y ++   + A +++ EM+++G    D + +  L L
Sbjct: 637 MKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKG-TLPDHIAYLTLGL 689



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/490 (21%), Positives = 214/490 (43%), Gaps = 45/490 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-----FDS 72
           ++ + N +L+ +    + E    LFD+++  G +P+ YTY+ +I  + KE        + 
Sbjct: 149 NISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQ 208

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L++ME+   +  +V Y   I    ++     A +    L+SS    ++  YN +I 
Sbjct: 209 ASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQ 268

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F +     EA  L+EEM+++G+ PD  SYS L+N +         +++  EM   N   
Sbjct: 269 GFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKP 328

Query: 193 DLTTC-------------NIMIDVYGQLDM----------------------AKDADRLF 217
            L  C             N  ++ + +L                         K A+ L 
Sbjct: 329 PLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLV 388

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             MRK G+ P  + Y +L+R Y       EA+  F  M +  ++ +++T N ++  Y   
Sbjct: 389 HEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSR 448

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            + E+A   + +M+++ I PN+ TYS II    K   +++A  +   +    +    + Y
Sbjct: 449 GQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHY 508

Query: 338 QTMIVAY-ERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAF 392
            T++  Y ++      A +L  ++ +    P    +T+L    ++ G++ +A  +F++  
Sbjct: 509 TTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMA 568

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           + G  +D   F  +I+ + R         +++KM+     P+      +++ + KL+  +
Sbjct: 569 EEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLD 628

Query: 453 TADDLYSEMQ 462
            A  L  +M+
Sbjct: 629 MATMLIDDMK 638



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/453 (21%), Positives = 193/453 (42%), Gaps = 45/453 (9%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           S LI  F    M   A     Q ++  V  ++   + L++   +        S+F  LK+
Sbjct: 119 SLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKN 178

Query: 118 SGIVPDLVAYNTMINVFGKAKL-----FKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
           SG  P++  Y  MIN + K +       ++A L++EEM E+G  P  V+Y   ++     
Sbjct: 179 SGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRV 238

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
               +A +   ++   N PL++   N +I  + Q     +A +L   M+  GI P + SY
Sbjct: 239 GSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSY 298

Query: 233 NTLLRVY---GEAE--------------------------------LFGEAIHLFRLMQR 257
           + L+  +   G+ E                                L  + ++ F  +  
Sbjct: 299 SILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSA 358

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K  + ++++Y+T+I  + K    + A NL+ EM+  G+ P+ I Y ++I  + + G L  
Sbjct: 359 KGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKE 418

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI--- 374
           A   F  +   G++ D +    ++  Y   G    A   +++++  N +P     ++   
Sbjct: 419 ALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIIN 478

Query: 375 -LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN-KKYANVIEVFEKMRSAGYF 432
            L +   +E+A  V    F       +  +  +++ +++  K      +++ KM   G  
Sbjct: 479 WLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCK 538

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           PD+  + ++++ + K  +   A +L+ EM EEG
Sbjct: 539 PDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG 571



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 172/400 (43%), Gaps = 43/400 (10%)

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM----RE 152
           E+AR++  +SK+++++      G    + A+ T+++VF  A L +EA+ L+ ++    +E
Sbjct: 40  EVARQVK-FSKSVNVY------GFFYSINAFRTIVHVFALAGLQREAQYLLTDIVFYYKE 92

Query: 153 QGVK-----------PDTVSYST-----LLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           + +            P+ V  S      L+ ++  N    +A  VF +  ++   L++++
Sbjct: 93  ENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISS 152

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL----- 251
           CN ++    + D  +    LF  ++  G  P+V +Y  ++  Y + E  G+ I +     
Sbjct: 153 CNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCK-ERHGQNIDMEQASL 211

Query: 252 -FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M+ K     VVTY   I    +    E A N +Q++++     N   Y+ +I  + 
Sbjct: 212 ILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFC 271

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G+ D A  L ++++  G+  D   Y  ++ A+   G +     L+ E+   N  P   
Sbjct: 272 QKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLV 331

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             T     L   G + +    F +    G   D+  +  +I  F +     +   +  +M
Sbjct: 332 CCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEM 391

Query: 427 RSAGYFPDSHIIALVLNSY---GKLREFETADDLYSEMQE 463
           R  G  PD  I   ++  Y   G L+  E   + Y+ +Q+
Sbjct: 392 RKNGLVPDYIIYISLIREYCRKGCLK--EALKNFYTMLQD 429


>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
 gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
          Length = 558

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 213/452 (47%), Gaps = 33/452 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +  W+  +  Y      Y +++R   R  Q + A GLF EM++    PD  TY++LI
Sbjct: 136 AVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLI 195

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G +  AI+ +  M++  +      Y+N+I       ++ KA+ +  ++  +G+ 
Sbjct: 196 HAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVG 255

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDL+ +N +++ F     + +A    E M+   V PDT + + +++  V+   + EA+ +
Sbjct: 256 PDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIEL 315

Query: 182 FAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           F  M E    CP D+ T   ++  Y     A++   +F  M   G+ P++VSYN LL  Y
Sbjct: 316 FNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAY 375

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
               +  EA+  F+L+++   + ++V+Y +++  YG+S   EKA  +  EM+    +PN 
Sbjct: 376 ASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNK 435

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ++Y+ +I  +G AG L  A  L  ++   G++ D +   T++ A  R             
Sbjct: 436 VSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRC------------ 483

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
            RQP  I     I + A   R  +   V   A+++G        G  + L      Y   
Sbjct: 484 -RQPTKI----GIILAAAKSRGIQLNTV---AYNSG-------IGSYLSL----GDYKKA 524

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
           +E++  MR+    PD+    ++++   KL  F
Sbjct: 525 LELYTSMRTGNVKPDAVTYNILISGSCKLGSF 556



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 6/308 (1%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           +MI ++ + +    A  LF+ M++    P   +YN+L+  +  A  +  AI++   MQR 
Sbjct: 158 MMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRA 217

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  +  TYN +I   G +   +KA  L ++M   G+ P+ IT++ +++ +    +  +A
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKA 277

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA-- 376
              F+ ++SS V  D      +I    +V L   A  L + +R+  TI     +T  +  
Sbjct: 278 IAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIM 337

Query: 377 ----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 G+ E    VF      G   +I  +  ++  ++ +  +   +E F+ ++  G+ 
Sbjct: 338 YSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFK 397

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PD      +LN+YG+    E A ++++EM++  C  +   +  ++  YG+        SL
Sbjct: 398 PDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISL 457

Query: 493 FERLDSDS 500
              ++ D 
Sbjct: 458 LHEMEQDG 465



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 33/341 (9%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y  MI +  +     +AR L  EM+E   KPDT +Y++L++ +    ++  A+++  +M 
Sbjct: 156 YGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQ 215

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
               P   TT N +I+  G     K A  L   M + G+ P ++++N +L  +     + 
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS 275

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG--IEPNAITYST 304
           +AI  F +M+  ++  +  T N +I    K   + +A  L   M+ R     P+ +TY++
Sbjct: 276 KAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTS 335

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           I+  +   G+ +    +F  + + GV  + V Y  ++ AY   G+   A      L+Q  
Sbjct: 336 IMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNG 395

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
             P                               DI  +  ++  + R+       EVF 
Sbjct: 396 FKP-------------------------------DIVSYTSLLNAYGRSALPEKAREVFN 424

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +MR     P+      ++++YG     + A  L  EM+++G
Sbjct: 425 EMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDG 465


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 202/424 (47%), Gaps = 13/424 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +     ++R   R  +   A  + + +   G  PD  TY+ +I+ + K G  ++A+S 
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L +M    VS D+V Y+ ++   R L D  K   A+ +  R+      PD++ Y  +I  
Sbjct: 195 LDRMS---VSPDVVTYNTIL---RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +     +A  L++EMR++G  PD V+Y+ L+N   +  +  EA+    +M    C  +
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA++L   M + G  PSVV++N L+       L G AI +  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +   + N ++YN ++  + K  + ++A   ++ M +RG  P+ +TY+T++    K G
Sbjct: 369 KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K++ A  +  +L S G     + Y T+I    + G    A +LL E+R    +P+TI   
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + +  L+R G+++EA   F +    G   +   F  ++    + ++    I+    M + 
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548

Query: 430 GYFP 433
           G  P
Sbjct: 549 GCKP 552



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 204/445 (45%), Gaps = 7/445 (1%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LR ++R  + E      + M   G  PD    +TLI  F + G    A   L+ +E    
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             D++ Y+ +I    K  + + A+S+  R+  S   PD+V YNT++     +   K+A  
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           +++ M ++   PD ++Y+ L+     +    +A+ +  EM +  C  D+ T N++++   
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     +A +    M   G  P+V+++N +LR       + +A  L   M RK    +VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T+N +I    +     +A +++++M   G +PN+++Y+ ++  + K  K+DRA    +++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
            S G   D V Y TM+ A  + G V  A  +L++L      P  I   T I  LA+AG+ 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +A  +  +        D   +  ++   SR  K    I+ F +    G  P++     +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 442 LNSYGKLREFETADDLYSEMQEEGC 466
           +    K R+ + A D    M   GC
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGC 550



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 179/373 (47%), Gaps = 5/373 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +LD + +   Y P V  Y +++    R      A  L DEMR RG  PD  TY+ L
Sbjct: 222 QAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL 280

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    KEG  D AI +L  M       +++ ++ ++        +  A  + + +   G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P +V +N +IN   +  L   A  ++E+M + G +P+++SY+ LL+ + +  K   A+ 
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
               M    C  D+ T N M+    +    +DA  +   +   G  P +++YNT++    
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A   G+AI L   M+ K+++ + +TY++++    +  + ++A     E +  G+ PNA+
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAV 520

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLH 358
           T+++I+    K  + DRA      + + G +     Y  +I  +AYE  G+   A  LL+
Sbjct: 521 TFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYE--GMAKEALELLN 578

Query: 359 ELRQPNTIPRETA 371
           EL     + R +A
Sbjct: 579 ELCNKGLMKRSSA 591



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 189/404 (46%), Gaps = 14/404 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++++LD ++     SP V  YN +LR++  + + + A  + D M QR   PD  TY+ LI
Sbjct: 191 ALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               ++     A+  L +M     + D+V Y+ L+    K     +AI   + + SSG  
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ +N ++        + +A  L+ +M  +G  P  V+++ L+N          A+ +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRV 238
             +M +  C  +  + N ++  + +    K  DR    + +M   G  P +V+YNT+L  
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCK---EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +     +A+ +   +  K     ++TYNT+I    K+ +  KA  L+ EM+ + ++P+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            ITYS+++    + GK+D A   F +    GV  + V + ++++   +      A   L 
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLV 543

Query: 359 ELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVK 398
            +      P ET+ TI    LA  G  +EA  +  +  + G +K
Sbjct: 544 YMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 587



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 168/359 (46%), Gaps = 8/359 (2%)

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           FS   SS ++ D+ + N +  +    +L +E    +E M   G  PD +  +TL+  +  
Sbjct: 91  FSSANSSFVLEDVESNNHLRQLVRTGEL-EEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             K  +A  +   +       D+ T N+MI  Y +   A + +     + +M + P VV+
Sbjct: 150 MGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCK---AGEINNALSVLDRMSVSPDVVT 206

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YNT+LR   ++    +A+ +   M +++   +V+TY  +I+   +     +A  L+ EM+
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR 266

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
           +RG  P+ +TY+ ++    K G+LD A      + SSG + + + +  ++ +    G   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 352 HAKRLLHE-LRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A++LL + LR+   P+ +     I  L R G +  A  +  +    G   +   +  ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             F + KK    IE  E+M S G +PD      +L +  K  + E A ++ +++  +GC
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/368 (19%), Positives = 142/368 (38%), Gaps = 48/368 (13%)

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
           E  KF+E +         N P D+  C  +I  + ++   + A ++   +   G  P V+
Sbjct: 120 EGFKFLENMVYHG-----NVP-DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +YN ++  Y +A   GE  +   ++ R  +  +VVTYNT+++    S + ++A  ++  M
Sbjct: 174 TYNVMISGYCKA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             R   P+ ITY+ +I    +   + +A  L  ++R  G   D V Y  ++    + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A + L+++     QPN I     +  +   GR  +A  +       G    +  F  +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I    R       I++ EKM                                    + GC
Sbjct: 351 INFLCRKGLLGRAIDILEKM-----------------------------------PKHGC 375

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
             +   +  +L  +   K  +      ER+ S         ++ +     +  ++ DA  
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 527 IMNRMNKR 534
           I+N+++ +
Sbjct: 436 ILNQLSSK 443


>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 208/443 (46%), Gaps = 31/443 (6%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ I +WI + + + P V  +N+++    R KQW  A   F  M++    P   +++ L+
Sbjct: 84  AIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLM 143

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + + G  + A   L +M++   S  LV Y+  +E+  K   +  A  +F  +++ G+ 
Sbjct: 144 AAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVP 203

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P +  +  MIN++GKA    +A  L + MR+    P   +Y+ L+N +      V A  +
Sbjct: 204 PAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEI 263

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           FAE+  V    D+ T N +++ Y +      A  +F +M + G+    VSYN L+  +G 
Sbjct: 264 FAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGR 323

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A L  +A  ++  M++   +  + ++  ++  + K+     A N ++ +++ G+EP+   
Sbjct: 324 AGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFM 383

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           +++++  +G +G++D+   L++ ++ S  + D +   T+I  Y                 
Sbjct: 384 FNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVY----------------- 426

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
                         A+ G IE A  +F      G   D+  +  ++  +S+ K Y   + 
Sbjct: 427 --------------AQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVS 472

Query: 422 VFEKMRSAGYFPDSHIIALVLNS 444
           V++KM  AG  PD     ++L+S
Sbjct: 473 VYQKMLIAGCIPDRATAKVLLSS 495



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 193/402 (48%), Gaps = 5/402 (1%)

Query: 100 RKLSDYSKAISIFSR-LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           R+   +  AI I+   L+ S   PD+  +N +++ +G+ K + EA      M++    P 
Sbjct: 76  RRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPT 135

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             S++ L+  Y    +   A  V  EM E NC   L T N  ++V  +    + A+ +F 
Sbjct: 136 ETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFR 195

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M+  G+ P+V ++  ++ +YG+A    +A HLF+ M++     ++ TY  +I  + +  
Sbjct: 196 EMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREG 255

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A  +  E+Q+ G  P+  TY+ ++  + + G    A  +F+ +  +GV+ D V Y 
Sbjct: 256 NCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYN 315

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDA 394
            +I A+ R GL++ A+ +   +++    P   +    ++   +AGR+ +A    R+    
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D  +F  ++  +  + +   +  ++E M+ +   PD   +  ++N Y +    E A
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +++++ ++ +G          ++  Y  RK +    S+++++
Sbjct: 436 EEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKM 477



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 31/340 (9%)

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+   N+++D YG+     +A+  F  M+K    P+  S+N L+  Y        A  + 
Sbjct: 100 DVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVL 159

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+       +VTYNT +++  KS   + A ++ +EMQNRG+ P   T++ +I I+GKA
Sbjct: 160 HEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKA 219

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
               +A  LFQ +R +        Y  +I A+ R G    A+ +  EL+           
Sbjct: 220 HHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQ----------- 268

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                                 G V DI  +  ++E +SR    A   EVFE M  AG  
Sbjct: 269 --------------------SVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVK 308

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            D     ++++++G+      A  +Y  M++ G   + + H  +LS +         E+ 
Sbjct: 309 ADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENF 368

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             RL+S        + + + G Y  + R++    +   M 
Sbjct: 369 VRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQ 408


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 221/486 (45%), Gaps = 45/486 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           SW  +ME    S  +V Y+ L+    K     +A  IF R+  +G  P+ + Y+ +++  
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570

Query: 135 GKAKLFKEARLLIEEM----------------REQGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA   ++A  +  +M                    + P+ V+Y  L++   + HK V+A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +   M+   C  +    + +ID + ++    +A  +F+ M K G  P+V +Y +L+  
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +      AI +   M       NVVTY  MI    +  E +KA  L+  M+ RG  PN
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPN 750

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +TY+++I   GK+GK+D +  LF ++ + G   + V Y+ +I      GL+  A  LL 
Sbjct: 751 VVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 810

Query: 359 ELRQ---PNTIPRETAIT------ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           E++Q   P  +    ++        +A  G +EE           G V    V+G +I+ 
Sbjct: 811 EMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELE-------SHGMVSIAPVYGLLIDS 863

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPD--------SHIIALVLNSYGKLREFETADDLYSEM 461
           FS+  +    +E+ ++M       +        S I AL L S     + E A +LYSE+
Sbjct: 864 FSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLAS-----QLEKAFELYSEI 918

Query: 462 QEEGCV 467
             +G V
Sbjct: 919 TRKGVV 924



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 241/547 (44%), Gaps = 31/547 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q ++   +  EM + G   D++T         KEG +  A 
Sbjct: 203 YRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDA- 261

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++    D VL + +I    + S + +AIS   R++ +  +P++V Y T++  F
Sbjct: 262 --LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGF 319

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M  +G  P+   +++L++ Y     +  A  +   M    CP   
Sbjct: 320 LKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGY 379

Query: 195 TTCNIMI------DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I      +     D+   A++++  M       + V+     R       F +A
Sbjct: 380 VVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKA 439

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + +LM RK    +  TY+ +I    ++++ EKA  L QEM++ G+ P+  TY+ +I  
Sbjct: 440 FQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDS 499

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
           + K G +++A   F ++ S G     V Y  ++ AY +   V  A  + H +      PN
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPN 559

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDA-----------GEVKD-----ISVFGCMIE 408
           TI     +  L +AG  ++A  V+ +               GE  D     +  +G +I+
Sbjct: 560 TITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALID 619

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  K  +  E+ + M S G  P+  I   +++ + K+ + + A +++  M + G + 
Sbjct: 620 GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLP 679

Query: 469 SDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           +   +  ++ +++  R+    ++ L + L+S    N      ++ G+  R      A ++
Sbjct: 680 TVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC-RIGECQKALKL 738

Query: 528 MNRMNKR 534
           ++ M KR
Sbjct: 739 LSMMEKR 745



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/506 (22%), Positives = 209/506 (41%), Gaps = 59/506 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWE------LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P    YN+ + ++   ++        LA  +++EM       ++   +    C    G F
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 436

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   ++ M +     D   YS +I    +     KA  +F  +KS G++PD+  Y  +
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K  L ++AR   +EM   G  P  V+Y+ LL+ Y++  +  +A  +F  M +  C
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 191 PLDLTTCNIMID-------------VYGQLDMAKD---ADRLFWSMRKMGIDPSVVSYNT 234
             +  T + ++D             VY ++    D   +D  F       I P+VV+Y  
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+    +A    +A  L  +M     E N + Y+ +I  + K  + + A  +   M   G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
             P   TY+++I    K  +LD A  +  ++  S    + V Y  MI    R+G    A 
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 355 RLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI--- 407
           +LL  + +    PN +   + I  L ++G+++ +  +F Q    G   +   +  +I   
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796

Query: 408 ----------ELFSRNKK---------YANVIEVF-----------EKMRSAGYFPDSHI 437
                      L S  K+         Y +V++ F           E++ S G    + +
Sbjct: 797 CAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPV 856

Query: 438 IALVLNSYGKLREFETADDLYSEMQE 463
             L+++S+ K    E A +L+ EM E
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMME 882



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 199/449 (44%), Gaps = 29/449 (6%)

Query: 8   WINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           W +E      SPSV  Y  +L   L+ KQ   A  +F  M   G AP+  TYS L+    
Sbjct: 512 WFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLC 571

Query: 66  KEGMFDSAISWLQQM----------------EQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           K G    A     +M                  D ++ ++V Y  LI+   K      A 
Sbjct: 572 KAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 631

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +   + S+G  P+ + Y+ +I+ F K      A+ +   M + G  P   +Y++L++  
Sbjct: 632 ELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM 691

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            ++ +   A+ V ++M E +C  ++ T   MID   ++   + A +L   M K G +P+V
Sbjct: 692 FKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNV 751

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y +L+   G++     ++ LF  M  +    N VTY  +I     +   ++A +L+ E
Sbjct: 752 VTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 811

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERVG 348
           M+          Y +++  + K  K   +  L ++L S G V I PV Y  +I ++ + G
Sbjct: 812 MKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPV-YGLLIDSFSKAG 868

Query: 349 LVAHAKRLLHELRQP----NTIPRET---AITILARAGRIEEATWVFRQAFDAGEVKDIS 401
            +  A  L  E+ +     N   ++T    I  L  A ++E+A  ++ +    G V ++S
Sbjct: 869 RLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELS 928

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            F C+I+   +  K+   +++   M   G
Sbjct: 929 AFICLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 13/372 (3%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           ++KA+    RLK  G  P    YN ++ V   A        + +EM E G   D  +   
Sbjct: 188 WAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGC 247

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
                 +  ++ +AL V  E  +    LD   C  MI    +  +  +A      MR   
Sbjct: 248 FAQALCKEGRWSDAL-VMIEREDFK--LDTVLCTQMISGLMEASLFDEAISFLHRMRCNS 304

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P+VV+Y TLL  + + +  G    +  +M  +    N   +N+++  Y  + ++  A 
Sbjct: 305 CIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAY 364

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML------FQKLRSSGVEIDPVLYQ 338
            L+  M   G  P  + Y+  I       +L    +L      ++++ +S   ++ V   
Sbjct: 365 KLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA 424

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
                   +G    A +++  + +    P+T      IT L  A ++E+A  +F++    
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D+  +  +I+ F +          F++M S G  P       +L++Y K ++   A
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544

Query: 455 DDLYSEMQEEGC 466
            D++  M + GC
Sbjct: 545 SDIFHRMVDAGC 556



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 141/317 (44%), Gaps = 5/317 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++    +  + + A  +F  M + G  P  +TY++LI    K+   D AI  
Sbjct: 644 PNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKV 703

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + ++V Y+ +I+   ++ +  KA+ + S ++  G  P++V Y ++I+  GK
Sbjct: 704 LSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGK 763

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +     +  L  +M  QG  P+ V+Y  L+N         EA S+ +EM +   P  +  
Sbjct: 764 SGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++  + +  +A     L   +   G+      Y  L+  + +A    +A+ L + M 
Sbjct: 824 YCSVVQGFSKKFIASLG--LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMM 881

Query: 257 RKEIEQNVV---TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                 N+    TY ++I+    + + EKA  L  E+  +G+ P    +  +I    K  
Sbjct: 882 EVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVN 941

Query: 314 KLDRAAMLFQKLRSSGV 330
           K + A  L   +   GV
Sbjct: 942 KWNEALQLCYSMCDEGV 958


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 226/481 (46%), Gaps = 31/481 (6%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L  + +  + +L+   F +M   GI    +TY+ +I    KEG  + A
Sbjct: 16  RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMA 75

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S   QM++   + D+V Y++LI+   KL    + I IF ++K +   PD++ YN +IN 
Sbjct: 76  RSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 135

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K +   +A   + EM+  G+KP+ V+YST ++ + +     EA+  F +M  V    +
Sbjct: 136 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 195

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   +     +A +L   + + GI  +VV+Y  LL    E     EA  +FR
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG--K 311
            M    +  N  TY  ++  + K+ E E A ++++EM+ + I+P+ + Y TI  +WG   
Sbjct: 256 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI--LWGLCN 313

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH------------------- 352
             +L+ A +L  +++ SG+  + V+Y T++ AY + G                       
Sbjct: 314 ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNN 373

Query: 353 ----AKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFG 404
               AK+L  E+     +P + A T L     + G ++EA  +  +  + G   D+  + 
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYT 433

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I   S + +      + ++M   G  PD  +   ++  Y  L + + A +L +EM + 
Sbjct: 434 ALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 493

Query: 465 G 465
           G
Sbjct: 494 G 494



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 169/378 (44%), Gaps = 16/378 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P V  YN ++    + ++   A     EM+  G+ P+  TYST I  F KEGM 
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             AI +   M +  ++ +   Y++LI+   K  + ++A+ +   +  +GI  ++V Y  +
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   +    KEA  +   M   GV P+  +Y+ L++ +++  +   A  +  EM E   
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             DL     ++         ++A  L   +++ GI+ + V Y TL+  Y ++    EA+ 
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M              ++    K+   E A  L  EM ++G+ P+ I Y+ +I    
Sbjct: 358 LLEEML------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 405

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G L  A  L  ++   G+E+D   Y  +I      G V  A+ LL E+     +P E 
Sbjct: 406 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 465

Query: 371 AITILARA----GRIEEA 384
               L +     G+++EA
Sbjct: 466 VYMCLIKKYYALGKVDEA 483


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 216/452 (47%), Gaps = 5/452 (1%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+   YNV+L    R  + W     + +EMR  G+ PD +T ST+I   G++G+ D A+
Sbjct: 219 APTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAV 278

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           ++ + ++       +V Y+ L+++  K  +Y +A+ +   ++ SG  PD V YN +   +
Sbjct: 279 AFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSY 338

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A  ++EA   ++ M  +G+ P+  +Y+T++  Y    K  EAL++F  M +      +
Sbjct: 339 ARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYV 398

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N+++ + G+         +   M + G  P+ V++NT+L V G+  + G    +   
Sbjct: 399 NTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLER 458

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +E    T+NT+I  YG+      A  +  EM   G  P   TY+ ++++  + G 
Sbjct: 459 MKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGD 518

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  +  K+++ G + + + Y  ++  + + G  A  + +  E+ +    P    +  
Sbjct: 519 WTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRT 578

Query: 375 LA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     +  R+E     F++    G   D+ +F  M+ ++++N  Y    E+F+ ++  G
Sbjct: 579 LVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGG 638

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             PD      +++ Y K  E   A+ +   ++
Sbjct: 639 LSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 239/538 (44%), Gaps = 45/538 (8%)

Query: 4   AILDWINEEARYSPS-----VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           A+ D ++E     P      V AY  VL  +    ++E A  LF E+++ G+AP    Y+
Sbjct: 167 AVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYN 226

Query: 59  TLITCFGKEG-MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
            ++  +G+ G  +   ++ L++M    V  D    S +I    +     +A++ F  LKS
Sbjct: 227 VMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKS 286

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
            G VP +V YN ++ VFGKA  + EA  +++EM E G KPD V+Y+ L   Y     + E
Sbjct: 287 RGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEE 346

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A                               AK  D    +M   GI P+  +YNT++ 
Sbjct: 347 A-------------------------------AKCLD----TMVSKGILPNAFTYNTIMT 371

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            YG A    EA+ LF  M++      V TYN ++ + GK         ++ EM   G  P
Sbjct: 372 AYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTP 431

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +T++T++A+ GK G       + ++++S GVE+    + T+I AY R G  A+A ++ 
Sbjct: 432 NRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY 491

Query: 358 HELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+      P  T     +++L+R G    A  +  +  + G   +   +  +++  ++ 
Sbjct: 492 DEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKG 551

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
              A +  + +++     FP   I+  ++ S  K R  E  +  + E+   G      + 
Sbjct: 552 GNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIF 611

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             MLS+Y     +     +F+ +           ++ +  +Y ++N   +A +I+ R+
Sbjct: 612 NSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRL 669



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/517 (21%), Positives = 235/517 (45%), Gaps = 6/517 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P  F  + V+    R    + A   F++++ RG  P   TY+ L+  FGK G +  
Sbjct: 252 AGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYME 311

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L++ME+     D V Y+ L     +   Y +A      + S GI+P+   YNT++ 
Sbjct: 312 ALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMT 371

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +G A    EA  L + M++ G  P   +Y+ +L +  +  +F   L +  EM+   C  
Sbjct: 372 AYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTP 431

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T N M+ V G+  M     R+   M+  G++    ++NTL+  YG       A  ++
Sbjct: 432 NRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY 491

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M        + TYN ++ +  +  +   A +++ +M+N G +PN ++YS ++    K 
Sbjct: 492 DEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKG 551

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
           G       + +++    V    V+ +T++++  +   +   +R   E+     +P+ +  
Sbjct: 552 GNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIF 611

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + +++ A+ G   +A  +F      G   D+  +  M+++++++ +     ++ +++++
Sbjct: 612 NSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKT 671

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +   PD      V+N + K    + A  + SEM  +G       +  ++  Y +R+ F+ 
Sbjct: 672 SQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSE 731

Query: 489 LESLFERLDSDSNINKKEL-HHVVAGIYERANRLNDA 524
              +   +    N++  EL +  V   Y +A R ++A
Sbjct: 732 AREVVSYM-IQRNLSPMELTYRRVVDSYCKAKRFDEA 767



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 209/461 (45%), Gaps = 12/461 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE+   P    YN +  +  RA  +E A    D M  +GI P+ +TY+T++T +G  G  
Sbjct: 320 EESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKV 379

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++    M+++     +  Y+ ++ +  K S ++  + +   +  SG  P+ V +NTM
Sbjct: 380 DEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTM 439

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + V GK  +      ++E M+  GV+    +++TL++ Y        A  ++ EM     
Sbjct: 440 LAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGF 499

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              LTT N ++ V  +      A  +   M+  G  P+ +SY+ LL+ + +    G A  
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKG---GNAAG 556

Query: 251 LFRLMQRKEIEQNV----VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +   ++++  E  V    V   T++    K    E      QE+  RG +P+ + +++++
Sbjct: 557 I-EAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSML 615

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
           +++ K G   +A  +F  ++  G+  D + Y +M+  Y +      A+++L  L+    +
Sbjct: 616 SMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLK 675

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +   T +    + G I+EA  +  +    G    +  +  ++  ++  + ++   EV
Sbjct: 676 PDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREV 735

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
              M      P       V++SY K + F+ A     E+ E
Sbjct: 736 VSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAE 776



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/414 (21%), Positives = 178/414 (42%), Gaps = 71/414 (17%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+ DW+ +   + P V  YN++L  + +  ++ +   +  EM + G  P+R T++T++
Sbjct: 382 ALALFDWMKKNG-FIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTML 440

Query: 62  TCFGKEGM----------------------FDSAIS-------------WLQQMEQDRVS 86
              GK GM                      F++ IS                +M     +
Sbjct: 441 AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFT 500

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA--------- 137
             L  Y+ L+ +  +  D++ A SI +++K+ G  P+ ++Y+ ++    K          
Sbjct: 501 PCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 560

Query: 138 ---------------------KLFKEARL-----LIEEMREQGVKPDTVSYSTLLNLYVE 171
                                  FK  RL       +E+  +G KPD V ++++L++Y +
Sbjct: 561 EKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAK 620

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           N  + +A  +F  + +     DL T N M+D+Y + + + +A+++   ++   + P VVS
Sbjct: 621 NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVS 680

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YNT++  + +  L  EA  +   M    +   VVTY+T++  Y       +A  ++  M 
Sbjct: 681 YNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMI 740

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
            R + P  +TY  ++  + KA + D A     ++  +    D  L  T+    E
Sbjct: 741 QRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTLTARVE 794



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 139/315 (44%), Gaps = 26/315 (8%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-----QNRGIEPNAITY 302
           A+ L R ++ +    +      +++   +  +H+   +L+ EM      + G++  A  Y
Sbjct: 133 ALALVRWVRAEGGAADAAALEMVVRTLAREGQHDAVCDLLDEMLPLPPGSPGLDVRA--Y 190

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG-----LVAHAKRLL 357
           +T++      G+ +RA  LF +L+  GV    V+Y  M+  Y R+G     +VA    +L
Sbjct: 191 TTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVA----ML 246

Query: 358 HELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+R    +P+     T I    R G ++EA   F      G V  +  +  ++++F + 
Sbjct: 247 EEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKA 306

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             Y   + V ++M  +G  PD+     +  SY +   +E A      M  +G + +   +
Sbjct: 307 GNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTY 366

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             +++ YG     +   +LF+ +  +  I     ++++ G+  + +R N    ++  M++
Sbjct: 367 NTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSR 426

Query: 534 ------RRTFNSSLV 542
                 R T+N+ L 
Sbjct: 427 SGCTPNRVTWNTMLA 441


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 232/489 (47%), Gaps = 4/489 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  P+V  +N +   + + KQ+EL   L  +M  +GIA   YT S +I CF +     
Sbjct: 81  QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S + ++ +     D V+++ L+         S+A+ +  R+   G  P L+  NT++
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         +A +LI+ M E G +P+ V+Y  +LN+  ++ +   A+ +  +M E N  
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD    +I+ID   +     +A  LF  M   G    +++YNTL+  +  A  + +   L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M +++I  NVVT++ +I  + K  +  +A  L++EM  RGI PN ITY+++I  + K
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +L+ A  +   + S G + D + +  +I  Y +   +     L  E+       NT+ 
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +    ++G++E A  +F++        DI  +  +++    N +    +E+F K+ 
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +    D  I  ++++      + + A DL+  +  +G     + +  M+S    +   +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560

Query: 488 MLESLFERL 496
             + LF ++
Sbjct: 561 KADILFRKM 569



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 213/443 (48%), Gaps = 6/443 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P++   N ++  +    +   A  L D M + G  P+  TY  ++    K G   
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L++ME+  +  D V YS +I+   K      A ++F+ ++  G   D++ YNT+I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F  A  + +   L+ +M ++ + P+ V++S L++ +V+  K  EA  +  EM +    
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +ID + + +  ++A ++   M   G DP ++++N L+  Y +A    + + L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  N VTYNT+++ + +S + E A  L QEM +R + P+ ++Y  ++     
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G+L++A  +F K+  S +E+D  +Y  +I        V  A  L   L          A
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545

Query: 372 ITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             I    L R   + +A  +FR+  + G   D   +  +I     +       E+ E+M+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605

Query: 428 SAGYFPDSHIIALVLN--SYGKL 448
           S+G+  D   + +V+N  S G+L
Sbjct: 606 SSGFPADVSTVKMVINMLSSGEL 628



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 182/395 (46%), Gaps = 4/395 (1%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   + M Q R    ++ ++ L     K   Y   +++  +++S GI   +   + M
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F + +    A   + ++ + G +PDTV ++TLLN      +  EAL +   M E+  
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L T N +++         DA  L   M + G  P+ V+Y  +L V  ++     A+ 
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L R M+ + I+ + V Y+ +I    K    + A NL  EM+ +G + + ITY+T+I  + 
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
            AG+ D  A L + +    +  + V +  +I ++ + G +  A +LL E+ Q    PNTI
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I    +  R+EEA  +       G   DI  F  +I  + +  +  + +E+F +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              G   ++     ++  + +  + E A  L+ EM
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 171/352 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE         Y++++  + +    + A  LF+EM  +G   D  TY+TLI  F   G +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L+ M + ++S ++V +S LI+   K     +A  +   +   GI P+ + YN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K    +EA  +++ M  +G  PD ++++ L+N Y + ++  + L +F EM+    
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N ++  + Q    + A +LF  M    + P +VSY  LL    +     +A+ 
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  +++ ++E ++  Y  +I     + + + A +L   +  +G++ +A  Y+ +I+   
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +   L +A +LF+K+   G   D + Y  +I A+        A  L+ E++ 
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN +++   ++ + E+A  LF EM  R + PD  +Y  L+      G  + A+    ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+ ++  D+ +Y  +I      S    A  +F  L   G+  D  AYN MI+   +    
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A +L  +M E+G  PD ++Y+ L+  ++ +     A  +  EM     P D++T  ++
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 201 IDVY--GQLD 208
           I++   G+LD
Sbjct: 620 INMLSSGELD 629



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 59/131 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+++    +  Y +++  +  A + + A  LF  +  +G+  D   Y+ +I+   ++   
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    ++M ++  + D + Y+ LI       D + A  +   +KSSG   D+     +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 131 INVFGKAKLFK 141
           IN+    +L K
Sbjct: 620 INMLSSGELDK 630


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 205/413 (49%), Gaps = 39/413 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS+  +N ++  +    +   A    D +  RG  P  YT++ ++    K G   +AI
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            W+++M +     ++V YS +I+   K    ++A+ +F  ++S GI P +V YN++I   
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV------ 188
             +  +K+A +L +EM E  +KPD V++S L++   +    +EALSVF +M ++      
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349

Query: 189 -----------------------------NCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
                                        N   D+ T +I +DV+ +  M  +A  +   
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M + G+ P+VV+YN+L+  Y       EA  +F +M  K    +V++YN +IK Y KS  
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A  L  EM ++G+ PN+IT++T+I+   +AG+   A  LF+K+ S G   D + Y T
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYST 529

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVF 388
           ++  + + G +  A  L   L++    P      IL     +AG++E+A  +F
Sbjct: 530 LLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELF 582



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 193/371 (52%), Gaps = 6/371 (1%)

Query: 1   RSVAILDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           ++ A + W+ +  E    P V +Y++++ ++ + +    A  LF  MR  GI+P   TY+
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           +LI      G +  A    ++M +  +  D+V +S L++   K     +A+S+F ++   
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            + PD+V Y+++I+   K+ L+KE+  L+ EM  + ++PD V++S  ++++ +     EA
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA 403

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            S+   M E     ++ T N ++D Y       +A ++F  M   G  P V+SYN L++ 
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           Y ++E   EA  LF  M  K +  N +T+ T+I    ++     A  L ++M + G  P+
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            ITYST+++ + K G LD A  LF+ L+ S ++ + V+ + ++    + G +  AK L  
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFS 583

Query: 359 ELR----QPNT 365
            L     QP+ 
Sbjct: 584 SLSIEELQPDV 594



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 217/453 (47%), Gaps = 4/453 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S SV+   +++  +       L   +  ++ + G  P   T++TLI     EG    A+ 
Sbjct: 136 SCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAME 195

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  +        +  ++ ++    K+   S AI    ++      P++V+Y+ +I+   
Sbjct: 196 QLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLC 255

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +L  EA  L   MR  G+ P  V+Y++L+     + ++ +A  +F EM E N   D+ 
Sbjct: 256 KNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVV 315

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T +I++D   +  +  +A  +F  M ++ ++P +V+Y++L+    ++ L+ E+  L   M
Sbjct: 316 TFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM 375

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + I  +VVT++  + ++ K     +A +++  M  RG+ PN +TY++++  +    ++
Sbjct: 376 LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A  +F  + + G   D + Y  +I  Y +   +  AK+L  E+      PN+I   T 
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I+ L +AGR   A  +F++    G   D+  +  ++  F ++      + +FE ++ +  
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            P+  I  ++L    K  + E A +L+S +  E
Sbjct: 556 KPNHVICKILLGGMCKAGKLEDAKELFSSLSIE 588



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/495 (20%), Positives = 229/495 (46%), Gaps = 4/495 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F++M      P    ++ L+    +   +DS +S  ++ME   VS  +   + LI     
Sbjct: 92  FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L       S+  ++   G  P ++ +NT+IN         EA   ++ +  +G +P   +
Sbjct: 152 LHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYT 211

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++ ++N   +  K   A+    +M E++C  ++ + +I+ID   +  +  +A  LF+ MR
Sbjct: 212 HTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMR 271

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            +GI P+VV+YN+L+     +  + +A  LF+ M    ++ +VVT++ ++    K     
Sbjct: 272 SIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVL 331

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A ++  +M    +EP+ +TYS++I    K+     ++ L  ++ S  +  D V +   +
Sbjct: 332 EALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWV 391

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             + + G+V+ A+ +++ + +    PN +   + +       +++EA  VF    + G  
Sbjct: 392 DVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA 451

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +I+ + ++++     ++F++M   G  P+S     +++   +      A +L
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           + +M   GC      +  +LS +      +   +LFE L          +  ++ G   +
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571

Query: 518 ANRLNDASRIMNRMN 532
           A +L DA  + + ++
Sbjct: 572 AGKLEDAKELFSSLS 586


>gi|15219527|ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g73710
 gi|12324197|gb|AAG52063.1|AC012679_1 hypothetical protein; 49134-52109 [Arabidopsis thaliana]
 gi|332197379|gb|AEE35500.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 991

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 239/481 (49%), Gaps = 9/481 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N ++    +A +   A  LF EM + G+  D  T++T+I   G  G    A S L++ME
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +S D   Y+ L+ L     D   A+  + +++  G+ PD V +  ++++  + K+  
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           E   +I EM    ++ D  S   ++ +YV     V+A ++F E  +++C L  TT   +I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-ERFQLDCVLSSTTLAAVI 486

Query: 202 DVYGQLDMAKDADRLFWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           DVY +  +  +A+ +F+  R M G    V+ YN +++ YG+A+L  +A+ LF+ M+ +  
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +  TYN++ ++       ++A  ++ EM + G +P   TY+ +IA + + G L  A  
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLLHELR-QPNTIPRETAITILA 376
           L++ +  +GV+ + V+Y ++I  +   G+V  A    R++ E   Q N I   + I   +
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA  V+ +  D+    D++    M+ L +     +    +F  +R  G   D  
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVI 725

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNMLESLFER 495
             A ++  Y  +   + A ++  EM+E G + SD   F Q+++ Y A    +    LF  
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESG-LLSDCTSFNQVMACYAADGQLSECCELFHE 784

Query: 496 L 496
           +
Sbjct: 785 M 785



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/558 (22%), Positives = 236/558 (42%), Gaps = 47/558 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +  VL  + + K       +  EM +  I  D ++   ++  +  EG+   A + 
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF-SRLKSSGIVPDLVAYNTMINVFG 135
            ++ + D V     L + +I++  +   + +A ++F  +   SG   D++ YN MI  +G
Sbjct: 468 FERFQLDCVLSSTTL-AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KAKL ++A  L + M+ QG  PD  +Y++L  +        EA  + AEM +  C     
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   MI  Y +L +  DA  L+ +M K G+ P+ V Y +L+  + E+ +  EAI  FR+M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   ++ N +   ++IK Y K    E+A  +  +M++    P+    ++++++    G +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR------- 368
             A  +F  LR  G   D + + TM+  Y+ +G++  A  +  E+R+   +         
Sbjct: 707 SEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765

Query: 369 ---------------------------------ETAITILARAGRIEEATWVFRQAFDAG 395
                                            +T  T+L + G   EA    + A++  
Sbjct: 766 MACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN-- 823

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
           E K ++       LFS    YA  +E  +++ S G  P  H     V+ +Y    + + A
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQELTS-GEIPREHFAYNAVIYTYSASGDIDMA 882

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
              Y  MQE+G          ++ +YG       ++ +  RL        + L   V   
Sbjct: 883 LKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDA 942

Query: 515 YERANRLNDASRIMNRMN 532
           Y  ANR + A  +   M+
Sbjct: 943 YVSANRQDLADVVKKEMS 960



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/549 (22%), Positives = 229/549 (41%), Gaps = 62/549 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R + +  +      Y P+V  YN+VLR + RA +W+     + EM   G+ P   TY  L
Sbjct: 127 RVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGML 186

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  +GK G+   A+ W++ M Q     D V  + ++ + +   ++ +A   F    +  +
Sbjct: 187 VDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKV 246

Query: 121 VPDLVAYN---------TMINV--FGKAKLFK-EARLLIEEMREQGVKPD--------TV 160
             DL + +         + +N+  F   +LFK  AR  IE+        D        T 
Sbjct: 247 DLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTS 306

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++TL++LY +  +  +A ++F+EM +   P+D  T N MI   G      +A+ L   M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK---- 276
            + GI P   +YN LL ++ +A     A+  +R +++  +  + VT+  ++ I  +    
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426

Query: 277 ---------------SLEHEKATNLMQEMQNRGIEPNA---------------ITYSTII 306
                           ++      +MQ   N G+   A                T + +I
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486

Query: 307 AIWGKAGKLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
            ++ + G    A  +F   R+ SG   D + Y  MI AY +  L   A  L   ++   T
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546

Query: 366 IPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P E        +LA    ++EA  +  +  D+G       +  MI  + R    ++ ++
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           ++E M   G  P+  +   ++N + +    E A   +  M+E G V S+  H  + SL  
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG-VQSN--HIVLTSLIK 663

Query: 482 ARKDFNMLE 490
           A      LE
Sbjct: 664 AYSKVGCLE 672


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/530 (23%), Positives = 245/530 (46%), Gaps = 15/530 (2%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F  + VL    R      A   F E++  G  P   TY+ L+  FGK G++  A+S L++
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME++    D V Y+ L+    +     +A  +   +   G++P+ + Y T+I+ +GKA  
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA  L   M+E G  P+T +Y+ +L+L  +  +  E + +  +M    C  +  T N 
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           M+ + G   M K  +R+F  M+  G +P   ++NTL+  YG      +A  ++  M R  
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
               V TYN ++    +  +     N++ +M+++G +P   +YS ++  + K G      
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
            +  +++   +    +L +T+++A  +   +A ++R     +    +P+ +   + ++I 
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            R    ++A  +     + G   D+  +  +++++ R  +     E+ + +  +   PD 
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNMLESL 492
                V+  + +    + A  + SEM E G   C+F+   +   +S Y A   F  +E +
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT---YNTFVSGYTAMGMFAEIEDV 758

Query: 493 FERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
            E +  +D   N+     VV G Y RA + ++A   M+ ++K +TF+   
Sbjct: 759 IECMAKNDCRPNELTFKMVVDG-YCRAGKYSEA---MDFVSKIKTFDPCF 804



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 231/545 (42%), Gaps = 46/545 (8%)

Query: 34  QWELAHGLFDEM----RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
            WE A  LF+ +        +  D       +   G+E  +  A   L ++       D+
Sbjct: 151 HWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDV 210

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK------------- 136
             Y+ ++    +   Y KAI +F R+K  G  P LV YN +++VFGK             
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270

Query: 137 -----------------------AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
                                    L +EA+    E++  G +P TV+Y+ LL ++ +  
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
            + EALSV  EM E +CP D  T N ++  Y +   +K+A  +   M K G+ P+ ++Y 
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           T++  YG+A    EA+ LF  M+      N  TYN ++ + GK     +   ++ +M++ 
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  PN  T++T++A+ G  G       +F++++S G E D   + T+I AY R G    A
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510

Query: 354 KRLLHELRQPN----TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
            ++  E+ +             +  LAR G       V       G     + +  M++ 
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           +++   Y  +  +  +++    FP   ++  +L +  K R    ++  ++  ++ G    
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG-YKP 629

Query: 470 DQVHF-QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           D V F  MLS++     ++  E + E +  D        ++ +  +Y R      A  I+
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689

Query: 529 NRMNK 533
             + K
Sbjct: 690 KTLEK 694



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 215/506 (42%), Gaps = 44/506 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L+   +A  +  A  +  EM +     D  TY+ L+  + + G    A 
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             ++ M +  V  + + Y+ +I+   K     +A+ +F  +K +G VP+   YN ++++ 
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVNCPL 192
           GK     E   ++ +M+  G  P+  +++T+L L       KFV    VF EM       
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN--RVFREMKSCGFEP 489

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N +I  YG+     DA +++  M + G +  V +YN LL        +    ++ 
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKS---LEHEKATNLMQEMQ------------------ 291
             M+ K  +    +Y+ M++ Y K    L  E+  N ++E Q                  
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609

Query: 292 --------------NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                           G +P+ + ++++++I+ +    D+A  + + +R  G+  D V Y
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            +++  Y R G    A+ +L  L     +P+ +   T I    R G ++EA  +  +  +
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G    I  +   +  ++    +A + +V E M      P+     +V++ Y +  ++  
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSL 479
           A D  S+++     F DQ   Q L+L
Sbjct: 790 AMDFVSKIKTFDPCFDDQ-SIQRLAL 814



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 213/469 (45%), Gaps = 13/469 (2%)

Query: 83  DRVSGDLVLYSNLIELARKLSD---YSKAISIFSRL----KSSGIVPDLVAYNTMINVFG 135
           D V  +L L ++L+ L + L D   + +A+ +F  L     S  +  D       + + G
Sbjct: 128 DSVKSEL-LRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILG 186

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   +  A  L++++  Q    D  +Y+T+L+ Y    K+ +A+ +F  M E+     L 
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246

Query: 196 TCNIMIDVYGQLDMA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T N+++DV+G++  + +    +   MR  G+     + +T+L       L  EA   F  
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++    E   VTYN +++++GK+  + +A ++++EM+      +++TY+ ++A + +AG 
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
              AA + + +   GV  + + Y T+I AY + G    A +L + +++    PNT     
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +++L +  R  E   +       G   + + +  M+ L         V  VF +M+S G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + PD      ++++YG+      A  +Y EM   G       +  +L+    + D+   E
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
           ++   + S      +  + ++   Y +        RI NR+ + + F S
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 140/280 (50%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A ++  V  YN +L  + R   W     +  +M+ +G  P   +YS ++ C+ K G +  
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                 ++++ ++    +L   L+    K    + +   F+  K  G  PD+V +N+M++
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +F +  ++ +A  ++E +RE G+ PD V+Y++L+++YV   +  +A  +   + +     
Sbjct: 640 IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           DL + N +I  + +  + ++A R+   M + GI P + +YNT +  Y    +F E   + 
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
             M + +   N +T+  ++  Y ++ ++ +A + + +++ 
Sbjct: 760 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 101/194 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E +  PS      +L    + +    +   F   ++ G  PD   ++++++ F +  M+
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L+ + +D +S DLV Y++L+++  +  +  KA  I   L+ S + PDLV+YNT+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F +  L +EA  ++ EM E+G++P   +Y+T ++ Y     F E   V   M + +C
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767

Query: 191 PLDLTTCNIMIDVY 204
             +  T  +++D Y
Sbjct: 768 RPNELTFKMVVDGY 781



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 56/107 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+++  P + +YN V++   R    + A  +  EM +RGI P  +TY+T ++ +   GMF
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
                 ++ M ++    + + +  +++   +   YS+A+   S++K+
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 215/450 (47%), Gaps = 5/450 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            +N V+  + +    + A  +F EM+  GI PD Y+YS LI  F ++G  D A    ++M
Sbjct: 282 CFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +  ++  YS LI+   K     KA+ +F  +K+SGI+PD+ +Y+ +I+ F +    
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A    EEM      P   +Y +L+  Y ++ +F  AL  F  M ++    D   CN +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           + +Y +      A  L    ++ G+  +  SYN  +       +  +A+ L  +M ++ +
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VV Y+T+I  + K L  EKA  L  +M   GI  N  TY+ +I ++    K+D A  
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILA 376
           LF+ ++ S V  D + Y +++  +   G +  A+ L  E+ +    PN +     I    
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF-PDS 435
           +  +  +A  ++ +  + G   D  ++  +I  F    +      +F++M+  G   P+ 
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNV 701

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +   ++NSY KL + + A+ LY EM+ +G
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 213/455 (46%), Gaps = 6/455 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y   ++ + +   + +A  L   + ++    + + ++ +I    + G+ D A  
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 301

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M+   +  D+  YS LI+   +     +A  +F  +++SGI+P++ +Y+ +I+ F 
Sbjct: 302 VFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFC 361

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDL 194
           K     +A  + EEM+  G+ PD  SYS L++ +        A+  + EM   N  P   
Sbjct: 362 KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF 421

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             C+++   Y     A +A + F  M+K+G+ P  ++ N +L +Y     F +A+ L   
Sbjct: 422 NYCSLIKGYYKSKQFA-NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEK 480

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            Q   +  N  +YN  I    +    EKA  L+  M  R + P+ + YST+I+ + K   
Sbjct: 481 FQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLN 540

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            ++A MLF K+   G+  +   Y  +I  +     +  A RL   +++    P + A T 
Sbjct: 541 SEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTS 600

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L       G +  A  +F +    G   ++  + C I  + +  K     +++EKM+  G
Sbjct: 601 LVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERG 660

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +PD  +  +++ ++    E   A+ L+ EM++EG
Sbjct: 661 VYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 204/419 (48%), Gaps = 5/419 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V++Y++++    R  + + A  +F EMR  GI P+ Y+YS LI  F KEG  D A+  
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M+   +  D+  YS LI+   +  D   AI  +  + S+   P    Y ++I  + K
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +K F  A      M++ G+ PDT++ + +L++Y     F +AL++  +  E     +  +
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  I    +  + + A +L   M K  + P VV+Y+TL+  + +     +A+ LF  M 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  I  NV TY  +I ++    + + A  L + M+   + P+ I Y++++A +   G++ 
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           RA  LF ++   G   + V Y   I  Y ++     A +L  ++++    P +   T+L 
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672

Query: 377 RA----GRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            A    G +  A  +F +    G    ++ ++ C+I  + +  K     +++E+MR+ G
Sbjct: 673 AAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 171/348 (49%), Gaps = 36/348 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SPS F Y  +++   ++KQ+  A   F  M++ G+ PD    + +++ + ++  F+ A+
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +  ++ +++ V  +   Y+  I    + S   KA+ +   +    ++PD+V Y+T+I+ F
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K    ++A +L  +M + G+  +  +Y+ L+NL++                  +C +D+
Sbjct: 536 AKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS-----------------DCKMDV 578

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                             A RLF  M++  + P  ++Y +L+  +        A  LF  
Sbjct: 579 ------------------AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R+    NVVTY   I  Y K  ++ +A  L ++M+ RG+ P+ I Y+ +IA +   G+
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGE 680

Query: 315 LDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++RA  LF +++  G    + V+Y  +I +Y ++     A++L  E+R
Sbjct: 681 MNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 7/310 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   A N +L    R   +  A  L ++ ++ G+  + Y+Y+  I    +  + + A+  
Sbjct: 453 PDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQL 512

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  V  D+V YS LI    K  +  KA+ +F ++   GI  ++  Y  +IN+F  
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS 572

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L + M+E  V PD ++Y++L+  +    +   A ++F EM+   C  ++ T
Sbjct: 573 DCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM- 255
               I+ Y +L+    A +L+  M++ G+ P  + Y  L+  +        A  LF  M 
Sbjct: 633 YTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMK 692

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG----- 310
           Q      NVV Y  +I  Y K  + ++A  L +EM+ +G+     +  ++   W      
Sbjct: 693 QEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQV 752

Query: 311 -KAGKLDRAA 319
            K GKL   A
Sbjct: 753 LKTGKLGGRA 762



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 177/400 (44%), Gaps = 26/400 (6%)

Query: 126 AYNTMINVFGKAKLFKEARLLI--------EEMREQG--------VKPDTVSYSTLLNLY 169
           +++ +I+ +  A +  E  +LI        EE R+ G        V+   V +  L+ ++
Sbjct: 87  SFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGELVSLLLDVEKSNVVFDMLIKVF 146

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
             N     A  VF    +    L++ +CN ++    + +       LF  + K G  P++
Sbjct: 147 ASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNI 206

Query: 230 VSY----NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            +Y    N   R  G +     A  +   +       NVVTY T IK   K      A  
Sbjct: 207 HTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWR 266

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+Q +  +    N   ++ +I    + G LD A+ +F+++++SG+  D   Y  +I  + 
Sbjct: 267 LIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFC 326

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS 401
           R G V  A  +  E+R    +P   + +IL     + GR+++A  VF +  ++G + D+ 
Sbjct: 327 RKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVY 386

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I+ F R     + I+ +E+M S  + P +     ++  Y K ++F  A   +  M
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 462 QEEGCVFSDQVHF-QMLSLYGARKDFNMLESLFERLDSDS 500
           Q+ G ++ D +    +LS+Y  + DFN   +L E+   + 
Sbjct: 447 QKLG-MWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 485



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 172/392 (43%), Gaps = 8/392 (2%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVF----GKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +F  L   G  P++  Y  M+N F    G +   + A  ++ ++   G  P+ V+Y T +
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 252

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
               +   F  A  +   +   N PL+    N +I    Q  +  +A  +F  M+  GI 
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P V SY+ L+  +       +A  +F+ M+   I  N+ +Y+ +I  + K    +KA  +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            +EM+N GI P+  +YS +I  + + G +D A   ++++ S+        Y ++I  Y +
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 347 VGLVAHAK---RLLHELRQ-PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
               A+A    R++ +L   P+TI     ++I  R     +A  +  +  + G   +   
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +   I    R       +++   M      PD    + +++ + K    E A  L+ +M 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
           + G  F+ + +  +++L+ +    ++   LF+
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFK 584



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           + ++ S V ++ L++V+    +   A ++F   +   IE N+++ N ++K   +    + 
Sbjct: 130 LDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDG 189

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIW----GKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              L + +   G  PN  TY+ ++  +    G +  + RA+ +  K+  SG   + V Y 
Sbjct: 190 VRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYG 249

Query: 339 TMIVAYERVGLVAHAKRLLHEL---RQP-NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           T I    +VGL   A RL+  L    QP N       I  L + G ++EA+ VF++  ++
Sbjct: 250 TYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNS 309

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D+  +  +I+ F R  +     EVF++MR++G  P+ +  +++++ + K    + A
Sbjct: 310 GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKA 369

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARK-DFNMLESLFERLDSDSNINKKELHH--VV 511
            +++ EM+  G +  D   + +L     RK D +     +E + S+ N +    ++  ++
Sbjct: 370 LEVFEEMKNSG-ILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSN-NFSPSAFNYCSLI 427

Query: 512 AGIYER---ANRLNDASRIMNRM 531
            G Y+    AN L +  RIM ++
Sbjct: 428 KGYYKSKQFANALKEF-RIMQKL 449



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E+R  P   AY  ++       +   A  LFDEM + G +P+  TY+  I  + K    
Sbjct: 587 KESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKN 646

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNT 129
           + A    ++M++  V  D +LY+ LI       + ++A ++F  +K  G   P++V Y  
Sbjct: 647 NQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTC 706

Query: 130 MINVFGKAKLFKEARLLIEEMREQGV 155
           +IN + K     +A  L EEMR +G+
Sbjct: 707 LINSYIKLNKRDQAEKLYEEMRAKGL 732


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 218/453 (48%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV++    RA   E A  L D M  +G+ P   TY++++    + GM+D A   
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M+   V+ D+  ++ LI    ++ +  +A+ I+  ++  GI PDLV+++ +I +F +
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EMR  G+ PD V Y+ ++  +       +AL V  EM    C  D+ T
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +     DA+ L   MR+ G+ P + ++ TL+  Y       +A+ LF  M 
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  ++VTYNT+I    +  + +KA +L  +M +R I PN +TYS +I    + G+++
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A     ++ + G+  + + Y ++I  Y R G V+  ++ L ++      P+ I   T I
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  ++ +A  +           D+  +  +I  FS +        +FEKM + G  
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           PD +    ++N +      + A  L+ EM + G
Sbjct: 548 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 10/390 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V ++ +++    R  + E A  ++ EMR RGI PD  ++S LI  F + G  D A++
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    +  D V+Y+ +I    +    S A+ +   +   G +PD+V YNT++N   
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 316

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L+ EMRE+GV PD  +++TL++ Y    K  +AL +F  M       D+ 
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 376

Query: 196 TCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T N +ID     G LD A D   L+  M    I P+ V+Y+ L+  + E     +A    
Sbjct: 377 TYNTLIDGMCRQGDLDKAND---LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 433

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K I  N++TYN++IK Y +S    K    +Q+M    + P+ ITY+T+I  + K 
Sbjct: 434 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETA 371
            K+  A  L   +    V+ D V Y  +I  +   G V  A  +  ++      P R T 
Sbjct: 494 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553

Query: 372 ITIL---ARAGRIEEATWVFRQAFDAGEVK 398
           ++++     AG  +EA  +  +    G+ K
Sbjct: 554 MSMINGHVTAGNSKEAFQLHDEMLQRGKEK 583



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 230/497 (46%), Gaps = 24/497 (4%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           YT + ++  + K   FD   + + +ME+  V  D+V ++ +++   +  D   A+++   
Sbjct: 96  YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           + S G+ P +V YN+++    ++ ++ +A  + +EM + GV PD  S++ L+  +    +
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             EAL ++ EM       DL + + +I ++ +      A      MR  G+ P  V Y  
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++  +  A L  +A+ +   M       +VVTYNT++    K      A  L+ EM+ RG
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+  T++T+I  +   GKLD+A  LF  + +  +  D V Y T+I    R G +  A 
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L  ++      P     +IL       G++E+A     +  + G + +I  +  +I+ +
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R+   +   +  +KM      PD      +++ Y K  +   A  L + M++E  V  D
Sbjct: 456 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK-VQPD 514

Query: 471 QVHFQMLSLYGARKDFNMLES--LFERLDSD----------SNINKKELHHVVAGIYERA 518
            V + ML + G     N+ E+  +FE++ +           S IN     HV AG  + A
Sbjct: 515 VVTYNML-INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING----HVTAGNSKEA 569

Query: 519 NRLNDASRIMNRMNKRR 535
            +L+D   ++ R  ++R
Sbjct: 570 FQLHD--EMLQRGKEKR 584



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 6/248 (2%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A   +RL+     E N  T N M+  Y K+LE +K   ++ EM+ R + P+ +T++ ++ 
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              +AG  + A  L   + S G++   V Y +++    R G+   A  +  E+      P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 368 RETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
              + TIL     R G IEEA  ++++    G   D+  F C+I LF+R  K  + +   
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            +MR  G  PD  I  +V+  + +      A  +  EM   GC+  D V +  L L G  
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYNTL-LNGLC 316

Query: 484 KDFNMLES 491
           K+  +L++
Sbjct: 317 KERRLLDA 324



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 106/211 (50%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P +  YN ++  + R    + A+ L+D+M  R I P+  TYS LI    ++G  + A
Sbjct: 370 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +L +M    +  +++ Y+++I+   +  + SK      ++  + + PDL+ YNT+I+ 
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K     +A  L+  M ++ V+PD V+Y+ L+N +  +    EA  +F +M       D
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 549

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
             T   MI+ +     +K+A +L   M + G
Sbjct: 550 RYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI----TCFGK 66
           E+ +  P V  YN+++         + A  +F++M  +GI PDRYTY ++I    T    
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKL 102
           +  F      LQ+ ++ R +   V + N+   A  L
Sbjct: 567 KEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESL 602


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 215/449 (47%), Gaps = 6/449 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A   P+V   N+++  + +A++ E A  +F+ M  +   P+  T+S+LI   GK G  
Sbjct: 431 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 490

Query: 71  DSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A S  ++M +   V G +V Y++LI    K         I+  +  +G  PDL   NT
Sbjct: 491 DDAYSLYEKMLDCGHVPGAIV-YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            ++   KA   ++ R L  E+   G  PD  SYS L++  V+     E   +F  M E  
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C LD    N +ID + +      A +L   M+  G  P+VV+Y +++    + +   EA 
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF   +   I+ NVV Y+++I  +GK    ++A  +M+E+  +G+ PN  T++ ++   
Sbjct: 670 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            KA +++ A + FQ ++      + + Y  +I    RV     A     E+++    PNT
Sbjct: 730 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 789

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   T I+ LA+AG I EA+ +F +    G + D + +  MIE  S   K  +   +FE+
Sbjct: 790 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETA 454
            R  G    +    ++L++  K    E A
Sbjct: 850 TRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 225/475 (47%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y  +V  +  ++R   R  + + A  L DEM+   +  D   Y+  I CFGK G  
Sbjct: 222 QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKV 281

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D +  +  +M+   +  D V Y+++I +  K +   +A+ +F +L+ +  VP   AYNTM
Sbjct: 282 DMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTM 341

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  + +G  P  ++Y+ +L    +  +  EAL +F EM     
Sbjct: 342 IMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV 401

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P ++ T NI+ID+  +      A  +   M + G+ P+V++ N ++    +A+   EA  
Sbjct: 402 P-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M  K    N VT++++I   GK    + A +L ++M + G  P AI Y+++I  + 
Sbjct: 461 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 520

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+ +    +++++  +G   D  L  T +    + G     + L  E+     IP   
Sbjct: 521 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 580

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + +I    L +AG   E   +F    + G V D   +  +I+ F ++ K     ++ E+M
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 640

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +  G+ P       V++   K+   + A  L+ E +  G   +  V+  ++  +G
Sbjct: 641 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 219/456 (48%), Gaps = 5/456 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY +++  +   ++ +    LF +M++ G   + + ++TLI  F +EG  D+A
Sbjct: 190 KFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAA 249

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +S L +M+ + +  D+VLY+  I+   K      +   F  +KS G++PD V Y +MI V
Sbjct: 250 LSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGV 309

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  L E++ +    P   +Y+T++  Y    KF EA  +            
Sbjct: 310 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 369

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N ++   G+    ++A R+F  M++  + P+V +YN L+ +         A+ +  
Sbjct: 370 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 428

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+R  +  NV+T N MI    K+ + E+A ++ + M ++   PNA+T+S++I   GK G
Sbjct: 429 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 488

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++D A  L++K+   G     ++Y ++I ++ + G      ++  E+      P  T I 
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548

Query: 374 ----ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                + +AG  E+   +FR+    G + D   +  +I    +        E+F  M+  
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D+H    V++ + K  +   A  L  EM+ +G
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 237/510 (46%), Gaps = 36/510 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV AYN +L  + + ++ E A  +F+EM+ R   P+  TY+ LI    +EG  ++A+  
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEI 426

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME+  +  +++  + +I+   K     +A SIF  +      P+ V ++++I+  GK
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  L E+M + G  P  + Y++L+  + +  +  +   ++ EM    C  DLT 
Sbjct: 487 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 546

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  +D   +    +    LF  +   G  P   SY+ L+    +A L  E   LF  M+
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +    +   YN +I  + KS +  KA  L++EM+ +G  P  +TY ++I    K  +LD
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A MLF++ +S+G++++ V+Y ++I  + +VG                            
Sbjct: 667 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG---------------------------- 698

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
              RI+EA  +  +    G   ++  + C+++   + ++    +  F+ M+     P+  
Sbjct: 699 ---RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFE 494
             ++++N   ++R+F  A   + EMQ+ G   +   +  M+S  G  K  N+LE+  LF 
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS--GLAKAGNILEASGLFS 813

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDA 524
           R  ++  I     ++ +      AN+  DA
Sbjct: 814 RFKANGGIPDSASYNAMIEGLSSANKAMDA 843



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 206/453 (45%), Gaps = 12/453 (2%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           G+  L   +I + ++L D + A++ F    K +  V    AYN+++ V  +   F     
Sbjct: 87  GEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLER 146

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           ++EEM   G  P +     L+   V++ K  EA  +   M +       +   I+I   G
Sbjct: 147 ILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI---G 203

Query: 206 QLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            L   ++ D    LF  M+++G + +V  + TL+RV+        A+ L   M+   ++ 
Sbjct: 204 ALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDA 263

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           ++V YN  I  +GK+ + + +     EM++ G+ P+ +TY+++I +  KA +LD A  LF
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELF 323

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARA 378
           ++L  +        Y TMI+ Y   G    A  LL   +   +IP   A    +T L + 
Sbjct: 324 EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKK 383

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
            R+EEA  +F +      V ++  +  +I++  R  K    +E+ + M  AG FP+   +
Sbjct: 384 RRVEEALRIFEE-MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            ++++   K ++ E A  ++  M ++ C  +      ++   G     +   SL+E++  
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD 502

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             ++    ++  +   + +  R  D  +I   M
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 190/421 (45%), Gaps = 17/421 (4%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQME------QDRVSGDLVLYSNLIELARKLSDYSKAI 109
            Y++L+    +   FD     L++M          +S +LV  +N ++ +RKL +   A 
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELV--ANCVK-SRKLRE---AF 180

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            I   ++     P   AY  +I    + +      +L  +M+E G + +   ++TL+ ++
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
               +   ALS+  EM   +   D+   N+ ID +G+      + + F  M+  G+ P  
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y +++ V  +A    EA+ LF  +++         YNTMI  YG + + ++A  L++ 
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            + +G  P+ I Y+ I+   GK  +++ A  +F++++   V   P  Y  +I    R G 
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPT-YNILIDMLCREGK 419

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +  A  +  ++ +    PN +     I  L +A ++EEA  +F    D     +   F  
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I+   +  +  +   ++EKM   G+ P + +   ++ S+ K    E    +Y EM   G
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539

Query: 466 C 466
           C
Sbjct: 540 C 540



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/523 (21%), Positives = 225/523 (43%), Gaps = 44/523 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS      ++ N +++++   A  +   MR+    P    Y+ LI    +    D  +
Sbjct: 156 FGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPML 215

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               QM++     ++ L++ LI +  +      A+S+   +KS+ +  D+V YN  I+ F
Sbjct: 216 ILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCF 275

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GKA     +     EM+  G+ PD V+Y++++ +  + ++  EA+ +F ++ +       
Sbjct: 276 GKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ------- 328

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                                     RK+   P   +YNT++  YG A  F EA  L   
Sbjct: 329 -------------------------NRKV---PCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            + K    +V+ YN ++   GK    E+A  + +EM+   + PN  TY+ +I +  + GK
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGK 419

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNTIPRET 370
           L+ A  +   +  +G+  + +    MI    +   +  A  +      ++  PN +   +
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR+++A  ++ +  D G V    V+  +I  F +  +  +  +++++M   G
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNM 488
             PD  +I   ++   K  E E    L+ E+   G    D   + +L ++G  K    N 
Sbjct: 540 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHG-FIPDARSYSIL-IHGLVKAGLANE 597

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              LF  +     +     ++ V   + ++ ++N A +++  M
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 640



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 162/314 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y++++  +++A      + LF  M+++G   D + Y+ +I  F K G  + A 
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+       +V Y ++I+   K+    +A  +F   KS+GI  ++V Y+++I+ F
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 694

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EE+ ++G+ P+  +++ LL+  V+  +  EAL  F  M ++ CP + 
Sbjct: 695 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 754

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K+G+ P+ ++Y T++    +A    EA  LF  
Sbjct: 755 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 814

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  +YN MI+    + +   A  L +E + +G   +  T   ++    KA  
Sbjct: 815 FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAEC 874

Query: 315 LDRAAMLFQKLRSS 328
           L++AA++   L+ +
Sbjct: 875 LEQAAIVGAVLKET 888



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 41/343 (11%)

Query: 203 VYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           V G L   KDA+       W+ ++        +YN+LL V      F    HL R+++  
Sbjct: 95  VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFD---HLERILEEM 151

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEK---ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +     + N  I++    ++  K   A +++Q M+     P    Y+ +I    +  + 
Sbjct: 152 SLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREP 211

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D   +LF +++  G E++  L+ T+I  + R G V  A  LL E++              
Sbjct: 212 DPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKS------------- 258

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
                          + DA    DI ++   I+ F +  K     + F +M+S G  PD 
Sbjct: 259 --------------NSLDA----DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                ++    K    + A +L+ ++++   V     +  M+  YG+   F+    L ER
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFN 538
             +  +I     ++ +     +  R+ +A RI   M +    N
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPN 403


>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
          Length = 583

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 6/390 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E R  P    YN ++    RA QW  A  + ++M +  I P R TY+ +I   G  G +
Sbjct: 38  QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   ++M ++ V  DLV ++ ++   +  + YSKAIS F  +K + +  D    N +
Sbjct: 98  KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK--PDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           I+   K     EA  L   MRE+  K  PD V+Y+++++ Y    +     ++F  M   
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++   N ++  Y    M ++A  +F  ++K G+ P +VSY +LL  YG +    +A
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M++   + N V+YN +I  YG +   ++A  L+ EM+  GI+P+ ++ ST++A 
Sbjct: 278 REVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA 337

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            G+  ++ R   + +  RS G++++ V Y + I +Y   G    A  L   +R+ N  P 
Sbjct: 338 CGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397

Query: 369 ETAITIL----ARAGRIEEATWVFRQAFDA 394
                IL    ++ G+  E+   F    D+
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDS 427



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 198/411 (48%), Gaps = 6/411 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y +++R   R  Q + A GLF EM++    PD   Y++LI    + G +  AI+ ++ M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +      Y+N+I       ++ KA+ +  ++  +G+ PDLV +N +++       + 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCNI 199
           +A    E M+   V  DT + + +++  V+  +  EA+ +F  M E    CP D+ T   
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  Y      ++   +F  M   G+ P++V+YN+LL  Y    +  EA+ +F L+++  
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  ++V+Y +++  YG+S + EKA  +  +M+    +PN ++Y+ +I  +G AG L  A 
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITIL 375
            L  ++   G++ D V   T++ A  R   +   + +L   R      NT+   + I   
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              G  E+A  ++    ++    D   +  +I   S+  KY   +  FE M
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 227/476 (47%), Gaps = 24/476 (5%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y  +I  + +    D A     +M++ R   D  +Y++LI    +   +  AI+I   + 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            + I P    YN +IN  G A  +K+A  L ++M E GV PD V+++ +L+      ++ 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM--RKMGIDPSVVSYNT 234
           +A+S F  M   N   D  T NI+I    ++    +A  LF SM  R+    P VV+Y +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193

Query: 235 LLR---VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           ++    +YG+ E       +F LM  + ++ N+V YN+++  Y     H +A  +   ++
Sbjct: 194 IMHSYCIYGQVE---NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             G+ P+ ++Y++++  +G++ + ++A  +F K++ +  + + V Y  +I AY   G++ 
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310

Query: 352 HAKRLLHELRQPNTIPRETAI-TILARAGRIEEAT---WVFRQAFDAGEVKDISVFGCMI 407
            A  LLHE+ +    P   +I T+LA  GR  + T    +   A   G   +   +   I
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGI 370

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + +     Y   +E++  MR +   PD+    ++++   KL ++  +   + +M +    
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430

Query: 468 FSDQVHFQMLSLY---------GAR--KDFNMLESLFERLDSD-SNINKKELHHVV 511
            + +  + +  L          G++  +D+     + E LDS  S+I+   L+HV+
Sbjct: 431 STKEFLWTIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLNHVL 486



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 21/466 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +N+VL  +    Q+  A   F+ M+   +  D +T + +I C  K G    AI 
Sbjct: 113 GPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIE 172

Query: 76  WLQQMEQDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               M + R     D+V Y++++             +IF  + + G+ P++VAYN+++  
Sbjct: 173 LFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGA 232

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +    + +EA  +   +++ G++PD VSY++LLN Y  + +  +A  VF +M + +C  +
Sbjct: 233 YASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPN 292

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             + N +ID YG   M K+A  L   M K GI P VVS +TLL   G          +  
Sbjct: 293 KVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILE 352

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             + + I+ N V YN+ IK Y    ++EKA  L   M+   ++P+A+TY+ +I+   K G
Sbjct: 353 AARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLG 412

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH-----------AKRLLHELRQ 362
           K   +   F+ +  S V        T+    E +G V             A  ++  L  
Sbjct: 413 KYTESLRFFEDMVDSKVSSTKEFLWTIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDS 472

Query: 363 P-NTIPRET---AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
             ++I   T    +  L + G+ E    +F +   +     +S +  ++       K+  
Sbjct: 473 SLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRK 532

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            IEV + M  +G  P  ++   VL    +    E   D  + MQE+
Sbjct: 533 YIEVLQWMEDSGVHPTLYMFQNVLPYIWR----ENGMDFAATMQEK 574


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 185/379 (48%), Gaps = 13/379 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V A   ++R   R+ + + A  + + +   G  PD  TY+ LI  + K G  D A+  
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L++M    V+ D+V Y+ ++   R L D  K   A+ +  R       PD++ Y  +I  
Sbjct: 199 LERMS---VAPDVVTYNTIL---RSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEA 252

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                   +A  L++EMR++G KPD V+Y+ L+N   +  +  EA+     M    C  +
Sbjct: 253 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA+RL   M + G  PSVV++N L+       L G AI +  
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +     N ++YN ++  + +  + ++A   ++ M +RG  P+ +TY+T++    K G
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K+D A  +  +L S G     + Y T+I    +VG   +A  LL E+R    +P+ I   
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 370 TAITILARAGRIEEATWVF 388
           T +  L R G+++EA  +F
Sbjct: 493 TLLRGLGREGKVDEAIKIF 511



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I E +   P V  YNV++    ++ + + A  + + M    +APD  TY+T++      G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSG 222

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+  L +  Q     D++ Y+ LIE     S   +A+ +   ++  G  PD+V YN
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +IN   K     EA   +  M   G KP+ ++++ +L       ++++A  + ++M   
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C   + T NI+I+   +  +   A  +   M K G  P+ +SYN LL  + + +    A
Sbjct: 343 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRA 402

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           I    +M  +    ++VTYNT++    K  + + A  ++ ++ ++G  P  ITY+T+I  
Sbjct: 403 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDG 462

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             K GK + A  L +++R  G++ D + Y T++    R G V  A ++ H++   +  P 
Sbjct: 463 LTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP- 521

Query: 369 ETAIT 373
            +A+T
Sbjct: 522 -SAVT 525



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 198/443 (44%), Gaps = 34/443 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           FA N+ LR ++R  + E      + M  +G  PD    ++LI  F + G    A   ++ 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +E      D++ Y+ LI    K  +  KA+ +  R+    + PD+V YNT++     +  
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGK 223

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            KEA  +++   ++   PD ++Y+ L+     +    +A+ +  EM +  C  D+ T N+
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I+   +     +A +   +M   G  P+V+++N +LR       + +A  L   M RK 
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +VVT+N +I    +     +A +++++M   G  PN+++Y+ ++  + +  K+DRA 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
              + + S G   D V Y T++ A                               L + G
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTA-------------------------------LCKDG 432

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +++ A  +  Q    G    +  +  +I+  ++  K    +E+ E+MR  G  PD    +
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 440 LVLNSYGKLREFETADDLYSEMQ 462
            +L   G+  + + A  ++ +M+
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDME 515



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 152/325 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++           A  L DEMR++G  PD  TY+ LI    KEG  D AI +
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 300

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M       +++ ++ ++        +  A  + S +   G  P +V +N +IN   +
Sbjct: 301 LNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCR 360

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +L   A  ++E+M + G  P+++SY+ LL+ + +  K   A+     M    C  D+ T
Sbjct: 361 KRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 420

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +      A  +   +   G  P +++YNT++    +      A+ L   M+
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK ++ +++TY+T+++  G+  + ++A  +  +M+   I+P+A+TY+ I+    KA +  
Sbjct: 481 RKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 540

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI 341
           RA      +   G +     Y  +I
Sbjct: 541 RAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 164/374 (43%), Gaps = 45/374 (12%)

Query: 100 RKL---SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           RKL    +  + +    R+   G +PD++A  ++I  F ++   K+A  ++E +   G  
Sbjct: 114 RKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAV 173

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD ++Y+ L+  Y ++ +  +AL V                                   
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEV----------------------------------- 198

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              + +M + P VV+YNT+LR   ++    EA+ +     ++E   +V+TY  +I+    
Sbjct: 199 ---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                +A  L+ EM+ +G +P+ +TY+ +I    K G+LD A      + S G + + + 
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315

Query: 337 YQTMIVAYERVGLVAHAKRLLHE-LRQ---PNTIPRETAITILARAGRIEEATWVFRQAF 392
           +  ++ +    G    A+RLL + LR+   P+ +     I  L R   +  A  V  +  
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G V +   +  ++  F + KK    IE  E M S G +PD      +L +  K  + +
Sbjct: 376 KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435

Query: 453 TADDLYSEMQEEGC 466
            A ++ +++  +GC
Sbjct: 436 AAVEILNQLSSKGC 449



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 139/338 (41%), Gaps = 35/338 (10%)

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            +E    +E M  QG  PD ++ ++L+  +  + K  +A  +   +       D+ T N+
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I  Y +   + + D+    + +M + P VV+YNT+LR   ++    EA+ +     ++E
Sbjct: 182 LIGGYCK---SGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +V+TY  +I+         +A  L+ EM+ +G +P+ +TY+ +I    K G+LD A 
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
                + S G                                +PN I     +  +   G
Sbjct: 299 KFLNNMPSYGC-------------------------------KPNVITHNIILRSMCSTG 327

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           R  +A  +       G    +  F  +I    R +     I+V EKM   G  P+S    
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            +L+ + + ++ + A +    M   GC + D V +  L
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGC-YPDIVTYNTL 424



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 243 ELFGEAIHLFRLMQRKEIEQ---------------NVVTYNTMIKIYGKSLEHEKATNLM 287
           E F   IHL +L++  E+E+               +V+   ++I+ + +S + +KAT +M
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           + ++N G  P+ ITY+ +I  + K+G++D+A  + +++    V  D V Y T++ +    
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDS 221

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVF 403
           G +  A  +L    Q    P     TIL  A      + +A  +  +    G   D+  +
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I    +  +    I+    M S G  P+     ++L S      +  A+ L S+M  
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341

Query: 464 EGCVFSDQVHFQMLSLYGARK 484
           +GC  S  V F +L  +  RK
Sbjct: 342 KGCSPS-VVTFNILINFLCRK 361


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 44/494 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PS   Y  +++ +  A  ++L  GL  EMR+ G         + +  + +   FD A+
Sbjct: 85  FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144

Query: 75  SW-LQQMEQDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              L Q++ D   V  D V++++L+ +  + S      S+++ +   GI PD+V  NT+I
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A   + A L++EEM   GV PD  +++TL+  ++E      AL V A+M E  C 
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T N++I+ Y ++   +DA          G +P  V+YNT +    +      A+ +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM ++  + +V TYNT+I    K+ E ++A  ++ +M +RG  P+  T++T+I     
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384

Query: 312 AGKLDRA-----------------------------------AMLFQKLRSSGVEIDPVL 336
             +L+ A                                     LF++++SSG   D V 
Sbjct: 385 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVT 444

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-----ITILARAGRIEEATWVFRQA 391
           Y  +I     +G + +A  LL+E+ + N  PR T      I  L +  RIEEA  VF Q 
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G  +    F  +I+   + K+  +  E+ E+M   G  P++     +L  Y K    
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNI 563

Query: 452 ETADDLYSEMQEEG 465
           + A D+   M   G
Sbjct: 564 KKAADILETMTANG 577



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 198/430 (46%), Gaps = 9/430 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  SP+    NV++    +  + E A G   +    G  PD+ TY+T +    + G   
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  +  M Q+    D+  Y+ +I    K  +  +A  I +++   G +PD   +NT+I
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                    +EA  L  E+  +G+ PD  +++ L+N   +       + +F EM    C 
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T NI+ID    +    +A  L   M   G   S V+YNT++    +     EA  +
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEV 499

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  + I ++ VT+NT+I    K+   + AT L+++M   G++PN ITY++I+  + K
Sbjct: 500 FDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G + +AA + + + ++G EID V Y T+I    + G    A +LL  +R     P   A
Sbjct: 560 QGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 619

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE--- 424
               I  L R   + +A  +FR+  + GE  D   +  +     R      + E F+   
Sbjct: 620 YNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG--GPIKEAFDFLV 677

Query: 425 KMRSAGYFPD 434
           +M + G+ P+
Sbjct: 678 EMVNKGFMPE 687



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 222/505 (43%), Gaps = 47/505 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI-- 74
           P V   N +++ + RA Q   A  + +EM   G+APD  T++TL+  F +EG  ++A+  
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 75  ---------------------------------SWLQQMEQDRVSGDLVLYSNLIELARK 101
                                             ++QQ   D    D V Y+  +    +
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
               S A+ +   +   G  PD+  YNT+IN   K     EA+ ++ +M ++G  PDT +
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  E+       D+ T NI+I+   ++       RLF  M+
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YN L+         G A+ L   M+     ++ VTYNT+I    K +  E
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  +A+T++T+I    KA ++D A  L +++   G++ + + Y +++
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  + R     G  
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +I+   R     + + +F +M   G  PD+    +V  S     G ++E   
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKE--- 671

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLS 478
           A D   EM  +G    +   F+ML+
Sbjct: 672 AFDFLVEMVNKG-FMPEFSSFRMLA 695



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ ++D + +E  + P VF YN V+  + +  + + A G+ ++M  RG  PD  T++TLI
Sbjct: 321 ALKVMDLMLQEG-HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                +   + A+   +++    +S D+  ++ LI    K+ D    I +F  +KSSG  
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD V YN +I+          A  L+ EM   G    TV+Y+T+++   +  +  EA  V
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEV 499

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M+         T N +ID   +     DA  L   M K G+ P+ ++YN++L  Y +
Sbjct: 500 FDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                +A  +   M     E +VVTY T+I    K+   + A  L++ M+ +GI P    
Sbjct: 560 QGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 619

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER-VGLVAHAKRLLHEL 360
           Y+ +I    +   L  A  LF+++   G   D + Y+ +  +  R  G +  A   L E+
Sbjct: 620 YNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEM 679

Query: 361 RQPNTIPRETAITILARA 378
                +P  ++  +LA  
Sbjct: 680 VNKGFMPEFSSFRMLAEG 697



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 200/463 (43%), Gaps = 22/463 (4%)

Query: 95  LIELARKLSDYSKAISIF-SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
           L+   R+ SD   A+ +  S L      P    Y  ++   G A  F     L+ EMR +
Sbjct: 59  LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-----CPLDLTTCNIMIDVYGQLD 208
           G +   V   + +  Y    +F +A+ +   +N+++        D    N +++V  +  
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLV--LNQLDNDTFGVQADTVVFNHLLNVLVEGS 176

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             K  + ++  M   GI P VV+ NTL++    A     A+ +   M    +  +  T+ 
Sbjct: 177 KLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T+++ + +    E A  +  +M   G  P  +T + +I  + K G+++ A    Q+  + 
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRETAITILARAGRIEEA 384
           G E D V Y T +    + G V+HA +    +L E   P+     T I  L++ G ++EA
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  Q  D G + D + F  +I   S   +    +++  ++   G  PD +   +++N+
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERLDSDSNI 502
             K+ +      L+ EM+  GC   D+V + +L   L    K  N L+ L   ++S+   
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCT-PDEVTYNILIDHLCSMGKLGNALD-LLNEMESNGCP 474

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRR------TFNS 539
                ++ +     +  R+ +A  + ++M+ +       TFN+
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 242/506 (47%), Gaps = 21/506 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E     +V  +  ++  + R  +   A  L D M + G  PD  TY T++    K G   
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA++ L++M++ ++  ++V+YS +++   K  ++ KA +IF+ +   GI P+++ YN MI
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + +     + +A  L+ +M E+ + PD V++S L+N +V+  K   A  ++ EM   N  
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---------VYGEA 242
               T + MID + +    +DA  +F  M   G  P +++ NTL+          ++G  
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 243 EL--FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           ++     A  LF+ M    +  ++VT NT++    ++ + EKA  + +  Q   ++ +  
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           T + II    K  K+D A  LF  L  +GVE D V Y  +I  + + G    A+ +  E+
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P+T+   + +    +  R+EEA  +       G   D+  F  +I+ + +  + 
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ- 475
            + +E+F +M   G   D+     +++ + K+ +   A D++ EM   G V  D + F+ 
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG-VCPDTITFRS 481

Query: 476 MLSLYGAR----KDFNMLESLFERLD 497
           ML+    +    K   MLE L + +D
Sbjct: 482 MLAGLCTKAELQKGLTMLEDLQKSVD 507



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 189/403 (46%), Gaps = 46/403 (11%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E++   +V  Y+ ++  + +      A  +F EM ++GI P+  TY+ +I  +   G +
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLI-------------ELARKL---------SDYSKA 108
             A   L+ M +  +  D+V +S LI             EL R++           YS  
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 109 ISIF---SRLK----------SSGIVPDLVAYNTMINVFGKAKL-----------FKEAR 144
           I  F   SRL+          S G  PD++  NT+I+   +AK               A+
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            L +EM   GV PD V+ +TLL    EN K  +AL +F    +    LD  TCNI+I+  
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            + +   +A  LF S+   G++  VV+YN L+ V+ +   F  A  ++  M  K I  + 
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN+M+  + K    E+A  ++  M + G  P+ +T+ST+I  + KAG++D    LF +
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSE 431

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           +   G+  D + Y  +I  + +VG +  A+ +  E+      P
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 134/313 (42%), Gaps = 67/313 (21%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHG------------LFDEMRQRGIAPDRYTYSTLITC 63
           SP +   N ++    RAK+  L HG            LF EM   G++PD  T +TL+  
Sbjct: 217 SPDIITLNTLIDGCCRAKR-HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAG 275

Query: 64  FGKEGMFDSAISWLQQMEQDR-----------------------------------VSGD 88
             + G  + A+   +  ++ +                                   V  D
Sbjct: 276 LCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ LI +  K  ++ +A  I+  +   GI+P  V YN+M++ F K    +EAR +++
Sbjct: 336 VVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVD 395

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            M  +G  PD V++STL+  Y +  +  + L +F+EM +     D  T N +I  + ++ 
Sbjct: 396 SMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVG 455

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
               A  +F  M   G+ P  +++ ++L                 L  + E+++ +    
Sbjct: 456 DLNGAQDIFEEMVSSGVCPDTITFRSMLA---------------GLCTKAELQKGL---- 496

Query: 269 TMIKIYGKSLEHE 281
           TM++   KS++HE
Sbjct: 497 TMLEDLQKSVDHE 509


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 220/458 (48%), Gaps = 6/458 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A   P+V   N+++  + +A++ E A  +F+ M  +   P+  T+S+LI   GK G  
Sbjct: 186 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 245

Query: 71  DSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A S  ++M +   V G +V Y++LI    K         I+  +  +G  PDL   NT
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIV-YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            ++   KA   ++ R L  E+   G  PD  SYS L++  V+     E   +F  M E  
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C LD    N +ID + +      A +L   M+  G  P+VV+Y +++    + +   EA 
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 424

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF   +   I+ NVV Y+++I  +GK    ++A  +M+E+  +G+ PN  T++ ++   
Sbjct: 425 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 484

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            KA +++ A + FQ ++      + + Y  +I    RV     A     E+++    PNT
Sbjct: 485 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 544

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   T I+ LA+AG I EA+ +F +    G + D + +  MIE  S   K  +   +FE+
Sbjct: 545 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            R  G    +    ++L++  K    E A  + + ++E
Sbjct: 605 TRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 642



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 237/510 (46%), Gaps = 36/510 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV AYN +L  + + ++ E A  +F+EM+ R   P+  TY+ LI    +EG  ++A+  
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEI 181

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME+  +  +++  + +I+   K     +A SIF  +      P+ V ++++I+  GK
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  L E+M + G  P  + Y++L+  + +  +  +   ++ EM    C  DLT 
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  +D   +    +    LF  +   G  P   SY+ L+    +A L  E   LF  M+
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +    +   YN +I  + KS +  KA  L++EM+ +G  P  +TY ++I    K  +LD
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 421

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A MLF++ +S+G++++ V+Y ++I  + +VG                            
Sbjct: 422 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG---------------------------- 453

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
              RI+EA  +  +    G   ++  + C+++   + ++    +  F+ M+     P+  
Sbjct: 454 ---RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFE 494
             ++++N   ++R+F  A   + EMQ+ G   +   +  M+S  G  K  N+LE+  LF 
Sbjct: 511 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS--GLAKAGNILEASGLFS 568

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDA 524
           R  ++  I     ++ +      AN+  DA
Sbjct: 569 RFKANGGIPDSASYNAMIEGLSSANKAMDA 598



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 214/471 (45%), Gaps = 30/471 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS      ++ N +++++   A  +   MR+    P    Y+ LI   GK G+     
Sbjct: 6   FGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI---GKVGL----- 57

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                         ++L+  ++  A +L +   A+ +F +L+ +  VP   AYNTMI  +
Sbjct: 58  --------------MLLFPWVLCKANRLDE---AVELFEQLEQNRKVPCAYAYNTMIMGY 100

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           G A  F EA  L+E  + +G  P  ++Y+ +L    +  +  EAL +F EM     P ++
Sbjct: 101 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NV 159

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+ID+  +      A  +   M + G+ P+V++ N ++    +A+   EA  +F  
Sbjct: 160 PTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEG 219

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K    N VT++++I   GK    + A +L ++M + G  P AI Y+++I  + K G+
Sbjct: 220 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            +    +++++  +G   D  L  T +    + G     + L  E+     IP   + +I
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 339

Query: 375 ----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
               L +AG   E   +F    + G V D   +  +I+ F ++ K     ++ E+M+  G
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 399

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           + P       V++   K+   + A  L+ E +  G   +  V+  ++  +G
Sbjct: 400 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 162/314 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y++++  +++A      + LF  M+++G   D + Y+ +I  F K G  + A 
Sbjct: 330 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 389

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+       +V Y ++I+   K+    +A  +F   KS+GI  ++V Y+++I+ F
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 449

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EE+ ++G+ P+  +++ LL+  V+  +  EAL  F  M ++ CP + 
Sbjct: 450 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 509

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K+G+ P+ ++Y T++    +A    EA  LF  
Sbjct: 510 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 569

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  +YN MI+    + +   A  L +E + +G   +  T   ++    KA  
Sbjct: 570 FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAEC 629

Query: 315 LDRAAMLFQKLRSS 328
           L++AA++   L+ +
Sbjct: 630 LEQAAIVGAVLKET 643



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 160/356 (44%), Gaps = 7/356 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +   N  +  V +A + E    LF E+   G  PD  +YS LI    K G+ +    
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 355

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M++     D   Y+ +I+   K    +KA  +   +K  G  P +V Y ++I+   
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 415

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EA +L EE +  G+K + V YS+L++ + +  +  EA  +  E+ +     ++ 
Sbjct: 416 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 475

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   + +   +A   F SM+ +   P+ ++Y+ L+        F +A   ++ M
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 535

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           Q+  ++ N +TY TMI    K+    +A+ L    +  G  P++ +Y+ +I     A K 
Sbjct: 536 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKA 595

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             A  LF++ R  G  I     +T +V  + +    H    L +      + +ETA
Sbjct: 596 MDAYALFEETRLKGCNIHT---KTCVVLLDAL----HKAECLEQAAIVGAVLKETA 644


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 181/379 (47%), Gaps = 4/379 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P V  Y V++  +  A + + A  L+ +MR    +PDR TY TL+  FGK G  ++   
Sbjct: 302 GPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKR 361

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +  +ME D  + D+V Y+ LIE   K  D  +A  +   + + GI P+L  YNTMI    
Sbjct: 362 FWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLL 421

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   EA  L+E M   GVKP   SY   ++ Y ++    +A+  F  M +      + 
Sbjct: 422 KARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN  +    +     +A+ +F  + K G+ P  V+YN L++ Y +A    +A  L   M
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM 541

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K  E +V+  N++I    K+   + A  +   ++N  + P  +TY+ ++   GK GK+
Sbjct: 542 ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKI 601

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            +A  LF  +  SG   + + + +++    +   V  A ++   +      P+ +   T 
Sbjct: 602 LKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTI 661

Query: 372 ITILARAGRIEEATWVFRQ 390
           I  L R GRI+ A W F Q
Sbjct: 662 IYGLIREGRIDYAFWFFHQ 680



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 243/560 (43%), Gaps = 46/560 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+P V  Y +++  + ++   + A  + D M  +GI P+ +TY+T+I    K    D A+
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ ME   V      Y   I+   K  D +KAI  F  +K  GI+P + A N  +   
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +     EA  +  ++ + G+ PD+V+Y+ L+  Y +  +  +A  + +EM    C  D+
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +I+   +      A ++F  ++ + + P+VV+YN LL   G+     +A+ LF  
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N +T+N+++    K+   + A  +   M      P+ +TY+TII    + G+
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-- 372
           +D A   F +++   +  D V   T+I    R G V  A +++ E      +   +    
Sbjct: 671 IDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729

Query: 373 ----TILARAGRIEEATWVF-------------------------RQAFDAGEVKD---- 399
                IL  A  IEEA                             ++A DA  V D    
Sbjct: 730 ELMECILTEA-EIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTK 788

Query: 400 -------ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                  +  + C+++    +      +E+FE M+SAG  P++    L+L+++GK +   
Sbjct: 789 NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN 848

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN-MLESLFERLDSDSNINKKELHHVV 511
              DLYSEM+  GC  +   H  ++S      + N  L+  +E +  D +        ++
Sbjct: 849 KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908

Query: 512 AGIYERANRLNDASRIMNRM 531
            G+  +A R   A +I   M
Sbjct: 909 DGLL-KAGRSEQAMKIFEEM 927



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 220/495 (44%), Gaps = 52/495 (10%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V   N ++  + +A + + A  +F  ++   +AP   TY+ L+T  GKEG    A+  
Sbjct: 548  PDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALEL 607

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
               M +     + + +++L++   K      A+ +F R+      PD++ YNT+I  +G 
Sbjct: 608  FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII--YG- 664

Query: 137  AKLFKEARL-----LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF--------- 182
              L +E R+        +M+ + + PD V+  TL+   V + +  +A+ V          
Sbjct: 665  --LIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL 721

Query: 183  -----------------AEMNEVNCPLDLTTCN----------IMIDVYGQLDMAKDADR 215
                             AE+ E     ++  CN           +I V  +   A DA  
Sbjct: 722  QTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQN 781

Query: 216  LFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            +F    K +GI P++ SYN L+     +    +A+ LF  M+      N  TYN ++  +
Sbjct: 782  VFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 275  GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            GKS    K  +L  EM++RG EPNAIT++ II+   K+  L++A  L+ +L S      P
Sbjct: 842  GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 335  VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
              Y  +I    + G    A ++  E+      PN++     I    ++G I+ A  +F++
Sbjct: 902  CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 391  AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                G   D+  +  ++E      +    ++ FE+++  G  PD+     ++N  GK R 
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 451  FETADDLYSEMQEEG 465
             + A  L+SEM+  G
Sbjct: 1022 LDEALSLFSEMKNRG 1036



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 228/552 (41%), Gaps = 40/552 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           + +SP    Y  ++    +    E     ++EM   G APD  TY+ LI    K G  D 
Sbjct: 334 SSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDR 393

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L  M    +  +L  Y+ +I    K     +A+ +   ++S G+ P   +Y   I+
Sbjct: 394 AFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            +GK+    +A    E M+++G+ P   + +  L    E  +  EA  +F ++++     
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N+++  Y +      A +L   M   G +P V+  N+L+    +A     A  +F
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++  ++   VVTYN ++   GK  +  KA  L   M   G  PN IT+++++    K 
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRE 369
             +D A  +F ++       D + Y T+I    R G + +A    H++++   P+ +   
Sbjct: 634 DAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLC 693

Query: 370 TAITILARAGRIEEATWV-----------------------------FRQAFDAGEV--- 397
           T I  + R GR+E+A  V                               +A    E+   
Sbjct: 694 TLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVC 753

Query: 398 ----KDISVFGCMIELFSRNKKYANVIEVFEKM-RSAGYFPDSHIIALVLNSYGKLREFE 452
               +D  V   +I++  + KK  +   VF+K  ++ G  P       +++        E
Sbjct: 754 NSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTE 813

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
            A +L+ +M+  G   ++  +  +L  +G  K  N L  L+  + S         H+++ 
Sbjct: 814 KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIII 873

Query: 513 GIYERANRLNDA 524
               ++N LN A
Sbjct: 874 SALVKSNNLNKA 885



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 198/427 (46%), Gaps = 5/427 (1%)

Query: 44  EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
           +M + G   + Y+Y+ LI      G  + A+   ++M  + +   +  YS L+    +  
Sbjct: 191 KMTEVGFILNAYSYNGLIHLL-LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRG 249

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D  K +++   +KS G+ P++  Y   I   G+A+   +A  + +EM ++G  PD ++Y+
Sbjct: 250 DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            L++      K  +A  ++ +M   +   D  T   ++D +G++   +   R +  M   
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  P VV+Y  L+    ++     A  +  +M  K I  N+ TYNTMI    K+   ++A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L++ M++ G++P A +Y   I  +GK+G   +A   F+ ++  G+          +  
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
               G ++ A+ + ++L +    P+++     +   ++AG+I++AT +  +    G   D
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           + +   +I    +  +     ++F ++++    P      ++L   GK  +   A +L+ 
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609

Query: 460 EMQEEGC 466
            M E GC
Sbjct: 610 SMTESGC 616



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 201/430 (46%), Gaps = 13/430 (3%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ I  +  TY T+      +G    A   L++M +     +   Y+ LI L  
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLL- 211

Query: 101 KLSDY-SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
            L  + ++A+ ++ R+ S G+ P +  Y+ ++   G+    ++   L+EEM+  G++P+ 
Sbjct: 212 -LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNI 270

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRL 216
            +Y+  +       +  +A  +F EM++  C  D+ T  ++ID     G+LD AK+   L
Sbjct: 271 YTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKE---L 327

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           +  MR     P  V+Y TL+  +G+          +  M+      +VVTY  +I+   K
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           S + ++A +++  M  +GI PN  TY+T+I    KA +LD A  L + + S GV+     
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT----ILARAGRIEEATWVFRQAF 392
           Y   I  Y + G  A A      +++   +P   A       LA  GRI EA  +F    
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G   D   +  +++ +S+  +     ++  +M S G  PD  II  ++N+  K    +
Sbjct: 508 KCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVD 567

Query: 453 TADDLYSEMQ 462
            A  ++  ++
Sbjct: 568 AAWKMFGRLK 577



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 169/346 (48%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            + D   +     P++ +YN ++  +L +   E A  LF++M+  G  P+ +TY+ L+   
Sbjct: 782  VFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            GK    +       +M       + + ++ +I    K ++ +KA+ ++  L S    P  
Sbjct: 842  GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              Y  +I+   KA   ++A  + EEM + G  P++V Y+ L+N + ++ +   A  +F +
Sbjct: 902  CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            M +     DL +  I+++         +A + F  ++  G+DP  VSYN ++   G++  
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              EA+ LF  M+ + I  ++ TYN +I   G + + + A  + +E+Q  G+EP+  TY+ 
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081

Query: 305  IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            +I     +G  D+A  +F+K+   G   +   +  +   Y R GLV
Sbjct: 1082 LIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLV 1127



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/471 (21%), Positives = 216/471 (45%), Gaps = 7/471 (1%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P V  YN ++  ++R  + + A   F +M+ + ++PD  T  TLI    + G  + AI 
Sbjct: 652  NPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIK 710

Query: 76   WLQQ-MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + + + Q  +  +   +  L+E     ++  +AIS    L  + +  D      +I V 
Sbjct: 711  VVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVL 770

Query: 135  GKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K K   +A+ + ++  +  G+ P   SY+ L++  + ++   +AL +F +M       +
Sbjct: 771  CKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPN 830

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              T N+++D +G+         L+  MR  G +P+ +++N ++    ++    +A+ L+ 
Sbjct: 831  NFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYY 890

Query: 254  LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +   +      TY  +I    K+   E+A  + +EM + G  PN++ Y+ +I  +GK+G
Sbjct: 891  ELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSG 950

Query: 314  KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            ++D A  LF+K+   G+  D   Y  ++      G +  A +   EL+     P+T+   
Sbjct: 951  EIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYN 1010

Query: 370  TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
              I  L ++ R++EA  +F +  + G   D+  +  +I       K    ++++E+++  
Sbjct: 1011 FIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLV 1070

Query: 430  GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            G  P       ++  +      + A  ++ +M   GC  + +   Q+ + Y
Sbjct: 1071 GLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKY 1121



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/523 (21%), Positives = 220/523 (42%), Gaps = 81/523 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ A N  L  +    +   A  +F+++ + G++PD  TY+ L+ C+ K G  D A   
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M       D+++ ++LI    K      A  +F RLK+  + P +V YN ++   GK
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  L   M E G  P+T+++++LL+   +N     AL +F  M  +NC  D+ T
Sbjct: 598 EGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLT 657

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG--IDPSVVSYNTLL-------RVYGEAELFGE 247
            N +I  YG +   +  D  FW   +M   + P  V+  TL+       RV    ++  E
Sbjct: 658 YNTII--YGLIREGR-IDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714

Query: 248 AIH--------------LFRLMQRKEIEQ-----NVVTYNT----------MIKIYGKSL 278
            +H              +  ++   EIE+      ++  N+          +IK+  K  
Sbjct: 715 FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774

Query: 279 EHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           +   A N+  +  +N GI P   +Y+ ++     +   ++A  LF+ ++S+G   +   Y
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             ++ A+ +   +     L  E+R    +PN I     I+ L ++  + +A         
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA--------- 885

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                                     ++++ ++ S  + P       +++   K    E 
Sbjct: 886 --------------------------LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQ 919

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           A  ++ EM + GC  +  ++  +++ +G   + +    LF+++
Sbjct: 920 AMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 5/237 (2%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N +L +  E     + + +F LMQ+K I +N+ TY T+ K         +A   +++M  
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
            G   NA +Y+ +I +    G  + A  +++++ S G++     Y  ++VA  R G    
Sbjct: 195 VGFILNAYSYNGLIHLL-LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
              LL E++    +PN       I  L RA RI++A  +F++  D G   D+  +  +I+
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                 K     E++ KMR++ + PD      +++ +GK+ + ET    ++EM+ +G
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 153/377 (40%), Gaps = 42/377 (11%)

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           CN M+++  +    +D   +F  M+K  I  ++ +Y T+ +        G A    R M 
Sbjct: 134 CNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMT 193

Query: 257 RKEIEQNVVTYNTMI------------KIY----------------------GKSLEHEK 282
                 N  +YN +I            K+Y                      G+  +  K
Sbjct: 194 EVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
             NL++EM++ G+ PN  TY+  I   G+A ++D A  +F+++   G   D + Y  +I 
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 343 AYERVGLVAHAKRLLHELRQPNTIP-RETAITILARAGRIEEATWVFR---QAFDAGEVK 398
           A    G +  AK L  ++R  +  P R T IT++ + G++ +   V R   +    G   
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +IE   ++       ++ + M + G FP+ H    ++    K R  + A +L 
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
             M+  G   +   +   +  YG   D       FE +     +    +    A +Y  A
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM--PSIAACNASLYTLA 491

Query: 519 --NRLNDASRIMNRMNK 533
              R+++A  I N ++K
Sbjct: 492 ETGRISEAEDIFNDLHK 508


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 216/449 (48%), Gaps = 9/449 (2%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N +L   +R K+ + A+ LF        +PD  TYSTLI  F K   F  A   L +ME+
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAIS--IFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +     +Y+ +I   + L D  +  S  +  R       P ++ Y  +++   K+   
Sbjct: 62  RGIVPHNAVYNTII---KGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARI 118

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A L++E+M E G  P+ V+Y+TL+N + +     EA+ +F +M E +C  D+ T NI+
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID Y + +  +D  +L   M K G +P+ ++YNTL+    ++  + +A +L ++M R++ 
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + +  T+N MI ++ K  + + A  L Q M +RG  P+  TY+ +I+   +A ++D A  
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILA 376
           L +++  +G   D V Y +++    +   V  A  +   LR      + +   T I  L 
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           ++ R+++A  + R+    G   D+  +  +I  F +  +    +  F +M   G  P   
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
             ++V++   K         L   M E G
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 202/419 (48%), Gaps = 5/419 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP    Y+ ++    +A+ ++ A+ L DEM +RGI P    Y+T+I      G  DSA+ 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M Q   +  ++ Y+ L++   K +  S A  I   +  +G  P++V YNT+IN F 
Sbjct: 90  HYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EA +L  +M E    PD  +Y+ L++ Y +  +  +   +  EM +  C  +  
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   +     DA  L   M +    PS  ++N ++ ++ +      A  LF+LM
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    ++ TYN MI    ++   + A  L++ M   G  P+ +TY++I++   KA ++
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A  +++ LR+ G  +D V   T+I    +   +  A++LL E+ +  + P   A TIL
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                +A +++++   F +  D G V  +  +  +I+   ++ +  +   + + M   G
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 178/385 (46%), Gaps = 40/385 (10%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD + Y+T+IN F KA+ F++A  L++EM ++G+ P    Y+T++    +N +   AL  
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + +M   +C   + T  I++D   +     DA  +   M + G  P+VV+YNTL+  + +
Sbjct: 91  YRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA+ LF  M       +V TYN +I  Y K    +    L+QEM   G EPN IT
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 302 YSTI-----------------------------------IAIWGKAGKLDRAAMLFQKLR 326
           Y+T+                                   I ++ K G+LD A  LFQ + 
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
             G   D   Y  MI    R   +  A++LL  + +    P+ +   + ++ L +A +++
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  V+    + G   D+     +I+   ++++  +  ++  +M   G  PD     +++
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 443 NSYGKLREFETADDLYSEMQEEGCV 467
           + + K  + + +   +SEM ++GCV
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCV 414



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 168/338 (49%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A++ + + +   +PSV  Y +++  + ++ +   A  + ++M + G AP+  TY+TLI  
Sbjct: 87  ALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F K G  D A+    QM ++  S D+  Y+ LI+   K         +   +   G  P+
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
            + YNT+++   K+  + +A  L + M  +  KP   +++ +++++ +  +   A  +F 
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M +  C  D+ T NIMI    + +   DA +L   M + G  P VV+YN+++    +A 
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  ++ +++      +VVT +T+I    KS   + A  L++EM+  G  P+ + Y+
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            +I  + KA +LD++   F ++   G     + Y  +I
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 424



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 136/284 (47%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP VF YN+++    + ++ +    L  EM + G  P+  TY+TL+    K G + 
Sbjct: 165 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 224

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +  Q M +         ++ +I++  K+     A  +F  +   G +PD+  YN MI
Sbjct: 225 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 284

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +A    +AR L+E M E G  PD V+Y+++++   +  +  EA  V+  +      
Sbjct: 285 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 344

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD+ TC+ +ID   +     DA++L   M + G  P VV+Y  L+  + +A+   +++  
Sbjct: 345 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 404

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           F  M  K     V+TY+ +I    KS        L++ M  RG+
Sbjct: 405 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 147/319 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  +P+V  YN ++    +    + A  LF++M +   +PD +TY+ LI  + K+    
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 189

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                LQ+M +     + + Y+ L++   K   Y  A ++   +      P    +N MI
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           ++F K      A  L + M ++G  PD  +Y+ +++     ++  +A  +   M E  CP
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N ++    +     +A  ++  +R  G    VV+ +TL+    ++    +A  L
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 369

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M+R     +VV Y  +I  + K+ + +K+     EM ++G  P  ITYS +I    K
Sbjct: 370 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429

Query: 312 AGKLDRAAMLFQKLRSSGV 330
           + ++    ML + +   GV
Sbjct: 430 SARVRDGCMLLKTMLERGV 448



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 140/305 (45%), Gaps = 5/305 (1%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N LL  +   +   EA  LF+         + +TY+T+I  + K+ + ++A  L+ EM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           RGI P+   Y+TII      G++D A + ++ ++        + Y  ++ A  +   ++ 
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAP-SVITYTILVDALCKSARISD 120

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  +L ++ +    PN +   T I    + G ++EA  +F Q  +     D+  +  +I+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            + + ++  +  ++ ++M   G  P+      +++S  K  ++  A +L   M    C  
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 469 SDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           S      M+ ++      ++   LF+ +     +     ++++     RANR++DA +++
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 529 NRMNK 533
            RM +
Sbjct: 301 ERMTE 305


>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/560 (22%), Positives = 248/560 (44%), Gaps = 80/560 (14%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +  W+  +  Y      YN+++R   R  + + A GLF EM++    PD  TY+ +I   
Sbjct: 137 VFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAH 196

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G +  A++ +  M +  +      Y+NLI       ++ +A+++  ++  +G+ PDL
Sbjct: 197 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 256

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V +N +++ F     + +A    E M+   ++PDT + + +++  V+  ++ +A+ +F  
Sbjct: 257 VTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNS 316

Query: 185 MNE--VNCPLDLTT----------C-------------------------NIMIDVYGQL 207
           M E    C  D+ T          C                         N +I  Y   
Sbjct: 317 MREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAAR 376

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
            M  +A   F  +++ G  P +VSY +LL  YG ++   +A  +F  M+R +++ N+V+Y
Sbjct: 377 GMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSY 436

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA--------------- 312
           N +I  YG +     A  +++EM+  GI+PN ++  T++A  G+                
Sbjct: 437 NALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEM 496

Query: 313 --------------------GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
                               G+ D+A  L++ +R   ++ D V Y  +I    ++     
Sbjct: 497 RGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGE 556

Query: 353 AKRLLHE---LRQPNTIPRE---TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
           A   + E   L+ P  + +E   +AI   ++ G+I EA   F     +G   D+  +  M
Sbjct: 557 ALSFMEEIMHLKLP--LSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAM 614

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           ++ ++  + +     +FE+M ++    D+   A ++ S+ K  +      L   M+E+  
Sbjct: 615 LDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEI 674

Query: 467 VFSDQVHFQMLSLYGARKDF 486
            FSD + F+M+S     +D+
Sbjct: 675 PFSDTIFFEMVSACSILQDW 694



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 227/495 (45%), Gaps = 9/495 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N++L       Q+  A   F+ M+   I PD  T + +I C  K   +D AI  
Sbjct: 254 PDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEI 313

Query: 77  LQQMEQDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              M + +   + D+V ++++I L           + F+ + + G+ P++V+YN +I  +
Sbjct: 314 FNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAY 373

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
               +  EA L   E+++ G +PD VSY++LLN Y  + K  +A  +F  M       +L
Sbjct: 374 AARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNL 433

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +ID YG   +  DA ++   M + GI P+VVS  TLL   G      +   +   
Sbjct: 434 VSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTA 493

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            + + I+ N V YN  I       E++KA  L + M+ + I+ +++TY+ +I+   K  K
Sbjct: 494 AEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSK 553

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP---RETA 371
              A    +++    + +   +Y + I AY + G +  A+   + ++     P     TA
Sbjct: 554 YGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTA 613

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           +     A    E  +   +  +A  +K D      ++  F++  +   V+ + E MR   
Sbjct: 614 MLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKE 673

Query: 431 Y-FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNM 488
             F D+    +V ++   L+++ TA D+   ++    V S     Q L SL  + K   M
Sbjct: 674 IPFSDTIFFEMV-SACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETM 732

Query: 489 LESLFERLDSDSNIN 503
           L+  F+ L S +++N
Sbjct: 733 LKLFFKMLASGADVN 747



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 165/362 (45%), Gaps = 35/362 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P + +Y  +L    R+++   A  +FD M++  + P+  +Y+ LI  +G  G+   AI
Sbjct: 394 FRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAI 453

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++MEQ+ +  ++V    L+    + S   K  ++ +  +  GI  + VAYN  I   
Sbjct: 454 KILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSC 513

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                + +A  L + MR++ +K D+V+Y+ L++   +  K+ EALS   E+  +  PL  
Sbjct: 514 MNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSK 573

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              +  I  Y +     +A+  F  M+  G  P VV+Y  +L  Y  AE + +A  LF  
Sbjct: 574 EVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEE 633

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN------AITYSTIIAI 308
           M+   I+ + +    +++ + K  +  +  +L + M+ + I  +       ++  +I+  
Sbjct: 634 MEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQD 693

Query: 309 W-----------------------------GKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           W                             GK+GK++    LF K+ +SG +++   Y  
Sbjct: 694 WRTAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSI 753

Query: 340 MI 341
           ++
Sbjct: 754 LL 755



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 27/328 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AYN  + + +   +++ A GL+  MR++ I  D  TY+ LI+   K   +  A+S+++++
Sbjct: 505 AYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEI 564

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
              ++     +YS+ I    K     +A S F+ +KSSG  PD+V Y  M++ +  A+ +
Sbjct: 565 MHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENW 624

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD------- 193
           ++A  L EEM    +K DT++ + L+  + +  +    LS+   M E   P         
Sbjct: 625 EKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEM 684

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS--VVS---YNTLLRVYGEAELFGEA 248
           ++ C+I+ D    +DM K             I+PS  V+S    N  L   G++      
Sbjct: 685 VSACSILQDWRTAVDMIKY------------IEPSLPVISSGCLNQFLHSLGKSGKIETM 732

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + LF  M     + N+ TY+ ++K    S    K   ++Q M++ GI P+   Y  I + 
Sbjct: 733 LKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSKEMYHDISSF 792

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
             K    + AA++ ++L   G+ I  VL
Sbjct: 793 SQKCCGNENAAVIRERL---GMNIYVVL 817


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 225/473 (47%), Gaps = 10/473 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +YN ++  + + K+ E A  L  EM      P+ +TY  L+    KEG  + A+  
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 77  LQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           L +M++  +  D+V+YS LI    ++   D  KA  +F  +   GI P++V Y+ +IN F
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA--LFDEMLEKGISPNVVVYSCLINGF 125

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K  L++EA  ++  M E+G++PD  +Y+ ++    ++ +  +AL +F  M E       
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR- 253
            T N++I+   +     DA ++F +M + G    VVSYNTL+          EA+ LF  
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 254 -LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            L     +E +V+T+NT+I+   K    +KA  +   M  RG   N  T   +I  + K+
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           G +D+A  L++++   G+      Y  MI  + ++ ++  AK L   ++     P     
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T +  L +   +E+A  +F++  ++    D   F  MI+   +     +  E+   M+ 
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            G  PD++  +  +N   KL + E A   +  M   G    + V+  ++  +G
Sbjct: 426 MGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG 478



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 229/477 (48%), Gaps = 12/477 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P+ F Y +++  + +  + E A  L  EM+++G+  D   YSTLI+ F  +G  
Sbjct: 37  EGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCL 96

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D   +   +M +  +S ++V+YS LI    K   + +A ++   +   GI PD+  Y  M
Sbjct: 97  DRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCM 156

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    K    ++A  L + M E+G +P TV+Y+ L+N   +     +A  +F  M E   
Sbjct: 157 IGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK 216

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMG--IDPSVVSYNTLLRVYGEAELF 245
            L++ + N +I      G+LD   +A +LF S+ + G  ++P V+++NT+++   +    
Sbjct: 217 RLEVVSYNTLIMGLCNNGKLD---EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRL 273

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +A+ ++  M  +    N+ T + +I  Y KS   +KA  L + +   G+ P++ TYS +
Sbjct: 274 DKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVM 333

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I  + K   L+ A  LF +++ SG+      Y T++ +  +   +  A+RL  E+++ N 
Sbjct: 334 IDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNC 393

Query: 366 IPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P   +  I+     +AG I  A  +       G   D   +   I   S+  +      
Sbjct: 394 EPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKG 453

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            F+ M ++G  PD+H+   ++  +G   E E   +L  +M + G +   ++   +L+
Sbjct: 454 AFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILT 510



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 192/434 (44%), Gaps = 7/434 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R  A+ D + E+   SP+V  Y+ ++    +   W  A  +   M +RGI PD YTY+ +
Sbjct: 98  RGKALFDEMLEKG-ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCM 156

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G    A+     M +       V Y+ LI    K      A  IF  +   G 
Sbjct: 157 IGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK 216

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEA 178
             ++V+YNT+I          EA  L   + E G  V+PD ++++T++    +  +  +A
Sbjct: 217 RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKA 276

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           + ++  M E     +L TC+I+I  Y +  +   A  L+  + K+G+ PS  +Y+ ++  
Sbjct: 277 VEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDG 336

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +  +   A  LF  M+   +   +  YNT++    K    E+A  L QEM+    EP+
Sbjct: 337 FCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD 396

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            I+++ +I    KAG +  A  L   ++  G+  D   Y + I    ++G +  AK    
Sbjct: 397 TISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD 456

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            +      P     ++ I        IEE   + RQ  D G + D+ +   ++     + 
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSA 516

Query: 415 KYANVIEVFEKMRS 428
           ++ +V+E+     S
Sbjct: 517 EHLHVMELLPNFSS 530



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 12/360 (3%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +K   I+PD+V+YNT+IN   K K  ++A  L+ EM     +P++ +Y  L++   +  +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVS 231
             EA+ +  EM      +D+   + +I  +   G LD  K    LF  M + GI P+VV 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK---ALFDEMLEKGISPNVVV 117

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+  + +  L+ EA  +   M  + I+ +V TY  MI    K     KA +L   M 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +G EP+ +TY+ +I    K G +  A  +F+ +   G  ++ V Y T+I+     G + 
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237

Query: 352 HAKRLLHELR------QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
            A +L   L       +P+ I   T I  L + GR+++A  ++    + G   ++     
Sbjct: 238 EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHI 297

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I  + ++      +E+++++   G  P S   +++++ + K+     A  L+S M+  G
Sbjct: 298 LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 9/456 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  +N+ +  + RA +   A  +FD MR+ G  P+R TY+ L++     G    A +  +
Sbjct: 50  ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYE 109

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +   S D+V Y+ L+    K+    +A+ IF      G VPD+V YN +IN F KA 
Sbjct: 110 RMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKAD 169

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA+ +++ M  + + PD V+Y++L+N   +N +  EA  +  +      P  +T   
Sbjct: 170 KLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG--FSPNVITYST 227

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++  +  +L   + A +L   M   G  P +VSYN L+      +   EA+ LF  + R+
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
             E  V TYN +I    K     +A  L   +   G+EP+AITY+  I    KAG+++ A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
            ++ + +   G   D V +  +I    +   V  A+ LL  +      PN I   T I  
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV---IEVFEKMRSAGY 431
             RAG+ ++A   F++    G    +  +  +++   + ++   +   I +F+ M   G 
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD    + +++  GK  + + A  L   M+ +GC+
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 503



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 215/459 (46%), Gaps = 11/459 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN +L  +    +   A  L++ M + G +PD  TY+TL+  F K G  D A+  
Sbjct: 83  PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKI 142

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                +     D+V Y+ LI    K     +A  I  R+ S  +VPD+V YN+++N   K
Sbjct: 143 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EAR+LI +   +G  P+ ++YSTL++ L  E  +   A  +  +M    C  D+ 
Sbjct: 203 NGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIV 259

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N +I    +     +A +LF S+ + G +P V +YN L+    + +   EA  LF  +
Sbjct: 260 SYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 319

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  +E + +TY   I    K+   E A  ++++M  +G  P+ ++++ +I    K  ++
Sbjct: 320 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 379

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETA 371
           D A +L   + + G   + + + T+I    R G    A    K +L    +P  +     
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439

Query: 372 ITILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           +  L +A   GRI+EA  +F    + G V D+  +  +I+   +  K  +   +   M +
Sbjct: 440 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            G  P+ +    +++    L + + A +L+  M E+GCV
Sbjct: 500 KGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 222/474 (46%), Gaps = 11/474 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A YSP V  YN +L    +  + + A  +FD   +RG  PD  TY+ LI  F K    D
Sbjct: 113 KAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 172

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   LQ+M  + +  D+V Y++L+    K     +A  +   +   G  P+++ Y+T+I
Sbjct: 173 EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLI 229

Query: 132 NVFGKA-KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +   +  +  + AR L+E+M   G KPD VSY+ L++         EAL +F  +     
Sbjct: 230 SGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGY 289

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T NI+ID   + D   +A  LF  + K G++P  ++Y   +    +A    +A+ 
Sbjct: 290 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 349

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + + M  K    +VV++N +I    K    ++A  L+  M+ +G  PNAI+++T+I    
Sbjct: 350 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 409

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV---GLVAHAKRLLHEL----RQP 363
           +AGK  +A   F+++   GV+   V Y  ++    +    G +  A  L   +    R P
Sbjct: 410 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + +     I  L +AG++++A  +       G + ++  +  +I       K    +E+F
Sbjct: 470 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELF 529

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             M   G  PD+     ++++  K    + A  L+    E G V +  ++F ++
Sbjct: 530 VAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 3/345 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +YN ++  + R +    A  LF  + ++G  P+  TY+ LI    KE   + A   
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              + +  +  D + Y+  I+   K      A+ +   +   G VPD+V++N +IN   K
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   EA +L+  M  +G  P+ +S++TL+       K+ +A++ F EM +      + T
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435

Query: 197 CNIMIDVYG---QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            NI++D      Q    K+A  LF +M + G  P VV+Y+ L+   G+A    +A  L  
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 495

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+ K    NV TYN++I       + ++A  L   M  +G  P+ ITY TII+   K  
Sbjct: 496 AMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQE 555

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +D+A  LF     +GV     +Y ++I     V  V  A +LL 
Sbjct: 556 MVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 233/523 (44%), Gaps = 35/523 (6%)

Query: 39  HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           H ++D++  R  +PD YT   L+    K G  + A  +++Q+    +  D+  ++  I  
Sbjct: 2   HTVYDKL-VRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISG 59

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             + S    A ++F  ++  G  P+ + YN +++         +A+ L E M + G  PD
Sbjct: 60  LCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+Y+TLL+ + +  K  EAL +F    +     D+ T N +I+ + + D   +A R+  
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ 179

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M    + P VV+YN+L+    +     EA     L+  K    NV+TY+T+I    + L
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCREL 236

Query: 279 EH-EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              E A  L+++M   G +P+ ++Y+ +I    +   +  A  LF  +   G E +   Y
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 338 QTMI---VAYERV--------GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
             +I   +  +RV        GLV H         +P+ I     I  L +AGR+E+A  
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHG-------LEPDAITYTVFIDGLCKAGRVEDALL 349

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           + +   + G V D+     +I    + K+      +   M + G  P++     ++    
Sbjct: 350 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 409

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLE--SLFERLDSDSNI 502
           +  +++ A   + EM + G V    V + +L   L  AR++  + E  +LF+ +     +
Sbjct: 410 RAGKWKKAMTTFKEMLKRG-VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 468

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRR------TFNS 539
                +  +     +A +L+DA R++  M  +       T+NS
Sbjct: 469 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 3/312 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P V  YN+++  +L+  +   A  LF  + + G+ PD  TY+  I    K G  + A+
Sbjct: 289 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 348

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ M++     D+V ++ +I    K     +A  + S +++ G  P+ +++NT+I   
Sbjct: 349 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 408

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV---ENHKFVEALSVFAEMNEVNCP 191
            +A  +K+A    +EM ++GVKP  V+Y+ L++      +  +  EA+++F  M E    
Sbjct: 409 CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 468

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +ID  G+     DA RL  +M   G  P+V +YN+L+      +   EA+ L
Sbjct: 469 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALEL 528

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  K    + +TY T+I    K    +KA  L       G+ P +  Y ++I     
Sbjct: 529 FVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCA 588

Query: 312 AGKLDRAAMLFQ 323
             ++D A  L Q
Sbjct: 589 VARVDEALKLLQ 600


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 216/434 (49%), Gaps = 5/434 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS+   N +L       +   A  L D+M + G  PD  T++TL+    +      A+
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + +++M       DLV Y  +I    K  +   A+++ ++++   I  D+V YNT+I+  
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K   +A  L  +M  +G+KPD  +Y+ L++      ++ +A  + ++M E N   DL
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              N +ID + +     +A++L+  M K     P VV+YNTL++ + + +   E + +FR
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ P+ +TY+ ++      G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            ++ A ++F+ ++   +++D V Y TMI A  + G V     L   L     +PN +   
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T ++   R G  EEA  +F +  + G + +   +  +I    R+   A   E+ ++MRS 
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560

Query: 430 GYFPDSHIIALVLN 443
           G+  D+    LV N
Sbjct: 561 GFAGDASTFGLVTN 574



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 208/447 (46%), Gaps = 11/447 (2%)

Query: 27  RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
           R VL+  + + A GLF +M +    P    +S L++   K   FD  IS  +QM+   +S
Sbjct: 48  RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
            +L  YS  I    + S  S A++I  ++   G  P +V  N+++N F       EA  L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY-- 204
           +++M E G +PDTV+++TL++   +++K  EA+++   M    C  DL T   +I+    
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 205 -GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
            G+ D+A +   L   M K  I+  VV YNT++    + +   +A  LF  M+ K I+ +
Sbjct: 228 RGEPDLALN---LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V TYN +I           A+ L+ +M  + I P+ + ++ +I  + K GKL  A  L+ 
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344

Query: 324 KL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           ++ +S     D V Y T+I  + +   V     +  E+ Q     NT+   T I    +A
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
              + A  VF+Q    G   DI  +  +++    N      + VFE M+      D    
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
             ++ +  K  + E   DL+  +  +G
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKG 491



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 162/344 (47%), Gaps = 37/344 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ +    V  YN ++  + + K  + A  LF++M  +GI PD +TY+ LI+C    G +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNT 129
             A   L  M +  ++ DLV ++ LI+   K     +A  ++  + KS    PD+VAYNT
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361

Query: 130 MINVFGKAK-------LFKE----------------------------ARLLIEEMREQG 154
           +I  F K K       +F+E                            A+++ ++M   G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           V PD ++Y+ LL+    N     AL VF  M + +  LD+ T   MI+   +    +D  
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            LF S+   G+ P+VV+Y T++  +    L  EA  LF  M+      N  TYNT+I+  
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +   +  L++EM++ G   +A T+  +  +    G+LD++
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 199/389 (51%), Gaps = 5/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLF-DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+V+ YN+++R +    Q E A G+  D+MR  G AP+  TY+TL+  F + G  D+A 
Sbjct: 151 APNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAE 210

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +  M +  V   LV ++ ++    K      A  +F  +   G+ PD V+YNT+++ +
Sbjct: 211 RLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGY 270

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA    EA  +  EM ++GV PD V++++L++          A+++  +M E    ++ 
Sbjct: 271 CKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNE 330

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +ID + +     DA      MR+  I PSVV YN L+  Y +     EA  L   
Sbjct: 331 FTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHE 390

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ K ++ +VVTY+T++  Y K  + + A  L ++M  +G+ P+AITYS++I    +  +
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L  A  LF+K+   G++ D   Y T+I  + + G V  A  L  E+ +    P+ +    
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKD 399
            I  L+++ R +EA  +  + +    V D
Sbjct: 511 LIDGLSKSARTKEAQRLLFKLYYEDPVPD 539



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 204/426 (47%), Gaps = 6/426 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+PS+ AYN VL   L       A  L   M + G+AP+ YTY+ L+      G  + A+
Sbjct: 116 YAPSLLAYNAVLL-ALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 75  SWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +   M     + ++V Y+ L+    +  +   A  +   ++  G+ P LV +NT++N 
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA   ++AR + +EM  +G+ PD VSY+TL++ Y +     EAL+VFAEM +     D
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   +I    +    + A  L   MR+ G+  +  ++  L+  +       +A+   +
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   I+ +VV YN +I  Y K    ++A  L+ EM+ +G++P+ +TYSTI++ + K G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
             D A  L +K+   GV  D + Y ++I        +  A  L  ++ Q    P E   T
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            L     + G +++A  +  +    G + D+  +  +I+  S++ +      +  K+   
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 430 GYFPDS 435
              PD+
Sbjct: 535 DPVPDN 540



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 208/442 (47%), Gaps = 19/442 (4%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P+V  YN ++    RA + + A  L   MR+ G+ P   T++T++    K G  + 
Sbjct: 184 AGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMED 243

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A     +M ++ ++ D V Y+ L+    K     +A+++F+ +   G+VPD+V + ++I+
Sbjct: 244 ARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIH 303

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A   + A  L+ +MRE+G++ +  +++ L++ +  N    +AL    EM E     
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            +   N++I+ Y +L    +A  L   M   G+ P VV+Y+T+L  Y +      A  L 
Sbjct: 364 SVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELN 423

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M +K +  + +TY+++I+   +      A  L ++M   G++P+  TY+T+I    K 
Sbjct: 424 RKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKE 483

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR---- 368
           G + +A  L  ++   GV  D V Y  +I    +      A+RLL +L   + +P     
Sbjct: 484 GNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKY 543

Query: 369 ------------ETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
                       ++ + +L   +  G + +A  V++   D     D SV+  +I    R 
Sbjct: 544 EALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRG 603

Query: 414 KKYANVIEVFEKMRSAGYFPDS 435
                 +   +++   G+ P+S
Sbjct: 604 GNIMKALSFHKQLLRCGFSPNS 625



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 183/399 (45%), Gaps = 42/399 (10%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P L+AYN ++     A L   AR L+  M   GV P+  +Y+ L+       +  EA
Sbjct: 115 GYAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 179 LSVFA-EMNEVNCPLDLTTCNIMIDVY---GQLDMA------------------------ 210
           L V   +M    C  ++ T N ++  +   G++D A                        
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 211 --------KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
                   +DA ++F  M + G+ P  VSYNTL+  Y +A    EA+ +F  M +K +  
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +VVT+ ++I    ++   E+A  L+ +M+ RG+  N  T++ +I  + + G LD A +  
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
           +++R   ++   V Y  +I  Y ++G +  A+ L+HE+     +P+ +   T ++   + 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G  + A  + R+    G V D   +  +I      ++  +  E+FEKM   G  PD    
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +++ + K    + A  L+ EM ++G V  D V + +L
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKG-VLPDVVTYSVL 511



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 50/237 (21%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++R +   ++   A  LF++M Q G+ PD +TY+TLI    KEG    A+S 
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV--- 133
             +M +  V  D+V YS LI+   K +   +A  +  +L     VPD + Y  +++    
Sbjct: 493 HDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRT 552

Query: 134 ------------FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS- 180
                       F    L  +A  + + M ++  K D   YS L++ +      ++ALS 
Sbjct: 553 AEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSF 612

Query: 181 ----------------------VFAEMNEV----------NCP--LDLTTCNIMIDV 203
                                 +F E   V          NC    D  T   +ID+
Sbjct: 613 HKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDL 669


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 222/451 (49%), Gaps = 7/451 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +Y  ++R +   ++   A GL  +M+  G+ PD  TY TLI         D A+  
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M +  +  ++V+YS L++   K   +     +F  +   GI PD+V Y  +I+   +
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K+A  ++++M E+G++P+ V+Y+ L+N   +     EA+S+   M E    LD  T
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290

Query: 197 CNIMI-DVYGQLDMAKDADRLFWSM--RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N +I  + G L+M  +A  L   M   +  ++P+VV++N+++    +     +A  +  
Sbjct: 291 YNTLITGLSGVLEM-DEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRD 349

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M       N+VT+N +I    +  + +KA  LM EM + G+EP++ TYS +I  + K  
Sbjct: 350 MMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMW 409

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++DRA  L  K+R  G+E + V Y  ++ A    G++  A+    E+ +   +      T
Sbjct: 410 QVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYST 469

Query: 374 ILARAGRIEE---ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           ++  A R+ +   A    +   D G + D   +  +I +F+ +        V ++M ++G
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           + PD  +   ++  YG   + E   +L  EM
Sbjct: 530 FVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 193/399 (48%), Gaps = 18/399 (4%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +L    ++ ++ S L S   V D V+YNT++    +     +A L +  +     +P  V
Sbjct: 58  RLVPLPESPALLSSLPS---VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAV 114

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+TL+       +  +A+ +  +M       D+ T   +I   G  D A D D+    +
Sbjct: 115 SYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLI--RGLCD-AADVDKAVELL 171

Query: 221 RKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
           R+M   GI+P+VV Y+ LL+ Y +A  +     +F  M  + IE +VV Y  +I    + 
Sbjct: 172 REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            + +KAT +M +M  RG+EPN +TY+ +I    K G +  A  L   +   GV +D V Y
Sbjct: 232 GKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291

Query: 338 QTMIVAYERVGLVAHAKRLLHE------LRQPNTIPRETAITILARAGRIEEATWVFRQA 391
            T+I     V  +  A  LL E      + +PN +   + I  L + GR+ +A  V    
Sbjct: 292 NTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMM 351

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            + G   ++  F  +I    R  K    +E+ ++M S+G  PDS   ++++N + K+ + 
Sbjct: 352 AENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQV 411

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + A+ L S+M+ +G +  + VH+  + L  A  +  M+E
Sbjct: 412 DRAESLLSKMRRDG-IEPELVHY--IPLLAALCEQGMME 447



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 223/506 (44%), Gaps = 49/506 (9%)

Query: 53  DRYTYSTLITCFGKEG-MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           D  +Y+T++    ++G   D+A+  L+ M  +      V Y+ L+          +A+ +
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
              +++SG+ PD+V Y T+I     A    +A  L+ EM E G++P+ V YS LL  Y +
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             ++     VF EM+      D+     +ID   +    K A ++   M + G++P+VV+
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM- 290
           YN L+    +     EA+ L   M  K +  + VTYNT+I      LE ++A  L++EM 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 291 -QNRGIEPNAITYSTIIAIWGKAG-----------------------------------K 314
                +EPN +T++++I    K G                                   K
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           + +A  L  ++ SSG+E D   Y  +I  + ++  V  A+ LL ++R    +P  +    
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L   G +E+A   F +     ++ D+  +  MI    R +   +  E  + M   G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NML 489
             PDS   ++++N +    +   A+ +  +M   G V    V   ++  YGA+ D   +L
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554

Query: 490 ESLFERLDSDSNINKKELHHVVAGIY 515
           E + E    D  ++ K    +++ IY
Sbjct: 555 ELIREMTAKDIALDSK----IISTIY 576



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 177/386 (45%), Gaps = 38/386 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P+V  Y+ +L+   +A +WE    +F+EM  RGI PD   Y+ LI    +EG   
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   + +M +  +  ++V Y+ LI    K     +A+S+ + +   G+  D V YNT+I
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295

Query: 132 NVFGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                     EA  L+EEM   E  V+P+ V+++++++   +  +  +A  V   M E  
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355

Query: 190 CPLDLTTCN-----------------------------------IMIDVYGQLDMAKDAD 214
           C  +L T N                                   I+I+ + ++     A+
Sbjct: 356 CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   MR+ GI+P +V Y  LL    E  +  +A + F  M  K  + +VV Y+TMI   
Sbjct: 416 SLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGA 474

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            +  + + A   ++ M + G+ P+++TYS +I ++  +G L  A  + +++ +SG   D 
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL 360
            ++ ++I  Y   G       L+ E+
Sbjct: 535 AVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 39/342 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  ++D + E     P+V  YNV++ ++ +    + A  L + M ++G+A D  TY+TL
Sbjct: 236 KATQVMDKMMERG-LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294

Query: 61  ITCFGKEGMFDSAISWLQQM-------------------------------------EQD 83
           IT        D A+  L++M                                      ++
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
             + +LV ++ LI    ++    KA+ +   + SSG+ PD   Y+ +IN F K      A
Sbjct: 355 GCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA 414

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
             L+ +MR  G++P+ V Y  LL    E     +A + F EM++ NC LD+   + MI  
Sbjct: 415 ESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHG 473

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
             +L   K A+     M   G+ P  V+Y+ L+ ++  +   G A  + + M       +
Sbjct: 474 ACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           V  ++++IK YG   + EK   L++EM  + I  ++   STI
Sbjct: 534 VAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 36/193 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F Y++++    +  Q + A  L  +MR+ GI P+   Y  L+    ++GM + A ++
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNF 452

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSD----------------------YSKAISIFS- 113
             +M ++    D+V YS +I  A +L D                      YS  I++F+ 
Sbjct: 453 FDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFAN 511

Query: 114 ------------RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                       ++ +SG VPD+  ++++I  +G     ++   LI EM  + +  D+  
Sbjct: 512 SGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKI 571

Query: 162 YSTLLNLYVENHK 174
            ST+    V N++
Sbjct: 572 ISTIYTCLVANNE 584


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 203/428 (47%), Gaps = 8/428 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M +R ++PD ++Y  LI    K G  + A +  Q++    V+   V Y++LI      + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +  A  +F+ +   G  P  V YN MI+   K  + +EA  LI++M E G  PD V+Y+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++   ++ +  EAL +F EM  + C  +  + N +I    Q      A ++F  M    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH--EK 282
           I P   SY  L+    +A    EA  LF+ M    I  + VTYN  + I+G  L +  ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN--VVIHGMCLAYTLDE 238

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L + M+++G  P+  T++ +I    K GKLD A  L +++   G   D V Y T+I 
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLIS 298

Query: 343 AYERVGLVAHAKRLLHEL--RQ--PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
               +  V  A+ LL ++  RQ  P  + + T I  L +AGRI+EA  V      +G+  
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  ++    R  +     E+   M + G  P+      +++   K      A  ++
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418

Query: 459 SEMQEEGC 466
           ++M+  GC
Sbjct: 419 AQMKSSGC 426



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 210/466 (45%), Gaps = 40/466 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP  ++Y +++  + +A +   A  LF ++   G+ P    Y++LI        FD
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M +       V Y+ +I+ + K     +A  +  ++   G VPD+V YNT++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+   +EA LL  EM   G  P+  S++T++    +  K  +A  VF EM   + P
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  +  I+ID   +     +A +LF  M   GI PS V+YN ++     A    EA+ L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA---- 307
           F+ M+ K    +  T+N +I  + K  + ++A  L++ M + G  P+ +TYST+I+    
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 308 -----------------------------IWG--KAGKLDRAAMLFQKLRSSGVEIDPVL 336
                                        I G  KAG++  A  +   + SSG   D V 
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 337 YQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y T++  + R G    A+ LL ++      PN +     ++ L +A R+ EA  VF Q  
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
            +G   ++  +  +I  F    +    +++F +M  AG  PD H++
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD-HVV 467



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 183/384 (47%), Gaps = 4/384 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V  YN V+  + ++ + E A  LF+EM + G  P+R +++T+I    ++   D
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A     +ME   +  D   Y  LI+   K    ++A  +F R+  SGI P  V YN +I
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A    EA  L + MR +G +P   +++ L++ + +  K  EA  +   M +    
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +I     +    DA  L   M K    P+VV+ NTL+    +A    EA  +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       +VVTYNT++  + ++ + E+A  L+ +M  RG+ PN +TY+ +++   K
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
           A +L  A  +F +++SSG   +   Y  +I+ +   G V    +L  E+      P+ + 
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467

Query: 368 RETAITILARAGRIEEATWVFRQA 391
             T    L ++GR   A  + R+ 
Sbjct: 468 YGTLAAELCKSGRSARALEILREG 491



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 16/357 (4%)

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           MNE N   D  +  I+ID   +     DA  LF  +   G+ PS V+Y +L+     A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F +A  LF  M R+    + VTYN MI    K    E+A +L+++M   G  P+ +TY+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    K+ +++ A +LF ++   G   +   + T+I+   +   +  A ++ HE+   +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P   +  IL    A+AG++ EA  +F++  D+G       +  +I            +
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           E+F+ MRS G  P      ++++++ K  + + A  L   M ++G V  D V +  L + 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV-PDVVTYSTL-IS 298

Query: 481 G----ARKD--FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           G    AR D   ++LE + +R    + + +  L H +     +A R+ +A  +++ M
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC----KAGRIKEAREVLDAM 351


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 17/455 (3%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +    P++ A N+VL  +++  +++    ++ +M  RG +P+  TY TLI    ++
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G F  A     +M + ++   +V+Y+ LI      S  S+A S+F  +++SG++P+L  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           NTM++ + K    K+A  L +EM   G+ P+ V++  L++   +  + V A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                ++   N +ID Y +     +A  L   + K  I P V +Y+ L++     +   E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L + M++K    N VTYNT+I  Y K    EKA  +  +M  +GIEPN IT+ST+I 
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            + KAGK++ A  L+ ++   G+  D V Y  +I  + + G    A RL  E+++    P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 364 NTIPRETAITILARAGRIEEATWVF--RQAFDAGEVK----DISV-------FGCMIELF 410
           N       I  L + GRI +A  +F  +   D    K    D S+       +  +I+  
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             + +     + F  MR +G  PD     +++  +
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 183/401 (45%), Gaps = 18/401 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+++ YN ++    +    + A  L+ EM   G+ P+  T+  LI    K     SA  +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    V  ++ +Y+ LI+   K  + S+A+S+ S ++   I+PD+  Y+ +I     
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L++EM+++G  P+ V+Y+TL++ Y +     +A+ V ++M E     ++ T
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y +    + A  L+  M   G+ P VV+Y  L+  + +     EA  L + MQ
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 257 RKEIEQNVVTYNTMI-------------KIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +  NV T + +I             K++      +   +   E+      PN + Y+
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I      G++ +A+  F  +R SG+  D      +I  + R   +     L  ++ + 
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             IP  +   +LA+    EE+ ++ + A    E  D+S  G
Sbjct: 621 GIIPNSSVYRVLAKG--YEESGYL-KSALRCSE--DLSGIG 656



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 40/224 (17%), Positives = 94/224 (41%), Gaps = 22/224 (9%)

Query: 247 EAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +A+ LF  + R+ ++ +N   Y+ +I +   +  + KA  LM+++       N+      
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQ--CLQNSRRSRIC 109

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
            +++           +  +L SS  +  P ++  +I+A+  +GLV  A  + +++   + 
Sbjct: 110 CSVFN----------VLSRLESS--KFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DV 154

Query: 366 IPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +P   A  +    L + GR +    V+      G   ++  +G +I+   R   +     
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +F++M     FP   I  +++           A+ ++  M+  G
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 222/462 (48%), Gaps = 16/462 (3%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           + ++ ++ R  + + A  +FD     G   + + YS+LI  +G+ G    A+   + M+ 
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 184

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                +LV+Y+ +I+   K  DY  A+ IF  +   G+ PD + +NT+I+  G+A  ++E
Sbjct: 185 -VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMI 201
              +  EM E+G+  D V+Y+TL+  Y    +     ++   M + +     + T + MI
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D Y +L +A +A  LF  MR   ++P  + YNT++ ++     F EA  + R M+     
Sbjct: 304 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 363

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           +++VTYN ++  YGK  +  +A +L++EM+ RG  PN +TYS +I  + K G    A  L
Sbjct: 364 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 423

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
           FQ ++ +G++ D VLY T++    + G    A  LL E+     +PN I   + +    R
Sbjct: 424 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483

Query: 378 AGRIEEATWVFRQAFDAGEVKDI---SVFGCMIELFSRNKKYANVI---EVFEKMRSAGY 431
              +    +   + F    V  +   SV      L    +K A V+    VF +M   G 
Sbjct: 484 QCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGV 543

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            P+    + +LN+       E A  L   M+    VF  +V+
Sbjct: 544 KPNVVTFSSILNACSHCASVEDASSLLEAMR----VFDGRVY 581



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 209/404 (51%), Gaps = 25/404 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN V+    +   +  A  +F EM ++G++PDR T++TLI+  G+   ++     
Sbjct: 188 PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRI 247

Query: 77  LQQMEQDRVSGDLVLYSNLIEL-ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             +ME+  ++ D V Y+ LI    R    +  A  + +  KSSGI P ++ Y+TMI+ + 
Sbjct: 248 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYA 307

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  EA  L +EMR Q V+PD + Y+T+++++     F EA S+   M E     D+ 
Sbjct: 308 KLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIV 367

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D YG+    ++A  L   M++ G  P++++Y+ L+  Y +     +A+ LF+ +
Sbjct: 368 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 427

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  ++ +VV Y+T++    K+   ++A  L++EM + GI PN ITY++++  +G+   +
Sbjct: 428 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLM 487

Query: 316 DRAAMLFQKLR-----------SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
            R    F KLR              V+ D    Q+++   ++  LV  A R+  E+    
Sbjct: 488 VRKN--FPKLRFFLLPRVTMLLKPSVDYD---QQSLVDPKQKQALVLAAARVFREMAKNG 542

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +PN +   + +   +    +E+A+       +A  V D  V+G
Sbjct: 543 VKPNVVTFSSILNACSHCASVEDAS----SLLEAMRVFDGRVYG 582



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 198/422 (46%), Gaps = 50/422 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP    +N ++    RA +WE    +F EM +RGIA D  TY+TLI  + + G   
Sbjct: 218 EQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMH 277

Query: 72  SAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              + ++ M +   +   ++ YS +I+   KL    +AI++F  +++  + PD + YNTM
Sbjct: 278 LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTM 337

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +++  +   F EA  +   M E G   D V+Y+ LL+ Y +  KF EA+S+  EM +   
Sbjct: 338 VDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 397

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T + +ID Y +    +DA  LF  ++K G+ P VV Y+TL+    +     EA+ 
Sbjct: 398 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 457

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGK--------------------------SLEHEK-- 282
           L   M    I  NV+TYN+++  YG+                          S+++++  
Sbjct: 458 LLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQS 517

Query: 283 -------------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
                        A  + +EM   G++PN +T+S+I+        ++ A+ L + +R   
Sbjct: 518 LVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVFD 577

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +  V +  +++ + R+ +   A+ L +EL    T+   TA+        + +  W F 
Sbjct: 578 GRVYGVTH-GLLMGF-RIRVWRDAETLFNEL---TTLGHNTAVAFY---NALTDVLWHFE 629

Query: 390 QA 391
           QA
Sbjct: 630 QA 631



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 177/372 (47%), Gaps = 11/372 (2%)

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+I+  G+      A+L+ +     G   +   YS+L+  Y  + K  +A+ +F  M +
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 183

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           V C  +L   N +ID   +      A R+F  M + G+ P  +++NTL+   G A  + E
Sbjct: 184 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTII 306
              +F  M+ + I ++ VTYNT+I  Y +  +      LM+ M ++ GIEP+ ITYST+I
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP--- 363
             + K G    A  LFQ++R+  VE D + Y TM+  + R+G    A  +   + +    
Sbjct: 304 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 363

Query: 364 -NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            + +     +    + G+  EA  +  +    G   +I  +  +I+ + ++  + + + +
Sbjct: 364 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 423

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG- 481
           F+ ++ AG  PD  + + +++   K    + A  L  EM + G   +   +  +L  YG 
Sbjct: 424 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483

Query: 482 ----ARKDFNML 489
                RK+F  L
Sbjct: 484 QCLMVRKNFPKL 495



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 157/296 (53%), Gaps = 6/296 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
             A+++ + + +   PSV  Y+ ++    +      A  LF EMR + + PD   Y+T++
Sbjct: 279 GAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMV 338

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G FD A S  + ME+   + D+V Y+ L++   K   + +A+S+   +K  G  
Sbjct: 339 DIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGAS 398

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y+ +I+ + K    ++A  L +++++ G++PD V YSTL++   +N    EAL++
Sbjct: 399 PNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL 458

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQ--LDMAKDADRL-FWSMRK--MGIDPSV-VSYNTL 235
             EM +     ++ T N ++D YG+  L + K+  +L F+ + +  M + PSV     +L
Sbjct: 459 LEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSL 518

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           +    +  L   A  +FR M +  ++ NVVT+++++         E A++L++ M+
Sbjct: 519 VDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMR 574



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 31/299 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I   G+L  +  A  +F      G   +V  Y++L+  YG +    +A+ +F  M +
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 183

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              + N+V YN +I    K  ++  A  + +EM  +G+ P+ IT++T+I+  G+A + + 
Sbjct: 184 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
              +F ++   G+  D V Y T+I  Y R G +     L+           ET    +A+
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM-----------ET----MAK 288

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           +  IE +               +  +  MI+ +++       I +F++MR+    PD   
Sbjct: 289 SSGIEPS---------------VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              +++ + +L  F+ A  +   M+E G       +  +L  YG +  F    SL E +
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEM 392



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 117/274 (42%), Gaps = 10/274 (3%)

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           +T+I   G+    + A  +       G   N   YS++I  +G++GKL +A  +F+ ++ 
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK- 183

Query: 328 SGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
             V   P  V+Y  +I A  + G    A R+  E+ +    P+ I   T I+   RA R 
Sbjct: 184 --VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRW 241

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM-RSAGYFPDSHIIAL 440
           EE   +F +  + G  +D   +  +I  + R  +      + E M +S+G  P     + 
Sbjct: 242 EECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYST 301

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           +++ Y KL     A  L+ EM+ +        +  M+ ++    +F+   S+   ++   
Sbjct: 302 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 361

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                  ++ +   Y +  +  +A  ++  M +R
Sbjct: 362 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 395


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 207/455 (45%), Gaps = 34/455 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V AYN ++     A Q + A  L  EM    + PD YTY+TLI      G   +
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 176

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++ L +M + R   D+V Y+ L+E   K S Y +A+ +   ++  G  PD+V YN ++N
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A   ++ +   G +P+TVSY+ +L       ++ +A  +  EM +  CP 
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T N++I    +  + + A  +   + K G  P+ +SYN LL  + + +   +A+   
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  +    ++V+YNT++    +S E + A  L+ +++++G  P  I+Y+T+I    KA
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A  L  ++ S G++ D + Y T+                                
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAG----------------------------- 447

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R  RIE+A   F +  D G   +  ++  +I    + ++  + I++F  M   G  
Sbjct: 448 --LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P+     +++         + A DL  E+   G V
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 6/357 (1%)

Query: 122 PDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           PD   YNT+I  + G+ +      +L E +R + V PD V+Y+ LL    +   + +A+ 
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMK 214

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM +  C  D+ T N++++   Q     DA     ++   G +P+ VSYN +L+   
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            AE + +A  L   M +K    NVVT+N +I    +    E A  +++++   G  PN++
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +Y+ ++  + K  K+D+A      + S G   D V Y T++ A  R G V  A  LLH+L
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           +     P  I   T I  L +AG+ +EA  +  +    G   DI  +  +     R  + 
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            + I  F K++  G  P++ +   ++    K RE  +A DL++ M   GC+ ++  +
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 511


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/547 (23%), Positives = 247/547 (45%), Gaps = 21/547 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +LD + E+    PS  +Y  ++  +   K   LA+ L ++M   G+ P+   YSTL
Sbjct: 133 RALELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +  EG  + A   L  M    V+ D+  Y+ +I    K     +A +    ++  G+
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 251

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V +   I  + K     EA    +EM + G+ P+   Y+ L+N + +    +EALS
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F  ++ +    D+ TC+  I    +    ++A ++F  +++ G+ P V +Y++L+  + 
Sbjct: 312 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     +A  L   M  K I  N+  YN ++    KS + ++A  L   M  +G+EP+++
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYST+I  + K+  +  A  LF ++ S GV+    +Y  ++    + G +  A  L  E+
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491

Query: 361 RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI---------- 407
            Q     T+   T I    ++ +I+EA+ +F++      + D   +  +I          
Sbjct: 492 LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 551

Query: 408 -------ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                  E+  RN     V  +FEKM + G  PD     LV+ ++ K      A  L  E
Sbjct: 552 EANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           +  +G +    +H  +++    R+D      L + +              +   +  A +
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671

Query: 521 LNDASRI 527
           +++A+R+
Sbjct: 672 MDEATRV 678



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 248/573 (43%), Gaps = 59/573 (10%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++  YNV++  + +  + E A  +   M   G  P+  T+  LI  + +E     A+  L
Sbjct: 79  NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +ME+  +    V Y  +I       D S A  +  ++  SG+ P++V Y+T+I  +   
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 198

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EAR L++ M   GV PD   Y+ +++   +  K  EA +   E+       D  T 
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL--- 254
              I  Y +     +A + F  M   G+ P+   Y  L+  + +A    EA+ +FR    
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 255 --------------------------------MQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
                                           ++ K +  +V TY+++I  + K  E EK
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 378

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L  EM  +GI PN   Y+ ++    K+G + RA  LF  +   G+E D V Y TMI 
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 343 AYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            Y +   VA A  L HE+     QP++      +    + G +E+A  +FR+    G   
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 498

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +S F  +I+ + ++ K     ++F++M +    PD      V++ + K  + E A+ L+
Sbjct: 499 TLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557

Query: 459 SEMQEEGCVF----------------SDQVHFQMLSLYGARKDFNMLES--LFERLDSDS 500
            EMQE   +                  D+V + ++ +Y   K+ N++E+  L + +    
Sbjct: 558 KEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLV-IYAHCKEDNLVEAFKLRDEVVGKG 616

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            + K  +H ++     +   L +AS++++ M +
Sbjct: 617 MLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 227/495 (45%), Gaps = 57/495 (11%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F YN ++  + +A + E A     E++ RG+ PD  T+   I  + K G    A  
Sbjct: 217 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +  +M    +  +  LY+ LI    K  +  +A+SIF  L + G++PD+   +  I+   
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 336

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA  +  E++E+G+ PD  +YS+L++ + +  +  +A  +  EM       ++ 
Sbjct: 337 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 396

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N ++D   +    + A +LF  M + G++P  V+Y+T++  Y ++E   EA  LF  M
Sbjct: 397 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456

Query: 256 QRKEIEQN----------------------------------VVTYNTMIKIYGKSLEHE 281
             K ++ +                                   +++NT+I  Y KS + +
Sbjct: 457 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 516

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF-----------------QK 324
           +A+ L QEM  + I P+ +TY+T+I    KAGK++ A +LF                 +K
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGR 380
           + + GV+ D V Y  +I A+ +   +  A +L  E+     + + T     IT L +   
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 636

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           + EA+ +  +  + G    ++    ++  F    K      VFE ++S G  PD+  +  
Sbjct: 637 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 696

Query: 441 VLNSYGKLREFETAD 455
           ++N  G L + ++ D
Sbjct: 697 LVN--GNLNDTDSED 709



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 207/486 (42%), Gaps = 39/486 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y ++   + RAK+   A   F+EM++ G+ PD    S LI  F +EG        
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG-------- 59

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                                      D  + + I   + S GI  +L+ YN +I+   K
Sbjct: 60  ---------------------------DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 92

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  +++ M   G KP++ ++  L+  Y   H    AL +  EM + N      +
Sbjct: 93  FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 152

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              MI+          A++L   M   G+ P+VV Y+TL+  Y       EA  L   M 
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 212

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  ++  YN +I    K+ + E+A+  + E+Q RG++P+A+T+   I  + K GK+ 
Sbjct: 213 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
            AA  F ++   G+  +  LY  +I  + + G +  A  +   L     +P     +   
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR++EA  VF +  + G V D+  +  +I  F +  +     E+ ++M   G  
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+  I   +++   K  + + A  L+  M E+G       +  M+  Y   ++     SL
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 493 FERLDS 498
           F  + S
Sbjct: 453 FHEMPS 458



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 39/386 (10%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+VP+   Y  +     +AK   EA+L  EEM++ G+KPD  + S L++ ++      E 
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +   M     P++L T N++I    +    + A  +   M  +G  P+  ++  L+  
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 239 YGEAELFGEAIHLFRLMQRKE-----------------------------------IEQN 263
           Y      G A+ L   M+++                                    ++ N
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VV Y+T+I  Y      E+A  L+  M   G+ P+   Y+ II+   KAGK++ A+    
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAG 379
           +++  G++ D V +   I+ Y + G +  A +   E+     +P     T+L     +AG
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
            + EA  +FR     G + D+      I    +N +    ++VF +++  G  PD    +
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 440 LVLNSYGKLREFETADDLYSEMQEEG 465
            +++ + K  E E A +L+ EM  +G
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKG 390



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 146/320 (45%), Gaps = 4/320 (1%)

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E+G+ P+T +Y+ +        +  EA   F EM +     D   C+ +ID + +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +  R+   M   GI  ++++YN L+    +     +A  + + M     + N  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I+ Y +     +A  L+ EM+ R + P+A++Y  +I        L  A  L +K+  SG
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           ++ + V+Y T+I+ Y   G +  A+RLL  +      P+       I+ L++AG++EEA+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
               +    G   D   FG  I  +S+  K     + F++M   G  P++ +  +++N +
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 446 GKLREFETADDLYSEMQEEG 465
            K      A  ++  +   G
Sbjct: 301 FKAGNLMEALSIFRHLHALG 320


>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 989

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 236/481 (49%), Gaps = 9/481 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N ++    +A +   A  LF EM + G+  D  T++T+I   G  G    A S L++ME
Sbjct: 305 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 364

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +S D   Y+ L+ L     D   A+  +  ++  G+ PD V +  ++++  + K+  
Sbjct: 365 EKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQRKMVA 424

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  ++ EM    ++ D  S   ++ +YV      +A ++F E  +++C L  TT   ++
Sbjct: 425 EAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALF-ERFQLDCVLSSTTLAAVM 483

Query: 202 DVYGQLDMAKDADRLFWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           DVY +  +  +A+ +F+  R M G    V+ YN +++ YG+A+L  +A+ +F+ M+ +  
Sbjct: 484 DVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQGT 543

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +  TYN++I++       + A  ++ EM + G +P   TY+ +IA + + G L  A  
Sbjct: 544 WPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVD 603

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILA 376
           L++ ++ +GV+ + V+Y ++I  +   G+V  A    K +     Q N I   + I   +
Sbjct: 604 LYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYS 663

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA  V+ +  D+G   D++    M+ L +     +    +F  +R  G   D  
Sbjct: 664 KVGCLEEARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKGTC-DVI 722

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNMLESLFER 495
             A ++  Y  +   + A ++  EM+E G +  D   F Q+L+ Y A         LF  
Sbjct: 723 SFATMMYLYKGMGMLDEAIEVAEEMRESG-LLRDCTSFNQVLACYAADGQLRECCELFHE 781

Query: 496 L 496
           +
Sbjct: 782 M 782



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 221/448 (49%), Gaps = 18/448 (4%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           T++TLI  +GK G  + A +   +M +  V  D V ++ +I         S+A S+  ++
Sbjct: 304 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 363

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           +  GI PD   YN ++++   A   + A      +R+ G+ PDTV++  +L++  +    
Sbjct: 364 EEKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQRKMV 423

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EA +V AEM+  +  +D  +  +++ +Y    +   A  LF    +  +D  V+S  TL
Sbjct: 424 AEAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALF---ERFQLD-CVLSSTTL 479

Query: 236 ---LRVYGEAELFGEAIHLFRLMQRKEIEQN-VVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
              + VY E  L+ EA  +F   +    ++N V+ YN MIK YGK+  HEKA ++ + M+
Sbjct: 480 AAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMK 539

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
           N+G  P+  TY+++I +      +D A  +  ++  SG +     Y  +I +Y R+GL++
Sbjct: 540 NQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLS 599

Query: 352 HAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A  L   ++    +PN +   + I   A +G +EEA   F+   + G   +  V   +I
Sbjct: 600 DAVDLYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLI 659

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + +S+         V++KM+ +G  PD      +L+    L     A+ ++++++E+G  
Sbjct: 660 KAYSKVGCLEEARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKGTC 719

Query: 468 FSDQVHF-QMLSLYGARKDFNMLESLFE 494
             D + F  M+ LY   K   ML+   E
Sbjct: 720 --DVISFATMMYLY---KGMGMLDEAIE 742



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 232/556 (41%), Gaps = 43/556 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +  VL  + + K    A  +  EM +  I  D ++   ++  +  EG+   A + 
Sbjct: 405 PDTVTHRAVLHILCQRKMVAEAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKAL 464

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ + D V     L + +   A K          + +   +G   D++ YN MI  +GK
Sbjct: 465 FERFQLDCVLSSTTLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGK 524

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AKL ++A  + + M+ QG  PD  +Y++L+ +        +A  + AEM +  C     T
Sbjct: 525 AKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKT 584

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  Y +L +  DA  L+ +M+K G+ P+ V Y +L+  + E+ +  EAI  F+LM+
Sbjct: 585 YAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLME 644

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N +   ++IK Y K    E+A  +  +M++ G  P+    ++++++    G + 
Sbjct: 645 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVS 704

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--------- 367
            A  +F  LR  G   D + + TM+  Y+ +G++  A  +  E+R+   +          
Sbjct: 705 EAESIFNDLREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLRDCTSFNQVL 763

Query: 368 ---------RE----------------------TAITILARAGRIEEATWVFRQAFDAGE 396
                    RE                      T  T+L + G   EA    + A++  E
Sbjct: 764 ACYAADGQLRECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVAQLQTAYN--E 821

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
            K ++       LFS    YA  +E  +++       + +    V+ +Y    + + A  
Sbjct: 822 AKPLATPAITATLFSAMGLYAYALESCQELTRDEIPREHYAYNAVIYTYSASGDIDMALK 881

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
            Y  MQE+G          ++ +YG       ++ +  RL        + L   V   Y 
Sbjct: 882 TYMRMQEKGLEPDVVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPNQSLFKAVRDAYV 941

Query: 517 RANRLNDASRIMNRMN 532
            ANR + A  +   M+
Sbjct: 942 SANRQDLADVVKKEMS 957



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 124/566 (21%), Positives = 244/566 (43%), Gaps = 43/566 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R + +  +      Y P+V  YN+VLR + RA +W+     + EM   G+ P   TY  L
Sbjct: 121 RVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGML 180

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  +GK G+   A+ W++ M Q     D V  + ++ + +   ++ +A   F    +  +
Sbjct: 181 VDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKV 240

Query: 121 ------------VPDLVAYNTMINV--FGKAKLFK-EARLLIEEMREQGVKPD------- 158
                        P   +  + +N+  F   +LFK  AR  IE+        D       
Sbjct: 241 NLDDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPR 300

Query: 159 -TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
            T +++TL++LY +  +  +A ++F+EM +   P+D  T N MI   G      +A+ L 
Sbjct: 301 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 360

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M + GI P   +YN LL ++ +A     A+  +R +++  +  + VT+  ++ I  + 
Sbjct: 361 KKMEEKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQR 420

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
               +A  +M EM    I  +  +   I+ ++   G + +A  LF++      ++D VL 
Sbjct: 421 KMVAEAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERF-----QLDCVLS 475

Query: 338 QTMIVA----YERVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVF 388
            T + A    Y   GL   A+ + +  R     + + +     I    +A   E+A  +F
Sbjct: 476 STTLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIF 535

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           +   + G   D   +  +I++ +      +   +  +M  +G  P     A ++ SY +L
Sbjct: 536 KGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRL 595

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
                A DLY  M++ G   ++ V+  +++ +    +  M+E   +          +  H
Sbjct: 596 GLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFA---ESGMVEEAIQYFKLMEEHGVQSNH 652

Query: 509 HVVAGI---YERANRLNDASRIMNRM 531
            V+  +   Y +   L +A R+ ++M
Sbjct: 653 IVLTSLIKAYSKVGCLEEARRVYDKM 678



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 27/201 (13%)

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           H+   PN I     +  L RAG+ +E    + +    G +   + +G +++++ +     
Sbjct: 132 HQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVK 191

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS------------------ 459
             +   + M    +FPD   +A V+  +    EF+ AD  +                   
Sbjct: 192 EALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVNLDDLDLDSID 251

Query: 460 EMQEEGCVFSDQVHFQMLSL----YGARKDFNMLESLFERLDSDSNINKKEL---HHVVA 512
           +  + G   S     Q LS+     GAR      +SL     SDS+  K  L    + + 
Sbjct: 252 DFPKNGSAQSPVNLKQFLSMELFKVGARNPIE--KSLHFASGSDSSPRKPRLTSTFNTLI 309

Query: 513 GIYERANRLNDASRIMNRMNK 533
            +Y +A RLNDA+ + + M K
Sbjct: 310 DLYGKAGRLNDAANLFSEMLK 330


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 240/523 (45%), Gaps = 44/523 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+++ YN+++    R  + ELA  +F  + + G+ PD  +Y+TLI  F KEG  D    
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVD---- 174

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                                          KA  +F ++    + PD+V YN++I+   
Sbjct: 175 -------------------------------KAYELFYKMIEQSVSPDVVTYNSLIDGLC 203

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K   ++  ++E+M + G++P+  +Y++L+  Y     + E++ VF EM+       + 
Sbjct: 204 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 263

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN  I    + +  K+A  +F SM   G  P+++SY+TLL  Y     F     L  LM
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N   +N +I  Y +    +KA  + ++MQN+G+ P+ +T++T+I+   + G+L
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-----ET 370
           D A   F  +   GV     +Y+ +I      G +  AK L+ E+   +  P       +
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 443

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR+ E   +       G+  ++  F  ++E +           + + M S G
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNM 488
             P+ +I   +++ Y K    + A  ++ +M  +G V    V + ++   L+ AR+    
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG-VKPTSVLYNIILHGLFQARRTTAA 562

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            +   E ++S + ++  + + VV G   R N  ++A+ ++ ++
Sbjct: 563 KKMFHEMIESGTTVS-IQTYGVVLGGLCRNNCTDEANMLLEKL 604



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/503 (23%), Positives = 223/503 (44%), Gaps = 58/503 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP V  YN ++  + + K+   +  + ++M   GI P+  TY++LI  +   GM+ 
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWK 244

Query: 72  SAISWLQQME--------------------QDRVS---------------GDLVLYSNLI 96
            ++   ++M                      +R+                 +++ YS L+
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLL 304

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                   ++   S+ + + S GIVP+   +N +IN + +  +  +A L+ E+M+ +G+ 
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMI 364

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP--------LDLTTCNIMIDVYGQLD 208
           PDTV+++T+++      +  +AL  F  M ++  P        L    CN     +G+L 
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN-----HGELV 419

Query: 209 MAKDADRLFWSMRKMGIDPSVVSY--NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
            AK+   L   M    I P  V Y  + +  ++ E  +  E   +  LM +     NVVT
Sbjct: 420 KAKE---LISEMMNKDIPPPGVKYFSSIINNLFKEGRV-AEGKDIMDLMVQTGQRPNVVT 475

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +N++++ Y      E+A  L+  M + GIEPN   Y T++  + K G++D A  +F+ + 
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETAITIL---ARAGRIE 382
             GV+   VLY  ++    +      AK++ HE+     T+  +T   +L    R    +
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTD 595

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +  + F      DI  F  +I    +  +     E+F  + + G  P  H   L++
Sbjct: 596 EANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMI 655

Query: 443 NSYGKLREFETADDLYSEMQEEG 465
           ++  K   +E AD+L+  +++ G
Sbjct: 656 SNLIKEESYEEADNLFISVEKSG 678



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/442 (21%), Positives = 188/442 (42%), Gaps = 8/442 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +Y+ +L        +   + L + M  +GI P+   ++ LI  + + GM D A+  
Sbjct: 295 PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M+   +  D V ++ +I    ++     A+  F+ +   G+ P    Y  +I     
Sbjct: 355 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                +A+ LI EM  + + P  V Y S+++N   +  +  E   +   M +     ++ 
Sbjct: 415 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVV 474

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +++ Y  +   ++A  L  +M  +GI+P+   Y TL+  Y +     +A+ +FR M
Sbjct: 475 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 534

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K ++   V YN ++    ++     A  +  EM   G   +  TY  ++    +    
Sbjct: 535 LHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCT 594

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
           D A ML +KL +  V+ D + +  +I A  +VG    AK L   +     +P        
Sbjct: 595 DEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLM 654

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN---KKYANVIEVFEKMRS 428
           I+ L +    EEA  +F     +G   D  +   ++ +  +     K +N + + ++   
Sbjct: 655 ISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNL 714

Query: 429 AGYFPDSHIIALVLNSYGKLRE 450
                   ++A + +  GK RE
Sbjct: 715 TLEASTISLLASLFSREGKCRE 736


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 7/445 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PSV+  N +L +V+++ +         EM +R I PD  T++ LI     EG F+ + 
Sbjct: 194 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 253

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +Q+ME+   +  +V Y+ ++    K   +  AI +   +KS G+  D+  YN +I+  
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            ++    +  LL+ +MR++ + P+ V+Y+TL+N +    K + A  +  EM       + 
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID +      K+A ++F+ M   G+ PS VSY  LL    +   F  A   +  
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+R  +    +TY  MI    K+   ++A  L+ EM   GI+P+ +TYS +I  + K G+
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRET 370
              A  +  ++   G+  + ++Y T+I    R+G +  A R    ++ E    +      
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T L +AG++ EA    R     G + +   F C+I  +  + +      VF++M   G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613

Query: 431 YFPDSHIIALVLNSY---GKLREFE 452
           + P       +L      G LRE E
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAE 638



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 212/454 (46%), Gaps = 6/454 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSV  Y++++R  LR    + +  +F  M   G  P  YT + ++    K G   S  S
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M + ++  D+  ++ LI +      + K+  +  +++ SG  P +V YNT+++ + 
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   FK A  L++ M+ +GV  D  +Y+ L++    +++  +   +  +M +     +  
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I+ +        A +L   M   G+ P+ V++N L+  +     F EA+ +F +M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +  + V+Y  ++    K+ E + A      M+  G+    ITY+ +I    K G L
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A +L  ++   G++ D V Y  +I  + +VG    AK ++  + +    PN I   T 
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G ++EA  ++      G  +D   F  ++    +  K A   E    M S G 
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++     ++N YG   E   A  ++ EM + G
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/594 (22%), Positives = 252/594 (42%), Gaps = 77/594 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--------------------- 49
           E++ Y+P++  YN VL    +  +++ A  L D M+ +G                     
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319

Query: 50  --------------IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
                         I P+  TY+TLI  F  EG    A   L +M    +S + V ++ L
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+      ++ +A+ +F  +++ G+ P  V+Y  +++   K   F  AR     M+  GV
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
               ++Y+ +++   +N    EA+ +  EM++     D+ T + +I+ + ++   K A  
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499

Query: 216 LFWSMRKMGIDPSVVSYNTL-------------LRVY----------------------G 240
           +   + ++G+ P+ + Y+TL             +R+Y                       
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EA    R M    I  N V+++ +I  YG S E  KA ++  EM   G  P   
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY +++    K G L  A    + L +    +D V+Y T++ A  + G +A A  L  E+
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNKK 415
            Q    P++    + I+ L R G+   A    ++A   G V    V + C ++   +  +
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   I   E+M + G+ PD      +++ Y ++ + E  +DL  EM  +    +   +  
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANRLNDASRIM 528
           +L  Y  RKD +    L+  +  +  + +K   H +V GI E +N L    +I+
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE-SNMLEIGLKIL 852



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 206/483 (42%), Gaps = 33/483 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ E    +PS  +Y V+L  + +  +++LA G +  M++ G+   R TY+ +I    K 
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A+  L +M +D +  D+V YS LI    K+  +  A  I  R+   G+ P+ + Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+I    +    KEA  + E M  +G   D  +++ L+    +  K  EA      M  
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                +  + + +I+ YG       A  +F  M K+G  P+  +Y +LL+   +     E
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A    + +       + V YNT++    KS    KA +L  EM  R I P++ TY+++I+
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              + GK   A +  ++  + G  +                              PN + 
Sbjct: 697 GLCRKGKTVIAILFAKEAEARGNVL------------------------------PNKVM 726

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +  + +AG+ +   +   Q  + G   DI     MI+ +SR  K     ++  +M 
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           +    P+     ++L+ Y K ++  T+  LY  +   G +  D++    L L     + N
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHSLVL--GICESN 843

Query: 488 MLE 490
           MLE
Sbjct: 844 MLE 846



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 191/453 (42%), Gaps = 9/453 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   Y+ ++ N  R    + A  +++ M   G   D +T++ L+T   K G    A  
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +++ M  D +  + V +  LI       +  KA S+F  +   G  P    Y +++    
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA   ++ +       DTV Y+TLL    ++    +A+S+F EM + +   D  
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMR---KMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +I   G     K    + ++     +  + P+ V Y   +    +A  +   I+  
Sbjct: 690 TYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       ++VT N MI  Y +  + EK  +L+ EM N+   PN  TY+ ++  + K 
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETA 371
             +  + +L++ +  +G+  D +   ++++      ++    ++L   + +   + R T 
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867

Query: 372 ITILARAGRIEEATWVF---RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             ++++     E  W F   +     G   D      M+ + +RN ++     V  +M  
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            G  P+S     ++N   ++ + +TA  +  EM
Sbjct: 928 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/430 (20%), Positives = 180/430 (41%), Gaps = 10/430 (2%)

Query: 3    VAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +AIL     EAR +  P+   Y   +  + +A QW+      ++M   G  PD  T + +
Sbjct: 706  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I  + + G  +     L +M       +L  Y+ L+    K  D S +  ++  +  +GI
Sbjct: 766  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            +PD +  ++++    ++ + +    +++    +GV+ D  +++ L++    N +   A  
Sbjct: 826  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885

Query: 181  VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            +   M  +   LD  TC+ M+ V  +    +++  +   M K GI P    Y  L+    
Sbjct: 886  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945

Query: 241  EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                   A  +   M   +I    V  + M++   K  + ++AT L++ M    + P   
Sbjct: 946  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005

Query: 301  TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            +++T++ +  K G +  A  L   + + G+++D V Y  +I      G +A A  L  E+
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065

Query: 361  RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV--KDISVFGCMIELFSRNKKYAN 418
            +    +   T    L R     E       AF   ++  KD+   G +  +      + N
Sbjct: 1066 KGDGFLANATTYKALIRGLLARET------AFSGADIILKDLLARGFITSMSLSQDSHRN 1119

Query: 419  VIEVFEKMRS 428
            +    EK+++
Sbjct: 1120 LKMAMEKLKA 1129


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 7/445 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PSV+  N +L +V+++ +         EM +R I PD  T++ LI     EG F+ + 
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +Q+ME+   +  +V Y+ ++    K   +  AI +   +KS G+  D+  YN +I+  
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            ++    +  LL+ +MR++ + P+ V+Y+TL+N +    K + A  +  EM       + 
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID +      K+A ++F+ M   G+ PS VSY  LL    +   F  A   +  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+R  +    +TY  MI    K+   ++A  L+ EM   GI+P+ +TYS +I  + K G+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRET 370
              A  +  ++   G+  + ++Y T+I    R+G +  A R    ++ E    +      
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T L +AG++ EA    R     G + +   F C+I  +  + +      VF++M   G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 431 YFPDSHIIALVLNSY---GKLREFE 452
           + P       +L      G LRE E
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAE 598



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 212/454 (46%), Gaps = 6/454 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSV  Y++++R  LR    + +  +F  M   G  P  YT + ++    K G   S  S
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M + ++  D+  ++ LI +      + K+  +  +++ SG  P +V YNT+++ + 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   FK A  L++ M+ +GV  D  +Y+ L++    +++  +   +  +M +     +  
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I+ +        A +L   M   G+ P+ V++N L+  +     F EA+ +F +M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +  + V+Y  ++    K+ E + A      M+  G+    ITY+ +I    K G L
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A +L  ++   G++ D V Y  +I  + +VG    AK ++  + +    PN I   T 
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G ++EA  ++      G  +D   F  ++    +  K A   E    M S G 
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++     ++N YG   E   A  ++ EM + G
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 253/594 (42%), Gaps = 77/594 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--------------------- 49
           E++ Y+P++  YN VL    +  +++ A  L D M+ +G                     
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 50  --------------IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
                         I P+  TY+TLI  F  EG    A   L +M    +S + V ++ L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+      ++ +A+ +F  +++ G+ P  V+Y  +++   K   F  AR     M+  GV
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
               ++Y+ +++   +N    EA+ +  EM++     D+ T + +I+ + ++   K A  
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 216 LFWSMRKMGIDPSVVSYNTL-------------LRVY----------------------G 240
           +   + ++G+ P+ + Y+TL             +R+Y                       
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EA    R M    I  N V+++ +I  YG S E  KA ++  EM   G  P   
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY +++    K G L  A    + L +    +D V+Y T++ A  + G +A A  L  E+
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKK 415
            Q    P++    + I+ L R G+   A    ++A   G V  +  ++ C ++   +  +
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   I   E+M + G+ PD      +++ Y ++ + E  +DL  EM  +    +   +  
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANRLNDASRIM 528
           +L  Y  RKD +    L+  +  +  + +K   H +V GI E +N L    +I+
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE-SNMLEIGLKIL 812



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 206/483 (42%), Gaps = 33/483 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ E    +PS  +Y V+L  + +  +++LA G +  M++ G+   R TY+ +I    K 
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A+  L +M +D +  D+V YS LI    K+  +  A  I  R+   G+ P+ + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+I    +    KEA  + E M  +G   D  +++ L+    +  K  EA      M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                +  + + +I+ YG       A  +F  M K+G  P+  +Y +LL+   +     E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A    + +       + V YNT++    KS    KA +L  EM  R I P++ TY+++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              + GK   A +  ++  + G  +                              PN + 
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVL------------------------------PNKVM 686

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +  + +AG+ +   +   Q  + G   DI     MI+ +SR  K     ++  +M 
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           +    P+     ++L+ Y K ++  T+  LY  +   G +  D++    L L     + N
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHSLVL--GICESN 803

Query: 488 MLE 490
           MLE
Sbjct: 804 MLE 806



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 191/453 (42%), Gaps = 9/453 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   Y+ ++ N  R    + A  +++ M   G   D +T++ L+T   K G    A  
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +++ M  D +  + V +  LI       +  KA S+F  +   G  P    Y +++    
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA   ++ +       DTV Y+TLL    ++    +A+S+F EM + +   D  
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMR---KMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +I   G     K    + ++     +  + P+ V Y   +    +A  +   I+  
Sbjct: 650 TYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       ++VT N MI  Y +  + EK  +L+ EM N+   PN  TY+ ++  + K 
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETA 371
             +  + +L++ +  +G+  D +   ++++      ++    ++L   + +   + R T 
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 372 ITILARAGRIEEATWVF---RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             ++++     E  W F   +     G   D      M+ + +RN ++     V  +M  
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            G  P+S     ++N   ++ + +TA  +  EM
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/430 (20%), Positives = 180/430 (41%), Gaps = 10/430 (2%)

Query: 3    VAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +AIL     EAR +  P+   Y   +  + +A QW+      ++M   G  PD  T + +
Sbjct: 666  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I  + + G  +     L +M       +L  Y+ L+    K  D S +  ++  +  +GI
Sbjct: 726  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            +PD +  ++++    ++ + +    +++    +GV+ D  +++ L++    N +   A  
Sbjct: 786  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 181  VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            +   M  +   LD  TC+ M+ V  +    +++  +   M K GI P    Y  L+    
Sbjct: 846  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 241  EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                   A  +   M   +I    V  + M++   K  + ++AT L++ M    + P   
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 301  TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            +++T++ +  K G +  A  L   + + G+++D V Y  +I      G +A A  L  E+
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025

Query: 361  RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV--KDISVFGCMIELFSRNKKYAN 418
            +    +   T    L R     E       AF   ++  KD+   G +  +      + N
Sbjct: 1026 KGDGFLANATTYKALIRGLLARET------AFSGADIILKDLLARGFITSMSLSQDSHRN 1079

Query: 419  VIEVFEKMRS 428
            +    EK+++
Sbjct: 1080 LKMAMEKLKA 1089


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 202/428 (47%), Gaps = 8/428 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M +R ++PD ++Y  LI    K G  + A    Q++    V+   V Y++LI      + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +  A  +F+ +   G  P  V YN +I+   K  + +EA  LI++M E G  PD V+Y+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++   ++ +  EAL +F EM  + C  +  + N +I    Q      A ++F  M    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH--EK 282
           I P   SY  L+    +A    EA  LFR M    I  + VTYN  + I+G  L +  ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN--VVIHGMCLAYTLDE 238

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L + M+++G  P+  T++ +I    K GK+D A  L +++   G   D V Y T+I 
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298

Query: 343 AYERVGLVAHAKRLLHEL--RQ--PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
               +  V  A+ LL ++  RQ  P  + + T I  L +AGRI+EA  V      +G+  
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  ++    R  +     E+   M + G  P+      +++   K      A  ++
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418

Query: 459 SEMQEEGC 466
           ++M+  GC
Sbjct: 419 AQMKSSGC 426



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 210/466 (45%), Gaps = 40/466 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP  ++Y +++  + +A +   A  LF ++   G+ P    Y++LI        FD
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M +       V Y+ +I+ + K     +A  +  ++   G VPD+V YNT++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K+   +EA LL  EM   G  P+  S++T++    +  K  +A  VF EM   + P
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  +  I+ID   +     +A +LF  M   GI PS V+YN ++     A    EA+ L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA---- 307
           F+ M+ K    +  T+N +I  + K  + ++A  L++ M + G  P+ +TYST+I+    
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 308 -----------------------------IWG--KAGKLDRAAMLFQKLRSSGVEIDPVL 336
                                        I G  KAG++  A  +   + SSG   D V 
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 337 YQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y T++  + R G    A+ LL ++      PN +     ++ L +A R+ EA  VF Q  
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
            +G   ++  +  +I  F    +    +++F +M  AG  PD H++
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD-HVV 467



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 183/384 (47%), Gaps = 4/384 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V  YN V+  + ++ + E A  LF+EM + G  P+R +++T+I    ++   D
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A     +ME   +  D   Y  LI+   K    ++A  +F R+  SGI P  V YN +I
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A    EA  L + MR +G +P   +++ L++ + +  K  EA  +   M +    
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +I     +    DA  L   M K    P+VV+ NTL+    +A    EA  +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       +VVTYNT++  + ++ + E+A  L+ +M  RG+ PN +TY+ +++   K
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
           A +L  A  +F +++SSG   +   Y  +I+ +   G V    +L  E+      P+ + 
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467

Query: 368 RETAITILARAGRIEEATWVFRQA 391
             T    L ++GR   A  + R+ 
Sbjct: 468 YGTLAAELCKSGRSARALEILREG 491



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 170/357 (47%), Gaps = 16/357 (4%)

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           MNE N   D  +  I+ID   +     DA  LF  +   G+ PS V+Y +L+     A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F +A  LF  M R+    + VTYN +I    K    E+A +L+++M   G  P+ +TY+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    K+G+++ A +LF ++   G   +   + T+I+   +   +  A ++ HE+   +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P   +  IL    A+AG++ EA  +FR+  D+G       +  +I            +
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           E+F+ MRS G  P      ++++++ K  + + A  L   M ++G V  D V +  L + 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV-PDVVTYSTL-IS 298

Query: 481 G----ARKD--FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           G    AR D   ++LE + +R    + + +  L H +     +A R+ +A  +++ M
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC----KAGRIKEAREVLDAM 351


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 7/445 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PSV+  N +L +V+++ +         EM +R I PD  T++ LI     EG F+ + 
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +Q+ME+   +  +V Y+ ++    K   +  AI +   +KS G+  D+  YN +I+  
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            ++    +  LL+ +MR++ + P+ V+Y+TL+N +    K + A  +  EM       + 
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID +      K+A ++F+ M   G+ PS VSY  LL    +   F  A   +  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+R  +    +TY  MI    K+   ++A  L+ EM   GI+P+ +TYS +I  + K G+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRET 370
              A  +  ++   G+  + ++Y T+I    R+G +  A R    ++ E    +      
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T L +AG++ EA    R     G + +   F C+I  +  + +      VF++M   G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 431 YFPDSHIIALVLNSY---GKLREFE 452
           + P       +L      G LRE E
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAE 598



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 212/454 (46%), Gaps = 6/454 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSV  Y++++R  LR    + +  +F  M   G  P  YT + ++    K G   S  S
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M + ++  D+  ++ LI +      + K+  +  +++ SG  P +V YNT+++ + 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   FK A  L++ M+ +GV  D  +Y+ L++    +++  +   +  +M +     +  
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I+ +        A +L   M   G+ P+ V++N L+  +     F EA+ +F +M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +  + V+Y  ++    K+ E + A      M+  G+    ITY+ +I    K G L
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A +L  ++   G++ D V Y  +I  + +VG    AK ++  + +    PN I   T 
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G ++EA  ++      G  +D   F  ++    +  K A   E    M S G 
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++     ++N YG   E   A  ++ EM + G
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 135/594 (22%), Positives = 253/594 (42%), Gaps = 77/594 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--------------------- 49
           E++ Y+P++  YN VL    +  +++ A  L D M+ +G                     
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 50  --------------IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
                         I P+  TY+TLI  F  EG    A   L +M    +S + V ++ L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+      ++ +A+ +F  +++ G+ P  V+Y  +++   K   F  AR     M+  GV
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
               ++Y+ +++   +N    EA+ +  EM++     D+ T + +I+ + ++   K A  
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 216 LFWSMRKMGIDPSVVSYNTL-------------LRVYGEAELFG---------------- 246
           +   + ++G+ P+ + Y+TL             +R+Y    L G                
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 247 ------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                 EA    R M    I  N V+++ +I  YG S E  KA ++  EM   G  P   
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY +++    K G L  A    + L +    +D V+Y T++ A  + G +A A  L  E+
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKK 415
            Q    P++    + I+ L R G+   A    ++A   G V  +  ++ C ++   +  +
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +   I   E+M + G+ PD      +++ Y ++ + E  +DL  EM  +    +   +  
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANRLNDASRIM 528
           +L  Y  RKD +    L+  +  +  + +K   H +V GI E +N L    +I+
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE-SNMLEIGLKIL 812



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 206/483 (42%), Gaps = 33/483 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ E    +PS  +Y V+L  + +  +++LA G +  M++ G+   R TY+ +I    K 
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A+  L +M +D +  D+V YS LI    K+  +  A  I  R+   G+ P+ + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+I    +    KEA  + E M  +G   D  +++ L+    +  K  EA      M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                +  + + +I+ YG       A  +F  M K+G  P+  +Y +LL+   +     E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A    + +       + V YNT++    KS    KA +L  EM  R I P++ TY+++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              + GK   A +  ++  + G  +                              PN + 
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVL------------------------------PNKVM 686

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +  + +AG+ +   +   Q  + G   DI     MI+ +SR  K     ++  +M 
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           +    P+     ++L+ Y K ++  T+  LY  +   G +  D++    L L     + N
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHSLVL--GICESN 803

Query: 488 MLE 490
           MLE
Sbjct: 804 MLE 806



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 191/453 (42%), Gaps = 9/453 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   Y+ ++ N  R    + A  +++ M   G   D +T++ L+T   K G    A  
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +++ M  D +  + V +  LI       +  KA S+F  +   G  P    Y +++    
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA   ++ +       DTV Y+TLL    ++    +A+S+F EM + +   D  
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMR---KMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +I   G     K    + ++     +  + P+ V Y   +    +A  +   I+  
Sbjct: 650 TYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       ++VT N MI  Y +  + EK  +L+ EM N+   PN  TY+ ++  + K 
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETA 371
             +  + +L++ +  +G+  D +   ++++      ++    ++L   + +   + R T 
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 372 ITILARAGRIEEATWVF---RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             ++++     E  W F   +     G   D      M+ + +RN ++     V  +M  
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            G  P+S     ++N   ++ + +TA  +  EM
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/430 (20%), Positives = 180/430 (41%), Gaps = 10/430 (2%)

Query: 3    VAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +AIL     EAR +  P+   Y   +  + +A QW+      ++M   G  PD  T + +
Sbjct: 666  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I  + + G  +     L +M       +L  Y+ L+    K  D S +  ++  +  +GI
Sbjct: 726  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            +PD +  ++++    ++ + +    +++    +GV+ D  +++ L++    N +   A  
Sbjct: 786  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 181  VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            +   M  +   LD  TC+ M+ V  +    +++  +   M K GI P    Y  L+    
Sbjct: 846  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 241  EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                   A  +   M   +I    V  + M++   K  + ++AT L++ M    + P   
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 301  TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            +++T++ +  K G +  A  L   + + G+++D V Y  +I      G +A A  L  E+
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025

Query: 361  RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV--KDISVFGCMIELFSRNKKYAN 418
            +    +   T    L R     E       AF   ++  KD+   G +  +      + N
Sbjct: 1026 KGDGFLANATTYKALIRGLLARET------AFSGADIILKDLLARGFITSMSLSQDSHRN 1079

Query: 419  VIEVFEKMRS 428
            +    EK+++
Sbjct: 1080 LKMAMEKLKA 1089


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 203/425 (47%), Gaps = 13/425 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +     ++R   R  +   A  + + +   G  PD  TY+ +I+ + K G  ++A+S 
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L +M    VS D+V Y+ ++   R L D  K   A+ +  R+      PD++ Y  +I  
Sbjct: 195 LDRMS---VSPDVVTYNTIL---RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +      A  L++EMR++G  PD V+Y+ L+N   +  +  EA+    +M    C  +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA++L   M + G  PSVV++N L+       L G AI +  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +   + N ++YN ++  + K  + ++A   ++ M +RG  P+ +TY+T++    K G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K++ A  +  +L S G     + Y T+I    + G    A +LL E+R    +P+TI   
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + +  L+R G+++EA   F +    G   +   F  ++    ++++    I+    M + 
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548

Query: 430 GYFPD 434
           G  P+
Sbjct: 549 GCKPN 553



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 203/445 (45%), Gaps = 7/445 (1%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LR ++R  + E      + M   G  PD    +TLI  F + G    A   L+ +E    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             D++ Y+ +I    K  + + A+S+  R+  S   PD+V YNT++     +   K+A  
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           +++ M ++   PD ++Y+ L+     +     A+ +  EM +  C  D+ T N++++   
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     +A +    M   G  P+V+++N +LR       + +A  L   M RK    +VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T+N +I    +     +A +++++M   G +PN+++Y+ ++  + K  K+DRA    +++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
            S G   D V Y TM+ A  + G V  A  +L++L      P  I   T I  LA+AG+ 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +A  +  +        D   +  ++   SR  K    I+ F +    G  P++     +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525

Query: 442 LNSYGKLREFETADDLYSEMQEEGC 466
           +    K R+ + A D    M   GC
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGC 550



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 181/373 (48%), Gaps = 5/373 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +LD + +   Y P V  Y +++    R      A  L DEMR RG  PD  TY+ L
Sbjct: 222 QAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    KEG  D AI +L  M       +++ ++ ++        +  A  + + +   G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P +V +N +IN   +  L   A  ++E+M + G +P+++SY+ LL+ + +  K   A+ 
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
               M    C  D+ T N M+    +    +DA  +   +   G  P +++YNT++    
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A   G+AI L   M+ K+++ + +TY++++    +  + ++A     E +  GI PNA+
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLH 358
           T+++I+    K+ + DRA      + + G + +   Y  +I  +AYE  G+   A  LL+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE--GMAKEALELLN 578

Query: 359 ELRQPNTIPRETA 371
           EL     + + +A
Sbjct: 579 ELCNKGLMKKSSA 591



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 195/425 (45%), Gaps = 10/425 (2%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G  +    +L+ M       D++  + LI    +L    KA  I   L+ SG VPD++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN MI+ + KA     A  +++ M    V PD V+Y+T+L    ++ K  +A+ V   M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            + +C  D+ T  I+I+   +      A +L   MR  G  P VV+YN L+    +    
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EAI     M     + NV+T+N +++    +     A  L+ +M  +G  P+ +T++ +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR 361
           I    + G L RA  + +K+   G + + + Y  ++  + +   +  A    +R++    
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P+ +   T +T L + G++E+A  +  Q    G    +  +  +I+  ++  K    I+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ--MLSL 479
           + ++MR+    PD+   + ++    +  + + A   + E +  G +  + V F   ML L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGL 529

Query: 480 YGARK 484
             +R+
Sbjct: 530 CKSRQ 534


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 212/448 (47%), Gaps = 37/448 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +YN VL+ +  AK+W+    L  EM + G  P+  T++TLI    + G+F+     
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + DL +Y+ +I+   K   +  A  I SR+ S G+ P++V YNT++     
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ ++EA  L+ EM ++    D V+++ L++ + +N      + +  +M E  C  D+ T
Sbjct: 331 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 390

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  +M   G  P+ +SY  +L+    AE + +A  L   M 
Sbjct: 391 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK +
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 510

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   + + G+  + ++Y +M  A                               L+
Sbjct: 511 EALELLNVMINKGITPNTIIYSSMASA-------------------------------LS 539

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R GR ++   +F    DA    D +++  +I    +  +    I+ F  M S G  P+  
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 437 IIALV---LNSYGKLREFETADDLYSEM 461
              ++   L S G +RE   A DL SE+
Sbjct: 600 TYTILIRGLASEGLVRE---AQDLLSEL 624



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/532 (22%), Positives = 228/532 (42%), Gaps = 39/532 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y  ++R++        A  + DEM  RG A        ++    + G F SA+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           LQ +     + D    + ++    +     + + +  +L S G  PD+V+YN ++     
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK + +   L+ EM   G  P+  +++TL+     N  F +     ++M E  C  DL  
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A+ +   M   G+ P+VV YNT+L+    AE + EA  L   M 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +++   + VT+N ++  + ++   ++   L+++M   G  P+ ITY+T+I  + K G +D
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 317 RAAMLFQKLRSSGVE-----------------------------------IDPVLYQTMI 341
            A ML + + + G +                                    +PV + T+I
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 342 VAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               + GLV  A  LL ++      P+ I   T I  L +AG+ EEA  +     + G  
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +  ++  M    SR  +   +I++F+ ++ A    D+ +   V++S  K  E + A D 
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDF 585

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           ++ M   GC+ ++  +  ++    +       + L   L S   + K  + H
Sbjct: 586 FAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRH 637



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/484 (20%), Positives = 189/484 (39%), Gaps = 41/484 (8%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA----------------- 137
           L  L R L    +       L ++G    +VAYN MI  + +A                 
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106

Query: 138 ---------------KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
                           L  +A  +++EM  +G          +L        F  A+   
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
             ++   C LD   CN+++    +     +   L   +   G +P +VSYN +L+    A
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           + + +   L   M R     NV T+NT+I    ++   E+    + +M   G  P+   Y
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +TII    K G  + A  +  ++ S G++ + V Y T++           A+ LL E+ Q
Sbjct: 287 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 346

Query: 363 PNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
            +    +    IL     + G ++    +  Q  + G + D+  +  +I  F +      
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 406

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            + + + M + G  P++    +VL    +   +  A +L S M ++GC   + V F  L 
Sbjct: 407 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC-LPNPVTFNTLI 465

Query: 479 LYGARKDF--NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM-NKRR 535
            +  +K      +E L + L +  + +      V+ G+  +A +  +A  ++N M NK  
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMINKGI 524

Query: 536 TFNS 539
           T N+
Sbjct: 525 TPNT 528


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 200/405 (49%), Gaps = 5/405 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PSV AYN VL   L       A   FD M   G+AP+ YTY+ L+      G    A+
Sbjct: 152 YVPSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L+ M       ++V Y+ L+    +  +   A  +   ++  G+ P+LV +N+M+N  
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA   ++AR + +EM  +G+ PD VSY+TL+  Y +     EALSVFAEM +     D+
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +I V  +    + A  L   MR+ G+  + V++  L+  + +     +A+   R 
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++  I+ +VV YN +I  Y      ++A  L+ EM+ +G++P+ +TYSTII+ + K   
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHA--KRLLHELRQPNTIPRET 370
              A  L Q++   GV  D + Y ++I  +  E+    AH   K ++    QP+     +
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            I    + G +E A  +  +   AG + D+  +  +I   S++ +
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 194/443 (43%), Gaps = 54/443 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++  +N ++  + +A + E A  +FDEM + G+APD  +Y+TL+  + K G   
Sbjct: 253 EGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSH 312

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S   +M Q  +  D+V +++LI +  K  +  +A+++  +++  G+  + V +  +I
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K     +A L +  M++  +KP  V Y+ L+N Y                      
Sbjct: 373 DGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC--------------------- 411

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                      + G++D A++   L   M   G+ P VV+Y+T++  Y +      A  L
Sbjct: 412 -----------MVGRMDEARE---LLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M  K +  + +TY+++I++         A  L + M   G++P+  TY+++I    K
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G ++ A  L  K+  +GV  D V Y  +I    +      A++LL +L   + IP  T 
Sbjct: 518 EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK 577

Query: 372 ITILARA-------------------GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
              L                      G + EA  V++   D     D SV+  +I    R
Sbjct: 578 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCR 637

Query: 413 NKKYANVIEVFEKMRSAGYFPDS 435
                  +   ++M   G+ P+S
Sbjct: 638 AGNVMKALSFHKQMLQGGFAPNS 660



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 184/398 (46%), Gaps = 41/398 (10%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G VP ++AYN ++     A L   AR   + M   GV P+  +Y+ L+          EA
Sbjct: 151 GYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMA------------------------- 210
           LS+  +M    C  ++ T N ++  +   G++D A                         
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 211 -------KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
                  +DA ++F  M + G+ P  VSYNTL+  Y +A    EA+ +F  M +K I  +
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVT+ ++I +  K+   E+A  L+++M+ RG++ N +T++ +I  + K G LD A +  +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAG 379
            ++   ++   V Y  +I  Y  VG +  A+ LLHE+     +P+ +   T I+   +  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
               A  + +Q  + G + D   +  +I +    K+ ++   +F+ M   G  PD     
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            +++ + K    E+A  L+ +M + G V  D V + +L
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAG-VLPDVVTYSVL 546



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 12/329 (3%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A R F SM   G+ P+V +YN L+R         EA+ + R M+      NVVTYNT++ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + ++ E + A  L+  M+  G++PN +T+++++    KAGK++ A  +F ++   G+  
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D V Y T++  Y + G    A  +  E+ Q    P+ +   + I ++ +AG +E A  + 
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           RQ  + G   +   F  +I+ F +     + +     M+     P       ++N Y  +
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD----FNMLESLFERLDSDSNINK 504
              + A +L  EM+ +G       +  ++S Y    D    F + + + E+      I  
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473

Query: 505 KELHHVVAGIYERANRLNDASRIMNRMNK 533
             L  V+ G      RL+DA  +   M K
Sbjct: 474 SSLIRVLCG----EKRLSDAHVLFKNMIK 498



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 20/315 (6%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  PSV  YN ++       + + A  L  EM  +G+ PD  TYST+I+ + K    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            SA    QQM +  V  D + YS+LI +       S A  +F  +   G+ PD   Y ++
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    + A  L ++M + GV PD V+YS L+N   ++ + +EA  +  ++   + 
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHED- 570

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P+   T                 D L    RK  +     S   LL+ +    L  EA  
Sbjct: 571 PIPANT---------------KYDALMHCCRKAELK----SVLALLKGFCMKGLMNEADK 611

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +++ M  +    +   Y+ +I  + ++    KA +  ++M   G  PN+ +  ++I    
Sbjct: 612 VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLF 671

Query: 311 KAGKLDRAAMLFQKL 325
           + G +  A  + Q+L
Sbjct: 672 ENGMVVEADQVIQQL 686


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 234/498 (46%), Gaps = 39/498 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P  F+YNVV+  + R+ +   A  +FDEM   G+AP+R TY+T+I    K G  +
Sbjct: 187 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLE 246

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN--- 128
           +      QM  D    ++V Y+ L+    +     +  ++   + S  ++PD   Y+   
Sbjct: 247 AGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILF 306

Query: 129 ----------TMINVFGKA-----------------KLFKE-----ARLLIEEMREQGVK 156
                     TM+++F ++                  L K+     A+ + E +   G+ 
Sbjct: 307 DGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV 366

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P TV Y+TL+N Y +      A  +F +M   +   D  T N +I+   +L+M   A+ L
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 426

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M K G+DPSV ++NTL+  YG A    +   +   MQ+K I+ +V+++ +++K + K
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 486

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           + +  +A  ++ +M  + + PNA  Y++II  + ++G  ++A +L +K+++SGV    V 
Sbjct: 487 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVT 546

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    R   +  A+ L++ LR    +P+ +   T I+     G  ++A  + ++  
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G    +     ++   +   +  ++  ++++M      P S I  +++++Y +     
Sbjct: 607 KYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 666

Query: 453 TADDLYSEMQEEGCVFSD 470
               L  EM E+G  F D
Sbjct: 667 KVASLKKEMSEKGIAFDD 684



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/521 (20%), Positives = 230/521 (44%), Gaps = 41/521 (7%)

Query: 17  PSVFAYNVVLRNVL----------------------------RAKQWELAHGLFD----E 44
           PS+ + N++L ++L                            +  Q  +A G  D     
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 45  MRQRG-----IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
           +R+ G       PD ++Y+ +I    + G    A+    +M    V+ + + Y+ +I+  
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
            K  D      +  ++   G  P++V YN +++   +     E R L++EM    + PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +YS L +      +    LS+FAE  +    L   TC+I+++   +      A ++F  
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +   G+ P+ V YNTL+  Y +      A  +F  M+ + I  + +TYN +I    K   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             KA +L+ EM+  G++P+  T++T+I  +G AG+L++   +   ++  G++ D + + +
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 340 MIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++ A+ + G +  A  +L ++      PN     + I     +G  E+A  +  +  ++G
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               I  +  +++   R+ +     E+   +R+ G  PD      ++++     + + A 
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +L  EM + G   + +    ++S   +    + +E L++++
Sbjct: 600 ELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 120/250 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E++   PSV  +N ++     A Q E    +  +M+Q+GI  D  ++ +++  F K G  
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++ L  M    V+ +  +Y+++I+   +  D  +A+ +  ++K+SG+   +V YN +
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    ++    EA  LI  +R QG++PD VSY+T+++         +AL +  EMN+   
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L TC+ ++          D + L+  M    ++PS   Y  ++  Y   E   +   
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 251 LFRLMQRKEI 260
           L + M  K I
Sbjct: 671 LKKEMSEKGI 680



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 7/360 (1%)

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P L + N ++          + R     +   G +PDT +++ ++   V       AL+
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 181 VFAEM--NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           +   M  +E   P D  + N++I    +     DA ++F  M  MG+ P+ ++YNT++  
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +         L   M     + NVVTYN ++    ++   ++   LM EM +  + P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR--- 355
             TYS +     + G+      LF +    GV +       ++    + G VA AK+   
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 356 -LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            L+H    P T+   T I    +   +  A  +F Q        D   +  +I    + +
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
                 ++  +M  +G  P       ++++YG   + E    + S+MQ++G + SD + F
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG-IKSDVISF 477



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/321 (19%), Positives = 128/321 (39%), Gaps = 38/321 (11%)

Query: 183 AEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           A   EV  PL  L++CN++++    +    D    F  +   G  P   ++N +++    
Sbjct: 110 ACAGEVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVA 169

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A+ + R M R E                                     P+A +
Sbjct: 170 AGDLDVALAMLRRMGRSE---------------------------------GAPPPDAFS 196

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----L 357
           Y+ +IA   ++GK   A  +F ++   GV  + + Y TMI  + + G +    RL    L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           H+  +PN +     ++ L R GR++E   +  +      + D   +  + +  +R  +  
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            ++ +F +    G    ++  +++LN   K  +   A  ++  +   G V +  ++  ++
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376

Query: 478 SLYGARKDFNMLESLFERLDS 498
           + Y   +D      +FE++ S
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKS 397



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 2   SVAILD-WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +VAILD  I ++   +P+   YN ++   + +   E A  L ++M+  G++    TY+ L
Sbjct: 493 AVAILDDMIYKDV--APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    +    D A   +  +    +  D+V Y+ +I       D  KA+ +   +   GI
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P L   +T+++    A    +   L ++M  + V+P +  Y  +++ YV      +  S
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 181 VFAEMNEVNCPLDLT 195
           +  EM+E     D T
Sbjct: 671 LKKEMSEKGIAFDDT 685



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 68/148 (45%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S+  YN++L+ + R+ Q + A  L   +R +G+ PD  +Y+T+I+    +G  D A+ 
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ+M +  +   L     L+              ++ ++    + P    Y  M++ + 
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYS 163
           + +   +   L +EM E+G+  D    S
Sbjct: 661 RCENDSKVASLKKEMSEKGIAFDDTKRS 688


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 213/494 (43%), Gaps = 83/494 (16%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V  YN ++ ++ +A   E A  L  +M  RG  P+  TYS LI    K G  D
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 72  SAISWLQQMEQD---------------------------------------RVSGDLVLY 92
            A   +Q+M +                                        RVS D V +
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           S LI+   K     +A S+F  + + G VP+++ YN ++N   KA   + A  +IE M +
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +GV PD ++YS L++ + +  +  EAL +   M    C     T N+++           
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC-----TPNVLV----------- 288

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
                         P  V++N L+    +A  F +A  LF  M  K ++ +V+T+  +I 
Sbjct: 289 --------------PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              K+ + E A +++  M N G+ PN +TY+ ++    K+G+++ A    +++ SSG   
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D + Y +++ A  R      A +L+ EL+     P+T+     +  L ++G+ E+A  V 
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN---SY 445
            +    G   D   F        R+   A  +E+   + + G  PD+   + +L+     
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRS 514

Query: 446 GKL-------REFE 452
           GKL       +EFE
Sbjct: 515 GKLDDVKAMIKEFE 528



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 224/461 (48%), Gaps = 14/461 (3%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLF-DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           V  YN+VL+++ RA     A  +F  EM + G+AP   TY+T+I    K     + +   
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +++ +     D+V Y+ LI+   K  D  +A  +   + S G VP++V Y+ +IN   K 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 138 KLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLD 193
               EAR LI+EM  +   V P+ ++Y++ L+   +     EA  +   + +  +    D
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T + +ID   +     +A  +F  M   G  P+V++YN L+    +A+    A  +  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA-----ITYSTIIAI 308
            M  K +  +V+TY+ ++  + K+   ++A  L+  M +RG  PN      +T++ +IA 
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             KAG  ++A+ LF+++ +  ++ D + +  +I    + G V  A+ +L  +      PN
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     +  L ++GRIEEA     +   +G V D   +G ++    R  +  + +++  
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++S G+ PD+    ++++   K  + E A  +  EM  +G
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 209/437 (47%), Gaps = 13/437 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  YN ++  + ++        LF+E+ +RG  PD  TY+TLI    K G  + A  
Sbjct: 34  APTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARR 93

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL--KSSGIVPDLVAYNTMINV 133
               M       ++V YS LI    K+    +A  +   +  KS  ++P+++ YN+ ++ 
Sbjct: 94  LHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 153

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             K  +  EA  L+  +R+    V PDTV++STL++   +  +  EA SVF +M      
Sbjct: 154 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 213

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N +++   + D  + A  +  SM   G+ P V++Y+ L+  + +A    EA+ L
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 273

Query: 252 FRLMQRKEIEQNV-----VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
              M  +    NV     VT+N +I    K+   E+A+ L +EM  + ++P+ +T+  +I
Sbjct: 274 LHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 333

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
               KAG+++ A  +   + + GV  + V Y  ++    + G +  A + L E+      
Sbjct: 334 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 393

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P++I   + +  L RA R ++A  +  +    G   D   +  +++   ++ K    I V
Sbjct: 394 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITV 453

Query: 423 FEKMRSAGYFPDSHIIA 439
            E+M   G+ PDS   A
Sbjct: 454 LEEMVGKGHQPDSFTFA 470



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 187/400 (46%), Gaps = 15/400 (3%)

Query: 92  YSNLIELARKLSDYSKAISIF-SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           Y+ +++   +  D ++A+ IF   +   G+ P +V YNT+IN   K+        L EE+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
            E+G  PD V+Y+TL++   +     EA  +  +M+   C  ++ T +++I+   ++   
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 211 KDADRLFWSMRKMGID--PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE--IEQNVVT 266
            +A  L   M +   D  P++++YN+ L    +  +  EA  L R ++     +  + VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           ++T+I    K  + ++A ++  +M   G  PN ITY+ ++    KA K++RA  + + + 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT-IPRETAITIL----AR 377
             GV  D + Y  ++ A+ +   V  A  LLH +      PN  +P +    IL     +
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           AG  E+A+ +F +        D+  FG +I+   +  +     ++ + M + G  P+   
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              +++   K    E A     EM   GCV  D + +  L
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCV-PDSITYGSL 402



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 15/303 (4%)

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           D A+  +     M + G+ P++V+YNT++    ++   G  + LF  +  +    +VVTY
Sbjct: 16  DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTY 75

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT+I    K+ + E+A  L  +M +RG  PN +TYS +I    K G++D A  L Q++  
Sbjct: 76  NTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 135

Query: 328 SGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELR------QPNTIPRETAITILARAG 379
              ++ P  + Y + +    +  + A A  L+  LR       P+T+   T I  L + G
Sbjct: 136 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 195

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +I+EA  VF      G V ++  +  ++    +  K      + E M   G  PD    +
Sbjct: 196 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 255

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGC----VFSDQVHFQMLSLYGARK--DFNMLESLF 493
           ++++++ K    + A +L   M   GC    +  D+V F +L + GA K  +F    +LF
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL-IAGACKAGNFEQASALF 314

Query: 494 ERL 496
           E +
Sbjct: 315 EEM 317


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 220/455 (48%), Gaps = 17/455 (3%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +    P++ A N+VL  +++  +++    ++ +M  RG +P+  TY TLI    ++
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G F  A     +M + ++   +V+Y+ LI      S  S+A S+F  +++SG++P+L  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           NTM++ + K    K+A  L  EM   G+ P+ V++  L++   +  + V A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                ++   N +ID Y +     +A  L   + K  I P V +Y+ L++     +   E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L + M++K    N VTYNT+I  Y K    EKA  +  +M  +GIEPN IT+ST+I 
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            + KAGK++ A  L+ ++   G+  D V Y  +I  + + G    A RL  E+++    P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 364 NTIPRETAITILARAGRIEEATWVF--RQAFDAGEVK----DISV-------FGCMIELF 410
           N       I  L + GRI +A  +F  +   D    K    D S+       +  +I+  
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             + +     + F  MR +G  PD     +++  +
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 171/375 (45%), Gaps = 13/375 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+++ YN ++    +    + A  L+ EM   G+ P+  T+  LI    K     SA  +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    V  ++ +Y+ LI+   K  + S+A+S+ S ++   I+PD+  Y+ +I     
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L++EM+++G  P+ V+Y+TL++ Y +     +A+ V ++M E     ++ T
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y +    + A  L+  M   G+ P VV+Y  L+  + +     EA  L + MQ
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 257 RKEIEQNVVTYNTMI-------------KIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +  NV T + +I             K++      +   +   E+      PN + Y+
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I      G++ +A+  F  +R SG+  D      +I  + R   +     L  ++ + 
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 364 NTIPRETAITILARA 378
             IP  +   +LA+ 
Sbjct: 621 GIIPNSSVYRVLAKG 635



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 197/478 (41%), Gaps = 107/478 (22%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF Y+++++ +    + E A GL  EM+++G  P+  TY+TLI  + KEG  + AI  
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             QM +  +  +++ +S LI+   K      A+ +++ +   G++PD+VAY  +I+   K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF----------AEMN 186
               KEA  L +EM+E G+ P+  + S L++   ++ +  +A+ +F          ++ N
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 187 EVNCPL--------------------------------------DLTTCNIMIDVYGQLD 208
           E++  L                                      D+ TC ++I  + +  
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------ELFGEAI------------ 249
             +D   L   + KMGI P+   Y  L + Y E+          GE +            
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWG 665

Query: 250 --------HLFRLMQRKEIEQNVVT------------YNTMIKIYGKSLEHE-------- 281
                    L  + ++KE   + +T            ++T++K       HE        
Sbjct: 666 SYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILK---PPSPHEILKKVPFI 722

Query: 282 ---------KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                    KA  L ++MQ    +P+ +T +  ++     G LD    +   +R  G++ 
Sbjct: 723 GQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 782

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
           D  L  ++I  Y + G +  A+RL    ++ +     + I   A  G+ EEA  +F +
Sbjct: 783 DLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTE 840



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 149/384 (38%), Gaps = 67/384 (17%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF   V+++   RA        L  ++ + GI P+   Y  L   + + G   SA+S+
Sbjct: 589 PDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648

Query: 77  LQQMEQ--DRVS----GDLVLYSN-----LIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             +  Q  DRV+    G   + S      + E     S Y  A  I S +        L 
Sbjct: 649 CGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVL-------LW 701

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            ++T++      ++ K+   +       G K D               +  +AL +F +M
Sbjct: 702 YFHTILKPPSPHEILKKVPFI-------GQKGD--------------QRPNKALQLFRQM 740

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
              +   D+ T  + +     L      + +   +R  G+D  +   N+L+ +Y +    
Sbjct: 741 QMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEI 800

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G A  LF   Q+K+    V T+ +MI  +    + E+A  L  EM+    E N       
Sbjct: 801 GTARRLFDGTQKKD----VTTWTSMIVGHALHGQAEEALQLFTEMK----ETNK------ 846

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
                +A K  R      +  SS V  + V +  +++A    GLV   K+    +++  +
Sbjct: 847 -----RARKNKRNG----EXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYS 897

Query: 366 I-PR----ETAITILARAGRIEEA 384
           + PR       + +L RAG + EA
Sbjct: 898 LRPRISHFGCMVDLLCRAGLLTEA 921



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 42/219 (19%), Positives = 92/219 (42%), Gaps = 26/219 (11%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+   +QM+ D    D+V  +  +     L        I + ++  G+  DL   N++
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN- 189
           IN++ K      AR L +  +    K D  ++++++  +  + +  EAL +F EM E N 
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 190 ----------------CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSY 232
                            P D+T   +++       + ++  + F SM++   + P +  +
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLM-ACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 905

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             ++ +   A L  EA   +  + +  +  N V + T++
Sbjct: 906 GCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL 941



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/225 (18%), Positives = 92/225 (40%), Gaps = 24/225 (10%)

Query: 247 EAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +A+ LF  + R+ ++ +N   Y+ +I +   +  + KA  LM+++               
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDL--------------- 96

Query: 306 IAIWGKAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           I    K+ +      +F  L R    +  P ++  +I+A+  +GLV  A  + +++   +
Sbjct: 97  IQCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---D 153

Query: 365 TIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P   A  +    L + GR +    V+      G   ++  +G +I+   R   +    
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +F++M     FP   I  +++           A+ ++  M+  G
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 216/440 (49%), Gaps = 12/440 (2%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            D   A+ +   +KS+G  PD   +  +I     A     A   ++ +R  G  P+ V+Y
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTY 60

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + L+  +    K  EA+ +  EM E  CP +L T N+++D   +L M   A  +   M +
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P+V+++N+L+  + +     +A  L  +M  K +  NVVTY+ +I    KS +  +
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  +++EM+  G+ P+A TYS +I    KA K++ A  + +++  SG   D V+Y ++I 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV- 397
           A+ + G +  A++ L E+R+    P+ +   T I  L + G+I EA  +  Q  ++G+V 
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +I    ++       ++ ++M  AG  PD      +++   K    E A+ L
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360

Query: 458 YSEMQEEGCVFSDQVHFQMLS-LYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIY 515
              M+  GC  +   +  ++S L  ARK  +  E + E + ++    N    + +V G+ 
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKARK-VDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 419

Query: 516 ERANRLNDASRIMNRMNKRR 535
             + R+ +A +++ RM   R
Sbjct: 420 -VSGRIKEAQQLVQRMKDGR 438



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 228/467 (48%), Gaps = 12/467 (2%)

Query: 4   AILDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           A L+ + E   A ++P  F +  ++  +  A   +   G  D +R  G  P+  TY+ LI
Sbjct: 8   AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALI 64

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F +    + A+  L++M +     +LV Y+ L++   KLS    A  +  ++   G  
Sbjct: 65  AAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 124

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ +N++++ F K     +AR L+  M  +G++P+ V+YS L++   ++ KF+EA  V
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM       D  T + +I    + D  ++A+++   M   G  P VV Y++++  + +
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAI 300
           +    EA    + M+++    +VVTYNT+I    K  +  +A  ++ +MQ  G + P+ +
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV 304

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYST+I    K+  L  A  L  ++  +G   D V Y T+I    + G +  A+ LL  +
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 364

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           ++    PN +   T I+ L +A +++EA  V  +  +AG   ++  +  M+     + + 
Sbjct: 365 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 424

Query: 417 ANVIEVFEKMRS--AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
               ++ ++M+   A   PD+     ++N+       + A+ L  +M
Sbjct: 425 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 220/448 (49%), Gaps = 10/448 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           YSP++  YN +++ +    +   A  LF  M++ G  PD  TY TLI      G  + A+
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 75  SWLQQMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
              Q+M  D          +++ Y+ +++   K+    +A  +F  +K+ G++P +++YN
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+ F  A  ++E++ L++EM +QG++PD V+++ L++   +  K +EA  +   M E 
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               DL T N +I+ +  +     A  LF SM   G +P V+SYN L+  Y +     EA
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + L+  M       NV+TY++++K    + + + A  L   M+  GI  N+ TY   +  
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 434

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPN 364
             K   L  A  LF +L+SS  +++      +I    + G +  A    ++L +E  +PN
Sbjct: 435 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 494

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     I    R G++++A  + ++    G   DI  +  ++  F  + K   V+++  
Sbjct: 495 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 554

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFE 452
           +M      PD+   ++V++   K  +++
Sbjct: 555 RMAQKDVSPDAITCSIVVDMLSKDEKYQ 582



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 198/389 (50%), Gaps = 14/389 (3%)

Query: 7   DWINEEARY----SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +N+ +RY     P+V  YN+++  + +  + + A  LF+EM+ +G+ P   +Y++LI 
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH 258

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            F   G ++ +   L +M    +  D+V ++ LI+   K     +A  +   +  SGIVP
Sbjct: 259 GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP 318

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           DLV YN++I  F        AR L   M  +G +PD +SY+ L+N Y +  K  EA+ ++
Sbjct: 319 DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLY 378

Query: 183 AEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            EM  V    ++ T + ++    + G++D   DA +LF  M+  GI  +  +Y   L   
Sbjct: 379 NEMLLVGKRPNVITYDSLLKGIFLAGKVD---DAKKLFSVMKAHGIAENSYTYGIFLDGL 435

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            + +   EA+ LF  ++    +  +   N +I    K+ + E A  L +++ N G EPN 
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +TY+ +I  + + G++D+A +L QK+ ++G   D + Y T++  +     +    +LLH 
Sbjct: 496 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 555

Query: 360 LRQ----PNTIPRETAITILARAGRIEEA 384
           + Q    P+ I     + +L++  + +E 
Sbjct: 556 MAQKDVSPDAITCSIVVDMLSKDEKYQEC 584



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/530 (22%), Positives = 246/530 (46%), Gaps = 47/530 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS+ ++N +L  + + K +     L+++MR  G++ DR T + L+ C            
Sbjct: 66  TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNC------------ 113

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                              L  + R    ++    I  R    G  P++V YNT+I    
Sbjct: 114 -------------------LCNVNRLREGFAAFAGILRR----GYSPNIVTYNTLIKGLC 150

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM------NEVN 189
                 EA  L   M++ G  PD V+Y TL+           AL +  EM       E+N
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T NI++D   ++    +A +LF  M+  G+ PS++SYN+L+  +  A  + E+ 
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M  + ++ ++VT+N +I    K  +  +A  L+  M   GI P+ +TY+++I  +
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
              G L+ A  LF  + S G E D + Y  +I  Y +   V  A +L +E+    ++PN 
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I  ++ +  +  AG++++A  +F      G  ++   +G  ++   +N      +++F +
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           ++S+ +  +   +  +++   K  + ETA +L+ ++  EG   +   +  M+  +     
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510

Query: 486 FNMLESLFERLDSDSNINKKELHHVVA-GIYERANRLNDASRIMNRMNKR 534
            +    L ++++++        ++ +  G YE +N+L +  ++++RM ++
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRGFYE-SNKLEEVVQLLHRMAQK 559



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 160/362 (44%), Gaps = 37/362 (10%)

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           + A+  F  +  S   P L ++N +++   K K + +   L  +MR  G+  D  + + L
Sbjct: 51  THALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNIL 110

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           LN     ++  E  + FA +       ++ T N +I          +A RLF  M+K+G 
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLM----QRKEI--EQNVVTYNTMIKIYGKSLE 279
            P VV+Y TL++          A+ L + M     R EI  + NV+TYN ++    K   
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A  L +EM+ +G+ P+ I+Y+++I  +  AGK + +  L  ++   G++ D V +  
Sbjct: 231 EDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNV 290

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           +I    + G V  AK+LL  +                                ++G V D
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVM-------------------------------IESGIVPD 319

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  +IE F       +  E+F  M S G  PD     +++N Y K  + E A  LY+
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 460 EM 461
           EM
Sbjct: 380 EM 381



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 144/309 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +NV++  + +  +   A  L   M + GI PD  TY++LI  F   G  +SA   
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M       D++ Y+ LI    K     +A+ +++ +   G  P+++ Y++++     
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 402

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    +A+ L   M+  G+  ++ +Y   L+   +N    EA+ +F E+   N  L++  
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 462

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID   +    + A  LF  +   G +P+VV+Y  ++  +       +A  L + M+
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 +++TYNT+++ + +S + E+   L+  M  + + P+AIT S ++ +  K  K  
Sbjct: 523 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQ 582

Query: 317 RAAMLFQKL 325
               L  + 
Sbjct: 583 ECLHLLPRF 591



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 48/101 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  Y +++    R  Q + A+ L  +M   G  PD  TY+TL+  F +    +  +
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
             L +M Q  VS D +  S ++++  K   Y + + +  R 
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 211/445 (47%), Gaps = 43/445 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y  +LR++ +A+++E A  +F  M  +G +P+ ++YS LI    +    D A   
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M       ++V Y +L+    K+    +A+ +FSR+   G  PD V YN +I+ F K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L EEM E+G  P   +Y++LL+ +    +F    S+F +M    C  ++ T
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D + ++    +A RLF  MR +G  P                             
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP----------------------------- 260

Query: 257 RKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                 +VV+YNT+++ +  K   HE A  L++EM   G+ P+ ++Y+ +I  + K+G L
Sbjct: 261 ------DVVSYNTLMRGMCSKGKPHE-AQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI- 374
           D A  LF ++  SG+E D   Y T+I    R G V  A  +  ++    + P + A+ I 
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP-DAAVVIP 372

Query: 375 ----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
               L R  R+ E+  +F+       V  I  +  ++    + K+  +V E+F ++   G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 431 YFPDSHIIALVLNSYGKLREFETAD 455
           + PD  I  ++L +  +  + E A+
Sbjct: 433 FSPDVEISKVILETLRRSDDKEAAE 457



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 214/497 (43%), Gaps = 75/497 (15%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           +A   W   +  Y+    +YN +L  + ++ + +  +G +++M   G  P+ YTY  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLL- 59

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
                     ++   Q+ E+ R                         S+F  + + G  P
Sbjct: 60  ---------RSLCQAQRFEEAR-------------------------SVFRGMAAQGCSP 85

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           ++ +Y+ +I    + +   EA  L+ EM + G +P+ V+Y +LL+   +  K  EA+ +F
Sbjct: 86  NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLF 145

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           + M    CP D    N++ID + +     +A RLF  M + G  P+V +YN+LL  +   
Sbjct: 146 SRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
             FG    LF+ M R+    N+ T+N ++  + K  +  +A  L  EM++ G  P+ ++Y
Sbjct: 206 GEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSY 265

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR- 361
           +T++      GK   A  L +++  SGV  D V Y  +I  Y + G + HA +L +E+  
Sbjct: 266 NTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325

Query: 362 ---QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              +P+     T I  L RAG++  A                                  
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAA---------------------------------- 351

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV-FSDQVHFQML 477
              VF+ M + G  PD+ ++  ++    +      + +L+  M +  CV    + +  M 
Sbjct: 352 -FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410

Query: 478 SLYGARKDFNMLESLFE 494
            L  A++  ++ E   E
Sbjct: 411 KLCKAKRSDDVCEIFHE 427



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 57/134 (42%)

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT      +  L +A R EEA  VFR     G   ++  +  +I    R +K     E+
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G+ P+      +L+   K+ + + A DL+S M   GC     V+  ++  +  
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 483 RKDFNMLESLFERL 496
           + D      LFE +
Sbjct: 170 KGDMGEAYRLFEEM 183


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 234/477 (49%), Gaps = 25/477 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ +V AY  V+  + +  +   A  +FDEM+Q+GI P++Y+Y++LI+ F K   F  A+
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+      +   +   I    K  +  KAI  +  +KS GIVPD+VA N ++   
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K+     A+ +  E++  GV PDT++Y+ ++    +  KF EA+ +F +M E NC  D+
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +ID   +     +A ++F+ +++M ++P+  +YNTLL   G      E +HL   
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N++TYNT++    K+     A +++  M  +G  P+  +Y+T+I    K  +
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 709

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAI- 372
            + A  +F +++   +  D     T++ ++ ++GL+  A  ++ E   QP +    ++  
Sbjct: 710 YNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCH 768

Query: 373 ----TILARAGRIEEATWVFRQAFDAGEVKDISVFGC-MIELFSRNKKYANVIEVFEKMR 427
                IL +AG   E +  F +   +  +     F C +I+   + KK     E+ +K +
Sbjct: 769 SLMEGILKKAG--TEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 826

Query: 428 SAGYFPDSHIIALVLNSYGKL-------REFETADDLYSEMQEEGCVFSDQVHFQML 477
           S G       ++L   SY  L          + A+ L++EM+E GC   D+  + +L
Sbjct: 827 SFG-------VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGC-GPDEFTYNLL 875



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 224/471 (47%), Gaps = 4/471 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   + +EA    + + YN ++  ++++     A  ++  M   G+ P   TYS L
Sbjct: 221 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVL 280

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK    ++ +  L++ME   V  ++  Y+  I +  +   + +A  I + +++ G 
Sbjct: 281 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGC 340

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ +  +I V   A    +A+ +  +M++   KPD V+Y TLL+ + +N +    + 
Sbjct: 341 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVME 400

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++     +ID   Q+    +A  +F  M++ GI P   SYN+L+  + 
Sbjct: 401 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 460

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A+ FG+A+ LF+ M     + N  T+   I  YGKS E  KA    + M+++GI P+ +
Sbjct: 461 KADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 520

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++    K+G+L  A  +F +L++ GV  D + Y  MI    +      A ++ +++
Sbjct: 521 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 580

Query: 361 RQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            + N +P      + I  L +AGR +EA  +F Q  +         +  ++    R  K 
Sbjct: 581 IENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 640

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M  + Y P+      +L+   K      A D+   M  +GC+
Sbjct: 641 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 691



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 202/461 (43%), Gaps = 41/461 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ +  +  T++ +    G EG   SA   L  M++  +  +   Y+ L+    
Sbjct: 191 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 250

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K     +A+ ++  +   G+VP +  Y+ ++  FGK +  +    L+ EM   GVKP+  
Sbjct: 251 KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 310

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+  + +  +  +F EA  + AEM    C  D+ T  ++I V        DA  +FW M
Sbjct: 311 SYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 370

Query: 221 RKMGIDPSVVSYNTLLRVY---GEAE---------------------------------L 244
           +K    P  V+Y TLL  +   GE++                                 +
Sbjct: 371 KKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 430

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F EA+ +F  M++K I     +YN++I  + K+     A  L + M   G +PN  T+  
Sbjct: 431 F-EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
            I  +GK+G+  +A   ++ ++S G+  D V    ++    + G +  AKR+ HEL+   
Sbjct: 490 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI     I   ++A + +EA  +F    +   V D+ V   +I+   +  +     
Sbjct: 550 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAW 609

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           ++F +++     P       +L   G+  + +    L  EM
Sbjct: 610 QIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 650



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 152/310 (49%)

Query: 21   AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            +YN ++  ++     ++A GLF EM++ G  PD +TY+ L+   GK    +  +   ++M
Sbjct: 836  SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +       V Y+ +I    K     +AI ++  L S G  P    Y  +++   KA   
Sbjct: 896  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 955

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            ++A  L  EM E G K +   Y+ LLN +       +   +F +M +     D+ +  I+
Sbjct: 956  EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            ID   +     D    F  + +MG++P +++YN L+   G+++   EA+ LF  MQ+K I
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              N+ TYN++I   GK+ +  +A  + +E+  +G +PN  TY+ +I  +  +G  D A  
Sbjct: 1076 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1135

Query: 321  LFQKLRSSGV 330
             + ++   G 
Sbjct: 1136 AYGRMIVGGC 1145



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 218/491 (44%), Gaps = 45/491 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  + V+++ +  A +   A  +F +M++    PDR TY TL+  F   G   S +  
Sbjct: 342 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEI 401

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+ D  + ++V Y+ +I+   ++    +A+ +F  +K  GIVP+  +YN++I+ F K
Sbjct: 402 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 461

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F +A  L + M   G KP+  ++   +N Y ++ + ++A+  +  M       D+  
Sbjct: 462 ADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 521

Query: 197 CNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N ++      G+L MAK   R+F  ++ MG+ P  ++Y  +++   +A  F EA+ +F 
Sbjct: 522 GNAVLFGLAKSGRLGMAK---RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 578

Query: 254 LM---------------------------------QRKE--IEQNVVTYNTMIKIYGKSL 278
            M                                 Q KE  +E    TYNT++   G+  
Sbjct: 579 DMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREG 638

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++  +L++EM +    PN ITY+TI+    K G ++ A  +   + + G   D   Y 
Sbjct: 639 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYN 698

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAF-DA 394
           T+I    +      A  +  ++++   P+     T +    + G ++EA  + ++ F   
Sbjct: 699 TVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQP 758

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D S    ++E   +       IE  E + S+G   D   +  ++    K ++   A
Sbjct: 759 GSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA 818

Query: 455 DDLYSEMQEEG 465
            +L  + +  G
Sbjct: 819 HELVKKFKSFG 829



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/532 (22%), Positives = 221/532 (41%), Gaps = 62/532 (11%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P + +YN V+  +++ +++  A  +F +M++  + PD  T  T++  F K G+   A+  
Sbjct: 692  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 750

Query: 77   LQQM------EQDRVS--------------------GDLVLYSN-------LIELARKLS 103
            +++       + DR S                     +++  S        L  L + L 
Sbjct: 751  IKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLC 810

Query: 104  DYSKAIS---IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               KA+    +  + KS G+     +YN++I       L   A  L  EM+E G  PD  
Sbjct: 811  KQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF 870

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y+ LL+   ++ +  E L V  EM+         T N +I    +    + A  L++++
Sbjct: 871  TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 930

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               G  P+  +Y  LL    +A    +A +LF  M     + N   YN ++  +  +   
Sbjct: 931  MSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 990

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            EK  +L Q+M ++GI P+  +Y+ II    KAG+L+     F++L   G+E D + Y  +
Sbjct: 991  EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLL 1050

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGE 396
            I    +   +  A  L +E+++   +P      + I  L +AG+  EA  ++ +    G 
Sbjct: 1051 IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1110

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS--------------------H 436
              ++  +  +I  +S +    +    + +M   G  P+S                     
Sbjct: 1111 KPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSYE 1170

Query: 437  IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            II   +N+ G L          S  ++ GCV   Q    M S  GA +D N+
Sbjct: 1171 IIVTFINAEGMLAYSRAWKFCISSREDNGCVHPQQFAKFMASC-GALRDPNI 1221



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 138/291 (47%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E    P  F YN++L  + ++ + E    + +EM ++G      TY+T+I+   K    
Sbjct: 861  KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 920

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + AI     +     S     Y  L++   K      A ++F+ +   G   +   YN +
Sbjct: 921  EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNIL 980

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            +N    A   ++   L ++M +QG+ PD  SY+ +++   +  +  + L+ F ++ E+  
Sbjct: 981  LNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGL 1040

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              DL T N++ID  G+    ++A  LF  M+K GI P++ +YN+L+   G+A    EA  
Sbjct: 1041 EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1100

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            ++  +  K  + NV TYN +I+ Y  S   + A      M   G  PN+ T
Sbjct: 1101 MYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/390 (20%), Positives = 175/390 (44%), Gaps = 11/390 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           +++L R          +F  ++   +  ++  +  +    G     + A + +  M+E G
Sbjct: 175 MLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 234

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  +  +Y+ L+   V++    EAL V+  M        + T ++++  +G+    +D +
Sbjct: 235 IVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGK---RRDVE 291

Query: 215 RLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            + W +R+M   G+ P+V SY   +RV G+A  F EA  +   M+ +  + +V+T+  +I
Sbjct: 292 TVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLI 351

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           ++   +     A ++  +M+    +P+ +TY T++  +   G+      ++  +++ G  
Sbjct: 352 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYN 411

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWV 387
            + V Y  +I A  +VG V  A  +  E++Q   +P +    + I+   +A R  +A  +
Sbjct: 412 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 471

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F+     G   +       I  + ++ +    I+ +E M+S G  PD      VL    K
Sbjct: 472 FKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 531

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQML 477
                 A  ++ E++  G V  D + + M+
Sbjct: 532 SGRLGMAKRVFHELKAMG-VSPDTITYTMM 560



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/355 (20%), Positives = 154/355 (43%), Gaps = 35/355 (9%)

Query: 147 IEEMREQGVKP----DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           +E  R    +P     T S + +L+L  ++ +  +   VF  M       ++ T   +  
Sbjct: 153 LERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFG 212

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
             G     + A      M++ GI  +  +YN L+    ++    EA+ ++++M    +  
Sbjct: 213 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVP 272

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +V TY+ ++  +GK  + E    L++EM+  G++PN  +Y+  I + G+A + D A  + 
Sbjct: 273 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRIL 332

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
            ++ + G                                +P+ I     I +L  AGRI 
Sbjct: 333 AEMENEGC-------------------------------KPDVITHTVLIQVLCDAGRIS 361

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  VF +   + +  D   +  +++ F+ N +  +V+E++  M++ GY  +      V+
Sbjct: 362 DAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVI 421

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
           ++  ++     A +++ EM+++G V     +  ++S +     F     LF+ +D
Sbjct: 422 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD 476



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 150/331 (45%), Gaps = 12/331 (3%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           A+  +R   + R+  +  +  S N +L +  +    G+   +F +MQR+ ++ NV T+  
Sbjct: 150 AEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAA 209

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-LFQKLRSS 328
           +    G       A   +  M+  GI  NA TY+ ++    K+G  DR A+ +++ +   
Sbjct: 210 IFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYKVMMVD 268

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV      Y  ++VA+ +   V     LL E+     +PN       I +L +A R +EA
Sbjct: 269 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEA 328

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  +  + G   D+     +I++     + ++  +VF KM+ +   PD      +L+ 
Sbjct: 329 YRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 388

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV---HFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +    E ++  ++++ M+ +G  ++D V      + +L    + F  LE +F+ +     
Sbjct: 389 FADNGESQSVMEIWNAMKADG--YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGI 445

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMN 532
           + ++  ++ +   + +A+R  DA  +   M+
Sbjct: 446 VPEQYSYNSLISGFLKADRFGDALELFKYMD 476


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 230/456 (50%), Gaps = 7/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++    +    E    L  EM ++ I P+  TYS++I  + K+G+ D AI+ 
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M    +  +  +Y+ LI+   K      A  +++ +K SG+  + V ++ ++N   +
Sbjct: 436 MKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKR 495

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   EA  L++++  +G+  D V+Y++L++ + +  K   AL++  EM E + P D+ T
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVT 555

Query: 197 CNIMIDVYGQLDMAK-DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N++I+  G L+  K +A  ++  M +MG+ P+  +YN +++ Y +      A+ L+  M
Sbjct: 556 YNVLIN--GLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM 613

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +  +I  + +T NT++    ++ E EKA N++ EM   GI PN + +  ++    K+GK 
Sbjct: 614 KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKA 673

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           +    + ++L   G++I+   Y  +IV + R+ +   A  +L  + +     +T+     
Sbjct: 674 NAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNAL 733

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I     +  +++A   + Q  + G   +I  +  ++         A   E+F+KM+  G 
Sbjct: 734 IRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGL 793

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD+     +++ YGK+   + +  LY EM  +G V
Sbjct: 794 NPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFV 829



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 230/469 (49%), Gaps = 26/469 (5%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  +N ++    +A +  LA  L + MR+ G+  D  +Y+TLI  F K G +D A S L 
Sbjct: 147 VIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLH 206

Query: 79  QMEQDR---------------------VSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           ++ + R                     +  DL+ Y+ +I    K     +A +++  +  
Sbjct: 207 EISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMII 266

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           +G +PD+V Y++++N   K     EA+ L+ EM++ GV P+ V+Y+TL++   +     E
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWE 326

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A +  +++      LDL  C  ++D   +    K+A+ +F ++ K+ + P+ ++Y  L+ 
Sbjct: 327 AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            Y +         L + M+ K I  NV+TY+++I  Y K    ++A N+M++M ++ I P
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           NA  Y+ +I  + KAGK + A  L+ +++ SG++++ VL+  ++   +R   +  A+ LL
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL 506

Query: 358 HELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            ++     +      T L     +AG+   A  +  +  +     D+  +  +I     +
Sbjct: 507 KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEH 566

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            KY     V+  M   G  P+     +++ +Y K  E + A +L++EM+
Sbjct: 567 GKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMK 614



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 215/492 (43%), Gaps = 44/492 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V  Y+ ++  + +  +   A  L  EM++ G+ P+   Y+TLI    K G    A 
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +   Q+    ++ DLV+ + L++   K S   +A  +F  L    ++P+ + Y  +I+ +
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K    +    L++EM E+ + P+ ++YS+++N Y +     EA++V  +M + N   + 
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 195 TTCNIMIDVY---GQLDMAKD--------------------------------ADRLFWS 219
               I+ID Y   G+ ++A D                                A+ L   
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +   G+    V+Y +L+  + +A     A+++   M  K I  +VVTYN +I      LE
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLIN---GLLE 565

Query: 280 HEK--ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           H K  A ++   M   G+ PN  TY+ +I  + K G+LD A  L+ +++S  +    +  
Sbjct: 566 HGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITC 625

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T++V     G +  A  +L+E+      PN +     +   +++G+      +  Q  D
Sbjct: 626 NTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVD 685

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   +   +  +I +F R +       V + M   G+  D+     ++  Y +    + 
Sbjct: 686 MGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKK 745

Query: 454 ADDLYSEMQEEG 465
           A   Y++M  EG
Sbjct: 746 ALATYTQMLNEG 757



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 184/392 (46%), Gaps = 21/392 (5%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YNV++  +L   ++E A  ++  M + G+AP++ TY+ +I  + K+G  D+A+    
Sbjct: 553 VVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWN 611

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+  ++    +  + L+    +  +  KA+++ + +   GI P+LV +  ++N   K+ 
Sbjct: 612 EMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSG 671

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
                  + E++ + G+K +  +Y+ L+ ++       +A SV   M       D  T N
Sbjct: 672 KANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYN 731

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I  Y +    K A   +  M   G+ P++V+YN LL     A L  E   LF  M+  
Sbjct: 732 ALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKEN 791

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +  TY+T+I  YGK    +++  L  EM  +G  P   TY+ +I+ + K GK+D+A
Sbjct: 792 GLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQA 851

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH--------------AKRLLHELRQPN 364
             L  +++  GV      Y  +I  +    L  H              AK L+ E+    
Sbjct: 852 RELLNEMQVRGVPPSSSTYDILICGW--CNLSKHPDLDRTLKKIYRTDAKNLITEMNDKG 909

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAF 392
            +P ++ I  +    AR G++ +A  + ++ F
Sbjct: 910 FVPCKSTIACISSTFARPGKMLDAEKLLKEIF 941



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 200/410 (48%), Gaps = 28/410 (6%)

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M +  +   L+L++ LI         S+   I++ +  S + P++  +N +++ + K   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCK--- 57

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
                L ++ +R   V+ DTV+Y+T++  + ++    +A    + M + +   D  TCNI
Sbjct: 58  MGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++  + ++ +AK  +R+  ++   G    V+ +NTL+  Y +A     A+ L   M+++ 
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGI--------------------EPN 298
           +  ++V+YNT+I  + K  E++KA +L+ E+ ++RG+                    E +
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            ITY+TII+ + K   L+ A  L++++  +G   D V Y +++    + G ++ A+ LL 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+++    PN +   T I  L +AG   EA     Q    G   D+ +   +++   ++ 
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           K     ++F  +      P+S     +++ Y K+ + E  + L  EM+E+
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK 407



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 12/323 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS    N ++  +  A + E A  + +EM   GI P+   +  L+    K G  ++ +  
Sbjct: 620 PSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQM 679

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +Q+    +  +   Y+NLI +  +L    KA S+   +   G V D V YN +I  + +
Sbjct: 680 HEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCE 739

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   K+A     +M  +GV P+ V+Y+ LL   +      E   +F +M E     D +T
Sbjct: 740 SSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAST 799

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  YG++   K++ RL+  M   G  P   +YN L+  + +     +A  L   MQ
Sbjct: 800 YDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQ 859

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEK------------ATNLMQEMQNRGIEPNAITYST 304
            + +  +  TY+ +I  +    +H              A NL+ EM ++G  P   T + 
Sbjct: 860 VRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIAC 919

Query: 305 IIAIWGKAGKLDRAAMLFQKLRS 327
           I + + + GK+  A  L +++ S
Sbjct: 920 ISSTFARPGKMLDAEKLLKEIFS 942


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 234/547 (42%), Gaps = 46/547 (8%)

Query: 34  QWELAHGLFDEM----RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
            WE A  LF+ +        +  D +    L+   G+E  +  A   L ++       D+
Sbjct: 158 HWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDV 217

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK------------- 136
             Y+ ++    +   Y KAI++F R+K  G  P LV YN +++VFGK             
Sbjct: 218 RAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLE 277

Query: 137 -----------------------AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
                                    L +EA+    E++  G +P TV+Y+ LL ++ +  
Sbjct: 278 EMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAG 337

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
            + EALSV  EM E NCP D  T N ++  Y +   +K+A  +   M + G+ P+ ++Y 
Sbjct: 338 VYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYT 397

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           T++  YG+A    EA+ LF  M+      N  TYN ++ + GK     +   ++ +M++ 
Sbjct: 398 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSN 457

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  PN  T++TI+A+ G  G       +F++++S G E D   + T+I AY R G    A
Sbjct: 458 GCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 517

Query: 354 KRLLHELRQPN----TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
            ++  E+ +             +  LAR G       V       G     + +  M++ 
Sbjct: 518 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 577

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           +++   Y  +  + E +     FP   ++  +L +  K R    ++  ++  ++ G    
Sbjct: 578 YAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG-YKP 636

Query: 470 DQVHF-QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           D V F  MLS++     ++  E + + +  D        ++ +  +Y R      A  I+
Sbjct: 637 DMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEIL 696

Query: 529 NRMNKRR 535
             + K +
Sbjct: 697 KTLEKSQ 703



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 254/574 (44%), Gaps = 59/574 (10%)

Query: 16  SPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           SP++  YNV+L    +  + W    G+ +EMR +G+  D +T ST+++   +EG+   A 
Sbjct: 249 SPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAK 308

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  +++        V Y+ L+++  K   Y++A+S+   ++ +    D V YN ++  +
Sbjct: 309 DFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAY 368

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A   KEA ++IE M ++GV P+ ++Y+T+++ Y +  K  EAL +F  M E  C  + 
Sbjct: 369 ARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 428

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++ + G+   + +  ++   M+  G  P+  ++NT+L + G   +      +FR 
Sbjct: 429 CTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFRE 488

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+    E +  T+NT+I  YG+      A+ +  EM   G      TY+ ++    + G 
Sbjct: 489 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 548

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
                 +   ++S G +     Y  M+  Y + G     +R+   + +    P    +  
Sbjct: 549 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRT 608

Query: 375 L--------ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           L        A AG  E A  +F++    G   D+ +F  M+ +F+RN  Y     + + +
Sbjct: 609 LLLANFKCRALAGS-ERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSI 664

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADD------------------------------ 456
              G  PD      +++ Y +  E   A++                              
Sbjct: 665 HEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLM 724

Query: 457 -----LYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKEL 507
                + SEM E G   C+F+   +   +S Y A   +  +E + E +  +D   N+   
Sbjct: 725 QEAVRMLSEMTERGIRPCIFT---YNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTF 781

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
             VV G Y RA + ++A   M+ ++K +TF+   
Sbjct: 782 KMVVDG-YCRAGKYSEA---MDFVSKIKTFDPCF 811



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 213/506 (42%), Gaps = 44/506 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L+   +A  +  A  +  EM +     D  TY+ L+  + + G    A 
Sbjct: 319 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAA 378

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             ++ M Q  V  + + Y+ +I+   K     +A+ +F  +K +G VP+   YN ++++ 
Sbjct: 379 VVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSML 438

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVNCPL 192
           GK     E   ++ +M+  G  P+  +++T+L L       KFV    VF EM       
Sbjct: 439 GKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVN--RVFREMKSCGFEP 496

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N +I  YG+     DA +++  M + G +  V +YN LL        +    ++ 
Sbjct: 497 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 556

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEH------EKATN--------------LMQEMQN 292
             M+ K  +    +Y+ M++ Y K   +      E+  N              L+   + 
Sbjct: 557 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKC 616

Query: 293 R---------------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           R               G +P+ + ++++++I+ +    D+A  + Q +   G+  D V Y
Sbjct: 617 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTY 676

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            +++  Y R G    A+ +L  L     +P+ +   T I    R G ++EA  +  +  +
Sbjct: 677 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTE 736

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G    I  +   +  ++    Y  + +V E M      P+     +V++ Y +  ++  
Sbjct: 737 RGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 796

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSL 479
           A D  S+++     F DQ   Q L+L
Sbjct: 797 AMDFVSKIKTFDPCFDDQ-SIQRLAL 821



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 215/469 (45%), Gaps = 13/469 (2%)

Query: 83  DRVSGDLVLYSNLIELARKLSD---YSKAISIFSRL----KSSGIVPDLVAYNTMINVFG 135
           D V  +L L ++L+ L + L D   + +A+ +F  L     S  +  D      ++ + G
Sbjct: 135 DSVKSEL-LTTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILG 193

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   +  A  L++++  Q    D  +Y+T+L+ Y    K+ +A+++F  M E+     L 
Sbjct: 194 RESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLV 253

Query: 196 TCNIMIDVYGQLDMA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T N+++DV+G++  + +    +   MR  G+     + +T+L       L  EA   F  
Sbjct: 254 TYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAE 313

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++    E   VTYN +++++GK+  + +A ++++EM+      +++TY+ ++A + +AG 
Sbjct: 314 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGF 373

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
              AA++ + +   GV  + + Y T+I AY + G    A +L + +++    PNT     
Sbjct: 374 SKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 433

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +++L +  R  E   +       G   + + +  ++ L         V  VF +M+S G
Sbjct: 434 VLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCG 493

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + PD      ++++YG+      A  +Y EM   G       +  +L+    + D+   E
Sbjct: 494 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 553

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
           ++   + S      +  + ++   Y +        RI   +N+ + F S
Sbjct: 554 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPS 602


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 219/457 (47%), Gaps = 5/457 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-MFDS 72
           +YS  V AY  +L    R+ +++ A  LFD+M   G+ P   TY+ ++  +GK G  +  
Sbjct: 211 KYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGR 270

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +  L +M    +  D    S +I    +     +A    + LK +G  P  V YN+M+ 
Sbjct: 271 ILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQ 330

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           VFGKA ++ EA  +++EM +    PD+++Y+ L   YV      E ++V   M       
Sbjct: 331 VFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMP 390

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +  T   +ID YG+     DA RLF  M+ +G  P+V +YN++L + G+     + I + 
Sbjct: 391 NAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 450

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+      N  T+NTM+ +  +  +H     +++EM+N G EP+  T++T+I+ + + 
Sbjct: 451 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARC 510

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G    +A ++ ++  SG       Y  ++ A    G    A+ ++ +++     P ET+ 
Sbjct: 511 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSY 570

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           ++L    ++AG +     V ++ +D        +   ++    + +    +   F++++ 
Sbjct: 571 SLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQK 630

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            GY PD  +I  +L+ + + + F  A ++   + E G
Sbjct: 631 YGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECG 667



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 221/467 (47%), Gaps = 6/467 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYST 59
           R++ + D + E     P++  YNV+L    +  + W     L DEMR +G+  D +T ST
Sbjct: 234 RAIDLFDKM-EGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCST 292

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           +I+  G+EGM D A  +L +++ +      V+Y++++++  K   Y++A+SI   ++ + 
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD + YN +   + +A    E   +I+ M  +GV P+ ++Y+T+++ Y +  +  +AL
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 412

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F++M ++ C  ++ T N ++ + G+    +D  ++   M+  G  P+  ++NT+L V 
Sbjct: 413 RLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVC 472

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            E         + R M+    E +  T+NT+I  Y +      +  +  EM   G  P  
Sbjct: 473 SEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCV 532

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+ ++      G    A  + Q +++ G + +   Y  ++  Y + G V   +++  E
Sbjct: 533 TTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKE 592

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDA----GEVKDISVFGCMIELFSRNKK 415
           +      P    +  L  +           +AFD     G   D+ V   M+ +FSRNK 
Sbjct: 593 IYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKM 652

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           ++   E+   +   G  P+      +++ Y +  E   A+++   +Q
Sbjct: 653 FSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQ 699



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 226/469 (48%), Gaps = 5/469 (1%)

Query: 24  VVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
           +++R + R  Q  +A  LFD +     + D   Y+T++  + + G +  AI    +ME  
Sbjct: 186 LMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGI 245

Query: 84  RVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
            +   LV Y+ ++++  K+   + + + +   ++S G+  D    +T+I+  G+  +  E
Sbjct: 246 GLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDE 305

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           AR  + E++  G KP TV Y+++L ++ +   + EALS+  EM + NCP D  T N +  
Sbjct: 306 ARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAA 365

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            Y +     +   +  +M   G+ P+ ++Y T++  YG+A    +A+ LF  M+      
Sbjct: 366 TYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAP 425

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NV TYN+++ + GK    E    ++ EM+  G  PN  T++T++A+  + GK +    + 
Sbjct: 426 NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 485

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARA 378
           +++++ G E D   + T+I +Y R G    + ++  E+ +    P  T     +  LA  
Sbjct: 486 REMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHR 545

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G  + A  V +     G   + + +  ++  +S+      + +V +++     FP   ++
Sbjct: 546 GDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILL 605

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             ++ S  K R     +  + ++Q+ G      V   MLS++   K F+
Sbjct: 606 RTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFS 654



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 194/456 (42%), Gaps = 4/456 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L+   +A  +  A  +  EM      PD  TY+ L   + + G  D  +
Sbjct: 318 YKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGM 377

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + +  M    V  + + Y+ +I+   K      A+ +FS++K  G  P++  YN+++ + 
Sbjct: 378 AVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAML 437

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK    ++   ++ EM+  G  P+  +++T+L +  E  K      V  EM       D 
Sbjct: 438 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 497

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  Y +     D+ +++  M K G  P V +YN LL        +  A  + + 
Sbjct: 498 DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQD 557

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           MQ K  + N  +Y+ ++  Y K+        + +E+ +  + P+ I   T++    K   
Sbjct: 558 MQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRH 617

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L      F +L+  G + D V+  +M+  + R  + + A+ +LH +     QPN      
Sbjct: 618 LRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNC 677

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            + +  R     +A  V +   ++    D+  +  +I+ F R       I V  +M + G
Sbjct: 678 LMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKG 737

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             P        L+ Y  +  F+ A+++   M E  C
Sbjct: 738 IQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 773



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 193/417 (46%), Gaps = 9/417 (2%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M+ + G+      A  L + +  +    D  +Y+T+L+ Y  + K+  A+ +F +M  + 
Sbjct: 187 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIG 246

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
               L T N+M+DVYG+  M +   R   L   MR  G++    + +T++   G   +  
Sbjct: 247 LDPTLVTYNVMLDVYGK--MGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLD 304

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA      ++    +   V YN+M++++GK+  + +A ++++EM++    P++ITY+ + 
Sbjct: 305 EARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELA 364

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
           A + +AG LD    +   + S GV  + + Y T+I AY + G    A RL  +++     
Sbjct: 365 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCA 424

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN     + + +L +  R E+   V  +    G   + + +  M+ + S   K+  V +V
Sbjct: 425 PNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV 484

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M++ G+ PD      +++SY +      +  +Y EM + G       +  +L+    
Sbjct: 485 LREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAH 544

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
           R D+   ES+ + + +      +  + ++   Y +A  +    ++   +   + F S
Sbjct: 545 RGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPS 601



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 188/418 (44%), Gaps = 39/418 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P    YN +    +RA   +    + D M  +G+ P+  TY+T+I  +GK G  
Sbjct: 349 EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 408

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+    +M+    + ++  Y++++ +  K S     I +   +K +G  P+   +NTM
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 468

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + V  +         ++ EM+  G +PD  +++TL++ Y      V++  ++ EM +   
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
              +TT N +++        K A+ +   M+  G  P+  SY+ LL  Y +A        
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEK 588

Query: 243 --------ELFGEAI-------------HL------FRLMQRKEIEQNVVTYNTMIKIYG 275
                   ++F   I             HL      F  +Q+   + ++V  N+M+ ++ 
Sbjct: 589 VEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFS 648

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           ++    KA  ++  +   G++PN  TY+ ++ ++ +  +  +A  + + +++S  E D V
Sbjct: 649 RNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVV 708

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFR 389
            Y T+I  + R GL+  A R+L E+     QP  +   T ++  A     +EA  V R
Sbjct: 709 SYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIR 766



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 145/322 (45%), Gaps = 35/322 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++ ++P V  YN +L  +     W+ A  +  +M+ +G  P+  +YS L+ C+ K G   
Sbjct: 525 KSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAG--- 581

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  ++++E++   G                                + P  +   T++
Sbjct: 582 -NVRGIEKVEKEIYDGQ-------------------------------VFPSWILLRTLV 609

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K +  +      +++++ G KPD V  +++L+++  N  F +A  +   ++E    
Sbjct: 610 LSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQ 669

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +L T N ++D+Y + D    A+ +   ++    +P VVSYNT+++ +    L  EAI +
Sbjct: 670 PNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRV 729

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K I+  +VTYNT +  Y      ++A  +++ M      P+ +TY  ++  + K
Sbjct: 730 LSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCK 789

Query: 312 AGKLDRAAMLFQKLRSSGVEID 333
           AGK + A     K++   +  D
Sbjct: 790 AGKHEEAMDFVTKIKEIDISFD 811



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 136/272 (50%), Gaps = 7/272 (2%)

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F S + + +D  VV    ++R+ G       A  LF L+  ++   +V  Y T++  Y +
Sbjct: 171 FGSDQNLRLDNQVVEL--MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYAR 228

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK-LDRAAMLFQKLRSSGVEIDPV 335
           S ++++A +L  +M+  G++P  +TY+ ++ ++GK G+   R   L  ++RS G+E D  
Sbjct: 229 SGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEF 288

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
              T+I A  R G++  A++ L EL+    +P T+   + + +  +AG   EA  + ++ 
Sbjct: 289 TCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEM 348

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            D     D   +  +   + R       + V + M S G  P++     V+++YGK    
Sbjct: 349 EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 408

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           + A  L+S+M++ GC  +   +  +L++ G +
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYNSVLAMLGKK 440


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 231/469 (49%), Gaps = 9/469 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ +V AY  V+  + +  +   A  +FDEM+Q+GI P++Y+Y++LI+ F K   F  A+
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+      +   +   I    K  +  KAI  +  +KS GIVPD+VA N ++   
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K+     A+ +  E++  GV PDT++Y+ ++    +  KF EA+ +F +M E NC  D+
Sbjct: 451 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 510

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +ID   +     +A R+F+ +++M ++P+  +YNTLL   G      E +HL   
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N++TYNT++    K+     A +++  M  +G  P+  +Y+T+I    K  +
Sbjct: 571 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 630

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAI- 372
            + A  +F +++   +  D     T++ ++ ++GL+  A  ++ +   QP +    ++  
Sbjct: 631 YNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 689

Query: 373 ----TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                IL +AG IE++         +G   D      +I+   + KK     E+ +K +S
Sbjct: 690 SLMEGILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 748

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G    + +   ++         + A+ L++EM+E GC   D+  + +L
Sbjct: 749 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC-GPDEFTYNLL 796



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 224/471 (47%), Gaps = 4/471 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   + +EA    + + YN ++  ++++     A  ++  M   G+ P   TYS L
Sbjct: 142 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 201

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK    ++ +  L++ME   V  ++  Y+  I +  +   + +A  I +++++ G 
Sbjct: 202 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 261

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ +  +I V   A    +A+ +  +M++   KPD V+Y TLL+ + +N      + 
Sbjct: 262 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVME 321

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++     +ID   Q+    +A  +F  M++ GI P   SYN+L+  + 
Sbjct: 322 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 381

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A+ FG+A+ LF+ M     + N  T+   I  YGKS E  KA    + M+++GI P+ +
Sbjct: 382 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 441

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++    K+G+L  A  +F +L++ GV  D + Y  MI    +      A ++ +++
Sbjct: 442 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 501

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            + N +P   A    I  L +AGR +EA  +F Q  +         +  ++    R  K 
Sbjct: 502 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 561

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M  + Y P+      +L+   K      A D+   M  +GC+
Sbjct: 562 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 216/497 (43%), Gaps = 45/497 (9%)

Query: 11   EEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
            +E    P+   YN +L  + R  K  E+ H L +EM      P+  TY+T++ C  K G 
Sbjct: 537  KEMNLEPTDGTYNTLLAGLGREGKVKEVMH-LLEEMYHSNYPPNLITYNTILDCLCKNGA 595

Query: 70   FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             + A+  L  M       DL  Y+ +I    K   Y++A SIF ++K   ++PD     T
Sbjct: 596  VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCT 654

Query: 130  MINVFGKAKLFKEARLLIEE-MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++  F K  L KEA  +I++   + G K D  S  +L+   ++     +++  FAE+   
Sbjct: 655  ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE-FAEIIAS 713

Query: 189  N---------CPLDLTTC--------------------NIMIDVYGQL-------DMAKD 212
            +         CPL    C                    ++   +Y  L       ++   
Sbjct: 714  SGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDI 773

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A+ LF  M+++G  P   +YN LL   G++    E + +   M RK  E   VTYNT+I 
Sbjct: 774  AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 833

Query: 273  IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
               KS   E+A +L   + ++G  P   TY  ++    KAG+++ A  LF ++   G + 
Sbjct: 834  GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 893

Query: 333  DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVF 388
            +  +Y  ++  +   G       L  ++      P   + TI    L +AG++ +    F
Sbjct: 894  NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 953

Query: 389  RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            RQ  + G   D+  +  +I+   ++K+    + +F +M+  G  P+ +    ++   GK 
Sbjct: 954  RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1013

Query: 449  REFETADDLYSEMQEEG 465
             +   A  +Y E+  +G
Sbjct: 1014 GKAAEAGKMYEELLTKG 1030



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 198/461 (42%), Gaps = 41/461 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ +  +  T++ +    G EG   SA   L  M++  +  +   Y+ L+    
Sbjct: 112 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 171

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K     +A+ ++  +   G+VP +  Y+ ++  FGK +  +    L+ EM   GVKP+  
Sbjct: 172 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 231

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+  + +  +  +F EA  + A+M    C  D+ T  ++I V        DA  +FW M
Sbjct: 232 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291

Query: 221 RKMGIDPSVVSYNTLLRVYGE------------------------------------AEL 244
           +K    P  V+Y TLL  +G+                                      +
Sbjct: 292 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 351

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F EA+ +F  M++K I     +YN++I  + K+     A  L + M   G +PN  T+  
Sbjct: 352 F-EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 410

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
            I  +GK+G+  +A   ++ ++S G+  D V    ++    + G +  AKR+ HEL+   
Sbjct: 411 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI     I   ++A + +EA  +F    +   V D+     +I+   +  +     
Sbjct: 471 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAW 530

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +F +++     P       +L   G+  + +    L  EM
Sbjct: 531 RIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 571



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 151/309 (48%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            YN ++  ++     ++A GLF EM++ G  PD +TY+ L+   GK    +  +   ++M 
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 82   QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            +       V Y+ +I    K     +AI ++  L S G  P    Y  +++   KA   +
Sbjct: 818  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 142  EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            +A  L  EM E G K +   Y+ LLN +       +   +F +M +     D+ +  I+I
Sbjct: 878  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 937

Query: 202  DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
            D   +     D    F  + +MG++P +++YN L+   G+++   EA+ LF  MQ+K I 
Sbjct: 938  DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997

Query: 262  QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             N+ TYN++I   GK+ +  +A  + +E+  +G +PN  TY+ +I  +  +G  D A   
Sbjct: 998  PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAA 1057

Query: 322  FQKLRSSGV 330
            + ++   G 
Sbjct: 1058 YGRMIVGGC 1066



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 248/568 (43%), Gaps = 46/568 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  + V+++ +  A +   A  +F +M++    PDR TY TL+  FG  G   S +  
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 322

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+ D  + ++V Y+ +I+   ++    +A+ +F  +K  GIVP+  +YN++I+ F K
Sbjct: 323 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 382

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F +A  L + M   G KP+  ++   +N Y ++ + ++A+  +  M       D+  
Sbjct: 383 ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 442

Query: 197 CNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N ++      G+L MAK   R+F  ++ MG+ P  ++Y  +++   +A  F EA+ +F 
Sbjct: 443 GNAVLFGLAKSGRLGMAK---RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 499

Query: 254 LM---------------------------------QRKE--IEQNVVTYNTMIKIYGKSL 278
            M                                 Q KE  +E    TYNT++   G+  
Sbjct: 500 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 559

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++  +L++EM +    PN ITY+TI+    K G ++ A  +   + + G   D   Y 
Sbjct: 560 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYN 619

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAF-DA 394
           T+I    +      A  +  ++++   P+     T +    + G ++EA  + +  F   
Sbjct: 620 TVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQP 679

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D S    ++E   +       IE  E + S+G   D   +  ++    K ++   A
Sbjct: 680 GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA 739

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
            +L  + +  G      ++  ++         ++ E LF  +        +  ++++   
Sbjct: 740 HELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA 799

Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
             ++ R+ +  ++   M+ R+ + S+ V
Sbjct: 800 MGKSMRIEEMLKVQEEMH-RKGYESTYV 826



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 197/459 (42%), Gaps = 41/459 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P + +YN V+  +++ +++  A  +F +M++  + PD  T  T++  F K G+   A+  
Sbjct: 613  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 671

Query: 77   LQQM------EQDRVS--------------------GDLVLYSN-------LIELARKLS 103
            ++        + DR S                     +++  S        L  L + L 
Sbjct: 672  IKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLC 731

Query: 104  DYSKAIS---IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               KA+    +  + KS G+      YN++I       L   A  L  EM+E G  PD  
Sbjct: 732  KQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF 791

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y+ LL+   ++ +  E L V  EM+         T N +I    +    + A  L++++
Sbjct: 792  TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 851

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               G  P+  +Y  LL    +A    +A +LF  M     + N   YN ++  +  +   
Sbjct: 852  MSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 911

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            EK  +L Q+M ++GI P+  +Y+ II    KAG+L+     F++L   G+E D + Y  +
Sbjct: 912  EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLL 971

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGE 396
            I    +   +  A  L +E+++   +P      + I  L +AG+  EA  ++ +    G 
Sbjct: 972  IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1031

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              ++  +  +I  +S +    +    + +M   G  P+S
Sbjct: 1032 KPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1070



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/475 (20%), Positives = 213/475 (44%), Gaps = 20/475 (4%)

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + RV+      + ++EL R          +F  ++   +  ++  +  +    G     +
Sbjct: 83  KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 142

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A + +  M+E G+  +  +Y+ L+   V++    EAL V+  M        + T ++++
Sbjct: 143 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 202

Query: 202 DVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +G+    +D + + W +R+M   G+ P+V SY   +RV G+A+ F EA  +   M+ +
Sbjct: 203 VAFGK---RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 259

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
             + +V+T+  +I++   +     A ++  +M+    +P+ +TY T++  +G  G     
Sbjct: 260 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSV 319

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITI 374
             ++  +++ G   + V Y  +I A  +VG V  A  +  E++Q   +P +    + I+ 
Sbjct: 320 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 379

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +A R  +A  +F+     G   +       I  + ++ +    I+ +E M+S G  PD
Sbjct: 380 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 439

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESL 492
                 VL    K      A  ++ E++  G V  D + + M+      A K    ++  
Sbjct: 440 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIF 498

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI------MNRMNKRRTFNSSL 541
           ++ ++++   +   ++ ++  +Y +A R ++A RI      MN      T+N+ L
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLY-KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 552



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 35/288 (12%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y  +   YN ++  ++++++ E A  L+  +  +G +P   TY  L+    K G  + A 
Sbjct: 821  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +   +M +     +  +Y+ L+   R   +  K   +F  +   GI PD+ +Y  +I+  
Sbjct: 881  NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 940

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             KA    +      ++ E G++PD ++Y+ L++   ++ +  EA+S+F EM         
Sbjct: 941  CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM--------- 991

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                                      +K GI P++ +YN+L+   G+A    EA  ++  
Sbjct: 992  --------------------------QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1025

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +  K  + NV TYN +I+ Y  S   + A      M   G  PN+ TY
Sbjct: 1026 LLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 150/331 (45%), Gaps = 12/331 (3%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           A+  +R   + RK  +  +  S N +L +       G+   +F +MQR+ ++ NV T+  
Sbjct: 71  AEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAA 130

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-LFQKLRSS 328
           +    G       A   +  M+  GI  NA TY+ ++    K+G  DR A+ +++ +   
Sbjct: 131 IFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYRVMMVD 189

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV      Y  ++VA+ +   V     LL E+     +PN       I +L +A R +EA
Sbjct: 190 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 249

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  +  + G   D+     +I++     + ++  +VF KM+ +   PD      +L+ 
Sbjct: 250 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 309

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV---HFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +G   + ++  ++++ M+ +G  ++D V      + +L    + F  LE +F+ +     
Sbjct: 310 FGDNGDSQSVMEIWNAMKADG--YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGI 366

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMN 532
           + ++  ++ +   + +A+R  DA  +   M+
Sbjct: 367 VPEQYSYNSLISGFLKADRFGDALELFKHMD 397



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E    P +  YN+++  + ++K+ E A  LF+EM+++GI P+ YTY++LI   GK G   
Sbjct: 958  EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1017

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    +++       ++  Y+ LI           A + + R+   G +P+   Y  + 
Sbjct: 1018 EAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLP 1077

Query: 132  N 132
            N
Sbjct: 1078 N 1078


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 224/470 (47%), Gaps = 6/470 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYST 59
           R++ I + + E     P++  YNV+L    +  + W +   L DEMR +G+  D +T +T
Sbjct: 255 RAIEIFEKMKETG-LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTT 313

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           +I+  G+EG+ D A  +   ++ +        Y++++++  K   Y++A++I   ++ + 
Sbjct: 314 VISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNN 373

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD + YN ++  + +A    E   +I+ M  +GV P+ ++Y+T++N Y +     +AL
Sbjct: 374 CEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKAL 433

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            VF +M E+ C  ++ T N ++ + G+   ++D  ++   M+  G  P  +++NT+L V 
Sbjct: 434 EVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVC 493

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           GE         + R M+    E +  T+NT+I  YG+         +  EM   G  P  
Sbjct: 494 GEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCI 553

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+ ++    + G    A  +   +R  G + +   Y  ++  Y + G V   +++  E
Sbjct: 554 TTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEME 613

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +   +  P      T +    +  +++     F Q  + G   D+ V   M+ +F RN+K
Sbjct: 614 IYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQK 673

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                E+ + +  +G  P+      +++ Y ++ +   A+++  ++Q  G
Sbjct: 674 LEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 221/501 (44%), Gaps = 46/501 (9%)

Query: 25  VLRNVLRAKQWELAHGLFD----EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +L+ +  +  WE A  LF+          +  D  +   ++   G+E  +  A      +
Sbjct: 169 LLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDII 228

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK---- 136
             +  S D+   + ++    +   Y +AI IF ++K +G+ P LV YN M++V+GK    
Sbjct: 229 PVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRA 288

Query: 137 --------------------------------AKLFKEARLLIEEMREQGVKPDTVSYST 164
                                             +  EAR   ++++  G KP T +Y++
Sbjct: 289 WSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNS 348

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +L ++ +   + EAL++  EM + NC  D  T N ++  Y +     +   +  +M   G
Sbjct: 349 MLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG 408

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P+ ++Y T++  YG+A    +A+ +F  M+      NV TYN ++ + GK    E   
Sbjct: 409 VMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMI 468

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++ +M+  G  P+ IT++T++A+ G+ GK    + + +++++ G E D   + T+I AY
Sbjct: 469 KILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAY 528

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDI 400
            R G      ++  E+      P  T     +  LAR G  + A  V       G   + 
Sbjct: 529 GRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNE 588

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETADDLYS 459
           + +  ++  +S+      + +V  ++     FP   ++  LVL +Y K R+ +  +  + 
Sbjct: 589 TSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNY-KCRQLKGMERAFH 647

Query: 460 EMQEEGCVFSDQVHFQMLSLY 480
           ++Q  G      V   MLS++
Sbjct: 648 QLQNNGYKLDMVVINSMLSMF 668



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 172/359 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN VL  + +  + E    +  +M+  G  PDR T++T++   G++G        
Sbjct: 446 PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV 505

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M+      D   ++ LI    +         ++  + ++G  P +  YN ++N   +
Sbjct: 506 LREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALAR 565

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K A  ++ +MR++G KP+  SYS LL+ Y +         V  E+ + +       
Sbjct: 566 RGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWML 625

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++    +    K  +R F  ++  G    +V  N++L ++   +   +A  +  ++ 
Sbjct: 626 LRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIH 685

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N+VTYN++I +Y +  +  KA  +++++QN GI P+ ++Y+T+I  + K G + 
Sbjct: 686 VSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQ 745

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            A  +  ++ ++GV+  P+ + T +  Y   GL A A  ++  + +   +P E    I+
Sbjct: 746 EAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIV 804



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 35/321 (10%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A ++P +  YN +L  + R   W+ A  +  +MR++G  P+  +YS L+ C+ K G    
Sbjct: 547 AGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAG---- 602

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            +  L+++E +   G                                + P  +   T++ 
Sbjct: 603 NVRGLEKVEMEIYDGH-------------------------------VFPSWMLLRTLVL 631

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K +  K       +++  G K D V  +++L+++V N K  +A  +   ++      
Sbjct: 632 TNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQP 691

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +L T N +ID+Y ++     A+ +   ++  GI P VVSYNT+++ + +  L  EAI + 
Sbjct: 692 NLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRIL 751

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M    ++   +T+NT +  Y  +    +A  +++ M   G  PN +TY  +I  + KA
Sbjct: 752 SEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKA 811

Query: 313 GKLDRAAMLFQKLRSSGVEID 333
            K   A     K++   +  D
Sbjct: 812 KKHKEAMDFVSKIKEIDISFD 832



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 142/291 (48%), Gaps = 16/291 (5%)

Query: 207 LDMAKDADRLF---------WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           LD++ + +R F         +    M +D   V +  ++++ G    +  A  LF ++  
Sbjct: 173 LDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEF--MVKMLGRESQYSIASKLFDIIPV 230

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +E   +V    T++  Y ++ ++++A  + ++M+  G++P  +TY+ ++ ++GK G+   
Sbjct: 231 EEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWS 290

Query: 318 AAM-LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
             + L  ++RS G+E D     T+I A  R G++  A+R   +L+    +P T    + +
Sbjct: 291 MILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSML 350

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            +  +AG   EA  + ++  D     D   +  ++  + R   +     V + M S G  
Sbjct: 351 QVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVM 410

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           P++     V+N+YGK  + + A +++ +M+E GCV +   +  +L L G R
Sbjct: 411 PNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKR 461


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 216/470 (45%), Gaps = 16/470 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +     ++R   R  + + A  + + + Q G  PD  TY+ LI+ + K G  D+A+  
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L +M    V+ D+V Y+ ++   R L D  K   A+ +  R       PD++ Y  +I  
Sbjct: 207 LDRMN---VAPDVVTYNTIL---RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 260

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K     +A  L++EMR +G KPD V+Y+ L+N   +  +  EA+     M    C  +
Sbjct: 261 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 320

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA++L   M + G  PSVV++N L+       L G AI +  
Sbjct: 321 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 380

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       N ++YN ++  + K  + ++A   +  M +RG  P+ +TY+T++    K G
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K+D A  +  +L S G     + Y T+I    +VG    A +LL E+R    +P+ I   
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + ++ L+R G+++EA   F      G   +   +  ++    ++++    I+    M S 
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV---FSDQVHFQM 476
              P      +++         + A DL +E+   G V    ++QV  +M
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 183/380 (48%), Gaps = 7/380 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I E++   P V  YNV++    ++ + + A  + D M    +APD  TY+T++      G
Sbjct: 174 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSG 230

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+  L +  Q     D++ Y+ LIE   K S   +A+ +   +++ G  PD+V YN
Sbjct: 231 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 290

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +IN   K     EA   +  M   G +P+ ++++ +L       ++++A  + ++M   
Sbjct: 291 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 350

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C   + T NI+I+   +  +   A  +   M   G  P+ +SYN LL  + + +    A
Sbjct: 351 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 410

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           I    +M  +    ++VTYNT++    K  + + A  ++ ++ ++G  P  ITY+T+I  
Sbjct: 411 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 470

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             K GK +RA  L  ++R  G++ D + Y +++    R G V  A +  H+L     +PN
Sbjct: 471 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 530

Query: 365 TIPRETAITILARAGRIEEA 384
            I   + +  L ++ + + A
Sbjct: 531 AITYNSIMLGLCKSRQTDRA 550



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 188/440 (42%), Gaps = 42/440 (9%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G  +    +L+ M       D++  ++LI    ++    KA  +   L+ SG VPD++
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN +I+ + K+     A  +++ M    V PD V+Y+T+L    ++ K  +A+ V    
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +  C  D+ T  I+I+   +      A +L   MR  G  P VV+YN L+    +    
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEK-------------------- 282
            EAI     M     + NV+T+N +++     G+ ++ EK                    
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 283 ------------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                       A +++++M   G  PN+++Y+ ++  + K  K+DRA      + S G 
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
             D V Y T++ A  + G V  A  +L++L      P  I   T I  L++ G+ E A  
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   DI  +  ++   SR  K    I+ F  +   G  P++     ++    
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 447 KLREFETADDLYSEMQEEGC 466
           K R+ + A D  + M  + C
Sbjct: 543 KSRQTDRAIDFLAYMISKRC 562



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ IL+ +      +P+  +YN +L    + K+ + A    D M  RG  PD  TY+TL
Sbjct: 374 RAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 432

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +T   K+G  D A+  L Q+     S  L+ Y+ +I+   K+    +AI +   ++  G+
Sbjct: 433 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 492

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ Y+++++   +     EA     ++   G++P+ ++Y++++    ++ +   A+ 
Sbjct: 493 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 552

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
             A M    C     T  I+I+      +AK+A  L   +   G+
Sbjct: 553 FLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 231/469 (49%), Gaps = 9/469 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ +V AY  V+  + +  +   A  +FDEM+Q+GI P++Y+Y++LI+ F K   F  A+
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+      +   +   I    K  +  KAI  +  +KS GIVPD+VA N ++   
Sbjct: 426 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 485

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K+     A+ +  E++  GV PDT++Y+ ++    +  KF EA+ +F +M E NC  D+
Sbjct: 486 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 545

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +ID   +     +A R+F+ +++M ++P+  +YNTLL   G      E +HL   
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N++TYNT++    K+     A +++  M  +G  P+  +Y+T+I    K  +
Sbjct: 606 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 665

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAI- 372
            + A  +F +++   +  D     T++ ++ ++GL+  A  ++ +   QP +    ++  
Sbjct: 666 YNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 724

Query: 373 ----TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                IL +AG IE++         +G   D      +I+   + KK     E+ +K +S
Sbjct: 725 SLMEGILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 783

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G    + +   ++         + A+ L++EM+E GC   D+  + +L
Sbjct: 784 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC-GPDEFTYNLL 831



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 224/471 (47%), Gaps = 4/471 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   + +EA    + + YN ++  ++++     A  ++  M   G+ P   TYS L
Sbjct: 177 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 236

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK    ++ +  L++ME   V  ++  Y+  I +  +   + +A  I +++++ G 
Sbjct: 237 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 296

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ +  +I V   A    +A+ +  +M++   KPD V+Y TLL+ + +N      + 
Sbjct: 297 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVME 356

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++     +ID   Q+    +A  +F  M++ GI P   SYN+L+  + 
Sbjct: 357 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 416

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A+ FG+A+ LF+ M     + N  T+   I  YGKS E  KA    + M+++GI P+ +
Sbjct: 417 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 476

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++    K+G+L  A  +F +L++ GV  D + Y  MI    +      A ++ +++
Sbjct: 477 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 536

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            + N +P   A    I  L +AGR +EA  +F Q  +         +  ++    R  K 
Sbjct: 537 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 596

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M  + Y P+      +L+   K      A D+   M  +GC+
Sbjct: 597 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 647



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 207/456 (45%), Gaps = 8/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V A N VL  + ++ +  +A  +F E++  G++PD  TY+ +I C  K   FD A+  
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M ++    D++  ++LI+   K     +A  IF +LK   + P    YNT++   G+
Sbjct: 533 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 592

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KE   L+EEM      P+ ++Y+T+L+   +N    +AL +   M    C  DL++
Sbjct: 593 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 652

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR--L 254
            N +I    + +   +A  +F  M+K+ I P   +  T+L  + +  L  EA+H+ +   
Sbjct: 653 YNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYF 711

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +Q          ++ M  I  K+   EK+    + + + GI  +      +I    K  K
Sbjct: 712 LQPGSKTDRSSCHSLMEGILKKA-GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 770

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  L +K +S GV +   LY ++I       L+  A+ L  E+++    P E    +
Sbjct: 771 ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 830

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     ++ RIEE   V  +    G       +  +I    ++++    I+++  + S G
Sbjct: 831 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 890

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + P       +L+   K    E A++L++EM E GC
Sbjct: 891 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 926



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 198/461 (42%), Gaps = 41/461 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ +  +  T++ +    G EG   SA   L  M++  +  +   Y+ L+    
Sbjct: 147 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 206

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K     +A+ ++  +   G+VP +  Y+ ++  FGK +  +    L+ EM   GVKP+  
Sbjct: 207 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 266

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+  + +  +  +F EA  + A+M    C  D+ T  ++I V        DA  +FW M
Sbjct: 267 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326

Query: 221 RKMGIDPSVVSYNTLLRVYGE------------------------------------AEL 244
           +K    P  V+Y TLL  +G+                                      +
Sbjct: 327 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 386

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F EA+ +F  M++K I     +YN++I  + K+     A  L + M   G +PN  T+  
Sbjct: 387 F-EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 445

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
            I  +GK+G+  +A   ++ ++S G+  D V    ++    + G +  AKR+ HEL+   
Sbjct: 446 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 505

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI     I   ++A + +EA  +F    +   V D+     +I+   +  +     
Sbjct: 506 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAW 565

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +F +++     P       +L   G+  + +    L  EM
Sbjct: 566 RIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 606



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/568 (21%), Positives = 248/568 (43%), Gaps = 46/568 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  + V+++ +  A +   A  +F +M++    PDR TY TL+  FG  G   S +  
Sbjct: 298 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 357

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+ D  + ++V Y+ +I+   ++    +A+ +F  +K  GIVP+  +YN++I+ F K
Sbjct: 358 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 417

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F +A  L + M   G KP+  ++   +N Y ++ + ++A+  +  M       D+  
Sbjct: 418 ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 477

Query: 197 CNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N ++      G+L MAK   R+F  ++ MG+ P  ++Y  +++   +A  F EA+ +F 
Sbjct: 478 GNAVLFGLAKSGRLGMAK---RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 534

Query: 254 LM---------------------------------QRKE--IEQNVVTYNTMIKIYGKSL 278
            M                                 Q KE  +E    TYNT++   G+  
Sbjct: 535 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 594

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++  +L++EM +    PN ITY+TI+    K G ++ A  +   + + G   D   Y 
Sbjct: 595 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYN 654

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAF-DA 394
           T+I    +      A  +  ++++   P+     T +    + G ++EA  + +  F   
Sbjct: 655 TVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQP 714

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D S    ++E   +       IE  E + S+G   D   +  ++    K ++   A
Sbjct: 715 GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA 774

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
            +L  + +  G      ++  ++         ++ E LF  +        +  ++++   
Sbjct: 775 HELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA 834

Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
             ++ R+ +  ++   M+ R+ + S+ V
Sbjct: 835 MGKSMRIEEMLKVQEEMH-RKGYESTYV 861



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 181/413 (43%), Gaps = 26/413 (6%)

Query: 11  EEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           +E    P+   YN +L  + R  K  E+ H L +EM      P+  TY+T++ C  K G 
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMH-LLEEMYHSNYPPNLITYNTILDCLCKNGA 630

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A+  L  M       DL  Y+ +I    K   Y++A SIF ++K   ++PD     T
Sbjct: 631 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCT 689

Query: 130 MINVFGKAKLFKEARLLIEE-MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++  F K  L KEA  +I++   + G K D  S  +L+   ++     +++  FAE+   
Sbjct: 690 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE-FAEIIAS 748

Query: 189 N---------CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           +         CPL    C        +   A +A  L    +  G+      YN+L+   
Sbjct: 749 SGITLDDFFLCPLIKHLC--------KQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 800

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +  L   A  LF  M+      +  TYN ++   GKS+  E+   + +EM  +G E   
Sbjct: 801 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 860

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +TY+TII+   K+ +L++A  L+  L S G    P  Y  ++    + G +  A+ L +E
Sbjct: 861 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920

Query: 360 LRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           + +       T   IL      AG  E+   +F+   D G   DI  +  +I+
Sbjct: 921 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/475 (20%), Positives = 213/475 (44%), Gaps = 20/475 (4%)

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + RV+      + ++EL R          +F  ++   +  ++  +  +    G     +
Sbjct: 118 KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 177

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A + +  M+E G+  +  +Y+ L+   V++    EAL V+  M        + T ++++
Sbjct: 178 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 237

Query: 202 DVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +G+    +D + + W +R+M   G+ P+V SY   +RV G+A+ F EA  +   M+ +
Sbjct: 238 VAFGK---RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 294

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
             + +V+T+  +I++   +     A ++  +M+    +P+ +TY T++  +G  G     
Sbjct: 295 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSV 354

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITI 374
             ++  +++ G   + V Y  +I A  +VG V  A  +  E++Q   +P +    + I+ 
Sbjct: 355 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 414

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +A R  +A  +F+     G   +       I  + ++ +    I+ +E M+S G  PD
Sbjct: 415 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 474

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESL 492
                 VL    K      A  ++ E++  G V  D + + M+      A K    ++  
Sbjct: 475 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIF 533

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI------MNRMNKRRTFNSSL 541
           ++ ++++   +   ++ ++  +Y +A R ++A RI      MN      T+N+ L
Sbjct: 534 YDMIENNCVPDVLAVNSLIDTLY-KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 587



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 150/331 (45%), Gaps = 12/331 (3%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           A+  +R   + RK  +  +  S N +L +       G+   +F +MQR+ ++ NV T+  
Sbjct: 106 AEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAA 165

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-LFQKLRSS 328
           +    G       A   +  M+  GI  NA TY+ ++    K+G  DR A+ +++ +   
Sbjct: 166 IFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYRVMMVD 224

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV      Y  ++VA+ +   V     LL E+     +PN       I +L +A R +EA
Sbjct: 225 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 284

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  +  + G   D+     +I++     + ++  +VF KM+ +   PD      +L+ 
Sbjct: 285 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 344

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV---HFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +G   + ++  ++++ M+ +G  ++D V      + +L    + F  LE +F+ +     
Sbjct: 345 FGDNGDSQSVMEIWNAMKADG--YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGI 401

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMN 532
           + ++  ++ +   + +A+R  DA  +   M+
Sbjct: 402 VPEQYSYNSLISGFLKADRFGDALELFKHMD 432


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 210/471 (44%), Gaps = 42/471 (8%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYST 59
           ++VAI   I    +  P+  AYN ++  ++   ++E  H L++EM   G   PD  TYS 
Sbjct: 173 KAVAIFYQIKAR-KCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSA 231

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI+ F K G  DSAI  L +M+ + +     +Y+ L+ L  KL +   A+ +F  ++   
Sbjct: 232 LISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY 291

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD+  Y  +I   GKA    EA     EMR +G +PDTV  + ++N   +  +  +A+
Sbjct: 292 CRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAI 351

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F EM  + C                                    PSVV+YNT+++  
Sbjct: 352 KLFEEMETLRCI-----------------------------------PSVVTYNTIIKAL 376

Query: 240 GEAE-LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            E++    E    F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P 
Sbjct: 377 FESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPC 436

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
              Y ++I   GKA + D A  LFQ+L+ +       +Y  MI    + G +  A  L  
Sbjct: 437 PAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFD 496

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+ +    PN       ++ LARAG ++EA    R+  D G + DI+ +  ++   ++  
Sbjct: 497 EMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                + +   M+ +   PD+     VL +      FE A  L  EM   G
Sbjct: 557 GPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIG 607



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 222/500 (44%), Gaps = 19/500 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           R+R    D  TY  LI C      +      +Q+M ++ V   +V    L ++ R L + 
Sbjct: 111 RKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVC--VVTPMELSDIIRMLGNA 168

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
              SKA++IF ++K+    P   AYN+MI +      +++   L  EM  +G   PDTV+
Sbjct: 169 KMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVT 228

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM +           +++ +  +LD    A  LF  MR
Sbjct: 229 YSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMR 288

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                P V +Y  L+R  G+A    EA + F  M+R+    + V  N MI   GK+   +
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLD 348

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            A  L +EM+     P+ +TY+TII A++    ++   +  F++++ SG+   P  Y  +
Sbjct: 349 DAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSIL 408

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  + +      A  LL E+ +    P   A    I  L +A R + A  +F++  +   
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCG 468

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+   +  +  + +++F++M   G  P+ +    +++   +    + A  
Sbjct: 469 SSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALT 528

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLY----GARKDFNMLESLFERLDSDSNINKKELHHVVA 512
               MQ+ GC+     +  +L+      G  +   ML ++ +       ++    ++ V 
Sbjct: 529 TMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVS----YNTVL 584

Query: 513 GIYERANRLNDASRIMNRMN 532
           G    A    +A+++M  MN
Sbjct: 585 GALSHAGMFEEAAKLMKEMN 604



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 164/376 (43%), Gaps = 74/376 (19%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R+    P VF Y  ++R + +A + + A+  F EMR+ G  PD    + +I   GK 
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA 344

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D AI   ++ME  R    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 345 GRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFT 404

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY-------VENHKFVE-- 177
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++         + N  F E  
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELK 464

Query: 178 --------------------------ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
                                     A+ +F EMN + C                     
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGC--------------------- 503

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
                          P+V +YN L+     A +  EA+   R MQ      ++ +YN ++
Sbjct: 504 --------------TPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIIL 549

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               K+   ++A  ++  M+   I+P+A++Y+T++     AG  + AA L +++ + G +
Sbjct: 550 NALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFD 609

Query: 332 IDPVLYQTMIVAYERV 347
            D + Y +++ A  +V
Sbjct: 610 YDLITYSSILEAIGKV 625



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/393 (21%), Positives = 180/393 (45%), Gaps = 13/393 (3%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE----VNCPLDLTTCNIMIDVYGQ 206
           R++  + DT +Y  L+       ++ E   +  EM      V  P++L+    +I + G 
Sbjct: 111 RKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSD---IIRMLGN 167

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVV 265
             M   A  +F+ ++     P+  +YN+++ +      + +   L+  M  + +   + V
Sbjct: 168 AKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTV 227

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+ +I  + K    + A  L+ EM++ G++P A  Y+ ++A+  K   +  A  LF+++
Sbjct: 228 TYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEM 287

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           R      D   Y  +I    + G +  A    HE+R+    P+T+     I  L +AGR+
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRL 347

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           ++A  +F +      +  +  +  +I+ LF    + + +   FE+M+ +G  P     ++
Sbjct: 348 DDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSI 407

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           +++ + K    E A  L  EM E+G       +  ++   G  K +++   LF+ L  + 
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENC 467

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             +   ++ V+     +A RL+DA  + + MN+
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNR 500



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 109/228 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS F Y++++    +  + E A  L +EM ++G  P    Y +LI   GK   +D A  
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANE 458

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q+++++  S    +Y+ +I+   K      A+ +F  +   G  P++ AYN +++   
Sbjct: 459 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLA 518

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A +  EA   +  M++ G  PD  SY+ +LN   +      A+ +   M +     D  
Sbjct: 519 RAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAV 578

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           + N ++       M ++A +L   M  +G D  +++Y+++L   G+ +
Sbjct: 579 SYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVD 626



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK+++LA+ LF E+++   +     Y+ +
Sbjct: 420 KAMMLLEEMDEKG-FPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVM 478

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G  D A+    +M +   + ++  Y+ L+    +     +A++   R++  G 
Sbjct: 479 IKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGC 538

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++N   K      A  ++  M++  +KPD VSY+T+L        F EA  
Sbjct: 539 IPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAK 598

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN +    DL T + +++  G++D
Sbjct: 599 LMKEMNAIGFDYDLITYSSILEAIGKVD 626


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 241/489 (49%), Gaps = 32/489 (6%)

Query: 37  LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           +A  +F+     G     Y +S LI+ +G+ G+ + AIS    M++  +  +LV Y+ +I
Sbjct: 251 IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310

Query: 97  ELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           +   K   ++ +    F  ++ +G+ PD + +N+++ V  +  L++ AR L +EM  + +
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           + D  SY+TLL+   +  +   A  + A+M       ++ + + +ID + +     +A  
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR +GI    VSYNTLL +Y +     EA+ + R M    I+++VVTYN ++  YG
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++++   +  EM+   + PN +TYST+I  + K G    A  +F++ +S+G+  D V
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA------------G 379
           LY  +I A  + GLV  A  L+ E+ +    PN +   + I    R+            G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCM-IELFSRNKK--------YANVIEVFEKMRSAG 430
            +  ++       +    + I +FG +  E  +R  K         + ++EVF KM    
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML- 489
             P+    + +LN+  +   FE A  L  E++    +F ++V+  +  L   +++   L 
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLMGQRENVWLQ 726

Query: 490 -ESLFERLD 497
            +SLF++++
Sbjct: 727 AQSLFDKVN 735



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 172/304 (56%), Gaps = 1/304 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN V+    +   +++     FDEM++ G+ PDR T+++L+    + G++++A +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M   R+  D+  Y+ L++   K      A  I +++    I+P++V+Y+T+I+ F 
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA  F EA  L  EMR  G+  D VSY+TLL++Y +  +  EAL +  EM  V    D+ 
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++  YG+     +  ++F  M++  + P++++Y+TL+  Y +  L+ EA+ +FR  
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  +VV Y+ +I    K+     A +L+ EM   GI PN +TY++II  +G++  +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600

Query: 316 DRAA 319
           DR+A
Sbjct: 601 DRSA 604



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 12/375 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N +L    R   WE A  LFDEM  R I  D ++Y+TL+    K G  D A   
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM   R+  ++V YS +I+   K   + +A+++F  ++  GI  D V+YNT+++++ K
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  ++ EM   G+K D V+Y+ LL  Y +  K+ E   VF EM   +   +L T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y +  + K+A  +F   +  G+   VV Y+ L+    +  L G A+ L   M 
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ I  NVVTYN++I  +G+S   +++     +  N G  P   + S + A+    G  +
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSA----DYSNGGSLP--FSSSALSALTETEG--N 628

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITIL 375
           R   LF +L +   E +    +      + +  +    R +H+L  +PN +     +   
Sbjct: 629 RVIQLFGQLTT---ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685

Query: 376 ARAGRIEEATWVFRQ 390
           +R    E+A+ +  +
Sbjct: 686 SRCNSFEDASMLLEE 700



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 202/428 (47%), Gaps = 9/428 (2%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ--QMEQDRVSGDLVLYS 93
           E+ H L      +    D  TY  +I   G     D A+ + +     + R +    L S
Sbjct: 180 EMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS 237

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            +I    +    + A  IF    + G    + A++ +I+ +G++ L +EA  +   M+E 
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297

Query: 154 GVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G++P+ V+Y+ +++   +   +F +    F EM       D  T N ++ V  +  + + 
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A  LF  M    I+  V SYNTLL    +      A  +   M  K I  NVV+Y+T+I 
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + K+   ++A NL  EM+  GI  + ++Y+T+++I+ K G+ + A  + +++ S G++ 
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D V Y  ++  Y + G     K++  E+++    PN +   T I   ++ G  +EA  +F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           R+   AG   D+ ++  +I+   +N    + + + ++M   G  P+      +++++G+ 
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597

Query: 449 REFETADD 456
              + + D
Sbjct: 598 ATMDRSAD 605



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R    VF+YN +L  + +  Q +LA  +  +M  + I P+  +YST+I  F K G FD A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++   +M    ++ D V Y+ L+ +  K+    +A+ I   + S GI  D+V YN ++  
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +GK   + E + +  EM+ + V P+ ++YSTL++ Y +   + EA+ +F E        D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF-------- 245
           +   + +ID   +  +   A  L   M K GI P+VV+YN+++  +G +           
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608

Query: 246 GEAIHLFR--LMQRKEIEQNVVTYNTMIKIYGK-SLEHEKATNL-----MQE-------- 289
           G ++      L    E E N V     I+++G+ + E    T       MQE        
Sbjct: 609 GGSLPFSSSALSALTETEGNRV-----IQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663

Query: 290 --MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M    I+PN +T+S I+    +    + A+ML ++LR    ++  V++  ++   E V
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENV 723

Query: 348 GLVAHA 353
            L A +
Sbjct: 724 WLQAQS 729



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 5/270 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI   G+      A R+F +    G   +V +++ L+  YG + L  EAI +F  M+   
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 260 IEQNVVTYNTMIKIYGKS-LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +  N+VTYN +I   GK  +E ++      EMQ  G++P+ IT+++++A+  + G  + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             LF ++ +  +E D   Y T++ A  + G +  A  +L ++      PN +   T I  
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+AGR +EA  +F +    G   D   +  ++ ++++  +    +++  +M S G   D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEE 464
                 +L  YGK  +++    +++EM+ E
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 209/454 (46%), Gaps = 7/454 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L +I EE  + P    +N ++  + R    +    + D M ++G   D YTY++LI+   
Sbjct: 289 LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G  D A+  L  M       + V Y+ LI    K +    A  +   L S G++PD+ 
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +N++I         + A  L EEM+E+G  PD  +YS L+       +  EAL +  EM
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
               C  ++   N +ID   + +   DA+ +F  M  +G+  S V+YNTL+    +++  
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA  L   M  + ++ +  TY TM+K + +  + ++A +++Q M   G EP+ +TY T+
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I    KAG++D A+ L + ++  G+ + P  Y  +I A  +      A RL  E+ +   
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGD 648

Query: 366 IPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            P      I+ R      G I+EA     +  + G + +   FG + E          +I
Sbjct: 649 PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLI 708

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           ++   +   G F  S     ++  + K+++F  A
Sbjct: 709 QLINMVMEKGRFSQSE--TSIIRGFLKIQKFNDA 740



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 239/535 (44%), Gaps = 12/535 (2%)

Query: 2   SVAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           ++++  W + +  YS  PSVF  + +LR + RA  ++    L  +M    I  D  T+  
Sbjct: 75  ALSLFQWASAQPNYSAHPSVF--HELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLI 132

Query: 60  LITCFGKEGMFDSAISWL-QQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
            +  +       + I+ L   ME+D  V  D   Y+  + L  K +      ++ S++ +
Sbjct: 133 FLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVA 192

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
             + PD+  +N +I    KA   + A L++E+M   G++PD  +++TL+  ++E      
Sbjct: 193 DAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEG 252

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           AL +   M E  C L   + N++++   +    ++A R  +   + G  P  V++N L+ 
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY--EEEGFCPDQVTFNALVN 310

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
                    + + +   M  K  E +V TYN++I    K  E ++A  ++  M +R  EP
Sbjct: 311 GLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEP 370

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+T+I    K   ++ A  L + L S GV  D   + ++I           A  L 
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELF 430

Query: 358 HELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+++    P E   +IL  +     R++EA  + ++   +G  +++ V+  +I+   +N
Sbjct: 431 EEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKN 490

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +  +  ++F++M   G    S     ++N   K +  E A  L  +M  EG       +
Sbjct: 491 NRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
             ML  +  + D      + + +  +        +  + G   +A R++ AS+++
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 197/385 (51%), Gaps = 4/385 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +    P++ A N+VL  +++  +++    ++ +M  RG +P+  TY TLI    ++
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G F  A     +M + ++   +V+Y+ LI      S  S+A S+F  +++SG++P+L  Y
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           NTM++ + K    K+A  L +EM   G+ P+ V++  L++   +  + V A     +M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                ++   N +ID Y +     +A  L   + K  I P V +Y+ L++     +   E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L + M++K    N VTYNT+I  Y K    EKA  +  +M  +GIEPN IT+ST+I 
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            + KAGK++ A  L+ ++   G+  D V Y  +I  + + G    A RL  E+++    P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 364 NTIPRETAITILARAGRIEEATWVF 388
           N       I  L + GRI +A  +F
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 4/350 (1%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           ++P + A N +++   K   F     +  +M  +G  P+ V+Y TL++       F++A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F EM E      +    I+I          +A+ +F +MR  G+ P++ +YNT++  Y
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +     +A+ L++ M    +  NVVT+  +I    K+ E   A   + +M + G+ PN 
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+ +I  + KAG L  A  L  ++    +  D   Y  +I     V  +  A  LL E
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +++    PN +   T I    + G +E+A  V  Q  + G   +I  F  +I+ + +  K
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               + ++ +M   G  PD      +++ + K    + A  L+ EMQE G
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 92/414 (22%), Positives = 167/414 (40%), Gaps = 30/414 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V AY  ++    +    + A  L  EM++ G+ P+ +T S LI    K+G    AI  
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSD-YSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                    +G     S   EL R L    S A+S+F  +    I    V      N   
Sbjct: 531 FLAKTGTDTTG-----SKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQP 585

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA L               +KP   + +  L  Y+++    + L  F  +   N P  + 
Sbjct: 586 KAHLHTH------------LKPPKSNQT--LKRYLQSSNTSKVLLFFRILLRKN-PSSID 630

Query: 196 TCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + ++M  +      +   +  ++   +   G +P +    +L+ +Y       +A ++F 
Sbjct: 631 SFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFD 690

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K    N++++ ++I  Y  +    KA  L ++MQ   ++P+ +T +  ++     G
Sbjct: 691 EIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLG 746

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            LD    +   +R  G++ D  L  ++I  Y + G +  A+R    L  PN +     + 
Sbjct: 747 ALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF--SLVLPNDVTFMGVLM 804

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVFEKM 426
             + AG +EE    FR   +   ++  IS FGCM++L  R        E   KM
Sbjct: 805 ACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 858



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/231 (17%), Positives = 99/231 (42%), Gaps = 12/231 (5%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P +    ++I+++       +A  + +E+  + +    +S++++++ YV+N +  +A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKA 716

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +F +M   +   D+ T  + +     L      + +   +R  G+D  +   N+L+ +
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           Y +    G A   F L+    +  +V     ++      L  E   +     ++  + P 
Sbjct: 777 YSKCGEIGTA-RRFSLV----LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPR 831

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
              +  ++ +  +AG L  A     K+    V  + V+++T++ A    G+
Sbjct: 832 ISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGM 879



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           AH +FDE+  + +     +++++I+ +      + A+   +QM+ D V  D+V  +  + 
Sbjct: 685 AHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALS 740

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
               L        I + ++  G+  DL   N++IN++ K      AR      R   V P
Sbjct: 741 ACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR------RFSLVLP 794

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           + V++  +L          E    F  M E  +    ++    M+D+  +  +  +A   
Sbjct: 795 NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA--- 851

Query: 217 FWSMRKMGIDPSVVSYNTLL 236
           +  + KM + P+ V + TLL
Sbjct: 852 YEFILKMPVRPNAVVWRTLL 871



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 40/224 (17%), Positives = 94/224 (41%), Gaps = 22/224 (9%)

Query: 247 EAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           +A+ LF  + R+ ++ +N   Y+ +I +   +  + KA  LM+++       N+      
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQ--CLQNSRRSRIC 109

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
            +++           +  +L SS  +  P ++  +I+A+  +GLV  A  + +++   + 
Sbjct: 110 CSVFN----------VLSRLESS--KFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DV 154

Query: 366 IPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +P   A  +    L + GR +    V+      G   ++  +G +I+   R   +     
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +F++M     FP   I  +++           A+ ++  M+  G
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 221/469 (47%), Gaps = 19/469 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +VF+YN+++R    A   E+    F+EM +    P+  TY+T+I  + K    D A  
Sbjct: 200 SLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFK 259

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M  + +  +L+ Y+ +I    ++    +   + + +   G  PD V YNT++N + 
Sbjct: 260 LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC 319

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   F +A +L  EM   G+ PD V+Y++L+N   +      A+  F +M+      +  
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +I+ + Q     +A R++  M + G  P++V+YN LL  +  +    EAI L R M
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +  +VV+Y+T+I  + +  E ++A  +  EM  +G+ P+AITYS++I    +  +L
Sbjct: 440 EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRL 499

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           + A  LFQ++ +  +  D   Y ++I  Y + G +  A  L  E+ +    P+T+     
Sbjct: 500 NEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVL 559

Query: 372 ITILARAGRIEEATWVFRQAF-----DAGEVKDISVFGC----------MIELFSRNKKY 416
           I  L +  R  EA  +  + F       G   D  +  C          +I+ F      
Sbjct: 560 INGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLM 619

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               +VFE M      P+  +  ++++ + +      A  LY EM + G
Sbjct: 620 NEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 196/398 (49%), Gaps = 5/398 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWEL-AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P V +YN +L +++R ++  + A  ++ EM   G++ + ++Y+ LI  F   G  +  
Sbjct: 163 FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           + + ++ME++R   ++V Y+ +I    KL    +A  +   +   G+ P+L+ YN +IN 
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +    +E   ++ EM  +G  PD V+Y+TL+N Y +   F +AL + +EM     P D
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPD 342

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   +I+   +      A   F  M   G+ P+ V+Y +L+  + +     EA  ++ 
Sbjct: 343 VVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R      +VTYN ++  +  S   E+A  L++ M+ +G+ P+ ++YSTIIA + +  
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +LDRA  +  ++   GV  D + Y ++I        +  A  L  E+   + +P E   T
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            L     + G + EA  +  +    G + D   +  +I
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 212/451 (47%), Gaps = 20/451 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P+V  YN V+    + K+ + A  L   M   G+ P+  TY+ +I    + G  
Sbjct: 230 ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRI 289

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +     L +M++   + D V Y+ L+    K+ ++ +A+ + S +  +G+ PD+V Y ++
Sbjct: 290 EETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSL 349

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   KA     A    ++M  +G++P+ V+Y++L+N + +     EA  ++ EM     
Sbjct: 350 INTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF 409

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P  + T N +++ +      ++A  L   M   G+ P VVSY+T++  +   +    A  
Sbjct: 410 PPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQ 469

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M  K +  + +TY+++I+   +     +A +L QEM N+ + P+  TY+++I  + 
Sbjct: 470 MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYC 529

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           K G L+ A  L  ++   G   D V Y  +I    +      AKRLL +L      PN I
Sbjct: 530 KEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGI 589

Query: 367 PRETAI---------TILA------RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
             +T I         +++A        G + EA  VF       +  + +V+  +I    
Sbjct: 590 TYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHC 649

Query: 412 RNKKYANVIEVFEKMRSAGYFPDS-HIIALV 441
           R+       +++++M   G+ P +  IIALV
Sbjct: 650 RDGNVHKAHKLYKEMVDFGFIPHTVTIIALV 680



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 195/432 (45%), Gaps = 9/432 (2%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAK---LFKEARLLIEEMREQGVKPDTVSYS 163
           KA++I    K +G +P +++YN +++   + +   +F E   +  EM   GV  +  SY+
Sbjct: 150 KALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEK--VYREMIASGVSLNVFSYN 207

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            L+  +         L  F EM    C  ++ T N +I  Y +L    +A +L  SM   
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G++P++++YN ++          E   +   M RK    + VTYNT++  Y K     +A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L  EM   G+ P+ +TY+++I    KAG L+RA   F ++   G+  + V Y ++I  
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + + G +  A R+  E+ +    P  +     +     +GR+EEA  + R     G   D
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  +I  F R ++     ++  +M   G  PD+   + ++    + R    A DL+ 
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           EM  +  +  +  +  +++ Y    D N   +L + +     +     ++V+     +  
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQA 567

Query: 520 RLNDASRIMNRM 531
           R  +A R++ ++
Sbjct: 568 RTREAKRLLLKL 579



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 169/405 (41%), Gaps = 50/405 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--- 73
           P V  Y  ++  + +A     A   FD+M  RG+ P+  TY++LI  F ++G  D A   
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400

Query: 74  --------------------------------ISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                           I  L+ ME   +S D+V YS +I    +
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  +A  + + +   G+ PD + Y+++I    + +   EA  L +EM  + + PD  +
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++L+N Y +     EAL++  EM +     D  T N++I+   +    ++A RL   + 
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580

Query: 222 KMGIDPSVVSYNTLLRVYGEAE---------------LFGEAIHLFRLMQRKEIEQNVVT 266
                P+ ++Y+TL+    + E               L  EA  +F  M ++  + N   
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN +I  + +     KA  L +EM + G  P+ +T   ++      G  ++  ++ + + 
Sbjct: 641 YNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDIL 700

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            S    D  L + ++    + G +     LL E+ +   +P   A
Sbjct: 701 RSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 216/470 (45%), Gaps = 16/470 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +     ++R   R  + + A  + + + Q G  PD  TY+ LI+ + K G  D+A+  
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L +M    V+ D+V Y+ ++   R L D  K   A+ +  R       PD++ Y  +I  
Sbjct: 150 LDRMN---VAPDVVTYNTIL---RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 203

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K     +A  L++EMR +G KPD V+Y+ L+N   +  +  EA+     M    C  +
Sbjct: 204 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 263

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA++L   M + G  PSVV++N L+       L G AI +  
Sbjct: 264 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 323

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       N ++YN ++  + K  + ++A   +  M +RG  P+ +TY+T++    K G
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K+D A  +  +L S G     + Y T+I    +VG    A +LL E+R    +P+ I   
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + ++ L+R G+++EA   F      G   +   +  ++    ++++    I+    M S 
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV---FSDQVHFQM 476
              P      +++         + A DL +E+   G V    ++QV  +M
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 183/380 (48%), Gaps = 7/380 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I E++   P V  YNV++    ++ + + A  + D M    +APD  TY+T++      G
Sbjct: 117 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSG 173

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+  L +  Q     D++ Y+ LIE   K S   +A+ +   +++ G  PD+V YN
Sbjct: 174 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 233

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +IN   K     EA   +  M   G +P+ ++++ +L       ++++A  + ++M   
Sbjct: 234 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C   + T NI+I+   +  +   A  +   M   G  P+ +SYN LL  + + +    A
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 353

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           I    +M  +    ++VTYNT++    K  + + A  ++ ++ ++G  P  ITY+T+I  
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             K GK +RA  L  ++R  G++ D + Y +++    R G V  A +  H+L     +PN
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 473

Query: 365 TIPRETAITILARAGRIEEA 384
            I   + +  L ++ + + A
Sbjct: 474 AITYNSIMLGLCKSRQTDRA 493



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 188/440 (42%), Gaps = 42/440 (9%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G  +    +L+ M       D++  ++LI    ++    KA  +   L+ SG VPD++
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN +I+ + K+     A  +++ M    V PD V+Y+T+L    ++ K  +A+ V    
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +  C  D+ T  I+I+   +      A +L   MR  G  P VV+YN L+    +    
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEK-------------------- 282
            EAI     M     + NV+T+N +++     G+ ++ EK                    
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 283 ------------ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                       A +++++M   G  PN+++Y+ ++  + K  K+DRA      + S G 
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
             D V Y T++ A  + G V  A  +L++L      P  I   T I  L++ G+ E A  
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   DI  +  ++   SR  K    I+ F  +   G  P++     ++    
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 447 KLREFETADDLYSEMQEEGC 466
           K R+ + A D  + M  + C
Sbjct: 486 KSRQTDRAIDFLAYMISKRC 505



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ IL+ +      +P+  +YN +L    + K+ + A    D M  RG  PD  TY+TL
Sbjct: 317 RAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 375

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +T   K+G  D A+  L Q+     S  L+ Y+ +I+   K+    +AI +   ++  G+
Sbjct: 376 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 435

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ Y+++++   +     EA     ++   G++P+ ++Y++++    ++ +   A+ 
Sbjct: 436 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 495

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
             A M    C     T  I+I+      +AK+A  L   +   G+
Sbjct: 496 FLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540


>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 219/461 (47%), Gaps = 24/461 (5%)

Query: 5   ILDWINEEAR----------YSPSVFAYNVVLRNVLRA---KQWE---LAHGLFDEMRQR 48
           ILD++ +E R           SP+   ++ ++   ++    KQW+   L  G    + + 
Sbjct: 105 ILDFVQKEERSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWI--LYRS 162

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
              PD   Y+ LI  +G++ ++  A S   ++ + R       Y+ L++         KA
Sbjct: 163 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA 222

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            ++F+ ++  G  P  V YN  I+   K    ++A  + E M+    +P T +Y+ L+NL
Sbjct: 223 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 282

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +  K   AL VF EM    C  ++ T   +++ + +  + + A+ +F  +++ G++P 
Sbjct: 283 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 342

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V +YN L+  Y  A     A  +F LMQ    E +  +YN M+  YG++  HE A  + +
Sbjct: 343 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 402

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M+  GI P   ++  +++ + +AGK+ +   +  ++  SG++ D  +  +M+  Y R+G
Sbjct: 403 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 462

Query: 349 LVAHAKRLLHELRQPNTIPRETA-----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                + +L  + +    P + +     I I  RAG       +FR       + D+  +
Sbjct: 463 QFEKMEEVLTAMEK-GPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 521

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
              I  +SR K+Y   +EVFE+M  AG +PD     ++L++
Sbjct: 522 TSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 562



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D++ Y+ LI+   + S Y KA S +  L  +  VP    Y  ++  +  + L ++A  + 
Sbjct: 167 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 226

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
            EMR+ G  P  V Y+  ++  ++     +A+ +F  M    C     T  ++I++YG+ 
Sbjct: 227 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKA 286

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
             +  A ++F  MR     P++ ++  L+  +    L  +A  +F  +Q   +E +V  Y
Sbjct: 287 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 346

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +++ Y ++     A  +   MQ+ G EP+  +Y+ ++  +G+AG  + A  +F+ ++ 
Sbjct: 347 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 406

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+      +  ++ AY R G VA  + +++++ +    P+T    + + +  R G+ E+
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 466

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              V           DIS +  +I ++ R   +A + E+F  + +    PD       + 
Sbjct: 467 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIG 526

Query: 444 SYGKLREFETADDLYSEMQEEGC 466
           +Y + +++    +++ EM + GC
Sbjct: 527 AYSRRKQYNRCLEVFEEMIDAGC 549



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 177/408 (43%), Gaps = 43/408 (10%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKE--ARLLIEE--MREQGVKPDTVSYSTLLNLYVENHKF 175
           + P+   ++ +INV  + +L K+  A +LI    +      PD + Y+ L++ Y +   +
Sbjct: 125 LSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLY 184

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            +A S + E+ E  C     T  +++  Y    + + A+ +F  MRK G  PS V YN  
Sbjct: 185 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAY 244

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +     +A+ +F  M+R   + +  TY  +I +YGK+ +   A  +  EM+++  
Sbjct: 245 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 304

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           +PN  T++ ++  + + G  ++A  +F++L+ +G+E D   Y  ++ AY R G    A  
Sbjct: 305 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 364

Query: 356 LLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           +   ++     P   +  I+     RAG  E+A  VF      G    +     ++  +S
Sbjct: 365 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYS 424

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           R  K A   E+  +M  +G  PD+     VLNS                           
Sbjct: 425 RAGKVAKCEEIVNQMHKSGIKPDT----FVLNS--------------------------- 453

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
               ML+LYG    F  +E +   ++          ++++  IY RA 
Sbjct: 454 ----MLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG 497



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 8/347 (2%)

Query: 195 TTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           TT + +I+V  QL + K  D +     W + +    P V+ YN L+  YG+  L+ +A  
Sbjct: 130 TTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAES 189

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            +  +          TY  ++K Y  S   EKA  +  EM+  G  P+A+ Y+  I    
Sbjct: 190 TYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLM 249

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G   +A  +F++++    +     Y  +I  Y +      A ++ HE+R    +PN  
Sbjct: 250 KGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNIC 309

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +   AR G  E+A  +F Q  +AG   D+  +  ++E +SR        E+F  M
Sbjct: 310 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 369

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           +  G  PD     +++++YG+    E A  ++  M+  G   + + H  +LS Y      
Sbjct: 370 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              E +  ++          + + +  +Y R  +      ++  M K
Sbjct: 430 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEK 476



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 107/247 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P V+AYN ++    RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 335 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 394

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A +  + M++  ++  +  +  L+    +    +K   I +++  SGI PD    N+M
Sbjct: 395 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 454

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++G+   F++   ++  M +     D  +Y+ L+N+Y     F     +F  +   N 
Sbjct: 455 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 514

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T    I  Y +         +F  M   G  P   +   LL      +   E   
Sbjct: 515 IPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTT 574

Query: 251 LFRLMQR 257
           + R M +
Sbjct: 575 VIRTMHK 581


>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
 gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 184/362 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +LR  ++A   + A  +  EM + G++P+  TYS LI  +G  G ++SA   
Sbjct: 338 PRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIV 397

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME   V  +  ++S ++   R   ++ K+  +   +++SG+ PD V YN MI+ FGK
Sbjct: 398 LKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGK 457

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + M  +G++PDTV+++TL++ +    K   A  +F EM E       TT
Sbjct: 458 FNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTT 517

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI+ +G  +   D   L   MR  G+ P+ V+Y TL+ +YG++  F +AI     M+
Sbjct: 518 FNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMK 577

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   YN +I  Y +    E+A +  + M+  G++P+ +  +++I  +G+  +  
Sbjct: 578 AAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDA 637

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  + Q ++ + ++ D V Y T++ A  RV        +  E+      P   A  +L 
Sbjct: 638 EAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLR 697

Query: 377 RA 378
            A
Sbjct: 698 SA 699



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 204/458 (44%), Gaps = 10/458 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R + +   YN ++    R    E A  L   MRQ G   D   YS +I    ++   DSA
Sbjct: 193 RQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSA 252

Query: 74  I--SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           I     +++E D++  D+ L +++I    K  D SKA+     ++ SG+         +I
Sbjct: 253 ILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVI 312

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              G      EA  + EEMR+ G+KP T +Y+ LL  YV+     +A  V +EM      
Sbjct: 313 WALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVS 372

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T + +ID YG     + A  +   M    + P+   ++ +L  Y +   + ++  +
Sbjct: 373 PNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQV 432

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGK--SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            R M+   +  + V YN MI  +GK   L+H  AT     M + GIEP+ +T++T+I   
Sbjct: 433 LREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMAT--FDRMLSEGIEPDTVTWNTLIDCH 490

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            +AGK DRA  LF+++   G       +  MI ++         K LL  +R     PN+
Sbjct: 491 CRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNS 550

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I I  ++GR  +A         AG     +++  +I  +++       +  F  
Sbjct: 551 VTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRA 610

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           MR  G  P    +  ++N++G+ R    A  +   M+E
Sbjct: 611 MRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKE 648



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 185/408 (45%), Gaps = 39/408 (9%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  +F+EMR  G+ P    Y+ L+  + K G+   A   + +ME+               
Sbjct: 324 AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMER--------------- 368

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                               SG+ P+   Y+ +I+ +G A  ++ AR++++EM    V+P
Sbjct: 369 --------------------SGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQP 408

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +   +S +L+ Y +  ++ ++  V  EM       D    N+MID +G+ +    A   F
Sbjct: 409 NAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATF 468

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   GI+P  V++NTL+  +  A     A  LF  M          T+N MI  +G  
Sbjct: 469 DRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQ 528

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +   NL+  M+++G+ PN++TY+T+I I+GK+G+ + A      ++++G++    +Y
Sbjct: 529 ERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMY 588

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I AY + GL   A      +R    +P+ +   + I       R  EA  V +   +
Sbjct: 589 NALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKE 648

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
                D+  +  +++   R +K+  V  V+E+M  +G  PD    A++
Sbjct: 649 NDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAML 696



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 162/323 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP+   Y+ ++     A +WE A  +  EM    + P+ Y +S +++ +  +G +
Sbjct: 367 ERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEW 426

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             +   L++ME   V  D V Y+ +I+   K +    A++ F R+ S GI PD V +NT+
Sbjct: 427 QKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTL 486

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   +A     A  L EEM E G  P   +++ ++N + +  ++ +  ++ A M     
Sbjct: 487 IDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGL 546

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T   +ID+YG+     DA      M+  G+ PS   YN L+  Y +  L  +A+ 
Sbjct: 547 VPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVS 606

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR M+   ++ +++  N++I  +G+     +A  ++Q M+   ++P+ +TY+T++    
Sbjct: 607 AFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALI 666

Query: 311 KAGKLDRAAMLFQKLRSSGVEID 333
           +  K D+   +++++  SG   D
Sbjct: 667 RVEKFDKVPSVYEEMILSGCTPD 689



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 197/435 (45%), Gaps = 14/435 (3%)

Query: 63  CFGKEGMFDSAISWLQQMEQ--------DRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           CF  E ++   I  L Q E+         R +   + Y+ LI    + +D  KA+++ +R
Sbjct: 164 CFSYELLYSILIHALGQSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITR 223

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVEN 172
           ++  G   D V Y+ +I    +      A L  L  E+    ++ D    + ++  + + 
Sbjct: 224 MRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKA 283

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
               +AL     +      +   T   +I   G      +A+ +F  MR  G+ P   +Y
Sbjct: 284 GDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAY 343

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N LLR Y +A L  +A  +   M+R  +  N  TY+ +I  YG +   E A  +++EM+ 
Sbjct: 344 NALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEA 403

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
             ++PNA  +S I++ +   G+  ++  + +++ +SGV  D V Y  MI  + +   + H
Sbjct: 404 SNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDH 463

Query: 353 A----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A     R+L E  +P+T+   T I    RAG+ + A  +F +  + G     + F  MI 
Sbjct: 464 AMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMIN 523

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F   +++ +V  +   MRS G  P+S     +++ YGK   F  A +   +M+  G   
Sbjct: 524 SFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKP 583

Query: 469 SDQVHFQMLSLYGAR 483
           S  ++  +++ Y  R
Sbjct: 584 SSTMYNALINAYAQR 598



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 140/307 (45%), Gaps = 13/307 (4%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G++E   EA   F L QR+ +    +TYN +I    ++ + EKA NL+  M+
Sbjct: 171 YSILIHALGQSEKLYEA---FLLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMR 225

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G   + + YS II    +  ++D A +  L++++    +E+D  L   +IV + + G 
Sbjct: 226 QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGD 285

Query: 350 VAHAKRLLHELRQPNTIPRETAITI-----LARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           ++ A   L  + Q + +  +TA  +     L   GR  EA  +F +  D G       + 
Sbjct: 286 LSKALEFLGVV-QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYN 344

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++  + +     +   V  +M  +G  P+    + ++++YG    +E+A  +  EM+  
Sbjct: 345 ALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEAS 404

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
               +  V  ++LS Y  + ++     +   +++      +  ++V+   + + N L+ A
Sbjct: 405 NVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHA 464

Query: 525 SRIMNRM 531
               +RM
Sbjct: 465 MATFDRM 471


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 235/505 (46%), Gaps = 7/505 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN++++   R KQ++ A  L + M ++G +PD ++Y TLI    K G    A+ 
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK 205

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVF 134
              +M +  V+ D+  Y+ LI+   K  D   A  I+ RL K   + P++ +YN MIN  
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 265

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F E+  +   M++     D  +YSTL++    +     A  V+ EM E     D+
Sbjct: 266 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 325

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N M++ Y +    ++   L+  M K G   +VVSYN L+R   E     EAI ++ L
Sbjct: 326 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWEL 384

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  K+   + +TY  ++    K+    KA ++++E +N   + +   YS++I    + G+
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           LD  A +  ++   G + +P +   +I  + R   +  A R    +      P  +   T
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L++A R  EA  + ++    G   ++  +  ++    + KK    + ++ +    G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + PD  +  ++++      + E A  LYSEM++  CV +   H  ++  +   +DF    
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 491 SLFER-LDSDSNINKKELHHVVAGI 514
            +++  L S S+ N   + H   G 
Sbjct: 625 KIWDHILQSWSSSNCYYMEHTCQGC 649



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/578 (21%), Positives = 248/578 (42%), Gaps = 46/578 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +++I D +     YS + + ++ +L+ +   K       + + +R +          T+I
Sbjct: 26  ALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85

Query: 62  TCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             + K  M D A+   Q+M +       +  Y++L+    + + + +A S F   ++ G+
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 145

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+L  YN +I +  + K F +A+ L+  M EQG  PD  SY TL+N   +N    +AL 
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK 205

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQ----LDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +F EM E     D+   NI+ID + +    L+ ++  +RL   ++   + P++ SYN ++
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL---LKGPSVYPNIPSYNVMI 262

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +   F E+  ++  M++ E  Q++ TY+T+I     S   + AT + +EM   G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI------------------------ 332
           P+ + Y+T++  + +AG+++    L++ +   G                           
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 382

Query: 333 ----------DPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARA 378
                     D + Y  ++    + G +  A  +L E        +T    + I  L R 
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR++E   V  Q    G   +  V   +I  F R  K  + +  F  M S G FP     
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             ++N   K   F  A  L  EM  +G   +   +  +++     K  +M  +L+ +   
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
                  ++H+++      + ++ DA ++ + M +R+ 
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 6/282 (2%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   E     +V +YN+++R +    + + A  +++ + ++    D  TY  L+    K 
Sbjct: 348 WKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  + A+S L++ E  R   D   YS++I    +     +   +  ++   G  P+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN F +A   ++A      M  +G  P  V+Y+TL+N   +  +F EA ++  EM  
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527

Query: 188 VNCPLDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
                ++ T +++++   Q   LDMA +   L+    + G  P V  +N ++     +  
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALN---LWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
             +A+ L+  M++++   N+VT+NT+++ + K  + E+A+ +
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 55/104 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++  Y++++  + + K+ ++A  L+ +  ++G  PD   ++ +I      G  + A+
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
               +M+Q +   +LV ++ L+E   K+ D+ +A  I+  +  S
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 226/483 (46%), Gaps = 11/483 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+++ I      +P++  YN +L  + +  + E A  L  ++   G  PD  TY++LI
Sbjct: 5   AVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GKE     A    ++M    ++ D V Y+ LI    +     +A S++  + S G V
Sbjct: 64  DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V  +TMI+   KA     A  + + M  +G+ P+ V YS L++   +  K   AL +
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            A+M +  C  D  T N++ID   +    + A   F  M + G  P V +YN L+  + +
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243

Query: 242 AELFGEAIHLFRLMQRKEIEQNVV---TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           A     A H   L Q   I    +   TY  ++    K+ + E+A  LM+++   G  P 
Sbjct: 244 AGNTDAASH--SLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ ++    K G+L+ A  L +K+  +G   D V Y ++I    +      A +L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 359 ELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+       +T+     I  L + G+I +A+ V++     G V D+     MI+  S+  
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           +    + +F+ M + G  P+  + + +++   K R+ + A ++ ++M++  C   D + +
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT-PDTITY 480

Query: 475 QML 477
            +L
Sbjct: 481 NIL 483



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 206/485 (42%), Gaps = 40/485 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y  ++R +L+  +   A  ++  M   G  PD  T ST+I    K G   +A+   + M
Sbjct: 93  CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 152

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E   ++ + V+YS LI    K      A+ + +++K +   PD + YN +I+   K+   
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNI 199
           + AR   +EM E G KPD  +Y+ L++ + +      A    A+   +N C +D+ T   
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++D   +    ++A  L   +   G  P++ +YN LL    +     EAI L R +    
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +VVTY ++I   GK     +A  L +EM  RG+  + + Y+ +I    + GK+ +A+
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR-------------------LLHEL 360
            +++ + S G   D V   TMI    + G +  A R                   L+H L
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452

Query: 361 RQ--------------------PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            +                    P+TI     I  L ++G +E A   F +  +AG   D+
Sbjct: 453 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 512

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  +I  F +         VF+ M S+    +      +++   K R+   A   +  
Sbjct: 513 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQH 572

Query: 461 MQEEG 465
           M+E G
Sbjct: 573 MKERG 577



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 36/367 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A  +P    YNV++  + ++   E A   FDEM + G  PD YTY+ LI+ F K G  
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 71  DSA-----------------------ISWLQQ----------MEQDRVSG---DLVLYSN 94
           D+A                       + WL +          ME+   +G    +  Y+ 
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L+    K+    +AI +  ++  +G  PD+V Y ++I+  GK K   EA  L +EM  +G
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 367

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  DTV Y+ L+   ++  K  +A SV+  M    C  D+ T + MID   +      A 
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           R+F SM   G+ P+ V Y+ L+    +A     A+ +   M++     + +TYN +I   
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 487

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS + E A     EM   G +P+  TY+ +I+ + KAG  D A  +F  + SS    + 
Sbjct: 488 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANV 547

Query: 335 VLYQTMI 341
           V Y  +I
Sbjct: 548 VTYGALI 554



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 186/403 (46%), Gaps = 5/403 (1%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A++ ++++  +  +  +  Y+ L+    K+    +AI +  ++  +G  PD+V Y +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+  GK K   EA  L +EM  +G+  DTV Y+ L+   ++  K  +A SV+  M    
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ T + MID   +      A R+F SM   G+ P+ V Y+ L+    +A     A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +   M++     + +TYN +I    KS + E A     EM   G +P+  TY+ +I+ +
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 310 GKAGKLDRAA-MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            KAG  D A+  L Q+   +G  ID   Y  ++    +   +  A  L+ ++      P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                  +  L + GR+EEA  + R+  D G   D+  +  +I+   + K+     ++F+
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +M   G   D+     ++    +  +   A  +Y  M   GCV
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 404



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 140/307 (45%), Gaps = 15/307 (4%)

Query: 3   VAILDWIN-----EEA----------RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ 47
            AI+DW+      EEA            +P++  YN +L  + +  + E A  L  ++  
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
            G  PD  TY++LI   GKE     A    ++M    ++ D V Y+ LI    +     +
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A S++  + S G VPD+V  +TMI+   KA     A  + + M  +G+ P+ V YS L++
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +  K   AL + A+M +  C  D  T NI+ID   +    + A   F  M + G  P
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
            V +YN L+  + +A     A  +F  M       NVVTY  +I    K  +  KA+   
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYF 570

Query: 288 QEMQNRG 294
           Q M+ RG
Sbjct: 571 QHMKERG 577



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 153/344 (44%), Gaps = 41/344 (11%)

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           K  EA+++  ++    C   + T N +++   ++   ++A  L   +   G  P VV+Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +L+   G+ +   EA  LF+ M  + +  + V Y  +I+   ++ +  +A+++ + M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  P+ +T ST+I    KAG++  A  +F+ + + G+  + V+Y  +I    +   +  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI--------- 400
             +L ++++    P+TI     I  L ++G +E A   F +  +AG   D+         
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 401 ------------------SVFGCMIEL---------FSRNKKYANVIEVFEKMRSAGYFP 433
                             ++ GC I++          ++NKK    + + EK+ + G  P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
                  +LN   K+   E A DL  ++ + GC   D V +  L
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSL 343


>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 219/461 (47%), Gaps = 24/461 (5%)

Query: 5   ILDWINEEAR----------YSPSVFAYNVVLRNVLRA---KQWE---LAHGLFDEMRQR 48
           ILD++ +E R           SP+   ++ ++   ++    KQW+   L  G    + + 
Sbjct: 143 ILDFVQKEERSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWI--LYRS 200

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
              PD   Y+ LI  +G++ ++  A S   ++ + R       Y+ L++         KA
Sbjct: 201 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKA 260

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            ++F+ ++  G  P  V YN  I+   K    ++A  + E M+    +P T +Y+ L+NL
Sbjct: 261 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 320

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +  K   AL VF EM    C  ++ T   +++ + +  + + A+ +F  +++ G++P 
Sbjct: 321 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 380

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V +YN L+  Y  A     A  +F LMQ    E +  +YN M+  YG++  HE A  + +
Sbjct: 381 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 440

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M+  GI P   ++  +++ + +AGK+ +   +  ++  SG++ D  +  +M+  Y R+G
Sbjct: 441 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 500

Query: 349 LVAHAKRLLHELRQPNTIPRETA-----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                + +L  + +    P + +     I I  RAG       +FR       + D+  +
Sbjct: 501 QFEKMEEVLTAMEK-GPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 559

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
              I  +SR K+Y   +EVFE+M  AG +PD     ++L++
Sbjct: 560 TSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 600



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D++ Y+ LI+   + S Y KA S +  L  +  VP    Y  ++  +  + L ++A  + 
Sbjct: 205 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 264

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
            EMR+ G  P  V Y+  ++  ++     +A+ +F  M    C     T  ++I++YG+ 
Sbjct: 265 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKA 324

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
             +  A ++F  MR     P++ ++  L+  +    L  +A  +F  +Q   +E +V  Y
Sbjct: 325 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 384

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +++ Y ++     A  +   MQ+ G EP+  +Y+ ++  +G+AG  + A  +F+ ++ 
Sbjct: 385 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 444

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+      +  ++ AY R G VA  + +++++ +    P+T    + + +  R G+ E+
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 504

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              V           DIS +  +I ++ R   +A + E+F  + +    PD       + 
Sbjct: 505 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIG 564

Query: 444 SYGKLREFETADDLYSEMQEEGC 466
           +Y + +++    +++ EM + GC
Sbjct: 565 AYSRRKQYNRCLEVFEEMIDAGC 587



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 176/406 (43%), Gaps = 43/406 (10%)

Query: 122 PDLVAYNTMINVFGKAKLFKE--ARLLIEE--MREQGVKPDTVSYSTLLNLYVENHKFVE 177
           P+   ++ +INV  + +L K+  A +LI    +      PD + Y+ L++ Y +   + +
Sbjct: 165 PNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKK 224

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A S + E+ E  C     T  +++  Y    + + A+ +F  MRK G  PS V YN  + 
Sbjct: 225 AESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYID 284

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              +     +A+ +F  M+R   + +  TY  +I +YGK+ +   A  +  EM+++  +P
Sbjct: 285 GLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKP 344

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N  T++ ++  + + G  ++A  +F++L+ +G+E D   Y  ++ AY R G    A  + 
Sbjct: 345 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF 404

Query: 358 HELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
             ++     P   +  I+     RAG  E+A  VF      G    +     ++  +SR 
Sbjct: 405 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 464

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            K A   E+  +M  +G  PD+     VLNS                             
Sbjct: 465 GKVAKCEEIVNQMHKSGIKPDT----FVLNS----------------------------- 491

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
             ML+LYG    F  +E +   ++          ++++  IY RA 
Sbjct: 492 --MLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG 535



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 8/347 (2%)

Query: 195 TTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           TT + +I+V  QL + K  D +     W + +    P V+ YN L+  YG+  L+ +A  
Sbjct: 168 TTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAES 227

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            +  +          TY  ++K Y  S   EKA  +  EM+  G  P+A+ Y+  I    
Sbjct: 228 TYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLM 287

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G   +A  +F++++    +     Y  +I  Y +      A ++ HE+R    +PN  
Sbjct: 288 KGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNIC 347

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +   AR G  E+A  +F Q  +AG   D+  +  ++E +SR        E+F  M
Sbjct: 348 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 407

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           +  G  PD     +++++YG+    E A  ++  M+  G   + + H  +LS Y      
Sbjct: 408 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              E +  ++          + + +  +Y R  +      ++  M K
Sbjct: 468 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEK 514



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 107/247 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P V+AYN ++    RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 373 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 432

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A +  + M++  ++  +  +  L+    +    +K   I +++  SGI PD    N+M
Sbjct: 433 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 492

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++G+   F++   ++  M +     D  +Y+ L+N+Y     F     +F  +   N 
Sbjct: 493 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 552

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T    I  Y +         +F  M   G  P   +   LL      +   E   
Sbjct: 553 IPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTT 612

Query: 251 LFRLMQR 257
           + R M +
Sbjct: 613 VIRTMHK 619


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 219/491 (44%), Gaps = 39/491 (7%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +PS+  +  +L ++++ K +  A  L  +M  +GI PD  T S LI CF   G    +
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186

Query: 74  ISWLQQMEQ------------------------------DRVSG-----DLVLYSNLIEL 98
            S L ++ +                              D+V       + V Y  L+  
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             K+ +   AI +   ++     PD+V YNT+I+   K KL  EA     EM  +G+ PD
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            ++YSTL+  +    + + A S+  EM   N   D+ T  I+ID   +    K+A  L  
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M K G+ P+VV+Y+TL+  Y        A  +F  M + E+  +V +YN MI    K  
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGK 426

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A NL++EM ++ + PN +TY+++I    K+G++  A  L ++L   G   D + Y 
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486

Query: 339 TMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           +++    +   +  A  L  +++    QPN       I  L +  R++ A  +F+     
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+  +  MI    +       + +  KM   G  PD+    +++ S  +  E + A
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKA 606

Query: 455 DDLYSEMQEEG 465
           + L  EM  +G
Sbjct: 607 EKLLHEMIAKG 617



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 158/350 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  YN ++  + + K    A+  + EM  RGI PD  TYSTLI  F   G  
Sbjct: 264 EDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQL 323

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S L +M    ++ D+  Y+ LI+   K     +A ++   +   G+ P++V Y+T+
Sbjct: 324 MGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTL 383

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +        A+ +   M +  V P   SY+ ++N   +     EA+++  EM   N 
Sbjct: 384 MDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNV 443

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +ID   +      A  L   +   G    V++Y +LL    + +   +AI 
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+ + I+ N  TY  +I    K    + A  L Q +  +G   +  TY+ +I    
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G LD A  +  K+  +G   D V ++ +I +         A++LLHE+
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 188/434 (43%), Gaps = 39/434 (8%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S    M   R +  ++ +  ++    K+  +  AIS+  +++  GI PDLV  + +IN
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL----SVFA---EM 185
            F        +  ++ ++ + G +P+T+  +TL+       +  ++L     V A   +M
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 186 NEVN--------CPLDLTTC--------------------NIMIDVYGQLDMAKDADRLF 217
           N+V+        C +  T C                    N +ID   +  +  +A   +
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   GI P V++Y+TL+  +  A     A  L   M  K I  +V TY  +I    K 
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            + ++A NL+  M   G++PN +TYST++  +   G++  A  +F  +  + V      Y
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             MI    +   V  A  LL E+      PNT+   + I  L ++GRI  A  + ++   
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G+  D+  +  +++   +N+     I +F KM+  G  P+ +    +++   K    + 
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKN 535

Query: 454 ADDLYSEMQEEGCV 467
           A  L+  +  +GC 
Sbjct: 536 AQKLFQHILVKGCC 549



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 106/214 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +   +PSV +YN+++  + + K  + A  L  EM  + + P+  TY++LI    K G   
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA+  ++++       D++ Y++L++   K  +  KAI++F ++K  GI P+   Y  +I
Sbjct: 465 SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALI 524

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K    K A+ L + +  +G   D  +Y+ ++    +     EAL++ ++M +  C 
Sbjct: 525 DGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCI 584

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
            D  T  I+I    + D    A++L   M   G+
Sbjct: 585 PDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 52/111 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P+ + Y  ++  + +  + + A  LF  +  +G   D YTY+ +I    KEGM 
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           D A++   +ME +    D V +  +I    +  +  KA  +   + + G++
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 211/431 (48%), Gaps = 4/431 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   +  +L  +    +   A  LFDE+ + G AP   TY+T+I    K G   +A+  
Sbjct: 139 PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL 198

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+     D+V Y+ +I+   K    ++A+  FS +   GI P++V Y+++++ F  
Sbjct: 199 LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCN 258

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L ++M  + V P+TV+++ L++   +    +EA  VF  M E     D  T
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++D Y       +A +LF  M   G  PSV  YN L+  + ++    EA  L   M 
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +++  + VTY+T+++ + ++   + A  L +EM + G+ P++ITYS ++    K G LD
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + ++ S +E    +Y  +I      G +  A+ L   L     QP+ +     I
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           + L + G   EA  +FR+    G + +   +   I+ F RN   +N + + E+M   G+ 
Sbjct: 499 SGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS 558

Query: 433 PDSHIIALVLN 443
            DS    ++L+
Sbjct: 559 ADSSTFQMLLD 569



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 218/468 (46%), Gaps = 9/468 (1%)

Query: 17  PSVFAYNVVLRNVLRAK--QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P+V+   +++  +  +       A     +M + G+ P   T+ TL+     +     A+
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               ++ +   +  L+ Y+ +I+   K+   + A+ +  +++  G  PD+VAYNT+I+  
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   EA     EM +QG+ P+ V+YS++L+ +    +  EA S+F +M   N   + 
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNT 281

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I++D   +  M  +A R+F  M + G++P   +Y+ L+  Y       EA  LF +
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K    +V  YN +I  + KS    +A  L+ EM +R + P+ +TYST++  + +AG+
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  LF+++ S G+  D + Y  ++    + G +  A RLL  +++    P      I
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L +     G++E A  +F   F  G    +  +  MI    +        E+F KM   G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQML 477
             P+S    + +  + +  +   A  L  EM   G  FS D   FQML
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRG--FSADSSTFQML 567



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 171/350 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V AYN V+ ++ + ++   A   F EM  +GI P+  TYS+++  F   G  
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S  +QM    V  + V ++ L++   K     +A  +F  +  +G+ PD   Y+ +
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +       EA+ L + M  +G  P    Y+ L+N + ++ +  EA ++ +EM + + 
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T + ++  + Q    + A +LF  M   G+ P  ++Y+ LL    +     EA  
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + MQ  +IE ++  YN +I+      + E A  L   +  +GI+P+ +TY+ +I+   
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G  + A  +F+K+  +G   +   Y   I  + R G  ++A RL+ E+
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 193/457 (42%), Gaps = 39/457 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P V  +N +L ++++ K +     L  +M    I P+ YT + LI C          
Sbjct: 64  RPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINC---------- 113

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN- 132
              L    +D V                      A S   ++   G+ P  V + T++N 
Sbjct: 114 ---LCHSNRDHVH--------------------FAFSALGKMFKLGLQPTHVTFGTLLNG 150

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +  KAK+    +L  +E+ + G  P  ++Y+T++    +      AL +  +M E  C  
Sbjct: 151 LCSKAKIIDAVKLF-DEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKP 209

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+   N +ID   +   A +A   F  M   GI P+VV+Y+++L  +       EA  LF
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF 269

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  + +  N VT+  ++    K     +A  + + M   G+EP+A TYS ++  +   
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQ 329

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
            ++D A  LF  +   G      +Y  +I  + +   +  AK LL E+      P+T+  
Sbjct: 330 SQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTY 389

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T +    +AGR + A  +F++    G + D   +  +++   ++        + + M+ 
Sbjct: 390 STLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQE 449

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +   P   I  +++       + E A +L+S +  +G
Sbjct: 450 SKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 175/404 (43%), Gaps = 41/404 (10%)

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM----------- 150
           L   + A++ F++L     +P +V +N ++    K K +     L ++M           
Sbjct: 47  LHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYT 106

Query: 151 ------------REQ--------------GVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
                       R+               G++P  V++ TLLN      K ++A+ +F E
Sbjct: 107 LTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE 166

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           + ++     L T   +I    ++    +A +L   M + G  P VV+YNT++    +   
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRR 226

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA++ F  M  + I  NVVTY++++  +    +  +AT+L ++M  R + PN +T++ 
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++    K G +  A  +F+ +  +GVE D   Y  ++  Y     +  A++L   +    
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P      IL     ++ R+ EA  +  + +D     D   +  +++ F +  +     
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           ++F++M S G  PDS   +++L+   K    + A  L   MQE 
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES 450



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PSV  YN+++    ++++   A  L  EM  R + PD  TYSTL+  F + G    A 
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M    +  D + YS L++   K     +A  +   ++ S I P +  YN +I   
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 + AR L   +  +G++P  V+Y+ +++  ++     EA  +F +M    C  + 
Sbjct: 467 CNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS 526

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            T N+ I  + +     +A RL   M   G      ++  LL +    E+
Sbjct: 527 CTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEI 576



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/337 (19%), Positives = 139/337 (41%), Gaps = 6/337 (1%)

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y  L    DA   F  +  +   P VV +N LL    + + +   I L + M    I  N
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 264 VVTYNTMIKIYGKS-LEHEK-ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           V T   +I     S  +H   A + + +M   G++P  +T+ T++       K+  A  L
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F ++   G     + Y T+I    ++G   +A +LL ++ +    P+ +   T I  L +
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
             R  EA + F +  D G   ++  +  ++  F    +      +F++M      P++  
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             ++++   K      A  ++  M E G       +  ++  Y  +   +  + LF+ + 
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                    +++++   + ++ RLN+A  +++ M  R
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 35/158 (22%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E++  P +  YN++++ +    + E A  LF  +  +GI P   TY+ +I+   KEG+ 
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL- 506

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                                 SN            +A  +F ++  +G +P+   YN  
Sbjct: 507 ----------------------SN------------EACEMFRKMVVNGCLPNSCTYNVA 532

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           I  F +      A  LIEEM  +G   D+ ++  LL+L
Sbjct: 533 IQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 231/469 (49%), Gaps = 9/469 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ +V AY  V+  + +  +   A  +FDEM+Q+GI P++Y+Y++LI+ F K   F  A+
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              + M+      +   +   I    K  +  KAI  +  +KS GIVPD+VA N ++   
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K+     A+ +  E++  GV PDT++Y+ ++    +  KF EA+ +F +M E NC  D+
Sbjct: 576 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 635

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +ID   +     +A R+F+ +++M ++P+  +YNTLL   G      E +HL   
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 695

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N++TYNT++    K+     A +++  M  +G  P+  +Y+T+I    K  +
Sbjct: 696 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 755

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAI- 372
            + A  +F +++   +  D     T++ ++ ++GL+  A  ++ +   QP +    ++  
Sbjct: 756 YNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 814

Query: 373 ----TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                IL +AG IE++         +G   D      +I+   + KK     E+ +K +S
Sbjct: 815 SLMEGILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 873

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G    + +   ++         + A+ L++EM+E GC   D+  + +L
Sbjct: 874 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC-GPDEFTYNLL 921



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 224/471 (47%), Gaps = 4/471 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   + +EA    + + YN ++  ++++     A  ++  M   G+ P   TYS L
Sbjct: 267 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 326

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK    ++ +  L++ME   V  ++  Y+  I +  +   + +A  I +++++ G 
Sbjct: 327 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 386

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ +  +I V   A    +A+ +  +M++   KPD V+Y TLL+ + +N      + 
Sbjct: 387 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVME 446

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++     +ID   Q+    +A  +F  M++ GI P   SYN+L+  + 
Sbjct: 447 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFL 506

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A+ FG+A+ LF+ M     + N  T+   I  YGKS E  KA    + M+++GI P+ +
Sbjct: 507 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVV 566

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++    K+G+L  A  +F +L++ GV  D + Y  MI    +      A ++ +++
Sbjct: 567 AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 626

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            + N +P   A    I  L +AGR +EA  +F Q  +         +  ++    R  K 
Sbjct: 627 IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 686

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M  + Y P+      +L+   K      A D+   M  +GC+
Sbjct: 687 KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 737



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 198/461 (42%), Gaps = 41/461 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +FD M+++ +  +  T++ +    G EG   SA   L  M++  +  +   Y+ L+    
Sbjct: 237 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 296

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K     +A+ ++  +   G+VP +  Y+ ++  FGK +  +    L+ EM   GVKP+  
Sbjct: 297 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 356

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SY+  + +  +  +F EA  + A+M    C  D+ T  ++I V        DA  +FW M
Sbjct: 357 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416

Query: 221 RKMGIDPSVVSYNTLLRVYGE------------------------------------AEL 244
           +K    P  V+Y TLL  +G+                                      +
Sbjct: 417 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 476

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F EA+ +F  M++K I     +YN++I  + K+     A  L + M   G +PN  T+  
Sbjct: 477 F-EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 535

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
            I  +GK+G+  +A   ++ ++S G+  D V    ++    + G +  AKR+ HEL+   
Sbjct: 536 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 595

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+TI     I   ++A + +EA  +F    +   V D+     +I+   +  +     
Sbjct: 596 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAW 655

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +F +++     P       +L   G+  + +    L  EM
Sbjct: 656 RIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 696



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 216/497 (43%), Gaps = 45/497 (9%)

Query: 11   EEARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
            +E    P+   YN +L  + R  K  E+ H L +EM      P+  TY+T++ C  K G 
Sbjct: 662  KEMNLEPTDGTYNTLLAGLGREGKVKEVMH-LLEEMYHSNYPPNLITYNTILDCLCKNGA 720

Query: 70   FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             + A+  L  M       DL  Y+ +I    K   Y++A SIF ++K   ++PD     T
Sbjct: 721  VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCT 779

Query: 130  MINVFGKAKLFKEARLLIEE-MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++  F K  L KEA  +I++   + G K D  S  +L+   ++     +++  FAE+   
Sbjct: 780  ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE-FAEIIAS 838

Query: 189  N---------CPLDLTTC--------------------NIMIDVYGQL-------DMAKD 212
            +         CPL    C                    ++   +Y  L       ++   
Sbjct: 839  SGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDI 898

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A+ LF  M+++G  P   +YN LL   G++    E + +   M RK  E   VTYNT+I 
Sbjct: 899  AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 958

Query: 273  IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
               KS   E+A +L   + ++G  P   TY  ++    KAG+++ A  LF ++   G + 
Sbjct: 959  GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 1018

Query: 333  DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVF 388
            +  +Y  ++  +   G       L  ++      P   + TI    L +AG++ +    F
Sbjct: 1019 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1078

Query: 389  RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            RQ  + G   D+  +  +I+   ++K+    + +F +M+  G  P+ +    ++   GK 
Sbjct: 1079 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1138

Query: 449  REFETADDLYSEMQEEG 465
             +   A  +Y E+  +G
Sbjct: 1139 GKAAEAGKMYEELLTKG 1155



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 3/347 (0%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            YN ++  ++     ++A GLF EM++ G  PD +TY+ L+   GK    +  +   ++M 
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 82   QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            +       V Y+ +I    K     +AI ++  L S G  P    Y  +++   KA   +
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 142  EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            +A  L  EM E G K +   Y+ LLN +       +   +F +M +     D+ +  I+I
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1062

Query: 202  DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
            D   +     D    F  + +MG++P +++YN L+   G+++   EA+ LF  MQ+K I 
Sbjct: 1063 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122

Query: 262  QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             N+ TYN++I   GK+ +  +A  + +E+  +G +PN  TY+ +I  +  +G  D A   
Sbjct: 1123 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAA 1182

Query: 322  FQKLRSSGVEIDPVLYQTMIVAYERVGLVAH---AKRLLHELRQPNT 365
            + ++   G   +     +   + E VG V     + R  H  ++P T
Sbjct: 1183 YGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHRSYHNAKEPTT 1229



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 228/522 (43%), Gaps = 45/522 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  + V+++ +  A +   A  +F +M++    PDR TY TL+  FG  G   S +  
Sbjct: 388 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 447

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+ D  + ++V Y+ +I+   ++    +A+ +F  +K  GIVP+  +YN++I+ F K
Sbjct: 448 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 507

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F +A  L + M   G KP+  ++   +N Y ++ + ++A+  +  M       D+  
Sbjct: 508 ADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVA 567

Query: 197 CNIMI---DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N ++      G+L MAK   R+F  ++ MG+ P  ++Y  +++   +A  F EA+ +F 
Sbjct: 568 GNAVLFGLAKSGRLGMAK---RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 624

Query: 254 LM---------------------------------QRKE--IEQNVVTYNTMIKIYGKSL 278
            M                                 Q KE  +E    TYNT++   G+  
Sbjct: 625 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 684

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++  +L++EM +    PN ITY+TI+    K G ++ A  +   + + G   D   Y 
Sbjct: 685 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYN 744

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAF-DA 394
           T+I    +      A  +  ++++   P+     T +    + G ++EA  + +  F   
Sbjct: 745 TVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQP 804

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D S    ++E   +       IE  E + S+G   D   +  ++    K ++   A
Sbjct: 805 GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA 864

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            +L  + +  G      ++  ++         ++ E LF  +
Sbjct: 865 HELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 906



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 196/458 (42%), Gaps = 41/458 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P + +YN V+  +++ +++  A  +F +M++  + PD  T  T++  F K G+   A+  
Sbjct: 738  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 796

Query: 77   LQQM------EQDRVS--------------------GDLVLYSN-------LIELARKLS 103
            ++        + DR S                     +++  S        L  L + L 
Sbjct: 797  IKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLC 856

Query: 104  DYSKAIS---IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               KA+    +  + KS G+      YN++I       L   A  L  EM+E G  PD  
Sbjct: 857  KQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF 916

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y+ LL+   ++ +  E L V  EM+         T N +I    +    + A  L++++
Sbjct: 917  TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 976

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               G  P+  +Y  LL    +A    +A +LF  M     + N   YN ++  +  +   
Sbjct: 977  MSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 1036

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            EK  +L Q+M ++GI P+  +Y+ II    KAG+L+     F++L   G+E D + Y  +
Sbjct: 1037 EKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLL 1096

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGE 396
            I    +   +  A  L +E+++   +P      + I  L +AG+  EA  ++ +    G 
Sbjct: 1097 IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1156

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              ++  +  +I  +S +    +    + +M   G  P+
Sbjct: 1157 KPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/475 (20%), Positives = 213/475 (44%), Gaps = 20/475 (4%)

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + RV+      + ++EL R          +F  ++   +  ++  +  +    G     +
Sbjct: 208 KPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 267

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A + +  M+E G+  +  +Y+ L+   V++    EAL V+  M        + T ++++
Sbjct: 268 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 327

Query: 202 DVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +G+    +D + + W +R+M   G+ P+V SY   +RV G+A+ F EA  +   M+ +
Sbjct: 328 VAFGK---RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 384

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
             + +V+T+  +I++   +     A ++  +M+    +P+ +TY T++  +G  G     
Sbjct: 385 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSV 444

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITI 374
             ++  +++ G   + V Y  +I A  +VG V  A  +  E++Q   +P +    + I+ 
Sbjct: 445 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 504

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +A R  +A  +F+     G   +       I  + ++ +    I+ +E M+S G  PD
Sbjct: 505 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 564

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESL 492
                 VL    K      A  ++ E++  G V  D + + M+      A K    ++  
Sbjct: 565 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIF 623

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI------MNRMNKRRTFNSSL 541
           ++ ++++   +   ++ ++  +Y +A R ++A RI      MN      T+N+ L
Sbjct: 624 YDMIENNCVPDVLAVNSLIDTLY-KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 677



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 111/225 (49%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y  +   YN ++  ++++++ E A  L+  +  +G +P   TY  L+    K G  + A 
Sbjct: 946  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 1005

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +   +M +     +  +Y+ L+   R   +  K   +F  +   GI PD+ +Y  +I+  
Sbjct: 1006 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1065

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             KA    +      ++ E G++PD ++Y+ L++   ++ +  EA+S+F EM +     +L
Sbjct: 1066 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             T N +I   G+   A +A +++  +   G  P+V +YN L+R Y
Sbjct: 1126 YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1170



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 150/331 (45%), Gaps = 12/331 (3%)

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           A+  +R   + RK  +  +  S N +L +       G+   +F +MQR+ ++ NV T+  
Sbjct: 196 AEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAA 255

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-LFQKLRSS 328
           +    G       A   +  M+  GI  NA TY+ ++    K+G  DR A+ +++ +   
Sbjct: 256 IFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDREALEVYRVMMVD 314

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV      Y  ++VA+ +   V     LL E+     +PN       I +L +A R +EA
Sbjct: 315 GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEA 374

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +  +  + G   D+     +I++     + ++  +VF KM+ +   PD      +L+ 
Sbjct: 375 YRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDK 434

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV---HFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +G   + ++  ++++ M+ +G  ++D V      + +L    + F  LE +F+ +     
Sbjct: 435 FGDNGDSQSVMEIWNAMKADG--YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGI 491

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMN 532
           + ++  ++ +   + +A+R  DA  +   M+
Sbjct: 492 VPEQYSYNSLISGFLKADRFGDALELFKHMD 522


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 239/520 (45%), Gaps = 34/520 (6%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P  + YN+++   L++     A  L  EM+ R + P  +TYS LI+          
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L QM ++ V  ++ +Y  LI+   + S Y  AI +   + ++G++PDL  YN +I 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +AK  +EA++L+ +M E+G+KP+  +Y   +NLY ++ +   A   F +M       
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +     I+I  +  +    +A   F  M + G+ P + +Y+ ++    +     EA+ +F
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG-- 310
               +  +  +V  YN++I  + K  + EKA+ L  EM + GI PN + Y+T+I  +G  
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K+G L  A  LF ++ S G+  D  +Y  +I    + G +  A  L HE +Q +      
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS------ 763

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                                     V  +S F  +I+ F ++ K     E+F+ M    
Sbjct: 764 --------------------------VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P+     +++++YGK    E A+ L+ +M+    + +   +  +L  Y    +   + 
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
           SLF+ +++         + V+A  Y +  +  +A +++N+
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 231/487 (47%), Gaps = 8/487 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN  +  + +    + A  +   M ++G+ PD +TY+ L+  F K+    
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M    ++ +   Y+ LI+   K  +  +A+ I   + + G+  ++V YN MI
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               KA    +A  L  EM   G++PDT +Y+ L++ Y+++H   +A  + AEM      
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T +++I         + A+ +   M + G+ P+V  Y TL++ Y +   +  AI L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            ++M    +  ++  YN +I    ++ + E+A  L+ +M  +GI+PNA TY   I ++ K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +G++  A   F+ + SSG+  + V+Y  +I  +  VG    A      + +   IP   A
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L++ G+ +EA  VF +    G V D+ ++  +I  F +        +++++M 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 428 SAGYFPDSHIIALVLNSYG--KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
             G  P+  +   ++N YG  K      A  L+ EM  +G   S   +   + + G  K+
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG--ISPDGYIYCILIDGCGKE 746

Query: 486 FNMLESL 492
            N+ ++L
Sbjct: 747 GNLEKAL 753



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 233/544 (42%), Gaps = 51/544 (9%)

Query: 5   ILDWINEEAR---------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRY 55
           +L ++NE +          + P++   N ++R++L+A    L   ++  M +  I PD Y
Sbjct: 184 VLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVY 243

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TY+ +I    K G        L +ME++    +L  Y+  I    +     +A+ +   +
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
              G+ PD   Y  +++ F K K  KEA+L+ E M   G+ P+  +Y+ L++ +++    
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EAL +  EM      L++ T N MI    +      A  LF  M   GI+P   +YN L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLL 422

Query: 236 LRVYGEAELFGEAIHLFRLMQ-----------------------------------RKEI 260
           +  Y ++    +A  L   M+                                   R  +
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + NV  Y T+IK Y +   +E A  L++ M   G+ P+   Y+ +I    +A K++ A M
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-- 378
           L   +   G++ +   Y   I  Y + G +  A+R   ++     +P     TIL +   
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602

Query: 379 --GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             G   EA   F+   + G + DI  +  +I   S+N K    + VF K    G  PD  
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFE 494
           +   +++ + K  + E A  LY EM   G   +  V+  +++ YG  K  N+ E+  LF+
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722

Query: 495 RLDS 498
            + S
Sbjct: 723 EMIS 726



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 185/369 (50%), Gaps = 9/369 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + AY+ ++ ++ +  + + A G+F +  + G+ PD + Y++LI+ F KEG  + A   
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 77  LQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +M  + ++ ++V+Y+ LI      K  + ++A  +F  + S GI PD   Y  +I+  
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK    ++A  L  E +++ V   + ++++L++ + ++ K +EA  +F +M +     ++
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 802

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I+ID YG+ +M ++A++LF  M    I P+ ++Y +LL  Y +     + I LF+ 
Sbjct: 803 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 862

Query: 255 MQRKEIEQNVVTYNTMIKIY---GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           M+ + I  + + Y  M   Y   GKSLE   A  L+ +    GI+     +  +I    K
Sbjct: 863 MEARGIACDAIAYGVMASAYCKEGKSLE---ALKLLNKSLVEGIKLEDDVFDALIFHLCK 919

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             ++     L  ++    + +      T+++ + + G    A ++L  +++   +P   +
Sbjct: 920 EKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 979

Query: 372 ITILARAGR 380
           +T     GR
Sbjct: 980 LTDSISTGR 988



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 201/465 (43%), Gaps = 22/465 (4%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRV-----------------SGDLVLYSNLIE 97
           ++YS L       G+   A + L+++ Q R                    +L ++   I+
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
             R L   ++A S+F    S G  P L+  N ++    KA +      +   M E  + P
Sbjct: 181 KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D  +Y+ ++  + +    ++   V +EM E  C  +L T N  I    Q     +A  + 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M + G+ P   +Y  L+  + + +   EA  +F  M    +  N  TY  +I  + K 
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              E+A  +  EM  RG++ N +TY+ +I    KAG++ +A  LF ++  +G+E D   Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  Y +   +A A  LL E++     P+       I+ L  +  +++A  V  Q   
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   ++ ++G +I+ + +  +Y   IE+ + M + G  PD      ++    + ++ E 
Sbjct: 480 NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 539

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           A  L  +M E+G   +   +   ++LY    +  + E  F+ + S
Sbjct: 540 AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 35/220 (15%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + + +P++  Y +++    +A+  E A  LF +M  R I P+  TY++L+  + + G   
Sbjct: 795 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 854

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             IS  + ME                                   + GI  D +AY  M 
Sbjct: 855 KMISLFKDME-----------------------------------ARGIACDAIAYGVMA 879

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + K     EA  L+ +   +G+K +   +  L+    +  +    L + +EM +    
Sbjct: 880 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 939

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           L   TCN ++  + +     +A ++   M+++G  P+ +S
Sbjct: 940 LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 979


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 223/459 (48%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+V   N+++  + ++++ + A  +F++M  +   PD  T+ +LI   GK G  
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++M       + ++Y++LI+             I+  + +    PDL   NT 
Sbjct: 464 DDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTY 523

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R + EE++ +   PD  SYS L++  ++     E   +F  M E  C
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    NI+ID + +      A +L   M+  G +P+VV+Y +++    + +   EA  
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   + K IE NVV Y+++I  +GK    ++A  +++E+  +G+ PN  T+++++    
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALV 703

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           KA +++ A + FQ ++      + V Y  +I    +V     A     E+++    P+TI
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I+ LA+AG I EA  +F +    G V D + +  MIE  S   +  +   +FE+ 
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           R  G    +    ++L++  K    E A  + + ++E G
Sbjct: 824 RRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 11/461 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y P+V  +  ++R   +  + + A  L DEM+   +  D   Y+  I  FGK G  
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  ++E + +  D V Y+++I +  K +   +A+ +F  L+ +  VP   AYNTM
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  R +G  P  ++Y+ +L    +  K  EAL VF EM +   
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA 374

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           P +L+T NI+ID+    G+LD A +   L  SM+K G+ P+V + N ++    +++   E
Sbjct: 375 P-NLSTYNILIDMLCRAGKLDCAFE---LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  M  K    + +T+ ++I   GK    + A  + ++M +     N+I Y+++I 
Sbjct: 431 ACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIK 490

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +   G+ +    +++ + +     D  L  T +    + G     + +  E++    +P
Sbjct: 491 NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVP 550

Query: 368 RETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
              + +I    L +AG   E   +F    + G V D   +  +I+ F +  K     ++ 
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           E+M++ G+ P       V++   K+   + A  L+ E + +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 209/456 (45%), Gaps = 5/456 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY  ++         ++   LF +M++ G  P  + ++TLI  F KEG  DSA
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +S L +M+   +  D+VLY+  I+   K+     A   F  ++++G+ PD V Y +MI V
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  + E + +    P T +Y+T++  Y    KF EA S+            
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N ++    ++    +A R+F  M+K    P++ +YN L+ +   A     A  L  
Sbjct: 343 VIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDCAFELRD 401

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQ+  +  NV T N M+    KS + ++A  + ++M  +   P+ IT+ ++I   GK G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVG 461

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
           ++D A  +++K+  S    + ++Y ++I  +   G      ++  ++   N  P      
Sbjct: 462 RVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLN 521

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  + +AG  E+   +F +      V D   +  +I    +        E+F  M+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D+    +V++ + K  +   A  L  EM+ +G
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 239/565 (42%), Gaps = 79/565 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  P  +AYN ++     A +++ A+ L +  R +G  P    Y+ ++TC  K G  
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++D  + +L  Y+ LI++  +      A  +   ++ +G+ P++   N M
Sbjct: 360 DEALRVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIM 418

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN----------------------- 167
           ++   K++   EA  + E+M  +   PD +++ +L++                       
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478

Query: 168 -----LYVE------NHKFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
                +Y        NH   E    ++ +M   NC  DL   N  +D   +    +    
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           +F  ++     P   SY+ L+    +A    E   LF  M+ +    +   YN +I  + 
Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  +  KA  L++EM+ +G EP  +TY ++I    K  +LD A MLF++ +S  +E++ V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
           +Y ++I  + +VG +  A  +L EL Q    PN     + +  L +A  I EA       
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEA------- 711

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
                                       +  F+ M+     P+     +++N   K+R+F
Sbjct: 712 ----------------------------LVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHH 509
             A   + EMQ++G   S   +  M+S  G  K  N+ E  +LF+R  ++  +     ++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMIS--GLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
            +       NR  DA  +     +R
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRR 826



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/555 (21%), Positives = 240/555 (43%), Gaps = 56/555 (10%)

Query: 1   RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R+   LD I  E   A + PSV     ++ + ++A +      +   MR+    P    Y
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAY 171

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           +TLI  F      D  ++  QQM++      + L++ LI    K      A+S+   +KS
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           S +  D+V YN  I+ FGK      A     E+   G+KPD V+Y++++ +  + ++  E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A+ +F  + E N                               R++   P   +YNT++ 
Sbjct: 292 AVEMFEHL-EKN-------------------------------RRV---PCTYAYNTMIM 316

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            YG A  F EA  L    + K    +V+ YN ++    K  + ++A  + +EM+ +   P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAP 375

Query: 298 NAITYSTIIAIWGKAGKLDRA---------AMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           N  TY+ +I +  +AGKLD A         A LF  +R+  + +D +     +       
Sbjct: 376 NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE----- 430

Query: 349 LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             A  +++ +++  P+ I   + I  L + GR+++A  ++ +  D+    +  V+  +I+
Sbjct: 431 ACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIK 490

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F  + +  +  ++++ M +    PD  ++   ++   K  E E    ++ E++    V 
Sbjct: 491 NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFV- 549

Query: 469 SDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
            D   + +L     +  F N    LF  +     +     +++V   + +  ++N A ++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609

Query: 528 MNRMNKRRTFNSSLV 542
           +  M K + F  ++V
Sbjct: 610 LEEM-KTKGFEPTVV 623



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 37/358 (10%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI----- 61
           D +N+    SP +   N  +  + +A + E    +F+E++ R   PD  +YS LI     
Sbjct: 507 DMVNQNC--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIK 564

Query: 62  -----------------TC-------------FGKEGMFDSAISWLQQMEQDRVSGDLVL 91
                             C             F K G  + A   L++M+       +V 
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y ++I+   K+    +A  +F   KS  I  ++V Y+++I+ FGK     EA L++EE+ 
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++G+ P+  ++++LL+  V+  +  EAL  F  M E+ C  +  T  I+I+   ++    
Sbjct: 685 QKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A   +  M+K G+ PS +SY T++    +A    EA  LF   +      +   YN MI
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +          A +L +E + RG+  +  T   ++    K   L++AA++   LR +G
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/434 (21%), Positives = 190/434 (43%), Gaps = 19/434 (4%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL---ARKLSDYSKAISIF 112
           +Y++L+    +   FD+    L +M    V+G     +  IE+     K +   +   + 
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMS---VAGFGPSVNTCIEMVLSCVKANKLREGFDVV 156

Query: 113 SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
             ++     P   AY T+I  F           L ++M+E G +P    ++TL+  + + 
Sbjct: 157 QNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
            +   ALS+  EM   +   D+   N+ ID +G++     A + F  +   G+ P  V+Y
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            +++ V  +A    EA+ +F  +++         YNTMI  YG + + ++A +L++  + 
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLV 350
           +G  P+ I Y+ I+    K GK+D A  +F++++       P L  Y  +I    R G +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA---PNLSTYNILIDMLCRAGKL 393

Query: 351 AHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  L   +++    P    + I    L ++ +++EA  +F Q        D   F  +
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I+   +  +  +  +++EKM  +    +S +   ++ ++      E    +Y +M  + C
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 467 VFSDQVHFQMLSLY 480
                   Q+L+ Y
Sbjct: 514 ----SPDLQLLNTY 523



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 43/306 (14%)

Query: 203 VYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLL-------------RVYGEAELF 245
           V G L   KD +R      W  R+  +     SYN+LL             ++ GE  + 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127

Query: 246 G----------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G                      E   + + M++ +       Y T+I  +      +  
Sbjct: 128 GFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L Q+MQ  G EP    ++T+I  + K G++D A  L  +++SS ++ D VLY   I +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247

Query: 344 YERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + +VG V  A +  HE+     +P+ +   + I +L +A R++EA  +F        V  
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              +  MI  +    K+     + E+ R+ G  P       +L    K+ + + A  ++ 
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFE 367

Query: 460 EMQEEG 465
           EM+++ 
Sbjct: 368 EMKKDA 373


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 199/425 (46%), Gaps = 15/425 (3%)

Query: 17  PSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P + A   ++R + +  K W+ A  + + +   G  PD  TY+ LI+ + K G   SA+ 
Sbjct: 143 PDIIACTSLIRGLCKTGKTWK-ATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQ 201

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMIN 132
            L +M    VS D+V Y+ ++   R L D  K   A+ +  R       PD++ Y  +I 
Sbjct: 202 LLDRMS---VSPDVVTYNTIL---RTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 255

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K     +A  L++EMR++G KPD V+Y+ L+N   +  +  EA+     M    C  
Sbjct: 256 ATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T NI++          DA++    M + G  PSVV++N L+       L G AI + 
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVL 375

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M +     N ++YN ++    K  + E+A   +  M +RG  P+ +TY+T++    K 
Sbjct: 376 EKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 435

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           GK+D A  +  +L S G     + Y T+I    +VG    A +LL E++    +P+ I  
Sbjct: 436 GKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITY 495

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T +  L+R G+++EA   F    + G   +   +  ++    + ++    I+    M +
Sbjct: 496 STLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA 555

Query: 429 AGYFP 433
            G  P
Sbjct: 556 RGCKP 560



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 174/374 (46%), Gaps = 7/374 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I E++   P V  YNV++    +  +   A  L D M    ++PD  TY+T++      G
Sbjct: 170 ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSG 226

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+  L +  Q     D++ Y+ LIE   K S   +A+ +   ++  G  PD+V YN
Sbjct: 227 KLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +IN   K     EA   +  M   G +P+ ++++ +L       ++++A    AEM   
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C   + T NI+I+   +  +   A  +   M + G  P+ +SYN LL    + +    A
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           I    +M  +    ++VTYNT++    K  + + A  ++ ++ ++G  P  ITY+T+I  
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             K GK D A  L  +++  G++ D + Y T++    R G V  A    H+L +    PN
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526

Query: 365 TIPRETAITILARA 378
            I   + +  L +A
Sbjct: 527 AITYNSIMLGLCKA 540



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++    +      A  L DEMR +G  PD  TY+ LI    KEG  D AI +
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M       +++ ++ ++        +  A    + +   G  P +V +N +IN   +
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L   A  ++E+M + G  P+++SY+ LL+   ++ K   A+     M    C  D+ T
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N ++      G++D+A +   +   +   G  P +++YNT++    +     +AI L  
Sbjct: 425 YNTLLTALCKDGKVDVAVE---ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+ K ++ +++TY+T++    +  + ++A     +++  G++PNAITY++I+    KA 
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +  RA      + + G +     Y  +I  +AYE  GL   A  LL+EL     + + +A
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYE--GLAKEALELLNELCSRGVVKKSSA 599

Query: 372 ITILAR 377
             ++ +
Sbjct: 600 EQVVVK 605



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 192/433 (44%), Gaps = 10/433 (2%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G  +    +L+ M       D++  ++LI    K     KA  +   L+ SG VPD++
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN +I+ + K      A  L++ M    V PD V+Y+T+L    ++ K  EA+ V    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +  C  D+ T  I+I+   +      A +L   MR  G  P VV+YN L+    +    
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EAI     M     + NV+T+N +++    +     A   + EM  +G  P+ +T++ +
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           I    + G + RA  + +K+   G   + + Y  ++ A  +   +  A   L  +     
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P+ +   T +T L + G+++ A  +  Q    G    +  +  +I+  S+  K  + I+
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ--MLSL 479
           + ++M+  G  PD    + ++    +  + + A   + +++E G V  + + +   ML L
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG-VKPNAITYNSIMLGL 537

Query: 480 YGARKDFNMLESL 492
             AR+    ++ L
Sbjct: 538 CKARQTVRAIDFL 550



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 1/225 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +L+ + +    +P+  +YN +L  + + K+ E A    D M  RG  PD  TY+TL
Sbjct: 370 RAIDVLEKMPQHG-CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTL 428

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +T   K+G  D A+  L Q+     S  L+ Y+ +I+   K+     AI +   +K  G+
Sbjct: 429 LTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGL 488

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD++ Y+T++    +     EA     ++ E GVKP+ ++Y++++    +  + V A+ 
Sbjct: 489 KPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAID 548

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
             A M    C    T+  I+I+      +AK+A  L   +   G+
Sbjct: 549 FLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ +N+V+       Q  LA  +  +M + G  PDR T  +L+  F +      A+S + 
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +     D+V Y+ +I+   K    + A+  F  +   GI P++V Y  ++N    + 
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + +A  L+ +M ++ + P+ ++YS LL+ +V+N K +EA  +F EM  ++   D+ T +
Sbjct: 240 RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYS 299

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+     D   +A+++F  M   G  P VVSYNTL+  + +A+   + + LFR M ++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR 359

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I+ + +  + +KA     +M + G+ P+  TY+ ++      G L++A
Sbjct: 360 GLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKA 419

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
            ++F+ ++ S +++D V Y T+I    + G V  A  L   L     +P+ +   T ++ 
Sbjct: 420 LVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSG 479

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           L   G   E   ++ +    G +K+ S+  C+      +       E+ +KM S GY P
Sbjct: 480 LCTKGLQHEVEALYTKMKQEGLMKNDSML-CL-----GDGDITISAELIKKMLSCGYAP 532



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 164/319 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P + AYN ++ ++ + ++   A   F E+ ++GI P+  TY+ L+      G ++
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L+ M + +++ +++ YS L++   K     +A  IF  +    I PD+V Y+++I
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA  + + M  +G  PD VSY+TL+N + +  +  + + +F +M++    
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + Q+     A   F  M   G+ P + +YN LL    +  L  +A+ +
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  MQ+ E++ ++VTY T+I+   K+ + E A  L   +  +G++P+ +TY+T+++    
Sbjct: 423 FEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 312 AGKLDRAAMLFQKLRSSGV 330
            G       L+ K++  G+
Sbjct: 483 KGLQHEVEALYTKMKQEGL 501



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 185/397 (46%), Gaps = 4/397 (1%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI+  ++M + R    +V ++ L+    K+  Y   IS+  +++  GI  DL  +N +IN
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F        A  ++ +M + G +PD V+  +L+N +   ++  +A+S+  +M E+    
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+   N +ID   +     DA   F  + + GI P+VV+Y  L+     +  + +A  L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M +++I  NV+TY+ ++  + K+ +  +A  + +EM    I+P+ +TYS++I      
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
            ++D A  +F  + S G   D V Y T+I  + +   V    +L  ++ Q     NT+  
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I    + G +++A   F Q    G   DI  +  ++     N      + +FE M+ 
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    D      V+    K  + E A  L+  +  +G
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKG 465



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 214/468 (45%), Gaps = 7/468 (1%)

Query: 12  EARYSPSVFAYNV---VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
            AR S SV   ++   + +  LR  +   A  LF EM +    P    ++ L++   K  
Sbjct: 40  SARASSSVSGGDLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMK 99

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +D  IS  ++ME   +  DL  ++ +I         S A+S+  ++   G  PD V   
Sbjct: 100 KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIG 159

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           +++N F +     +A  L+++M E G +PD V+Y+ +++   +  +  +AL  F E+   
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK 219

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++ T   +++         DA RL   M K  I P+V++Y+ LL  + +     EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEA 279

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F  M R  I+ ++VTY+++I         ++A  +   M ++G  P+ ++Y+T+I  
Sbjct: 280 KEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
           + KA +++    LF+K+   G+  + V Y T+I  + +VG V  A+    ++      P+
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                  +  L   G +E+A  +F     +    DI  +  +I+   +  K  +   +F 
Sbjct: 400 IWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC 459

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
            +   G  PD      +++           + LY++M++EG + +D +
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSM 507



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 39/357 (10%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L  EM +    P  V ++ LL+  V+  K+   +S+  +M  +    DL T NI+I+ + 
Sbjct: 72  LFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                  A  +   M K+G +P  V+  +L+  +       +A+ L   M       ++V
Sbjct: 132 CCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIV 191

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN +I    K+     A +  +E+  +GI PN +TY+ ++     +G+ + AA L + +
Sbjct: 192 AYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
               +  + + Y  ++ A+ + G V  AK +  E+ +    P+ +   + I  L    RI
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +EA                                    ++F+ M S G FPD      +
Sbjct: 312 DEAN-----------------------------------QMFDLMVSKGCFPDVVSYNTL 336

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           +N + K +  E    L+ +M + G V +   +  ++  +    D +  +  F ++DS
Sbjct: 337 INGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 5/270 (1%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           DA  LF  M K    PS+V +N LL    + + +   I L + M+   I  ++ T+N +I
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             +    +   A +++ +M   G EP+ +T  +++  + +  ++  A  L  K+   G  
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWV 387
            D V Y  +I +  +   V  A     E+     +PN +     +  L  +GR  +A  +
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            R         ++  +  +++ F +N K     E+FE+M      PD    + ++N    
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQML 477
               + A+ ++  M  +GC F D V +  L
Sbjct: 308 HDRIDEANQMFDLMVSKGC-FPDVVSYNTL 336


>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 225/462 (48%), Gaps = 14/462 (3%)

Query: 11  EEARYSPSVFA---YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           E A +S + F    YN ++    +A Q + A   F +M ++GI P   T++T+I   G  
Sbjct: 274 ERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNH 333

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  +   S L++M + R S D   Y+ LI L  K +D   A   F R+K S + PD V+Y
Sbjct: 334 GRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSY 393

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            T++  +   K+  EA  LI EM E+G++ D  + S L  +Y+E      +L  F   + 
Sbjct: 394 RTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEAGMPERSLLWFQRFHR 453

Query: 188 V-NCPLDLTTCNIMIDVYGQLDMAKDADRLF-WSMRKMGIDPSVVSYNTLLRVYGEAELF 245
             N   +    N  ID YG+     +A+++F W   +  +  S V +N +++ YG  + +
Sbjct: 454 AGNMTSECYAAN--IDAYGERGHISEAEKVFLWCQERKNL--SAVEFNVMIKAYGVGKYY 509

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +A  LF  M +  +  +  +Y+++I++   + +   A   ++ MQ  G+  N I Y  +
Sbjct: 510 DKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAV 569

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP-- 363
           I+ + K G+L+ A  +++++   GV+ D ++Y  +I A    G V  A    +E+++   
Sbjct: 570 ISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGL 629

Query: 364 --NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             NT+   + I +  + G + EA   +R    + E   +    CMI L+++        E
Sbjct: 630 PGNTVIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAVYSSNCMIGLYTKQSMVEQAKE 689

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           +FE ++  G   +    A++L  Y  +  F+ A  + ++M++
Sbjct: 690 IFETLKKNGT-ANEFSFAMMLCLYKNIERFDVAIQIANQMRK 730



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 255/566 (45%), Gaps = 32/566 (5%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W N+  +   +V  YN+++R + RA++W L  GL+++M  RGI     TY TL
Sbjct: 140 RALEIFNWFNDN-KLELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVATNSTYGTL 198

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------ 114
           I  + K G+ + A+ WL+ M +  +  D V    +++L +K  ++ KA   F +      
Sbjct: 199 IDVYSKGGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWSLGEP 258

Query: 115 LKSSGI----VPDLV-------------AYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           L+ S       P+ V              YNT+I+ +GKA   KEA     +M +QG+ P
Sbjct: 259 LRPSNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPP 318

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
            TV+++T++++   + +  E  S+  +M E+ C  D  T N +I ++ + +    A + F
Sbjct: 319 TTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKHNDIDMATKYF 378

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M++  ++P  VSY TLL  Y   ++  EA  L   M  K +E +  T + + ++Y ++
Sbjct: 379 KRMKESYLEPDPVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYIEA 438

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              E++    Q     G    +  Y+  I  +G+ G +  A  +F   +     +  V +
Sbjct: 439 GMPERSLLWFQRFHRAG-NMTSECYAANIDAYGERGHISEAEKVFLWCQERK-NLSAVEF 496

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             MI AY        A +L   + +     +     + I +LA A +   A    ++   
Sbjct: 497 NVMIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKPYLKRMQV 556

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS-YGKLREFE 452
           AG V +   +  +I  F +  +      V+++M   G  PD  +  +++N+ YG  R  E
Sbjct: 557 AGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAGRVKE 616

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
            A    +E++  G   +  ++  ++ LY    +    +  +  L S          + + 
Sbjct: 617 -AISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQETYRLLQSSEEGPAVYSSNCMI 675

Query: 513 GIYERANRLNDASRIMNRMNKRRTFN 538
           G+Y + + +  A  I   + K  T N
Sbjct: 676 GLYTKQSMVEQAKEIFETLKKNGTAN 701



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 200/417 (47%), Gaps = 29/417 (6%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +D A+        +++  +++ Y+ +I +  +  +++    +++++ + GIV     Y T
Sbjct: 138 WDRALEIFNWFNDNKLELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVATNSTYGT 197

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+V+ K  L ++A   +E M E G++PD V+   ++ LY +  +F +A   F + + + 
Sbjct: 198 LIDVYSKGGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWS-LG 256

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
            PL  +  ++M       D  +  +R  +S    G      +YNTL+  YG+A    EA 
Sbjct: 257 EPLRPSNKHMM-------DAPESVERALFSNASFGSH----TYNTLIDTYGKAGQHKEAS 305

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             F  M ++ I    VT+NTMI I G     E+ ++L+++M      P+  TY+T+I++ 
Sbjct: 306 ETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLH 365

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K   +D A   F++++ S +E DPV Y+T++ AY    +V  A+ L+ E+ +      +
Sbjct: 366 TKHNDIDMATKYFKRMKESYLEPDPVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQ 425

Query: 370 TAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF-- 423
              + L R    AG  E +   F++   AG +     +   I+ +      +   +VF  
Sbjct: 426 FTQSALTRMYIEAGMPERSLLWFQRFHRAGNMTS-ECYAANIDAYGERGHISEAEKVFLW 484

Query: 424 ---EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               K  SA  F       +++ +YG  + ++ A  L+  M + G V +D+  +  L
Sbjct: 485 CQERKNLSAVEF------NVMIKAYGVGKYYDKACQLFDSMDKHG-VAADRCSYSSL 534



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  E  R + S   +NV+++     K ++ A  LFD M + G+A DR +YS+LI      
Sbjct: 484 WCQE--RKNLSAVEFNVMIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASA 541

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                A  +L++M+   +  + + Y  +I    KL     A  ++  +   G+ PD++ Y
Sbjct: 542 DQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVY 601

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +IN    A   KEA     E++  G+  +TV Y++L+ LY +     EA   +  +  
Sbjct: 602 GVLINALYGAGRVKEAISYANEIKRAGLPGNTVIYNSLIKLYTKVGNLREAQETYRLLQS 661

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS---------------------------- 219
                 + + N MI +Y +  M + A  +F +                            
Sbjct: 662 SEEGPAVYSSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEFSFAMMLCLYKNIERFDVA 721

Query: 220 ------MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
                 MRK+ +    +SYN +L +Y  A    EAI +F+ M    I+
Sbjct: 722 IQIANQMRKLELLTDSLSYNIVLDLYATAGRPKEAIEIFKDMVTASIQ 769



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 127/315 (40%), Gaps = 54/315 (17%)

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           K+  AL +F   N+    L++   NIMI + G+       + L+  M   GI  +  +Y 
Sbjct: 137 KWDRALEIFNWFNDNKLELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVATNSTYG 196

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ----- 288
           TL+ VY +  L  +A+     M    IE + VT   ++++Y K+ E +KA    +     
Sbjct: 197 TLIDVYSKGGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFFRKWSLG 256

Query: 289 --------------EMQNRGIEPNAI----TYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                         E   R +  NA     TY+T+I  +GKAG+   A+  F K+   G+
Sbjct: 257 EPLRPSNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGI 316

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
                                           P T+   T I I    GR+EE + + R+
Sbjct: 317 P-------------------------------PTTVTFNTMIHICGNHGRLEEVSSLLRK 345

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             +     D   +  +I L +++       + F++M+ +   PD      +L +Y   + 
Sbjct: 346 MGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYRTLLYAYSIRKM 405

Query: 451 FETADDLYSEMQEEG 465
              A++L +EM E+G
Sbjct: 406 VCEAEELITEMDEKG 420



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 27/251 (10%)

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           I  + ++ ++A  +     +  +E N I Y+ +I I G+A +      L+ ++ + G+  
Sbjct: 131 ILKQQVKWDRALEIFNWFNDNKLELNVIHYNIMIRILGRAREWALLEGLWNQMNARGIVA 190

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVF 388
               Y T+I  Y + GL   A   L  + +    P E  + I+     +AG  ++A   F
Sbjct: 191 TNSTYGTLIDVYSKGGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFF 250

Query: 389 RQ-------------AFDAGEVKDISVFG----------CMIELFSRNKKYANVIEVFEK 425
           R+               DA E  + ++F            +I+ + +  ++    E F K
Sbjct: 251 RKWSLGEPLRPSNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAK 310

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M   G  P +     +++  G     E    L  +M E  C    + +  ++SL+    D
Sbjct: 311 MLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKMGELRCSPDTRTYNTLISLHTKHND 370

Query: 486 FNMLESLFERL 496
            +M    F+R+
Sbjct: 371 IDMATKYFKRM 381


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 211/489 (43%), Gaps = 39/489 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  YN ++  + +A+  + A G+   M  +G+  D  TYST+I    K    D A  
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ M    V  D+V Y+ +I+   K     +A  +   +   G+ PD+V YNT+I+   
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+    A  +++ M ++ VKPD  +Y+ L++ Y+   ++ E +    EM       D+ 
Sbjct: 316 KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T ++++D   +     +A ++F+ M + GI P+V  Y  LL  Y       +   L  LM
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               I  N   +N ++  Y K    ++A ++   M   G+ P+ +TY  +I    K G++
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV---------------------------- 347
           D A + F ++ + GV  + V++ +++     V                            
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555

Query: 348 -------GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
                  G V  A+RL+  + +    PN I   T I     AGR +EA  +       G 
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  +  ++  + +  +  N   +F +M   G  P +   + +L      R F  A +
Sbjct: 616 KPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE 675

Query: 457 LYSEMQEEG 465
           LY  M + G
Sbjct: 676 LYLNMIKSG 684



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 41/484 (8%)

Query: 17  PSVFAYNVVLRN-VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P+V  Y ++L     R    +L   L D M   GI+P+ Y ++ ++  + K+ M D A+ 
Sbjct: 407 PNVTIYGILLHGYAARGAIADLTD-LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M Q  +S D+V Y  LI+   KL     A+  F+++ + G+ P+ V +N+++    
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +++A  L  EM +QGV+P+ V ++T++                             
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIM----------------------------- 556

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN+  +  GQ+ +A+   RL  SM ++G+ P+V+SYNTL+  +  A    EA  L  +M
Sbjct: 557 -CNLCNE--GQVMVAQ---RLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVM 610

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               ++ ++++Y+T+++ Y K+   + A  L +EM  +G+ P A+TYSTI+       + 
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  L+  +  SG + D   Y  ++    +   V  A ++   L     +PN I     
Sbjct: 671 SEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +L + GR ++A  +F      G V ++  +  M++   +         +F  M  +G 
Sbjct: 731 IDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGC 790

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PDS ++  ++ S     E   A    S++ E            ++SL+   +  N  +S
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKS 850

Query: 492 LFER 495
           L E+
Sbjct: 851 LPEK 854



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 190/404 (47%), Gaps = 11/404 (2%)

Query: 73  AISWLQQMEQ---DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           A+S   +M +   ++V  DL  YS L     +L       + F  +  +G   + V  N 
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 130 MINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE- 187
           ++N    AK   EA  +L+  M E G  P+ VS +TLL       +  EAL +   M E 
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 188 --VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
              NC  ++ T N +ID   +      A+ +   M   G+   VV+Y+T++    +A+  
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A  + + M  K ++ +VVTYNT+I    K+   ++A  ++Q M ++G++P+ +TY+TI
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---- 361
           I    KA  +DRA  + Q +    V+ D   Y  +I  Y   G      R L E+     
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P+ +     +  L + G+  EA  +F      G   +++++G ++  ++     A++ +
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + + M + G  P+++I  +VL +Y K    + A  ++S M + G
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 7/408 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ + +N+VL    +    + A  +F  M Q G++PD  TY  LI    K G  D A+ 
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT-MINVF 134
              QM  D V+ + V++++L+     +  + KA  +F  +   G+ P++V +NT M N+ 
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + ++    RL I+ M   GV+P+ +SY+TL+  +    +  EA  +   M  V    DL
Sbjct: 561 NEGQVMVAQRL-IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + + ++  Y +     +A  LF  M + G+ P  V+Y+T+L+       F EA  L+  
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +   + ++ TYN ++    K+   ++A  + Q + ++ + PN IT++ +I +  K G+
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  LF  + S G+  + V Y  M+    + GL+     L   + +    P    +  
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           + R+    G I  A     +  +     + S    +I LFSR ++Y N
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR-EEYKN 846



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 203/460 (44%), Gaps = 22/460 (4%)

Query: 96  IELARKLSDYSK--------AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           +EL R ++D ++        A+ +F  L        + A+N ++NV  +A+    + L +
Sbjct: 13  LELERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAV 72

Query: 148 EEMREQG------VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
                        V+PD  +YS L   +    +     + F  + +    ++    N ++
Sbjct: 73  SLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLL 132

Query: 202 DVYGQLDMAKDA-DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-- 258
           +         +A D L   M + G  P+VVS NTLL+     +   EA+ L   M     
Sbjct: 133 NGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGG 192

Query: 259 -EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                NVVTYNT+I    K+   ++A  ++Q M ++G++ + +TYSTII    KA  +DR
Sbjct: 193 GNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDR 252

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
           A  + Q +   GV+ D V Y T+I    +   V  A+ +L  +     +P+ +   T I 
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L +A  ++ A  V +   D     DI  + C+I  +    ++  V+   E+M + G  P
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D    +L+L+   K  +   A  ++  M  +G   +  ++  +L  Y AR     L  L 
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           + + ++       + ++V   Y +   +++A  I +RM++
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 1/245 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P+V +YN ++     A + + A  L D M   G+ PD  +Y TL+  + K G  
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+A    ++M +  V+   V YS +++       +S+A  ++  +  SG   D+  YN +
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     EA  + + +  + ++P+ ++++ ++++  +  +  +A+ +FA +     
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-VYGEAELFGEAI 249
             ++ T  IM+    Q  +  + D LF +M K G  P  V  N ++R + G  E+     
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815

Query: 250 HLFRL 254
           +L ++
Sbjct: 816 YLSKI 820


>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 172/333 (51%), Gaps = 1/333 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +  W+  E   S +++ YNV+L+ + R +QWE +  + ++M    + PD  TYSTL
Sbjct: 25  QALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTL 84

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+C  +    D+A++W  +M +     D+V YS +I++  K+  Y +AI+++ R+K +G 
Sbjct: 85  ISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGW 144

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD V Y TM+ +FG+A   + A  + EEM+  GV+PD + Y+ ++       +   AL 
Sbjct: 145 KPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALK 204

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VF EM       +  T + +++ Y +     +   +F  +R+ G+   V+ YN +L++  
Sbjct: 205 VFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQ-GVACDVIVYNAVLKMCR 263

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EA L  EA    R M     + N  TY  MI +Y K     +A     +M   G + + +
Sbjct: 264 EAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVM 323

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            Y++++  +G A + ++   +  ++ S     D
Sbjct: 324 AYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPD 356



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 185/392 (47%), Gaps = 43/392 (10%)

Query: 94  NLIELARKLSDYSKAISIFSRLK---SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           +++ +   L  + +A+ +F  L+   SS +  ++  YN M+ V  + + ++ ++ + E+M
Sbjct: 12  DVVAILNSLKSWRQALLLFRWLRAEHSSSL--NIYTYNVMLKVLRRGRQWEFSQQIAEDM 69

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
               V+PD ++YSTL++     +    A++ F  M+E  C                    
Sbjct: 70  ANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCV------------------- 110

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                           P VV+Y+T++ VYG+   + EAI L+  +++   + + VTY TM
Sbjct: 111 ----------------PDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTM 154

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           ++++G++     A ++ +EM+  G++P+AI Y+ +IA  G+AG++  A  +F+++   GV
Sbjct: 155 VRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGV 214

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWV 387
           + + V   T++  Y R G V     +   LRQ    + I     + +   AG   EA   
Sbjct: 215 KPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQY 274

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            R+  ++G   +   +  MI ++++          F +M  AGY  D      +L +YG 
Sbjct: 275 LREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGN 334

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            +E+    ++  EM    C   +++   +L+L
Sbjct: 335 AKEYNKVQEILDEMTSVNCAPDERLCCVILNL 366



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 160/332 (48%), Gaps = 5/332 (1%)

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           L++ T N+M+ V  +    + + ++   M    + P  ++Y+TL+           A+  
Sbjct: 41  LNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAW 100

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M       +VVTY+TMI +YGK  ++++A  L + ++  G +P+ +TY T++ ++G+
Sbjct: 101 FDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGR 160

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
           AG +  A  +F++++ SGV+ D ++Y  MI    R G + HA ++  E+     +PN + 
Sbjct: 161 AGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVT 220

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +   +R G + E   VF Q    G   D+ V+  ++++       +   +   +M 
Sbjct: 221 LSTVMETYSRCGNVMEGLEVF-QRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMT 279

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            +G+ P+      +++ Y K      A   +S+M E G       +  +L  YG  K++N
Sbjct: 280 ESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYN 339

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            ++ + + + S +    + L  V+  + +  +
Sbjct: 340 KVQEILDEMTSVNCAPDERLCCVILNLLDSCD 371



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 36/187 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN+++  + RA +   A  +F+EM + G+ P+  T ST++  + + G     +  
Sbjct: 181 PDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEV 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARK-----------------------------LSDYSK 107
            Q++ Q  V+ D+++Y+ ++++ R+                             +S Y+K
Sbjct: 241 FQRLRQG-VACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAK 299

Query: 108 ------AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A   FS++  +G   D++AY +++  +G AK + + + +++EM      PD   
Sbjct: 300 KGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPDERL 359

Query: 162 YSTLLNL 168
              +LNL
Sbjct: 360 CCVILNL 366



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/234 (19%), Positives = 97/234 (41%), Gaps = 5/234 (2%)

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-- 361
           ++AI        +A +LF+ LR+     ++   Y  M+    R      ++++  ++   
Sbjct: 13  VVAILNSLKSWRQALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANA 72

Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             +P+ I   T I+   R    + A   F +  +AG V D+  +  MI+++ +  KY   
Sbjct: 73  DVRPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEA 132

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           I ++E+++ AG+ PD      ++  +G+      A  ++ EM+  G      V+  M++ 
Sbjct: 133 IALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIAC 192

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            G          +FE ++ +           V   Y R   + +   +  R+ +
Sbjct: 193 LGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQ 246



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 60/142 (42%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN VL+    A     A     EM + G  P+ +TY  +I+ + K+GM   A     
Sbjct: 252 VIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTFS 311

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +     D++ Y++L++      +Y+K   I   + S    PD      ++N+     
Sbjct: 312 QMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPDERLCCVILNLLDSCD 371

Query: 139 LFKEARLLIEEMREQGVKPDTV 160
             +E  +L   +R      DT+
Sbjct: 372 TDEELGILRSCLRMCSSTMDTI 393


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 224/449 (49%), Gaps = 6/449 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P+V   N+++  + +A++ + A  +F+ M  +  +PD  T+ +LI   GK+G  
Sbjct: 297 KEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRV 356

Query: 71  DSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    ++M + D++  ++V+Y++LI    K         ++  +  SG  PDL+  NT
Sbjct: 357 DDAYRIYERMLDADQIP-NVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT 415

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            ++   KA   ++ R L EE++ +G  PDT SYS L++  V+     E   ++  M +  
Sbjct: 416 YMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C LD    N +ID + +      A +L   M+ MG  P+VV+Y +++    + +   EA 
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAY 535

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF   +   IE N V Y+++I  +GK    ++A  +M+EM  +G+ PN  T++ ++   
Sbjct: 536 MLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGL 595

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
            KA +++ A + FQ ++      + + Y  +I    +V     A     E++    +PNT
Sbjct: 596 VKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNT 655

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I     I+ LA++G + +A+ +F +   +G + D + +  MIE  S   +  +  ++FE+
Sbjct: 656 ITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEE 715

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETA 454
            R  G    +     +L++  K    E A
Sbjct: 716 TRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 236/552 (42%), Gaps = 67/552 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  P  +AYN ++     A +++ A+ L +  R +G  P    Y+ ++TC GK+G  
Sbjct: 193 EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKT 252

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++D +  +L  Y+ +I +  K  +   A  +   +K +G+ P++   N M
Sbjct: 253 DKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIM 311

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPD-------------------------------- 158
           I+   KA+   EA  + E M  +   PD                                
Sbjct: 312 IDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371

Query: 159 ---TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
               V Y++L+  + +  +  +   ++ EM    C  DL   N  +D   +    +    
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA 431

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  ++  G  P   SY+ L+    +A    E   L+  M+ +    +   YNT+I  + 
Sbjct: 432 LFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFC 491

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           KS +  KA  L++EM+  G  P  +TY +++    K  +LD A MLF++ +S+G+E++ V
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +Y ++I  + +VG                               R++EA  V  +    G
Sbjct: 552 IYSSLIDGFGKVG-------------------------------RVDEAYLVMEEMMQKG 580

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              ++  + C+++   + ++    +  F+ M+     P+     +++N   K+R+F  A 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
             + EMQ++G   +   +  M+S      +     SLFER  +   I     ++ +    
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700

Query: 516 ERANRLNDASRI 527
             ANR  DA ++
Sbjct: 701 SIANRALDAYQL 712



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 223/475 (46%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y  +V     ++R   R  + + A  L DEM+      D   Y+  I CFGK G  
Sbjct: 88  QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKV 147

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +M+ + +  D V Y++++ +  K +   +A+ IF +++ +  VP   AYNTM
Sbjct: 148 DMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM 207

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  R +G  P  V+Y+ +L    +  K  +AL +F EM     
Sbjct: 208 IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +L T NI+I +  +    + A ++  +M++ G+ P+V + N ++    +A+   EA  
Sbjct: 268 P-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M  K    +  T+ ++I   GK    + A  + + M +    PN + Y+++I  + 
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K  + +    +++++  SG   D +L  T +    + G     + L  E++    +P   
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + +I    L +AG   E   ++    D G V D   +  +I+ F ++ K     ++ E+M
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           ++ G+ P       V++   K+   + A  L+ E +  G   +  ++  ++  +G
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 223/493 (45%), Gaps = 11/493 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + P+ +    ++ + +++++   A  L   MR     P    Y+TLI    + G  D 
Sbjct: 20  AGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDR 79

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            ++   QM++     ++ L + LI +  +      A+S+   +KS+    D+V YN  I+
Sbjct: 80  MLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCID 139

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN---EVN 189
            FGK      A     EM+  G+ PD V+Y++++ +  + ++  EA+ +F +M    +V 
Sbjct: 140 CFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVP 199

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C       N MI  YG      +A  L    R  G  PSVV+YN +L   G+     +A+
Sbjct: 200 CAYAY---NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKAL 256

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  M+R  +  N+ TYN +I +  K+   E A  +   M+  G+ PN  T + +I   
Sbjct: 257 RIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRL 315

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            KA KLD A  +F+ +       D   + ++I    + G V  A R+   +   + IP  
Sbjct: 316 CKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375

Query: 370 TAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
              T L R      R E+   ++++   +G   D+ +    ++   +  +      +FE+
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +++ G+ PD+   +++++S  K        +LY  M+++GCV   + +  ++  +     
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495

Query: 486 FNMLESLFERLDS 498
            N    L E + +
Sbjct: 496 VNKAYQLLEEMKT 508


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 227/491 (46%), Gaps = 45/491 (9%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R +P +  +N ++ ++++ K +  A  LF +M+ +GI PD +T + LI CF   G    
Sbjct: 4   VRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTF 63

Query: 73  AISWLQQMEQ------------------------------DRVSG-----DLVLYSNLIE 97
           + + L ++ +                              D+V       D V Y+ L+ 
Sbjct: 64  SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K+ +   A+ +   ++     P++V YNT+I+   K KL  EA  L  EM  +G+ P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + ++YSTL+  +    + +EA  +  EM   N   ++ T  I++D   +    K+A  L 
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGE---AIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             M K G+ P+VVSYNTL+  Y    L GE   A  +F  M +K +  NV +YN MI   
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYC---LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS   ++A NL++E+ ++ + PN +TYS++I  + K G++  A  L +++   G   D 
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y +++ A  +   +  A  L  +++    QPN       I  L + GR + A  +F+ 
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQH 420

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G   ++  +  MI    +       + +  KM   G  PD+    +++ S  +  +
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480

Query: 451 FETADDLYSEM 461
            + A+ L  EM
Sbjct: 481 NDKAEKLLHEM 491



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 174/360 (48%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS   L  + E+    P+V  YN ++  + + K    A+ L+ EM  RGI P+  TYSTL
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  F   G    A   L +M    ++ ++  Y+ L++   K     +A ++ + +   G+
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P++V+YNT+++ +      + A+ +   M ++GV P+  SY+ +++   ++ +  EA++
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  E+   N   +  T + +ID + +L     A  L   M   G    VV+Y +LL    
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + +   +A  LF  M+ + I+ N  TY  +I    K   H+ A  L Q +  +G   N  
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ +I+   K G LD A  +  K+  +G   D V ++ +I +         A++LLHE+
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 188/362 (51%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++A   + A  +  EM + G++PD  TYS LI  +   G ++SA   
Sbjct: 324 PKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIV 383

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME + +  +  ++S ++   R   ++ K+  +   +K+SG+ PD   YN MI+ FGK
Sbjct: 384 LKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGK 443

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    ++M  +G++PDTV+++TL++ + +      A  +F EM E      +TT
Sbjct: 444 FSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTT 503

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI+ +G+ +   D   L  +MR +G+ P+VV+Y TL+ +YG++  F +AI     M+
Sbjct: 504 FNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMK 563

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   YN +I  Y +    E+A N  + M+   ++P+ +  +++I  +G+  +  
Sbjct: 564 SAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDA 623

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  + + ++ + ++ D V Y T++ A  RV        +  E+      P   A  +L 
Sbjct: 624 EAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLR 683

Query: 377 RA 378
            A
Sbjct: 684 SA 685



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G++P   T   +I+  G  G    A +  ++M+ + +      Y+ L++   K      A
Sbjct: 286 GLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDA 345

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             I S ++ SG+ PD   Y+ +I+ +  A  ++ AR++++EM    + P++  +S +L  
Sbjct: 346 EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILAS 405

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +  ++ ++  V  EM       D    N+MID +G+      A   F  M   GI P 
Sbjct: 406 YRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V++NTL+  + +AEL   A  LF  M  K     V T+N MI  +G+    +    LM 
Sbjct: 466 TVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMG 525

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M++ G+ PN +TY+T+I I+GK+G+   A    + ++S+G++    +Y  +I AY + G
Sbjct: 526 NMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKG 585

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           L   A      +R    +P+ +   + I       R  EA  V +   +     D+  + 
Sbjct: 586 LSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYT 645

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +++   R  K+  V  V+E+M  AG  PD    A++
Sbjct: 646 TLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAML 682



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 166/323 (51%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP    Y++++     A +WE A  +  EM    I P+ Y +S ++  +   G +
Sbjct: 353 ERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEW 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             +   L++M+   V  D   Y+ +I+   K S    A+  F ++ S GI PD V +NT+
Sbjct: 413 QKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTL 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA+L + A  L EEM E+G  P   +++ ++N + E  ++ +  ++   M  +  
Sbjct: 473 IDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGL 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T   +ID+YG+     DA      M+  G+ PS   YN L+  Y +  L  +A++
Sbjct: 533 LPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVN 592

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FRLM+   ++ +++  N++I  +G+     +A ++++ M+   ++P+ +TY+T++    
Sbjct: 593 AFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALI 652

Query: 311 KAGKLDRAAMLFQKLRSSGVEID 333
           +  K ++   +++++  +G   D
Sbjct: 653 RVDKFNKVPSVYEEMILAGCTPD 675



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 203/491 (41%), Gaps = 41/491 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI--S 75
           S   YN ++    R    E A  L   MRQ G   D   YS +I    +    DS I   
Sbjct: 183 SPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQK 242

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +++ D++  D+ L +++I    K  D +KA+     +++SG+ P       +I+  G
Sbjct: 243 LYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALG 302

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    EA  + EEM++ G+KP T +Y+ LL  YV+     +A  + +EM       D  
Sbjct: 303 DSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDEC 362

Query: 196 TCNIMIDVYGQLD---------------------------MAKDADRLFWS--------M 220
           T +++ID Y                               +A   DR  W         M
Sbjct: 363 TYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEM 422

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G+ P    YN ++  +G+      A+  F  M  + I+ + VT+NT+I  + K+  H
Sbjct: 423 KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELH 482

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L +EM  +G  P   T++ +I  +G+  + D    L   +RS G+  + V Y T+
Sbjct: 483 ERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  Y + G  + A   L +++     P  T     I   A+ G  E+A   FR       
Sbjct: 543 IDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSL 602

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              +     +I  F  +++ A    V + M+     PD      ++ +  ++ +F     
Sbjct: 603 KPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPS 662

Query: 457 LYSEMQEEGCV 467
           +Y EM   GC 
Sbjct: 663 VYEEMILAGCT 673



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/486 (21%), Positives = 215/486 (44%), Gaps = 46/486 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A++ W+ +          Y++++  + R+++   A  L    +Q+ ++P   TY+ LI  
Sbjct: 139 AVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLL---SQQQALSP--LTYNALINA 193

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI--SIFSRLKSSGIV 121
             +    + AI+ + +M QD    D V YS +I+   + +     I   ++S ++   + 
Sbjct: 194 CARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLE 253

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+   N +I  F KA    +A   +  ++  G+ P T +   +++   ++ + +EA ++
Sbjct: 254 LDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAI 313

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F EM                                   +  G+ P   +YN LL+ Y +
Sbjct: 314 FEEM-----------------------------------KDNGLKPKTRAYNGLLKGYVK 338

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A +  +A  +   M+R  +  +  TY+ +I  Y  +   E A  +++EM+   I PN+  
Sbjct: 339 AGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYV 398

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLL 357
           +S I+A +   G+  ++  + +++++SGV  D   Y  MI  + +   + HA     ++L
Sbjct: 399 FSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKML 458

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E  QP+T+   T I    +A   E A  +F +  + G    ++ F  MI  F   +++ 
Sbjct: 459 SEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWD 518

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +V  +   MRS G  P+      +++ YGK   F  A +   +M+  G   S  ++  ++
Sbjct: 519 DVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALI 578

Query: 478 SLYGAR 483
           + Y  +
Sbjct: 579 NAYAQK 584



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 139/306 (45%), Gaps = 11/306 (3%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L Q++ +    +TYN +I    ++ + EKA NL+  M+
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQQQALSP--LTYNALINACARNNDLEKAINLISRMR 211

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G   + + YS II    ++ ++D   +  L+ +++   +E+D  L   +IV + + G 
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271

Query: 350 VAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A   L  ++     PR       I+ L  +GRI EA  +F +  D G       +  
Sbjct: 272 PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNG 331

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++ + +     +   +  +M  +G  PD    +L++++Y     +E+A  +  EM+   
Sbjct: 332 LLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANN 391

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
            + +  V  ++L+ Y  R ++     + + + +      +  ++V+   + + + L+ A 
Sbjct: 392 IMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAM 451

Query: 526 RIMNRM 531
              ++M
Sbjct: 452 DTFDKM 457


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 226/469 (48%), Gaps = 22/469 (4%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  Y+ +++ +    +   A  LF  M++ G  PD  TY TL+    + G  + A+   Q
Sbjct: 382 IVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQ 441

Query: 79  QMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           +M  D      +    L+ YS +I+   K     +A  +F  +K+ GI+PD+++Y T+I+
Sbjct: 442 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIH 501

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F  +  +++A+ L  EM + G++PD  + S L+++  +  K +EA  +   + +  C L
Sbjct: 502 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIL 561

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ TC  ++           A +LF  M+K+G  P+VV+  TL++   ++     A+ L 
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621

Query: 253 RLMQRK------EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           + M           + N ++Y+ +I    K    ++A  L +EM+  G+ P+ I+Y+++I
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 681

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
             + ++GK   A  LF ++   GV+ D   +  +I    + G V  A  LL  + Q    
Sbjct: 682 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 741

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT+   T +  L    RI EAT +F +    G + D+  +G +++   +       +E+
Sbjct: 742 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801

Query: 423 FEKMRS------AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +KM S        + PD    +++++   K    + A +L+ EM+  G
Sbjct: 802 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 222/477 (46%), Gaps = 23/477 (4%)

Query: 7   DWINEEARYS----PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +N+  RY     P++ +Y++++  + + ++ + A  LF EM+ +G+ PD  +Y++LI 
Sbjct: 149 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 208

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            F   G ++ A     +M    +  D+     LI++  K     +A  +   +   G + 
Sbjct: 209 GFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V Y+T+I          EA  L   M++ G +PD ++Y TL+    +  K   AL + 
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328

Query: 183 AEM-NE-----VNC--PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
            EM N+     + C  P D+TT +++ID+  +     +A+ L   M + G    +V+Y+T
Sbjct: 329 QEMLNDTSQYGIKCIRP-DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 387

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR- 293
           L++         EA  LF  MQ+     + +TY T++K   ++     A  L QEM N  
Sbjct: 388 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 447

Query: 294 ---GI--EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
              GI  +P  I+YS II    K  + D A  LF+++++ G+  D + Y T+I  +   G
Sbjct: 448 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG 507

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
               AK L +E+     QP+       I +L + G++ EA  +       G + D+    
Sbjct: 508 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +++      + +   ++F KM+  G  P+    A ++    +    + A +L+  M
Sbjct: 568 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 225/509 (44%), Gaps = 62/509 (12%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  Y+ +++ +    +   A  LF  M++ G  PD  TY TL+    + G  + A+   Q
Sbjct: 89  IVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQ 148

Query: 79  QMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           +M  D      +    L+ YS +I+   K     +A  +F  +K+ G++PD+++Y ++I+
Sbjct: 149 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 208

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F  +  +++A+ L  EM + G++PD  +   L++++ +  K +EA  +   M    C L
Sbjct: 209 GFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +I          +A +LF SM+K+G  P  ++Y TL++   +      A+HL 
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328

Query: 253 RLM----------------------------QRKEIEQN--------------VVTYNTM 270
           + M                            + K IE N              +VTY+T+
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388

Query: 271 IKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           IK  G  +EH   +AT L   MQ  G  P+AITY T++    + G ++ A  L Q++ + 
Sbjct: 389 IK--GLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLND 446

Query: 329 ----GVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
               G++  P L  Y  +I    +      A+ L  E++     P+ I   T I     +
Sbjct: 447 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLS 506

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G+ E+A  +F +  D G   D++    +I++  +  K     ++ E +   G   D    
Sbjct: 507 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTC 566

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCV 467
             ++           A  L+ +MQ+ GC+
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCM 595



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 196/421 (46%), Gaps = 51/421 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  ++     + +WE A  LF+EM   GI PD  T S LI    K+G    A   
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV----------- 125
           L+ + Q     D+V  + L++        SKA  +F +++  G +P++V           
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610

Query: 126 ------------------------------AYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                         +Y+ +I+   K     EAR L +EM+  GV
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            PD +SY++L++ +  + K+ +A  +F EM ++    D+TT +++ID+  +     +A+ 
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M + G  P+ V+Y TL++     +   EA  LF  MQ+     +VVTY T++K   
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790

Query: 276 KSLEHEKATNLMQEMQN------RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++   + A  L ++M +         +P+ I+YS II    K G+ D A  LF+++++ G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEAT 385
           V  + + Y ++I  + R G +  AK L +E+     Q N +     I    + G+I++A 
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910

Query: 386 W 386
           +
Sbjct: 911 F 911



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 256/588 (43%), Gaps = 75/588 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST---------LITCFGKE 67
           P  F +N+++  +   K+          + +RG  PD  TYS          LI    KE
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD---- 123
           G    A   L+ M Q     D+V YS LI+        S+A  +F  ++  G  PD    
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 124 -------------------------------------LVAYNTMINVFGKAKLFKEARLL 146
                                                L++Y+ +I+   K +   EAR L
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
            +EM+ QG+ PD +SY++L++ +  + K+ +A  +F EM +V    D+TT  ++ID++ +
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
                +A+ L   M   G    +V+Y+TL++         EA  LF  M++     + + 
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQN-------RGIEPNAITYSTIIAIWGKAGKLDRAA 319
           Y T++K   ++ +   A +L QEM N       + I P+  T S +I I  K GK+  A 
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            L + +   G  +D V Y T+I        ++ A  L   +++    P+ I   T +  L
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427

Query: 376 ARAGRIEEATWVFRQAF-DAG----EVKDISV-FGCMIELFSRNKKYANVIEVFEKMRSA 429
            + G I  A  + ++   D G    + K   + +  +I+   ++++     E+FE+M++ 
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ 487

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC---VFSDQVHFQMLSLYGARKDF 486
           G  PD      +++ +    ++E A  L++EM + G    V +  V   ML   G   + 
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 547

Query: 487 N-MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           N +LE + +R      ++      +V G+  + +R++ A+++  +M K
Sbjct: 548 NKLLEVVIQR---GCILDVVTCTTLVKGLCMK-HRISKATQLFLKMQK 591



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 26/443 (5%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS---------NL 95
           MR  G+ PD +T++ LI C       +  ++ +  + +     D+V YS          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I++  K     +A  +   +   G + D+V Y+T+I          EA  L   M++ G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEM-NE-----VNCPLDLTTCNIMIDVYGQLDM 209
           +PD ++Y TL+    +      AL +  EM N+     + C   L + +I+ID   +   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +A  LF  M+  G+ P V+SY +L+  +  +  + +A  LF  M    I+ +V T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I ++ K  +  +A  L++ M +RG   + +TYST+I       ++  A  LF  ++  G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----------QPNTIPRETAITILARA 378
              D + Y T++    + G +  A  L  E+            +P+       I IL + 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G++ EA  +       G + DI  +  +I+      + +    +F  M+  G  PD+   
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 439 ALVLNSYGKLREFETADDLYSEM 461
             ++    +      A  L+ EM
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEM 443



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 8/281 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +Y++++  + +  + + A  LF EM+  G+ PD  +Y++LI  F + G +  A   
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    V  D+  +S LI++  K     +A  +   +   G +P+ V Y T++     
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE------VNC 190
                EA  L  +M++ G  PD V+Y TL+    +      AL +  +M         N 
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ + +I+ID   +     +A  LF  M+ +G+ P+V+SY +L+  +  +    +A H
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 876

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           LF  M  + ++ N VTY+ MI  + K  + +KA  L Q+M+
Sbjct: 877 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 190/458 (41%), Gaps = 55/458 (12%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST---------L 165
           ++ +G+ PD   +N +IN     K   E    +  +  +G  PD V+YS          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +++  +  K +EA  +   M +  C LD+ T + +I          +A  LF SM+K+G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK------EIEQNVVTYNTMIKIYGKSLE 279
            P  ++Y TL++   +      A+ L + M         + +  +++Y+ +I    K   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A  L +EM+ +G+ P+ I+Y+++I  +  +GK ++A  LF ++   G++ D      
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 340 MIVAYERVGLVAHAKRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I  + + G V  A  LL    H     + +   T I  L    RI EAT +F      G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKM--RSAGYF-----PDSHIIALVLNSYGKL 448
              D   +G +++   +  K    + + ++M   ++ Y      PD    +++++   K 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 449 REFETADDLYSEMQEEGCVFSDQVH-------------------FQMLSLYGARKDFNML 489
            +   A++L   M + GC+     +                   F  +   G R D    
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 490 ESLFERLDSDSNIN-KKELHHVVAGIYERANRLNDASR 526
            +L + L    NIN   +LH            LND  R
Sbjct: 421 GTLMKGLCQTGNINIALQLHQ---------EMLNDTGR 449



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 47/95 (49%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  + +  + + A  LF EM+  G+ P+  +Y++LI  F + G  + A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
               +M    V  + V YS +I    K     KA+
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 208/458 (45%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDS 72
           +  P+  AYN ++  ++   Q+E  H L++EM   G   PD  TYS LI+ F K G  DS
Sbjct: 189 KCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDS 248

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI  L +M+++ +     +Y+ +I L  KL +   A+S+F  ++     PD+  Y  +I 
Sbjct: 249 AIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIR 308

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    EA     EM+ +G KPDTV  + ++N   +  +  + L +F EM   +C  
Sbjct: 309 GLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHC-- 366

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHL 251
                                             P+VV+YNT+++   E++    E    
Sbjct: 367 ---------------------------------IPNVVTYNTIIKALFESKSRVSEVFSW 393

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A + D A  LFQ+L+ +       +Y  MI    + G +  A  L  E+ +    PN   
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               ++ LARA  ++EA    R+  + G + DI+ +  ++   ++       +E+   M+
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++   PD+     VL++      FE A +L  EM   G
Sbjct: 574 NSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 187/427 (43%), Gaps = 38/427 (8%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           ++R    D  TY  LI C      +      +Q+M +  +   +V    L ++ R L + 
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPIC--VVTPMELSQVIRMLGNA 172

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
               KAI+IF ++K+    P   AYN+MI +      +++   L  EM  +G  +PDTV+
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVT 232

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM E           ++I ++ +LD    A  LF  MR
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            M   P V +Y  L+R  G+A    EA H +  MQR+  + + V  N MI   GK+   +
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
               L +EM      PN +TY+TII A++    ++      F++++ SG+   P  Y  +
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I  +                                +  RIE+A  +  +  + G     
Sbjct: 413 IDGF-------------------------------CKTNRIEKAMMLLEEMDEKGFPPCP 441

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  +I+   + K+Y    E+F++++       + + A+++   GK    + A +L+ E
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501

Query: 461 MQEEGCV 467
           M + GC 
Sbjct: 502 MSKLGCT 508



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 39/340 (11%)

Query: 11  EEARY---SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE RY    P VF Y  ++R + +A + + A+  + EM++ G  PD    + +I   GK 
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKA 348

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D  +   ++M       ++V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFT 408

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++   +  ++  A  +F E+ 
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E           +MI   G+     DA  LF  M K+G  P+V +YN L+     A +  
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528

Query: 247 EAIHLFRLMQR-----------------------------------KEIEQNVVTYNTMI 271
           EA+   R MQ                                      I+ + V+YNT++
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                +   E+A  LM+EM   G E + ITYS+I+   GK
Sbjct: 589 SALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 182/392 (46%), Gaps = 11/392 (2%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT---CNIMIDVYGQL 207
           +++  + DT +Y  L++      ++ E   +  EM  V  P+ + T    + +I + G  
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEM--VRSPICVVTPMELSQVIRMLGNA 172

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVT 266
            M   A  +F+ ++     P+  +YN+++ +      + +   L+  M  +   + + VT
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVT 232

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y+ +I  + K    + A  L+ EM+  G++P A  Y+ II+++ K   +  A  LF+++R
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
                 D   Y  +I    + G +  A    HE++    +P+T+     I  L +AGR++
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +   +F +   +  + ++  +  +I+ LF    + + V   FE+M+ +G  P     +++
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           ++ + K    E A  L  EM E+G       +  ++   G  K +++   LF+ L  +  
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            +   ++ V+     +A RL+DA  + + M+K
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK+++LA  LF E+++   +     Y+ +
Sbjct: 424 KAMMLLEEMDEKG-FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G  D AI+   +M +   + ++  Y+ L+    +     +A++   +++  G 
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++N   K      A  ++  M+   +KPD VSY+T+L+       F EA  
Sbjct: 543 LPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAE 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN +    DL T + +++  G++D
Sbjct: 603 LMKEMNALGFEYDLITYSSILEAIGKVD 630


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 212/466 (45%), Gaps = 51/466 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y  V+  + +AK+ E +  LF EM++ G+ PD YTY+ LI  F K G+ + A 
Sbjct: 448 FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           SW  +M     S ++V Y+ L+    K     +A  IF R+  +   P+ V Y+ +I+  
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567

Query: 135 GKAKLFKEARLLIEEM----------------REQGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA   ++A  + E++                    + P+ V+Y  L++   +  K  +A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + ++    +A  +F  M K G  PSV +Y +L+ R
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M       NVVTY  MI    K  E EKA NL+  M+ +G  P
Sbjct: 688 MFKDGRL-DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I   GK GK D +  LF+++ S G   + V Y+ +I      GL+  A  LL
Sbjct: 747 NVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E++  +                     W           K +  + C ++ FS  KK+ 
Sbjct: 807 DEMKHTH---------------------W----------PKHLQGYHCAVQGFS--KKFI 833

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             + + E+M S    P + +  ++++S+ K    ETA +L+ E+ E
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/548 (22%), Positives = 244/548 (44%), Gaps = 33/548 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q E+   +  EM   G   DR T         K G +  A 
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA- 258

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++  + D VL + +I    + S +++A+S   R++ +  +P++V Y T+++ F
Sbjct: 259 --LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGF 316

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K F   + +I  M  +G  P+   +++L++ Y     +  A  +F  M     P   
Sbjct: 317 LKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGY 376

Query: 195 TTCNIMI-DVYGQLDMAKD-----ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + GQ ++         ++++  M       + V+     R       F +A
Sbjct: 377 VAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKA 436

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + + M RK    +  TY  +I    ++ + EK+  L QEM+  G+ P+  TY+ +I  
Sbjct: 437 FQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + KAG +++A   F ++RS G   + V Y  ++ AY +   +  A  + H +      PN
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFD-AGEVK---------------DISVFGCMIE 408
            +     I  L +AG I++A  V+ +    +G V+               ++  +G +I+
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALID 616

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              + +K ++  E+ + M +AG  P+  +   +++ + K+ + + A +++  M + G + 
Sbjct: 617 GLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLP 676

Query: 469 SDQVHFQMLS--LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
           S   +  ++       R D  M + L E L+   N N      ++ G+  +   +  A  
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAM-KVLSEMLNDSCNPNVVTYTAMIDGL-SKVGEIEKALN 734

Query: 527 IMNRMNKR 534
           +++ M ++
Sbjct: 735 LLSLMEEK 742



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 56/405 (13%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           N+    +P+V  Y  ++  + +A++   AH L D M   G  P++  Y  LI  F K G 
Sbjct: 599 NDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGK 658

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D+A     +M +      +  Y++LI+   K      A+ + S + +    P++V Y  
Sbjct: 659 IDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTA 718

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI+   K    ++A  L+  M E+G  P+ V+Y+ L++   +  K   +L +F +MN   
Sbjct: 719 MIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C                                    P+ V+Y  L+     A L  EA 
Sbjct: 779 CA-----------------------------------PNYVTYRVLINHCCAAGLLDEAH 803

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+     +++  Y+  ++ + K      +  L++EM++    P A  Y  +I  +
Sbjct: 804 LLLDEMKHTHWPKHLQGYHCAVQGFSKKF--IASLGLLEEMESHETVPIAPVYGMLIDSF 861

Query: 310 GKAGKLDRAAMLFQKL--RSSGVEIDPV-LYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            KAG+L+ A  L ++L   SS + +    +Y ++I A      V  A  L  E+ +   +
Sbjct: 862 SKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIV 921

Query: 367 PRETAITILARA---------------GRIEEAT-WVFRQAFDAG 395
           P       L +                GR  E   W   ++FD G
Sbjct: 922 PDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVNWQDNKSFDGG 966



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/431 (22%), Positives = 181/431 (41%), Gaps = 13/431 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           RQ G +     Y  L    G E    +A   L+++ +D       L + L+    +   +
Sbjct: 126 RQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLW 185

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
            +A+    RLK  G  P  V YN ++ V   A   +    + +EM   G   D  +    
Sbjct: 186 DEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYF 245

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
                +  ++ +AL++  E  + N  LD   C  MI    +  +  +A      MR    
Sbjct: 246 AQALCKVGRWADALNML-EKEDFN--LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSC 302

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+VV+Y TLL  + + + FG    +  +M  +    N   +N+++  Y  + ++  A  
Sbjct: 303 IPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYK 362

Query: 286 LMQEMQNRGIEPNAITYSTII-AIWGK-----AGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           L   M   G  P  + Y+  I +I G+     A  LD    +++++ ++   ++ V    
Sbjct: 363 LFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTAN 422

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
                  VG    A ++L E+ +    P+T      IT L +A ++E++  +F++   AG
Sbjct: 423 FSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D+  +  +I+ F +          F++MRS G  P+      +L++Y K ++   A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 456 DLYSEMQEEGC 466
           D++  M +  C
Sbjct: 543 DIFHRMVDAAC 553



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/296 (18%), Positives = 110/296 (37%), Gaps = 42/296 (14%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
             W+ R++G   +   Y+ L  + G  +    A  L R +   + E      N +++   
Sbjct: 121 FLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCC 180

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG------ 329
           +    ++A   +  +++ G  P+A+TY+ ++ +   AG+++    + +++ +SG      
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 330 --------------------------VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
                                       +D VL   MI       L   A   LH +R  
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN 300

Query: 364 NTIPR-ETAITILARAGRIEEATWVFR---QAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           + IP   T  T+L+   + ++  W  R        G   + S+F  ++  +     YA  
Sbjct: 301 SCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYA 360

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL------YSEMQEEGCVFS 469
            ++F +M + G  P      + + S     E   A+ L      Y EM    CV +
Sbjct: 361 YKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 226/471 (47%), Gaps = 10/471 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   +++++R     ++ + A   F  M+++GI P   T + +++ F K    + A    
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M + R+S  +  ++ ++ +  K     KA      ++  G  P++V+YNT+I+ +   
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + AR +++ MR +G++PD+ +Y +L++   +  +  EA  +F +M E+    +  T 
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 198 NIMIDVYGQLDMAKDADRLFW---SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N +ID Y       D +R F     M K GI PSV +YN L+         GEA  + + 
Sbjct: 336 NTLIDGYCN---KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 392

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++K I  + +TYN +I  Y +    +KA +L  EM ++GIEP  +TY+++I +  +  +
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +  A  LF+K+   GV  D +++  M+  +   G V  A  LL E+ + +  P E     
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     R G++EEA  +  +    G   D   +  +I  + R     +   V ++M S G
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           + P       ++    K +E + A++L  EM  +G    D  +  ++   G
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 203/431 (47%), Gaps = 4/431 (0%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ +E    P +   N +L   L+  + E+A  L+ EM +  I+   YT++ ++    KE
Sbjct: 181 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 240

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G    A  ++  ME      ++V Y+ +I       +   A  I   ++  GI PD   Y
Sbjct: 241 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 300

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            ++I+   K    +EA  L ++M E G+ P+ V+Y+TL++ Y        A S   EM +
Sbjct: 301 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 360

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                 ++T N+++          +AD +   MRK GI P  ++YN L+  Y       +
Sbjct: 361 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 420

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L   M  K IE   VTY ++I +  +    ++A +L +++ ++G+ P+ I ++ ++ 
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
                G ++RA ML +++    V  D V + T++    R G V  A+ LL E++    +P
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T I+   R G I++A  V  +    G    +  +  +I+   +N++     E+ 
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600

Query: 424 EKMRSAGYFPD 434
           ++M + G  PD
Sbjct: 601 KEMVNKGISPD 611



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 184/398 (46%), Gaps = 39/398 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V +YN ++         E A  + D MR +GI PD YTY +LI+   KEG  + A 
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA- 316

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                      SG   L+  ++E+                    G+VP+ V YNT+I+ +
Sbjct: 317 -----------SG---LFDKMVEI--------------------GLVPNAVTYNTLIDGY 342

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 + A    +EM ++G+ P   +Y+ L++      +  EA  +  EM +     D 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+I+ Y +   AK A  L   M   GI+P+ V+Y +L+ V        EA  LF  
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  + +  +V+ +N M+  +  +   E+A  L++EM  + + P+ +T++T++    + GK
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           ++ A ML  +++  G++ D + Y T+I  Y R G +  A R+  E+      P  +    
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            I  L +    + A  + ++  + G   D S +  +IE
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 142/299 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++         E A    DEM ++GI P   TY+ L+     EG    A   
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +  +  D + Y+ LI    +  +  KA  + + + S GI P  V Y ++I V  +
Sbjct: 390 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  L E++ +QGV PD + ++ +++ +  N     A  +  EM+  + P D  T
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +    ++A  L   M++ GI P  +SYNTL+  YG      +A  +   M 
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  ++TYN +IK   K+ E + A  L++EM N+GI P+  TY ++I   G    L
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 186/412 (45%), Gaps = 7/412 (1%)

Query: 80  MEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           + +DR+S    +++  L+ +  +L    +A   F  +K  GIVP +   N M+++F K  
Sbjct: 147 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 206

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             + A +L  EM    +     +++ ++N+  +  K  +A      M  +    ++ + N
Sbjct: 207 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I  Y      + A R+  +MR  GI+P   +Y +L+    +     EA  LF  M   
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I  Y    + E+A +   EM  +GI P+  TY+ ++      G++  A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             + +++R  G+  D + Y  +I  Y R G    A  L +E+     +P  +   + I +
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L+R  R++EA  +F +  D G   D+ +F  M++    N        + ++M      PD
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
                 ++    +  + E A  L  EM+  G +  D + +  ++S YG R D
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRRGD 557



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 43/396 (10%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           Y  A+ + +RL S  +   L+       +    +LF E  L     R++     ++ +  
Sbjct: 107 YCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTL----SRDRLSVKSSIVFDL 162

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+ +  E  +  EA   F  M E      + TCN M+ ++ +L+  + A  L+  M ++ 
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 222

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I  +V ++N ++ V  +     +A      M+    + NVV+YNT+I  Y      E A 
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++  M+ +GIEP++ TY ++I+   K G+L+ A+ LF K+   G+  + V Y T+I  Y
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDI 400
              G +  A     E+ +   +P  +   +L  A    GR+ EA                
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD--------------- 387

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                               ++ ++MR  G  PD+    +++N Y +    + A DL++E
Sbjct: 388 --------------------DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           M  +G   +   +  ++ +   R      + LFE++
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 107/231 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN+++    R    + A  L +EM  +GI P   TY++LI    +      A   
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    VS D+++++ +++      +  +A  +   +    + PD V +NT++    +
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 519

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EAR+L++EM+ +G+KPD +SY+TL++ Y       +A  V  EM  +     L T
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 579

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            N +I    +      A+ L   M   GI P   +Y +L+   G  +   E
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 193/402 (48%), Gaps = 5/402 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +SP    +N ++    R      A  + D M ++G  PD YTY++LI+   K G F+
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI  LQQM     S + V Y+ LI    K ++   A  +   L S G++PD+  +NT+I
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                +K    A  + EEM+ +G KPD  +YS L++      +  EAL +  EM    C 
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +    N +ID   +    +DA+ +F  M  +G+  S V+YNTL+    + +   EA  L
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  + ++ +  TYN+++  + +  + EKA +++Q M + G EP+  TY T+I    +
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG++D A+ L + ++  G+ + P  Y  +I A           RL  E+ + +  P    
Sbjct: 556 AGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALT 615

Query: 372 ITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             I+ R      G I+EA     +  + G + +   FG + E
Sbjct: 616 HKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAE 657



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 221/511 (43%), Gaps = 4/511 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  +  E  + P    YN+ L  ++   + +L   L  +M   GI  D  T++ LI   
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKAL 168

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K      AI  L++M    +  D + ++ L++   +  D + A+ +  ++   G +   
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTN 228

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V+   ++N F K    +EA   + E+ E+G  PD V++++L+N +       +AL +   
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M E     D+ T N +I    +L   + A  +   M      P+ V+YNTL+    +   
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              A  L R++  K +  +V T+NT+I+    S   + A  + +EM+N+G +P+  TYS 
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           +I       +L  A ML +++ SSG   + V+Y T+I    +   +  A+ +  ++    
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
              +++   T I  L +  R+EEA+ +  Q    G   D   +  ++  F R        
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           ++ + M S G  PD      ++    +    + A  L   +Q +G V +   +  ++   
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVV 511
             RK       LF  +   S+      H +V
Sbjct: 589 FMRKRTKEGMRLFREMMEKSDPPDALTHKIV 619



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 211/446 (47%), Gaps = 17/446 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR-EQ 153
           L++L +  S +    ++  +LKSSG +P+   + T+I  F     F E   L++ +  E 
Sbjct: 62  LLQLTQS-SSFDSITTLLKQLKSSGSIPNATTFATLIQSFTN---FHEIENLLKILENEL 117

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G KPDT  Y+  LN  VE++K      + ++M      LD++T N++I    +    + A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +   M   G+ P  +++ TL++ + E      A+ + + M         V+   ++  
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           + K    E+A   + E+   G  P+ +T+++++  + + G ++ A  +   +   G + D
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHE--LRQ--PNTIPRETAITILARAGRIEEATWVFR 389
              Y ++I    ++G    A  +L +  LR+  PNT+   T I+ L +   IE AT + R
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                G + D+  F  +I+    +K     +E+FE+M++ G  PD    +++++S    R
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD----SDSNINKK 505
             + A  L  EM+  GC  +  V+  ++      +     E +F++++    S S++   
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM 531
            L   + G+  +  R+ +AS++M++M
Sbjct: 478 TL---IDGLC-KNKRVEEASQLMDQM 499


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 228/509 (44%), Gaps = 47/509 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P  +AYN ++     A ++E A+ L + +R+RG  P   ++++++TC GK+   
Sbjct: 45  EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 104

Query: 71  DSAISWLQQMEQD-------------------------RVSGDL---VLYSNLIEL---- 98
           D A+S  + M++D                         R+  ++    L+ NL+ +    
Sbjct: 105 DEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 164

Query: 99  -----ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
                ARKL +   A  IF      G  PD V Y ++I+  GK     EA  L E+M + 
Sbjct: 165 DRLCKARKLEE---AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 221

Query: 154 GVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G   + V Y++L+ N ++   K  +   +F E+    C  DLT  N  +D   +    + 
Sbjct: 222 GHNANPVVYTSLIRNFFIHGRK-EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 280

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              +F  +R  G  P V SY+ L+    +A    E  ++F  M+++    +   YN ++ 
Sbjct: 281 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 340

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + KS +  KA  +++EM+ + ++P   TY  I+    K  +LD A MLF++ +S G+E+
Sbjct: 341 GFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 400

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           + VLY ++I  + +VG +  A  +L E+ +    PN     + +  L +A  I EA   F
Sbjct: 401 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 460

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           +   +     +   +  +I    R +KY      ++ M+  G  P+      +++   K+
Sbjct: 461 QSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKV 520

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQML 477
                A  L+   +  G +  D   F  L
Sbjct: 521 GNITDAYSLFERFKANGGI-PDAASFNAL 548



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 199/411 (48%), Gaps = 5/411 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD + E A   P++   N+++  + +A++ E A+ +F+   QRG  PD  TY +LI   
Sbjct: 144 ILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 202

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           GK+G  D A    ++M     + + V+Y++LI              IF  L   G  PDL
Sbjct: 203 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDL 262

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              NT ++   KA   ++ R++ E++R  G  PD  SYS L++   +  +  E  ++F  
Sbjct: 263 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 322

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +    LD    N ++D + +      A  +   M++  + P+V +Y  ++    + + 
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  LF   + K IE NVV Y+++I  +GK    ++A  +++EM  +G+ PN  T+++
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           ++    KA +++ A + FQ ++      +   Y  +I    RV     A     ++++  
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
             PN +   T I+ LA+ G I +A  +F +    G + D + F  +IE  S
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMS 553



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/433 (21%), Positives = 201/433 (46%), Gaps = 5/433 (1%)

Query: 37  LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           +A   F E++ +G+ PD  +Y+++I    K G    A     QME +R       Y+ +I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                   +  A  +  RL+  G +P +V++N+++   GK +   EA  L E M++   +
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AE 119

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P++ +Y+ ++++     +  EA  +  EM   +   +L T NIM+D   +    ++A ++
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F S  + G +P  V+Y +L+   G+     EA  LF  M       N V Y ++I+ +  
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
               E    + +E+  RG +P+    +T +    KAG++++  M+F+ +RS G   D   
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  +I    + G       + H ++Q     +       +    ++G++ +A  +  +  
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           +      ++ +G +++  ++  +      +FE+ +S G   +  + + +++ +GK+   +
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 419

Query: 453 TADDLYSEMQEEG 465
            A  +  EM ++G
Sbjct: 420 EAYLILEEMMKKG 432



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           + F  ++  G+ P  VSY +++ V  +A   GEA  LF  M+ +        YNTMI  Y
Sbjct: 4   KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           G +   E A  L++ ++ RG  P+ +++++I+   GK  K+D A  LF+ ++    E + 
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNS 122

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQ 390
             Y  +I      G V  A R+L E+   +  P    + I    L +A ++EEA  +F  
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
           A   G   D   +  +I+   +  +      +FEKM  AG+  +  +   ++ ++     
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 451 FETADDLYSEMQEEGC 466
            E    ++ E+   GC
Sbjct: 243 KEDGHKIFKELIRRGC 258



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 118/231 (51%), Gaps = 1/231 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  IL+ + E+    P+V  Y  ++  + +  + + A+ LF+E + +GI  +   YS+L
Sbjct: 350 KAYEILEEMKEKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G  D A   L++M +  ++ ++  +++L++   K  + ++A+  F  +K    
Sbjct: 409 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 468

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+   Y+ +IN   + + + +A +  ++M++QG+ P+ V+Y+T+++   +     +A S
Sbjct: 469 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 528

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           +F          D  + N +I+     + A +A +  W    M +D  + S
Sbjct: 529 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWLDTTMRLDCLIFS 579



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 4/160 (2%)

Query: 385 TWVFRQAFDAGEVK--DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            W F     A  +K  D+S +  MI +  +  +     E+F +M +    P ++    ++
Sbjct: 2   AWKFFHELKAQGLKPDDVS-YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
             YG    FE A  L   ++E GC+ S      +L+  G ++  +   SLFE +  D+  
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP 120

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
           N    ++++  +     R+ +A RI++ M     F + L 
Sbjct: 121 NSST-YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 159


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 228/562 (40%), Gaps = 74/562 (13%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VFAYN ++    R  Q + A  L   M    +APD YTY+ +I      G    A+S L 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M        +V Y+ L+E   K + + +A+ +   +++ G  P++V YN +IN   +  
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--------- 189
              +AR  +  +   G +PDTVSY+T+L       ++ +   +FAEM E N         
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 190 --------------------------CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                                     C  + T CNI+I+   +     DA +   +M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  P  +SY T+L+    AE + +A  L + M RK    N VT+NT I I  +    E+A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 284 TNLMQEMQNRGIE--------------------------------PNAITYSTIIAIWGK 311
           T L+++M   G E                                PN ITY+T++     
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A +LD AA L  ++       + V +  ++  + + GL+  A  L+ ++ +    PN I 
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +  + +    EEA  +       G   DI  +  +I + SR  +    I++F  ++
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  P + I   +L +  K    + A D ++ M   GC+ ++  +  ++          
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649

Query: 488 MLESLFERLDSDSNINKKELHH 509
               L   L S   +NK  L  
Sbjct: 650 ETRDLLRELCSRGVLNKNLLEE 671



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 11/477 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  + S    N  LR ++       A  L D    RG APD Y  + LI    + G   
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L+  E+   + D+  Y+ L+        Y +  +    + S  + PD   Y  +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVA---GYCRYGQLDAARRLIASMPVAPDAYTYTPII 152

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                     EA  L+++M  +G +P  V+Y+ LL    ++  F +A+ V  EM    C 
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N++I+   +     DA      +   G  P  VSY T+L+    A+ + +   L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  K    N VT++ +++ + +    E+A  ++++M   G   N    + +I    K
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-- 369
            G++D A      + S G   D + Y T++    R      AK LL E+ + N  P E  
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 370 --TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL + G IE+AT +  Q  + G   +I  +  ++  F    +  + +E+F  M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
                P++     +L         + A +L +EM ++ C   + V F +L  +  +K
Sbjct: 453 CK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA-PNVVTFNVLVSFFCQK 505



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 171/361 (47%), Gaps = 32/361 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y  VL+ +  AK+WE    LF EM ++   P+  T+  L+  F + GM + AI
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+QM     + +  L + +I    K      A    + + S G  PD ++Y T++   
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A+ +++A+ L++EM  +   P+ V+++T + +  +     +A  +  +M+E  C +++
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 195 TTCNIMID---VYGQLDMAKD-----------------------------ADRLFWSMRK 222
            T N +++   V G++D A +                             A  L   M +
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+VV++N L+  + +  L  EAI L   M       N++TYNT++    K    E+
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L+  + + G+ P+ +TYS+II +  +  +++ A  +F  ++  G+    V+Y  +++
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 343 A 343
           A
Sbjct: 606 A 606



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 5/325 (1%)

Query: 8   WINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           ++N    Y  SP   +Y  VL+ + RA++WE A  L  EM ++   P+  T++T I    
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           ++G+ + A   ++QM +     ++V Y+ L+           A+ +F  +      P+ +
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTI 458

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y T++     A+    A  L+ EM ++   P+ V+++ L++ + +     EA+ +  +M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E  C  +L T N ++D   +   +++A  L   +   G+ P +V+Y++++ V    +  
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EAI +F ++Q   +    V YN ++    K    + A +    M + G  PN +TY T+
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGV 330
           I        L     L ++L S GV
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGV 663



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 129/331 (38%), Gaps = 49/331 (14%)

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           D+A +A RL       G  P V     L+R         +A  + R  +R     +V  Y
Sbjct: 58  DLA-EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT++  Y +  + + A  L+  M    + P+A TY+ II      G++  A  L   +  
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
            G +   V Y  ++ A  +      A  +L E+R     PN +     I  + R GR+++
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A                                    E   ++ S G+ PD+     VL 
Sbjct: 234 AR-----------------------------------EFLNRLSSYGFQPDTVSYTTVLK 258

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE---SLFERLDSDS 500
                + +E  ++L++EM E+ C+  ++V F ML  +  R    M+E    + E++    
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRG--GMVERAIQVLEQMSGHG 315

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRM 531
                 L ++V     +  R++DA + +N M
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNM 346


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 216/494 (43%), Gaps = 46/494 (9%)

Query: 12  EARYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E   SP  VFAYN ++    R    + A  L   M    +APD YTY+ LI      G  
Sbjct: 103 EGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRV 159

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+S L  M +     ++V Y+ L+E   + S + +A+++   +++ G  P++V YN +
Sbjct: 160 ADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 219

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN- 189
           IN   +     +AR L+  +   G +PDTVSY+TLL     + ++ +   +FAEM E N 
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 190 ----------------------------------CPLDLTTCNIMIDVYGQLDMAKDADR 215
                                             C  + T CNI+I+   +     DA +
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFK 339

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M   G +P  +SY T+L+    AE + +A  L   M R     N VT+NT I I  
Sbjct: 340 LLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILC 399

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           +    E+A  L+++M   G     +TY+ ++  +   G +D A  LF   RS   + + +
Sbjct: 400 QKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTI 456

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
            Y T++        +  A  L+ E+ +    PN +     ++   + G +EEA  +  Q 
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            + G   ++  +  +++  +++    + +E+   + S G  PD    + ++    K    
Sbjct: 517 MEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRI 576

Query: 452 ETADDLYSEMQEEG 465
           E A  L+  +Q+ G
Sbjct: 577 EEAVQLFHVVQDIG 590



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 199/454 (43%), Gaps = 40/454 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y  +L+ +  +K+W+    LF EM ++   P+  T+  LI  F + GM + AI
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+QM +   + +  L + +I    K      A  + + + S G  PD ++Y T++   
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A+ + +A+ L+ EM      P+ V+++T + +  +     +A+ +  +M+E  C + +
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T N +++   V G +D A +   LF   R M   P+ ++Y TLL     AE    A  L
Sbjct: 424 VTYNALVNGFCVQGHIDSALE---LF---RSMPCKPNTITYTTLLTGLCNAERLDGAAEL 477

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M R +   NVVT+N ++  + +    E+A  L+++M   G  PN ITY+T++    K
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
               + A  L   L S GV                                P+ I   + 
Sbjct: 538 DCSSEDALELLHGLVSKGV-------------------------------SPDVITFSSI 566

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I IL++  RIEEA  +F    D G      V+  ++    +  +  N I+ F  M S G 
Sbjct: 567 IGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGC 626

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+     +++         + A DL S +   G
Sbjct: 627 MPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 42/277 (15%)

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  P+    + +I    + G+   AA + +    SG  +D   Y T++  Y R G +  A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 354 KRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           +RL+  +   P+       I +L   GR+ +A  +       G   ++  +  ++E   R
Sbjct: 131 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLN-------------------SYG------- 446
           N  +   + V ++MR+ G  P+     +++N                   SYG       
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 447 ---------KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE---SLFE 494
                      + ++  ++L++EM E+ C+  ++V F ML  +  R    M+E    + E
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCM-PNEVTFDMLIRFFCRG--GMVERAIQVLE 307

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++          L ++V     +  R++DA +++N M
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/563 (22%), Positives = 252/563 (44%), Gaps = 75/563 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P  +AYN ++     A ++E A+ L + +R+RG  P   ++++++TC GK+   
Sbjct: 311 EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 370

Query: 71  DSAISWLQQMEQD-------------------------RVSGDL---VLYSNLIEL---- 98
           D A+S  + M++D                         R+  ++    L+ NL+ +    
Sbjct: 371 DEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430

Query: 99  -----ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
                ARKL +   A  IF      G  PD V Y ++I+  GK     EA  L E+M + 
Sbjct: 431 DRLCKARKLEE---AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 487

Query: 154 GVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G   + V Y++L+ N ++   K  +   +F E+    C  DLT  N  +D   +    + 
Sbjct: 488 GHNANPVVYTSLIRNFFIHGRK-EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              +F  +R  G  P V SY+ L+    +A    E  ++F  M+++    +   YN ++ 
Sbjct: 547 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 606

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + KS +  KA  +++EM+ + ++P   TY  I+    K  +LD A MLF++ +S G+E+
Sbjct: 607 GFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           + VLY ++I  + +V                               GRI+EA  +  +  
Sbjct: 667 NVVLYSSLIDGFGKV-------------------------------GRIDEAYLILEEMM 695

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G   ++  +  +++   + ++    +  F+ M+     P+++  ++++N   +++++ 
Sbjct: 696 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 755

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVV 511
            A   + +MQ++G V +   +  M+S      +     SLFER  ++  I +    + ++
Sbjct: 756 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815

Query: 512 AGIYERANRLNDASRIMNRMNKR 534
            G+   ANR  +A ++      R
Sbjct: 816 EGM-SNANRAMEAYQVFEETRLR 837



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 211/433 (48%), Gaps = 11/433 (2%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD + E A   P++   N+++  + +A++ E A+ +F+   QRG  PD  TY +LI   
Sbjct: 410 ILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIV 121
           GK+G  D A    ++M     + + V+Y++LI    +  +  D  K   IF  L   G  
Sbjct: 469 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK---IFKELIRRGCK 525

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PDL   NT ++   KA   ++ R++ E++R  G  PD  SYS L++   +  +  E  ++
Sbjct: 526 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 585

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F  M +    LD    N ++D + +      A  +   M++  + P+V +Y  ++    +
Sbjct: 586 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 645

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            +   EA  LF   + K IE NVV Y+++I  +GK    ++A  +++EM  +G+ PN  T
Sbjct: 646 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 705

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           +++++    KA +++ A + FQ ++      +   Y  +I    RV     A     +++
Sbjct: 706 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 765

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    PN +   T I+ LA+ G I +A  +F +    G + D + F  +IE  S   +  
Sbjct: 766 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825

Query: 418 NVIEVFEKMRSAG 430
              +VFE+ R  G
Sbjct: 826 EAYQVFEETRLRG 838



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 221/459 (48%), Gaps = 5/459 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y   V  +  ++R + R  Q   A  L DE++   + PD   Y+  I CFGK G  
Sbjct: 206 QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 265

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +++   +  D V Y+++I +  K     +A  +F+++++   VP   AYNTM
Sbjct: 266 DMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F++A  L+E +RE+G  P  VS++++L    +  K  EALS+F  M +   
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 385

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P + +T NI+ID+       ++A R+   M    + P++++ N ++    +A    EA  
Sbjct: 386 P-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F    ++    + VTY ++I   GK  + ++A  L ++M + G   N + Y+++I  + 
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--R 368
             G+ +    +F++L   G + D  L  T +    + G V   + +  ++R    +P  R
Sbjct: 505 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 564

Query: 369 ETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I I  L +AG+  E + +F      G   D   +  +++ F ++ K     E+ E+M
Sbjct: 565 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     P       +++   K+   + A  L+ E + +G
Sbjct: 625 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 663



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 214/442 (48%), Gaps = 7/442 (1%)

Query: 29  VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGD 88
           ++RA++ + A      MR+    P    Y+ LI    +    + A+  L+QM++      
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           + L++ L+    +    + A+++   +K S + PD+V YN  I+ FGKA     A     
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTTCNIMIDVYGQL 207
           E++ QG+KPD VSY++++ +  +  +  EA  +FA+M  E + P      N MI  YG  
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY-NTMIMGYGSA 332

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
              +DA +L   +R+ G  PSVVS+N++L   G+     EA+ LF +M +K+ E N  TY
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTY 391

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I +       E+A  ++ EM++  + PN +T + ++    KA KL+ A  +F+    
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEE 383
            G   D V Y ++I    + G V  A RL  ++            T L R     GR E+
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 511

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              +F++    G   D+++    ++   +  +      +FE +RS G+ PD    +++++
Sbjct: 512 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 571

Query: 444 SYGKLREFETADDLYSEMQEEG 465
              K  +     +++  M+++G
Sbjct: 572 GLTKAGQARETSNIFHAMKQQG 593



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 218/458 (47%), Gaps = 6/458 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY V++  +  A++ E A  L  +M++ G     + ++TL+    +EG    A
Sbjct: 174 KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 233

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++ + +++   +  D+VLY+  I+   K  +   A   F  LK+ G+ PD V+Y +MI V
Sbjct: 234 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWV 293

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  L  +M  +   P   +Y+T++  Y    +F +A  +   + E  C   
Sbjct: 294 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 353

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + N ++   G+     +A  LF  M+K   +P+  +YN ++ +        EA  +  
Sbjct: 354 VVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILD 412

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  N++T N M+    K+ + E+A  + +    RG  P+ +TY ++I   GK G
Sbjct: 413 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 472

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
           ++D A  LF+K+  +G   +PV+Y ++I  +   G      ++  EL     +P+     
Sbjct: 473 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 532

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  + +AG +E+   +F      G + D+  +  +I   ++  +      +F  M+  
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 592

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           G+  D+     V++ + K  +   A ++  EM+E+ CV
Sbjct: 593 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK-CV 629



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 8/372 (2%)

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           AR+L D   A+++  RLK     P   AY  +I    +A+  + A  L+ +M+E G +  
Sbjct: 157 ARRLDDAVLAVAVMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
              ++TL+       +  +AL++  E+       D+   N+ ID +G+      A + F 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            ++  G+ P  VSY +++ V  +A   GEA  LF  M+ +        YNTMI  YG + 
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E A  L++ ++ RG  P+ +++++I+   GK  K+D A  LF+ ++    E +   Y 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 392

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDA 394
            +I      G V  A R+L E+   +  P    + I    L +A ++EEA  +F  A   
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D   +  +I+   +  +      +FEKM  AG+  +  +   ++ ++      E  
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 512

Query: 455 DDLYSEMQEEGC 466
             ++ E+   GC
Sbjct: 513 HKIFKELIRRGC 524



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 160/312 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  + +A Q      +F  M+Q+G A D   Y+ ++  F K G    A 
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M++  V   +  Y  +++   K+    +A  +F   KS GI  ++V Y+++I+ F
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EEM ++G+ P+  ++++LL+  V+  +  EAL  F  M E+ CP + 
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 738

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K G+ P+VV+Y T++    +     +A  LF  
Sbjct: 739 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  ++N +I+    +    +A  + +E + RG   N  +  +++    K+  
Sbjct: 799 FKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSEC 858

Query: 315 LDRAAMLFQKLR 326
           L++AA++   LR
Sbjct: 859 LEQAAIVGAVLR 870



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 160/363 (44%), Gaps = 6/363 (1%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           ++EEM   G      + + L    V   +  +A+   A M  +      +   ++I    
Sbjct: 131 VLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALA 190

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +    + A  L   M+++G +  V  + TL+R         +A+ L   ++   +E ++V
Sbjct: 191 EARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIV 250

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            YN  I  +GK+   + A     E++ +G++P+ ++Y+++I +  KAG+L  A  LF ++
Sbjct: 251 LYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM 310

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRI 381
            +         Y TMI+ Y   G    A +LL  LR+   IP      + +T L +  ++
Sbjct: 311 EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 370

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +EA  +F       E  + S +  +I++     +      + ++M  A  FP+   + ++
Sbjct: 371 DEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIM 429

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER-LDSDS 500
           ++   K R+ E A  ++    + GC      +  ++   G +   +    LFE+ LD+  
Sbjct: 430 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 489

Query: 501 NIN 503
           N N
Sbjct: 490 NAN 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  IL+ + E+    P+V  Y  ++  + +  + + A+ LF+E + +GI  +   YS+L
Sbjct: 616 KAYEILEEMKEKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G  D A   L++M +  ++ ++  +++L++   K  + ++A+  F  +K    
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+   Y+ +IN   + + + +A +  ++M++QG+ P+ V+Y+T+++   +     +A S
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 794

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F          D  + N +I+     + A +A ++F   R  G   ++ S  +LL    
Sbjct: 795 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALN 854

Query: 241 EAELFGEA 248
           ++E   +A
Sbjct: 855 KSECLEQA 862



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 91/173 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ +N +L  +++A++   A   F  M++    P+ YTYS LI    +   ++ A  
Sbjct: 700 TPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFV 759

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + Q M++  +  ++V Y+ +I    K+ + + A S+F R K++G +PD  ++N +I    
Sbjct: 760 FWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMS 819

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            A    EA  + EE R +G + +  S  +LL+   ++    +A  V A + E+
Sbjct: 820 NANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLREI 872


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 217/441 (49%), Gaps = 7/441 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+  YN +L  + R  + E A  LF EM  R  + D  +++ L+T   + G  ++A+ 
Sbjct: 42  SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALE 100

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + ++M+ DR S +++ YS LI+   K +  S+A+ +   +K+ G  PD++ Y  +++   
Sbjct: 101 FFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLC 159

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A  ++ EM + G  P+ V+Y++LL+      +  +AL++  +M    C  ++ 
Sbjct: 160 KESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV 219

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   +ID   ++   KDA  +   M   G  P ++ YN L+    +A+   E+I L R  
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 279

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               I+ +VVTY+++I    +S   ++A  L+  +++RG  P+ I YST+I    KAGK+
Sbjct: 280 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
           D A  L++ +   G + D V Y T+I    + G V  A  LL  +      P+T+   + 
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 399

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY-ANVIEVFEKMRSAG 430
           I  L     ++EA  +  +   +        +  +I    R ++  +  ++ F++M   G
Sbjct: 400 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG 459

Query: 431 YFPDSHIIALVLNSYGKLREF 451
             PD    +++L    K ++ 
Sbjct: 460 VIPDHITYSILLEGLKKSKDL 480



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 200/457 (43%), Gaps = 41/457 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++  + +  + + A  LF+ M+    +P   TY+TL+    + G  + A++ 
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M  DR S D++ ++ L+    +      A+  F ++      P+++ Y+ +I+   K
Sbjct: 68  FQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCK 125

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    +A  L+E M+ +G  PD ++Y+ L++   +  K   A  V  EM +  C      
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV----- 180

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                                         P++V+YN+LL     A    +A+ L R M 
Sbjct: 181 ------------------------------PNLVTYNSLLHGLCRARRVSDALALMRDMT 210

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +    NVVTY T+I    K    + A  ++ +M ++G  P+ + Y+ +I    KA ++D
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            +  L ++  S G++ D V Y ++I    R   +  A RLL  ++     P+ I   T I
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +AG+++EA  ++      G   D+  +  +I+   +  +      +  +M   G  
Sbjct: 331 DGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 390

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           P +     ++     L   + A +L  EM+   C  S
Sbjct: 391 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 427



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP+V  Y+V++  + +A +   A  L + M+ RG +PD  TY+ L+    KE    +A
Sbjct: 108 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 167

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              L++M       +LV Y++L+     AR++SD   A+++   +   G  P++V Y T+
Sbjct: 168 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD---ALALMRDMTCRGCTPNVVTYGTL 224

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    K+A  ++ +M ++G  PD + Y+ L+N   +  +  E++++         
Sbjct: 225 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + +I    + +   +A RL   ++  G  P V+ Y+TL+    +A    EA  
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+ +M     + +VVTY+T+I    K+   ++A  L+  M   G  P+ +TY+++I    
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV-AHAKRLLHELRQPNTIPRE 369
               LD A  L +++  S      V Y  +I    R+  V + A     E+     IP  
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464

Query: 370 TAITIL 375
              +IL
Sbjct: 465 ITYSIL 470



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 168/358 (46%), Gaps = 10/358 (2%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           ++  G  P++V YN++I+   K      A+ L E M+     P  V+Y+TLL+      K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG--IDPSVVSY 232
              A+++F EM +     D+ + NI++    +    + A   F   RKM     P+V++Y
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFF---RKMDDRCSPNVITY 116

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           + L+    +A    +A+ L   M+ +    +V+TY  ++    K  +   A  +++EM +
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
            G  PN +TY++++    +A ++  A  L + +   G   + V Y T+I    +VG V  
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 236

Query: 353 AKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  +L ++      P+ +     I  L +A +++E+  + R+A   G   D+  +  +I 
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
              R+ +      +   ++S G  PD  + + +++   K  + + A DLY  M  +GC
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP--VLYQTMIVAYERV 347
           M++ G EPN +TY+++I    K  + DRA  LF+ ++S  VE  P  V Y T++    R 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS--VECSPSMVTYNTLLDGLFRT 58

Query: 348 GLVAHAKRLLHEL---RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           G +  A  L  E+   R  + I     +T L RAG+IE A   FR+  D     ++  + 
Sbjct: 59  GKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYS 117

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  + +  +E+ E M++ G  PD     ++++   K  +   A ++  EM + 
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 465 GCV 467
           GCV
Sbjct: 178 GCV 180



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 2/140 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  Y+ ++  + +A + + AH L   M + G  P   TY++LI         D AI  ++
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 79  QMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +ME+   +   V Y+ LI  + R     S A+  F  +  +G++PD + Y+ ++    K+
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKS 477

Query: 138 KLFKEAR-LLIEEMREQGVK 156
           K   E R L++++M + G +
Sbjct: 478 KDLHELRHLVLDQMVQLGYR 497


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 215/453 (47%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+VF +N+V+  + +  +   A  LF  M+  G +PD  TY++LI  +GK G  +     
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M +   + D+V Y+ LI    K     KA S F  +K  G+V ++V ++T ++ F K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +EA  L  +MR +G+ P+  +Y++L++   +  +  +A+ +  EM       ++ T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             +M+D   +     +AD +   M + G+  + + Y TL+  +        A+ L   M+
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +E +V  Y T+I    K  + ++A +L+ +M   G+ PN + Y+TI+    KAGK  
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A  L  K+  SG + + V Y  +I    + G ++ A    +++R+    P   A T L 
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               + G + +A  +  +  D G   D  V+  +I+ + +     +   +  KM  +G  
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            D +     ++ +  +   + A  + SEM   G
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 208/451 (46%), Gaps = 4/451 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  YN ++    +    E    L  EMR+ G A D  TY+ LI CF K G  + A S
Sbjct: 232 SPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYS 291

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +  +M++  V  ++V +S  ++   K     +A+ +F++++  G++P+   Y ++++   
Sbjct: 292 YFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTC 351

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA    +A +L++EM  QG+ P+ V+Y+ +++   +  K  EA +V + M       +  
Sbjct: 352 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANEL 411

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +I  +   + ++ A  L   M+  G++  V  Y TL+    + +   EA  L   M
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N V Y T++    K+ +  +A  L+ ++ + G +PN +TY  +I    KAG +
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A   F K+R  G++ +   Y  +I  + ++G +  A  L++E+        +   T L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                +   +++A  +  +  ++G   D+  + C I  F           V  +M   G 
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            PD  +   ++  Y KL   E A  L +EM+
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 222/491 (45%), Gaps = 51/491 (10%)

Query: 36  ELAHGLFDEMRQRGIA--PDRYTYS----TLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
            LA  L D + +  +A  P R        TL++     G+ D A+  L ++ Q RV  + 
Sbjct: 110 HLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNT 169

Query: 90  VLYSN-LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
              ++ L+ LAR     ++   +  RL     VP++  +N +I+   K     EAR L  
Sbjct: 170 RTCNHILLRLAR-----NRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFV 224

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            M+  G  PD V+Y++L++ Y +     E   + +EM +  C  D+ T N +I+ + +  
Sbjct: 225 RMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFG 284

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             + A   F  M++ G+  +VV+++T +  + +  L  EA+ LF  M+ + +  N  TY 
Sbjct: 285 RMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYT 344

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL------------- 315
           +++    K+   + A  L+ EM ++G+ PN +TY+ ++    K GK+             
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG 404

Query: 316 ----------------------DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
                                 +RA  L  ++++ G+E+D  LY T+I    +   V  A
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464

Query: 354 KRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           K LLH++     +PNT+   T +  L +AG+  EA  +  +  D+G   ++  +  +I+ 
Sbjct: 465 KSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDG 524

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             +    +  I  F KMR  G  P+      +++ + K+     A  L +EM ++G    
Sbjct: 525 LCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLD 584

Query: 470 DQVHFQMLSLY 480
             V+  ++  Y
Sbjct: 585 KVVYTSLIDGY 595



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+L  I +   + P+V  Y  ++  + +A     A   F++MR+ G+ P+   Y+ LI
Sbjct: 499 AVALLHKILDSG-FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F K G  + A+  + +M    +S D V+Y++LI+   K ++   A ++ +++  SG+ 
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            DL  Y   I+ F    + +EAR ++ EM   G+ PD   Y+ L+  Y +     EA S+
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677

Query: 182 FAEMNEVNCPLDLTTCN 198
             EM  V     L++C 
Sbjct: 678 QNEMESV-----LSSCT 689


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 228/562 (40%), Gaps = 74/562 (13%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VFAYN ++    R  Q + A  L   M    +APD YTY+ +I      G    A+S L 
Sbjct: 144 VFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLD 200

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M        +V Y+ L+E   K + + +A+ +   +++ G  P++V YN +IN   +  
Sbjct: 201 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--------- 189
              +AR  +  +   G +PDTVSY+T+L       ++ +   +FAEM E N         
Sbjct: 261 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320

Query: 190 --------------------------CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                                     C  + T CNI+I+   +     DA +   +M   
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  P  +SY T+L+    AE + +A  L + M RK    N VT+NT I I  +    E+A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 284 TNLMQEMQNRGIE--------------------------------PNAITYSTIIAIWGK 311
           T L+++M   G E                                PN ITY+T++     
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 500

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A +LD AA L  ++       + V +  ++  + + GL+  A  L+ ++ +    PN I 
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +  + +    EEA  +       G   DI  +  +I + SR  +    I++F  ++
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 620

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  P + I   +L +  K    + A D ++ M   GC+ ++  +  ++          
Sbjct: 621 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 680

Query: 488 MLESLFERLDSDSNINKKELHH 509
               L   L S   +NK  L  
Sbjct: 681 ETRDLLRELCSRGVLNKNLLEE 702



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 171/361 (47%), Gaps = 32/361 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y  VL+ +  AK+WE    LF EM ++   P+  T+  L+  F + GM + AI
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 336

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+QM     + +  L + +I    K      A    + + S G  PD ++Y T++   
Sbjct: 337 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A+ +++A+ L++EM  +   P+ V+++T + +  +     +A  +  +M+E  C +++
Sbjct: 397 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 456

Query: 195 TTCNIMID---VYGQLDMAKD-----------------------------ADRLFWSMRK 222
            T N +++   V G++D A +                             A  L   M +
Sbjct: 457 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+VV++N L+  + +  L  EAI L   M       N++TYNT++    K    E+
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L+  + + G+ P+ +TYS+II +  +  +++ A  +F  ++  G+    V+Y  +++
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 636

Query: 343 A 343
           A
Sbjct: 637 A 637



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 193/451 (42%), Gaps = 11/451 (2%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  L D    RG APD Y  + LI    + G    A   L+  E+   + D+  Y+ L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                  Y +  +    + S  + PD   Y  +I          EA  L+++M  +G +P
Sbjct: 153 ---GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
             V+Y+ LL    ++  F +A+ V  EM    C  ++ T N++I+   +     DA    
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             +   G  P  VSY T+L+    A+ + +   LF  M  K    N VT++ +++ + + 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              E+A  ++++M   G   N    + +I    K G++D A      + S G   D + Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFD 393
            T++    R      AK LL E+ + N  P E    T I IL + G IE+AT +  Q  +
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   +I  +  ++  F    +  + +E+F  M      P++     +L         + 
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 506

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
           A +L +EM ++ C   + V F +L  +  +K
Sbjct: 507 AAELLAEMLQKDCA-PNVVTFNVLVSFFCQK 536



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 5/325 (1%)

Query: 8   WINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           ++N    Y  SP   +Y  VL+ + RA++WE A  L  EM ++   P+  T++T I    
Sbjct: 373 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 432

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           ++G+ + A   ++QM +     ++V Y+ L+           A+ +F  +      P+ +
Sbjct: 433 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTI 489

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y T++     A+    A  L+ EM ++   P+ V+++ L++ + +     EA+ +  +M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E  C  +L T N ++D   +   +++A  L   +   G+ P +V+Y++++ V    +  
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EAI +F ++Q   +    V YN ++    K    + A +    M + G  PN +TY T+
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGV 330
           I        L     L ++L S GV
Sbjct: 670 IEGLANEDFLKETRDLLRELCSRGV 694



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 48/326 (14%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A RL       G  P V     L+R         +A  + R  +R     +V  YNT++ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            Y +  + + A  L+  M    + P+A TY+ II      G++  A  L   +   G + 
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVF 388
             V Y  ++ A  +      A  +L E+R     PN +     I  + R GR+++A    
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR--- 266

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
                                           E   ++ S G+ PD+     VL      
Sbjct: 267 --------------------------------EFLNRLSSYGFQPDTVSYTTVLKGLCAA 294

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE---SLFERLDSDSNINKK 505
           + +E  ++L++EM E+ C+  ++V F ML  +  R    M+E    + E++         
Sbjct: 295 KRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRG--GMVERAIQVLEQMSGHGCAANT 351

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM 531
            L ++V     +  R++DA + +N M
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNM 377


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 228/509 (44%), Gaps = 47/509 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P  +AYN ++     A ++E A+ L + +R+RG  P   ++++++TC GK+   
Sbjct: 177 EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 236

Query: 71  DSAISWLQQMEQD-------------------------RVSGDL---VLYSNLIEL---- 98
           D A+S  + M++D                         R+  ++    L+ NL+ +    
Sbjct: 237 DEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 296

Query: 99  -----ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
                ARKL +   A  IF      G  PD V Y ++I+  GK     EA  L E+M + 
Sbjct: 297 DRLCKARKLEE---AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 353

Query: 154 GVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G   + V Y++L+ N ++   K  +   VF E+    C  DLT  N  +D   +    + 
Sbjct: 354 GHNANPVVYTSLIRNFFIHGRK-EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 412

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              +F  +R  G  P V SY+ L+    +A    E  ++F  M+++    +   YN ++ 
Sbjct: 413 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 472

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + KS +  KA  +++EM+ + ++P   TY  I+    K  +LD A MLF++ +S G+E+
Sbjct: 473 GFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 532

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           + VLY ++I  + +VG +  A  +L E+ +    PN     + +  L +A  I EA   F
Sbjct: 533 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 592

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           +   +     +   +  +I    R +KY      ++ M+  G  P+      +++   K+
Sbjct: 593 QSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKV 652

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQML 477
                A  L+   +  G +  D   F  L
Sbjct: 653 GNITDAYSLFERFKANGGI-PDAASFNAL 680



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 221/459 (48%), Gaps = 5/459 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y   V  +  ++R + R  Q   A  L DE++   + PD   Y+  I CFGK G  
Sbjct: 72  QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 131

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +++   +  D V Y+++I +  K     +A  +F+++++   VP   AYNTM
Sbjct: 132 DMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F++A  L+E +RE+G  P  VS++++L    +  K  EALS+F  M +   
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 251

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P + +T NI+ID+       ++A R+   M    + P++++ N ++    +A    EA  
Sbjct: 252 P-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F    ++    + VTY ++I   GK  + ++A  L ++M + G   N + Y+++I  + 
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--R 368
             G+ +    +F++L   G + D  L  T +    + G V   + +  ++R    +P  R
Sbjct: 371 IHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 430

Query: 369 ETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I I  L +AG+  E + +F      G   D   +  +++ F ++ K     E+ E+M
Sbjct: 431 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 490

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     P       +++   K+   + A  L+ E + +G
Sbjct: 491 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 529



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 214/442 (48%), Gaps = 7/442 (1%)

Query: 29  VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGD 88
           ++RA++ + A      MR+    P    Y+ LI    +    + A+  L+QM++      
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           + L++ L+    +    + A+++   +K S + PD+V YN  I+ FGKA     A     
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTTCNIMIDVYGQL 207
           E++ QG+KPD VSY++++ +  +  +  EA  +FA+M  E + P      N MI  YG  
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY-NTMIMGYGSA 198

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
              +DA +L   +R+ G  PSVVS+N++L   G+     EA+ LF +M +K+ E N  TY
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTY 257

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I +       E+A  ++ EM++  + PN +T + ++    KA KL+ A  +F+    
Sbjct: 258 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 317

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEE 383
            G   D V Y ++I    + G V  A RL  ++            T L R     GR E+
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 377

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              VF++    G   D+++    ++   +  +      +FE +RS G+ PD    +++++
Sbjct: 378 GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 437

Query: 444 SYGKLREFETADDLYSEMQEEG 465
              K  +     +++  M+++G
Sbjct: 438 GLTKAGQARETSNIFHAMKQQG 459



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 218/458 (47%), Gaps = 6/458 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY V++  +  A++ E A  L  +M++ G     + ++TL+    +EG    A
Sbjct: 40  KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 99

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++ + +++   +  D+VLY+  I+   K  +   A   F  LK+ G+ PD V+Y +MI V
Sbjct: 100 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWV 159

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  L  +M  +   P   +Y+T++  Y    +F +A  +   + E  C   
Sbjct: 160 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + N ++   G+     +A  LF  M+K   +P+  +YN ++ +        EA  +  
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILD 278

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  N++T N M+    K+ + E+A  + +    RG  P+ +TY ++I   GK G
Sbjct: 279 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 338

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
           ++D A  LF+K+  +G   +PV+Y ++I  +   G      ++  EL     +P+     
Sbjct: 339 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLN 398

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  + +AG +E+   +F      G + D+  +  +I   ++  +      +F  M+  
Sbjct: 399 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 458

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           G+  D+     V++ + K  +   A ++  EM+E+ CV
Sbjct: 459 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK-CV 495



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 36/406 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD + E A   P++   N+++  + +A++ E A+ +F+   QRG  PD  TY +LI   
Sbjct: 276 ILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-----------------ELAR------- 100
           GK+G  D A    ++M     + + V+Y++LI                 EL R       
Sbjct: 335 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDL 394

Query: 101 -----------KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
                      K  +  K   IF  ++S G +PD+ +Y+ +I+   KA   +E   +   
Sbjct: 395 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 454

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M++QG   D  +Y+ +++ + ++ K  +A  +  EM E      + T   ++D   ++D 
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +A  LF   +  GI+ +VV Y++L+  +G+     EA  +   M +K +  NV T+N+
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++    K+ E  +A    Q M+     PN  TYS +I    +  K ++A + +Q ++  G
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           +  + V Y TMI    +VG +  A  L    +    IP   +   L
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL 680



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 162/330 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A ++ +   Y  ++RN     + E  H +F E+ +RG  PD    +T + C  K G  +
Sbjct: 352 DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 411

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                 + +       D+  YS LI    K     +  +IF  +K  G   D  AYN ++
Sbjct: 412 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K+    +A  ++EEM+E+ V+P   +Y  +++   +  +  EA  +F E       
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           L++   + +ID +G++    +A  +   M K G+ P+V ++N+LL    +AE   EA+  
Sbjct: 532 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 591

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+  +   N  TY+ +I    +  ++ KA    Q+MQ +G+ PN +TY+T+I+   K
Sbjct: 592 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            G +  A  LF++ +++G   D   +  +I
Sbjct: 652 VGNITDAYSLFERFKANGGIPDAASFNALI 681



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 8/372 (2%)

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           AR+L D   A+++  RLK     P   AY  +I    +A+  + A  L+ +M+E G +  
Sbjct: 23  ARRLDDAVLAVAVMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
              ++TL+       +  +AL++  E+       D+   N+ ID +G+      A + F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            ++  G+ P  VSY +++ V  +A   GEA  LF  M+ +        YNTMI  YG + 
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E A  L++ ++ RG  P+ +++++I+   GK  K+D A  LF+ ++    E +   Y 
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 258

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDA 394
            +I      G V  A R+L E+   +  P    + I    L +A ++EEA  +F  A   
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D   +  +I+   +  +      +FEKM  AG+  +  +   ++ ++      E  
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378

Query: 455 DDLYSEMQEEGC 466
             ++ E+   GC
Sbjct: 379 HKVFKELIRRGC 390



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 135/258 (52%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  + +A Q      +F  M+Q+G A D   Y+ ++  F K G    A 
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 484

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M++  V   +  Y  +++   K+    +A  +F   KS GI  ++V Y+++I+ F
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EEM ++G+ P+  ++++LL+  V+  +  EAL  F  M E+ CP + 
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 604

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K G+ P+VV+Y T++    +     +A  LF  
Sbjct: 605 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664

Query: 255 MQRKEIEQNVVTYNTMIK 272
            +      +  ++N +I+
Sbjct: 665 FKANGGIPDAASFNALIE 682



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 142/307 (46%), Gaps = 9/307 (2%)

Query: 205 GQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           G L  A+  +R   L   M+++G +  V  + TL+R         +A+ L   ++   +E
Sbjct: 53  GALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE 112

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++V YN  I  +GK+   + A     E++ +G++P+ ++Y+++I +  KAG+L  A  L
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILAR 377
           F ++ +         Y TMI+ Y   G    A +LL  LR+   IP      + +T L +
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
             +++EA  +F       E  + S +  +I++     +      + ++M  A  FP+   
Sbjct: 233 KRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER-L 496
           + ++++   K R+ E A  ++    + GC      +  ++   G +   +    LFE+ L
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351

Query: 497 DSDSNIN 503
           D+  N N
Sbjct: 352 DAGHNAN 358



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 111/213 (52%), Gaps = 1/213 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  IL+ + E+    P+V  Y  ++  + +  + + A+ LF+E + +GI  +   YS+L
Sbjct: 482 KAYEILEEMKEKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G  D A   L++M +  ++ ++  +++L++   K  + ++A+  F  +K    
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+   Y+ +IN   + + + +A +  ++M++QG+ P+ V+Y+T+++   +     +A S
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 660

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           +F          D  + N +I+     + A +A
Sbjct: 661 LFERFKANGGIPDAASFNALIEGMSNANRAMEA 693


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 186/352 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   YN +L  + R      A  +FDEM +RG+ PD  ++S+LI    + G    A+ 
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++ME+  +  D V+Y+ LI+   +    S A+ +   + + G   D+V YNT +N   
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+F +A +L  EM E+G+ PD  +++TL+  Y ++    +AL++F  M   N   D  
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID + +      A  L+  M +  I P  +SY T+L  +  + L  EA++L   M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N+VT NT+IK Y +S +  KA   + +M + GI P++ +Y+T+I  + K   L
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANL 658

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           ++A +L  ++   G++ + + Y  ++  +   G +  A+++L ++ +    P
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 212/458 (46%), Gaps = 4/458 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S+ A N +L  ++R    +LA  ++ E+ + GI  + YT + ++    K+  F++ + 
Sbjct: 219 SVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF 278

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L  ME   V  D+V Y+ LI    +     +A  + +   S G+ P L+ YN ++    
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +  A+ ++ EM + G+ P+  +Y+TLL         +EA  +F EM+      DL 
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + + +I V  +      A   F  M + GI P  V Y  L+  +       +A+ +   M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    +VVTYNT +    K      A  L  EM  RG+ P+  T++T+I  + K G +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TA 371
           D+A  LF+ +  + ++ D V Y T+I  + + G +  AK L  ++ + + IP      T 
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +     +G + EA  +  Q  + G   ++     +I+ + R+       E   KM S G 
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            PDS     +++ Y K    E A  L +EM++ G  F+
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  YN +L  + +  +++ A  +  EM Q G+ P+  TY+TL+    +      A   
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  V  DLV +S+LI +  +     +A+  F  ++ SGIVPD V Y  +I+ F +
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  + +EM  +G   D V+Y+T LN   +   F +A  +F EM E     D  T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  Y +      A  LF +M +  + P  V+YNTL+  + +A   G A  L+  M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK+I  + ++Y T++  +  S    +A NL  +M  +GI PN +T +T+I  + ++G + 
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A     K+ S+G+  D   Y T+I  Y +   +  A  L++E+     Q N I     +
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 G+++EA  V R+  + G   D + +  +I                ++M   G  
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 433 PD 434
           PD
Sbjct: 745 PD 746



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 209/452 (46%), Gaps = 4/452 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V+  N+++  + + +++E       +M  +G+  D  TY+TLI  + +EG+ + A   L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
                  +   L+ Y+ ++    K+  Y +A  +   +   G+ P+   YNT++    + 
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA+ + +EM  +GV PD VS+S+L+ +   N    +AL  F EM       D    
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I+ID + +     DA ++   M   G    VV+YNT L    + ++F +A  LF  M  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  +  T+ T+I+ Y K    +KA NL + M    ++P+ +TY+T+I  + KAG++ R
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  L+  +    +  D + Y T++  +   GL+  A  L  ++ +    PN +   T I 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              R+G + +A     +    G + D   +  +I+ + +         +  +M   G   
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     L+LN +    + + A+ +  +M E G
Sbjct: 676 NIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 6/299 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P    Y +++    R      A  + DEM  RG   D  TY+T +    K+ MF
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M +  +  D   ++ LI    K  +  KA+++F  +  + + PD V YNT+
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA     A+ L ++M  + + PD +SY T+LN +  +    EAL++  +M E   
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGE 247
             +L TCN +I  Y +   + D  + +  + KM   GI P   SYNTL+  Y +     +
Sbjct: 604 RPNLVTCNTLIKGYCR---SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           A  L   M+++ ++ N++TYN ++  +    + ++A  ++++M   GI P+  TYS++I
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 225/495 (45%), Gaps = 42/495 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P  +AYN ++     A Q+E A+ L D++++RG  P   ++++++TC GK+   
Sbjct: 314 ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKV 373

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++  + M++D    +   Y+ +I++        +A  I   ++ +G+ P+L+  N M
Sbjct: 374 DEALTLFEAMKKD-AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL------------------------ 166
           ++   KAK F+ A  + E   ++G  P++V+Y +L+                        
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492

Query: 167 ------------NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
                       N ++   K  +   +F EMN   C  DLT  N  +D   +    +   
Sbjct: 493 NANPVVYTSLIRNFFMHGRK-EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGR 551

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            +F  ++  G  P V SY+ L+    +A    E   +F  M+++    +   YN ++  +
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGF 611

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS + +KA  +++EM+ + + P   TY +II    K  +LD A MLF++ +S G+E++ 
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           ++Y ++I  + +VG +  A  +L E+ +    PN     + +  L +A  I EA   F+ 
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             +     +   +  +I    R +KY      +++M+  G  P+      ++    K+  
Sbjct: 732 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGN 791

Query: 451 FETADDLYSEMQEEG 465
              A  L+   +  G
Sbjct: 792 ITDACSLFERFKANG 806



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 227/475 (47%), Gaps = 5/475 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y   V  +  ++R + R  + E A  L DE++   + PD   Y+  I CFGK G  
Sbjct: 209 QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 268

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +++   +  D V Y+++I +  K    S+A  +F ++++   VP   AYNTM
Sbjct: 269 DMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F+ A  L+++++E+G  P  VS++++L    +  K  EAL++F  M +   
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE 388

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P + +T NI+ID+       ++A  +   M   G+ P++++ N ++    +A+ F  A  
Sbjct: 389 P-NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F    ++    N VTY ++I   GK    + A  L + M + G   N + Y+++I  + 
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--R 368
             G+ +    +F+++   G + D  L  T +    + G V   + +  +++    +P  R
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 369 ETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I I  L +AG+  E + +F      G   D   +  +++ F ++ K     EV E+M
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +     P       +++   K+   + A  L+ E + +G   +  V+  ++  +G
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 10/427 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A   P++   N+++  + +AK++E A+ +F+   QRG  P+  TY +LI   GK+G  
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    + M     + + V+Y++LI              IF  +   G  PDL   NT 
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R + E+++  G  PD  SYS L++   +  +  E  S+F  M +   
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            LD    N ++D +   G+LD A +   +   M+   + P+V +Y +++    + +   E
Sbjct: 598 ALDARAYNAVVDGFCKSGKLDKAYE---VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDE 654

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF   + K IE NV+ Y+++I  +GK    ++A  +++EM  +G+ PN  T+++++ 
Sbjct: 655 AYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 714

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
              KA +++ A + FQ ++      +   Y  +I    RV     A     E+++    P
Sbjct: 715 ALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVP 774

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +   T I  LA+ G I +A  +F +    G   D + F  +IE  S   +      VF
Sbjct: 775 NVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVF 834

Query: 424 EKMRSAG 430
           E+ R  G
Sbjct: 835 EETRLKG 841



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 215/453 (47%), Gaps = 5/453 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY V++  +  A+Q E A  L  +M++ G       ++TL+    +EG  + A
Sbjct: 177 KFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGA 236

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++ + +++   +  D+VLY+  I+   K  +   A   F  LKS G+ PD V+Y +MI V
Sbjct: 237 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWV 296

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  L  +M  +   P   +Y+T++  Y    +F  A  +  ++ E  C   
Sbjct: 297 LCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPS 356

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + N ++   G+     +A  LF +M+K   +P+  +YN ++ +   A    EA  +  
Sbjct: 357 VVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRD 415

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+   +  N++T N M+    K+ + E A  + +    RG  PN++TY ++I   GK G
Sbjct: 416 EMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKG 475

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            +D A  LF+ +  +G   +PV+Y ++I  +   G      ++  E+     QP+     
Sbjct: 476 NVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLN 535

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  + +AG +E+   +F      G + D+  +  +I   ++  +      +F  M+  
Sbjct: 536 TYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQ 595

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           G+  D+     V++ + K  + + A ++  EM+
Sbjct: 596 GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK 628



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 159/307 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  + +A Q      +F  M+Q+G A D   Y+ ++  F K G  D A 
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAY 621

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+  RV   +  Y ++I+   K+    +A  +F   KS GI  +++ Y+++I+ F
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 681

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EEM ++G+ P+  ++++L++  V+  +  EAL  F  M E+ C  + 
Sbjct: 682 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K G+ P+VV+Y T++    +     +A  LF  
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  ++N +I+    +    +A ++ +E + +G   N     +++    KA  
Sbjct: 802 FKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAEC 861

Query: 315 LDRAAML 321
           L++AA++
Sbjct: 862 LEQAAVV 868



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/531 (21%), Positives = 230/531 (43%), Gaps = 51/531 (9%)

Query: 18  SVFAYNV-------VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           SV  Y V       ++  ++R ++ + A  +   MR+    P    Y+ LI    +    
Sbjct: 139 SVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQP 198

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  L+QM++      + L++ L+    +      A+++   +K S + PD+V YN  
Sbjct: 199 ERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVC 258

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ FGKA     A     E++ QG+KPD VSY++++ +  +  +  EA  +F +M     
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM----- 313

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                + +R           P   +YNT++  YG A  F  A  
Sbjct: 314 ---------------------ETERAV---------PCAYAYNTMIMGYGSAGQFENAYK 343

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   ++ +    +VV++N+++   GK  + ++A  L + M+ +  EPN+ TY+ II +  
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLC 402

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
            AGK++ A M+  ++  +G+  + +    M+    +      A  +     Q    PN++
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I  L + G +++A  +F    D G   +  V+  +I  F  + +  +  ++F++M
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              G  PD  ++   ++   K  + E    ++ +++  G  F   V    + ++G  K  
Sbjct: 523 NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYG--FLPDVRSYSILIHGLTKAG 580

Query: 487 NMLE--SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
              E  S+F  +           ++ V   + ++ +L+ A  ++  M  +R
Sbjct: 581 QARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 200/448 (44%), Gaps = 14/448 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLV---AYNTMINVFGKAKLFKEARLLIEEMR 151
           +I + R L + S A   F  L SS   P  +   AYN ++          E   ++EEM 
Sbjct: 84  VIPVLRTLRNPSLAAPFF--LASSAASPHPLPADAYNAVLPFLSHDLAAMEK--VLEEMS 139

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
             G      + + L++  V   +  +A  V A M  +      +   ++I    +    +
Sbjct: 140 VLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPE 199

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A  L   M+++G +  V  + TL+R          A+ L   ++   +E ++V YN  I
Sbjct: 200 RALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCI 259

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             +GK+   + A     E++++G++P+ ++Y+++I +  KAG+L  A  LF ++ +    
Sbjct: 260 DCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWV 387
                Y TMI+ Y   G   +A +LL +L++   IP      + +T L +  +++EA  +
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +A       + S +  +I++     K      + ++M  AG FP+   + ++++   K
Sbjct: 380 F-EAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER-LDSDSNINKKE 506
            ++FE A +++    + GC  +   +  ++   G + + +    LFE  LD+  N N   
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNKR 534
              ++   +    R  D  +I   MN+R
Sbjct: 499 YTSLIRNFFMHG-RKEDGHKIFKEMNRR 525



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 118/235 (50%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+V  Y  ++  + +  + + A+ LF+E + +GI  +   YS+LI  FGK G  D A
Sbjct: 631 RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              L++M +  ++ ++  +++L++   K  + ++A+  F  +K     P+   Y+ +IN 
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILING 750

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             + + + +A +  +EM++QG+ P+ V+Y+T++    +     +A S+F          D
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
             + N +I+     + A +A  +F   R  G   +V +  +LL    +AE   +A
Sbjct: 811 AASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 71/136 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E + SP+ + Y++++  + R +++  A   + EM+++G+ P+  TY+T+I    K G  
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S  ++ + +  + D   ++ LIE     +   +A  +F   +  G   ++ A  ++
Sbjct: 793 TDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISL 852

Query: 131 INVFGKAKLFKEARLL 146
           ++   KA+  ++A ++
Sbjct: 853 LDALNKAECLEQAAVV 868


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 4/417 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VFAYN ++    R  Q + A  L   M    +APD YTY+ +I      G    A+S L 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M        +V Y+ L+E   K + + +A+ +   +++ G  P++V YN +IN   +  
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              +AR  +  +   G +PDTVSY+T+L       ++ +   +FAEM E NC  +  T +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           +++  + +  M + A ++   M   G   +    N ++    +     +A      M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               + ++Y T++K   ++   E A  L++EM  +   PN +T++T I I  + G +++A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILAR 377
            ML +++   G E++ V Y  ++  +   G V  A  L + +  +PNTI   T +T L  
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           A R++ A  +  +        ++  F  ++  F +       IE+ E+M   G  P+
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 219/530 (41%), Gaps = 36/530 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + Y  ++R +    +   A  L D+M  RG  P   TY+ L+    K   F  A+ 
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M     + ++V Y+ +I    +      A    +RL S G  PD V+Y T++    
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            AK +++   L  EM E+   P+ V++  L+  +        A+ V  +M+   C  + T
Sbjct: 262 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 321

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CNI+I+   +     DA +   +M   G  P  +SY T+L+    AE + +A  L + M
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE------------------- 296
            RK    N VT+NT I I  +    E+AT L+++M   G E                   
Sbjct: 382 VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 297 -------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                        PN ITY+T++     A +LD AA L  ++       + V +  ++  
Sbjct: 442 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + + GL+  A  L+ ++ +    PN I   T +  +      EEA  +       G   D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPD 561

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I  +  +I + SR  +    I++F  ++  G  P + I   +L +  K    + A D ++
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
            M   GC+ ++  +  ++              L   L S   +NK  L  
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEE 671



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 11/477 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  + S    N  LR ++       A  L D    RG APD Y  + LI    + G   
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L+  E+   + D+  Y+ L+        Y +  +    + S  + PD   Y  +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVA---GYCRYGQLDAARRLIASMPVAPDAYTYTPII 152

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                     EA  L+++M  +G +P  V+Y+ LL    ++  F +A+ V  EM    C 
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N++I+   +     DA      +   G  P  VSY T+L+    A+ + +   L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  K    N VT++ +++ + +    E+A  ++++M   G   N    + +I    K
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-- 369
            G++D A      + S G   D + Y T++    R      AK LL E+ + N  P E  
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 370 --TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL + G IE+AT +  Q  + G   +I  +  ++  F    +  + +E+F  M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
                P++     +L         + A +L +EM ++ C   + V F +L  +  +K
Sbjct: 453 CK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA-PNVVTFNVLVSFFCQK 505



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 170/361 (47%), Gaps = 32/361 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y  VL+ +  AK+WE    LF EM ++   P+  T+  L+  F + GM + AI
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+QM     + +  L + +I    K      A    + + S G  PD ++Y T++   
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A+ +++A+ L++EM  +   P+ V+++T + +  +     +A  +  +M+E  C +++
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 195 TTCNIMID---VYGQLDMAKD-----------------------------ADRLFWSMRK 222
            T N +++   V G++D A +                             A  L   M +
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+VV++N L+  + +  L  EAI L   M       N++TYNT++         E+
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L+  + + G+ P+ +TYS+II +  +  +++ A  +F  ++  G+    V+Y  +++
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 343 A 343
           A
Sbjct: 606 A 606



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 129/331 (38%), Gaps = 49/331 (14%)

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           D+A +A RL       G  P V     L+R         +A  + R  +R     +V  Y
Sbjct: 58  DLA-EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAY 116

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT++  Y +  + + A  L+  M    + P+A TY+ II      G++  A  L   +  
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
            G +   V Y  ++ A  +      A  +L E+R     PN +     I  + R GR+++
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A                                    E   ++ S G+ PD+     VL 
Sbjct: 234 AR-----------------------------------EFLNRLSSYGFQPDTVSYTTVLK 258

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE---SLFERLDSDS 500
                + +E  ++L++EM E+ C+  ++V F ML  +  R    M+E    + E++    
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRG--GMVERAIQVLEQMSGHG 315

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRM 531
                 L ++V     +  R++DA + +N M
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNM 346


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 223/459 (48%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+V   N+++  + ++++ + A  +F+EM  +   PD  T+ +LI   GK G  
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++M       + ++Y++LI+             I+  + +    PDL   NT 
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA   ++ R + EE++ +   PD  SYS L++  ++     E   +F  M E  C
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD    NI+ID + +      A +L   M+  G +P+VV+Y +++    + +   EA  
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF   + K IE NVV Y+++I  +GK    ++A  +++E+  +G+ PN  T+++++    
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           KA +++ A + FQ ++      + V Y  +I    +V     A     E+++    P+TI
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I+ LA+AG I EA  +F +    G V D + +  MIE  S   +  +   +FE+ 
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           R  G    +    ++L++  K    E A  + + ++E G
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 11/461 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y P+V  +  ++R   +  + + A  L DEM+   +  D   Y+  I  FGK G  
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  ++E + +  D V Y+++I +  K +   +A+ +F  L+ +  VP   AYNTM
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A  F EA  L+E  R +G  P  ++Y+ +L    +  K  EAL VF EM +   
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           P +L+T NI+ID+    G+LD A +   L  SM+K G+ P+V + N ++    +++   E
Sbjct: 375 P-NLSTYNILIDMLCRAGKLDTAFE---LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  M  K    + +T+ ++I   GK    + A  + ++M +     N+I Y+++I 
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +   G+ +    +++ + +     D  L  T +    + G     + +  E++    +P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550

Query: 368 RETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
              + +I    L +AG   E   +F    + G V D   +  +I+ F +  K     ++ 
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           E+M++ G+ P       V++   K+   + A  L+ E + +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/565 (22%), Positives = 239/565 (42%), Gaps = 79/565 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  P  +AYN ++     A +++ A+ L +  R +G  P    Y+ ++TC  K G  
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   ++M++D  + +L  Y+ LI++  +      A  +   ++ +G+ P++   N M
Sbjct: 360 DEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN----------------------- 167
           ++   K++   EA  + EEM  +   PD +++ +L++                       
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478

Query: 168 -----LYVE------NHKFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
                +Y        NH   E    ++ +M   NC  DL   N  +D   +    +    
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           +F  ++     P   SY+ L+    +A    E   LF  M+ +    +   YN +I  + 
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  +  KA  L++EM+ +G EP  +TY ++I    K  +LD A MLF++ +S  +E++ V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
           +Y ++I  + +VG +  A  +L EL Q    PN     + +  L +A  I EA       
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA------- 711

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
                                       +  F+ M+     P+     +++N   K+R+F
Sbjct: 712 ----------------------------LVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHH 509
             A   + EMQ++G   S   +  M+S  G  K  N+ E  +LF+R  ++  +     ++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMIS--GLAKAGNIAEAGALFDRFKANGGVPDSACYN 801

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
            +       NR  DA  +     +R
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRR 826



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 209/456 (45%), Gaps = 5/456 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P+  AY  ++         ++   LF +M++ G  P  + ++TLI  F KEG  DSA
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +S L +M+   +  D+VLY+  I+   K+     A   F  ++++G+ PD V Y +MI V
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  + E + +    P T +Y+T++  Y    KF EA S+            
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N ++    ++    +A ++F  M+K    P++ +YN L+ +   A     A  L  
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRD 401

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQ+  +  NV T N M+    KS + ++A  + +EM  +   P+ IT+ ++I   GK G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
           ++D A  +++K+  S    + ++Y ++I  +   G      ++  ++   N  P      
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  + +AG  E+   +F +      V D   +  +I    +        E+F  M+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D+    +V++ + K  +   A  L  EM+ +G
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/555 (21%), Positives = 239/555 (43%), Gaps = 56/555 (10%)

Query: 1   RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R+   LD I  E   A + PSV     ++   ++A +    + +   MR+    P    Y
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           +TLI  F      D  ++  QQM++      + L++ LI    K      A+S+   +KS
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           S +  D+V YN  I+ FGK      A     E+   G+KPD V+Y++++ +  + ++  E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A+ +F  + E N                               R++   P   +YNT++ 
Sbjct: 292 AVEMFEHL-EKN-------------------------------RRV---PCTYAYNTMIM 316

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            YG A  F EA  L    + K    +V+ YN ++    K  + ++A  + +EM+ +   P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAP 375

Query: 298 NAITYSTIIAIWGKAGKLDRA---------AMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           N  TY+ +I +  +AGKLD A         A LF  +R+  + +D +     +       
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE----- 430

Query: 349 LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             A  + + +++  P+ I   + I  L + GR+++A  V+ +  D+    +  V+  +I+
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F  + +  +  ++++ M +    PD  ++   ++   K  E E    ++ E++    V 
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV- 549

Query: 469 SDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
            D   + +L     +  F N    LF  +     +     +++V   + +  ++N A ++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609

Query: 528 MNRMNKRRTFNSSLV 542
           +  M K + F  ++V
Sbjct: 610 LEEM-KTKGFEPTVV 623



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 160/358 (44%), Gaps = 37/358 (10%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI----- 61
           D IN+    SP +   N  +  + +A + E    +F+E++ R   PD  +YS LI     
Sbjct: 507 DMINQNC--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564

Query: 62  -----------------TC-------------FGKEGMFDSAISWLQQMEQDRVSGDLVL 91
                             C             F K G  + A   L++M+       +V 
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y ++I+   K+    +A  +F   KS  I  ++V Y+++I+ FGK     EA L++EE+ 
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++G+ P+  ++++LL+  V+  +  EAL  F  M E+ C  +  T  I+I+   ++    
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A   +  M+K G+ PS +SY T++    +A    EA  LF   +      +   YN MI
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +          A +L +E + RG+  +  T   ++    K   L++AA++   LR +G
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 44/417 (10%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL------ARKLSDYSKAI 109
           +Y++L+    +   FD+    L +M    V+G     +  IE+      A KL +    +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMS---VAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +  + K     P   AY T+I  F           L ++M+E G +P    ++TL+  +
Sbjct: 157 QMMRKFK---FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            +  +   ALS+  EM   +   D+   N+ ID +G++     A + F  +   G+ P  
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y +++ V  +A    EA+ +F  +++         YNTMI  YG + + ++A +L++ 
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            + +G  P+ I Y+ I+    K GK+D A  +F++++                       
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA------------------- 374

Query: 350 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
                        PN       I +L RAG+++ A  +      AG   ++     M++ 
Sbjct: 375 -------------PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             +++K      +FE+M      PD      +++  GK+   + A  +Y +M +  C
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 43/306 (14%)

Query: 203 VYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLL-------------RVYGEAELF 245
           V G L   KD +R      W  R+  +     SYN+LL             ++ GE  + 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127

Query: 246 G----------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G                      E   + ++M++ +       Y T+I  +      +  
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L Q+MQ  G EP    ++T+I  + K G++D A  L  +++SS ++ D VLY   I +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247

Query: 344 YERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + +VG V  A +  HE+     +P+ +   + I +L +A R++EA  +F        V  
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              +  MI  +    K+     + E+ R+ G  P       +L    K+ + + A  ++ 
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367

Query: 460 EMQEEG 465
           EM+++ 
Sbjct: 368 EMKKDA 373


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 182/379 (48%), Gaps = 13/379 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V A   ++R   R+ +   A  + + +   G  PD  TY+ LI  + K G  D A+  
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
           L++M    V+ D+V Y+ ++   R L D  K   A+ +  R       PD++ Y  +I  
Sbjct: 200 LERMS---VAPDVVTYNTIL---RSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEA 253

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                   +A  L++EMR++G KPD V+Y+ L+N   +  +  EA+     M    C  +
Sbjct: 254 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++          DA+RL   M + G  PSVV++N L+       L G AI +  
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +     N ++YN ++  + +  + ++A   ++ M +RG  P+ +TY+T++    K G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K D A  +  +L S G     + Y T+I    +VG   +A  LL E+R    +P+ I   
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493

Query: 370 TAITILARAGRIEEATWVF 388
           T +  L   G+++EA  +F
Sbjct: 494 TLLRGLGCEGKVDEAIKIF 512



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 170/352 (48%), Gaps = 3/352 (0%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I E +   P V  YNV++    ++ + + A  + + M    +APD  TY+T++      G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG 223

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+  L +  Q     D++ Y+ LIE     S   +A+ +   ++  G  PD+V YN
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +IN   K     EA   +  M   G +P+ ++++ +L       ++++A  + A+M   
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C   + T NI+I+   +  +   A  +   M K G  P+ +SYN LL  + + +    A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           I    +M  +    ++VTYNT++    K  + + A  ++ ++ ++G  P  ITY+T+I  
Sbjct: 404 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDG 463

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             K GK + AA L +++R  G++ D + Y T++      G V  A ++ H++
Sbjct: 464 LTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 151/325 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++           A  L DEMR++G  PD  TY+ LI    KEG  D AI +
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 301

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M       +++ ++ ++        +  A  + + +   G  P +V +N +IN   +
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +L   A  ++E+M + G  P+++SY+ LL+ + +  K   A+     M    C  D+ T
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +   +   G  P +++YNT++    +      A  L   M+
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK ++ +++TY+T+++  G   + ++A  +  +M+   I+P+A+TY+ I+    KA +  
Sbjct: 482 RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 541

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI 341
           RA      +   G +     Y  +I
Sbjct: 542 RAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 193/486 (39%), Gaps = 77/486 (15%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           FA N+ LR ++R  + E      + M  +G  PD    ++LI  F + G           
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSG----------- 156

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
                                      KA  I   L++SG VPD++ YN +I  + K+  
Sbjct: 157 ------------------------KTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGE 192

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A  ++E M    V PD V+Y+T+L    ++ K  EA+ V     +  C  D+ T  I
Sbjct: 193 IDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 249

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL-------------LRVYGEAELFG 246
           +I+          A +L   MRK G  P VV+YN L             ++      L+G
Sbjct: 250 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309

Query: 247 ----------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
                                 +A  L   M RK    +VVT+N +I    +     +A 
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +++++M   G  PN+++Y+ ++  + +  K+DRA    + + S G   D V Y T++ A 
Sbjct: 370 DVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 429

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G    A  +L++L      P  I   T I  L + G+ E A  +  +    G   DI
Sbjct: 430 CKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDI 489

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  ++       K    I++F  M      P +     ++    K ++   A D  + 
Sbjct: 490 ITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 549

Query: 461 MQEEGC 466
           M E+GC
Sbjct: 550 MVEKGC 555



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 8/289 (2%)

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+  C  +I  + +    + A R+   +   G  P V++YN L+  Y ++   GE     
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKS---GEIDKAL 197

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           ++++R  +  +VVTYNT+++    S + ++A  ++     R   P+ ITY+ +I      
Sbjct: 198 QVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
             + +A  L  ++R  G + D V Y  +I    + G +  A + L+ +     QPN I  
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              +  +   GR  +A  +       G    +  F  +I    R +     I+V EKM  
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G  P+S     +L+ + + ++ + A +    M   GC + D V +  L
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC-YPDIVTYNTL 425



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 23/261 (8%)

Query: 243 ELFGEAIHLFRLMQRKEIEQ---------------NVVTYNTMIKIYGKSLEHEKATNLM 287
           E F   IHL +L++  E+E+               +V+   ++I+ + +S +  KAT +M
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           + ++N G  P+ ITY+ +I  + K+G++D+A  + +++    V  D V Y T++ +    
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDS 222

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVF 403
           G +  A  +L    Q    P     TIL  A      + +A  +  +    G   D+  +
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I    +  +    I+    M   G  P+     ++L S      +  A+ L ++M  
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 464 EGCVFSDQVHFQMLSLYGARK 484
           +GC  S  V F +L  +  RK
Sbjct: 343 KGCSPS-VVTFNILINFLCRK 362


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 199/405 (49%), Gaps = 5/405 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PSV AYN VL   L       A   FD M   G+AP+ YTY+ LI      G    A+
Sbjct: 112 YVPSVLAYNAVLL-ALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L+ M       ++V Y+ L+    +  +   A  +   +   G+ P+LV +N+M+N  
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA   ++AR + +EM  +G+ PD VSY+TL+  Y +     EALSVFAEM +     D+
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +I V  +    + A  L   MR+ G+  + V++  L+  + +     +A+   R 
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++  I+ +VV YN +I  Y      ++A  L+ EM+ +G++P+ +TYSTII+ + K   
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHA--KRLLHELRQPNTIPRET 370
              A  L Q++   GV  D + Y ++I  +  E+    AH   K ++    QP+     +
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            I    + G +E A  +  +   AG + D+  +  +I   S++ +
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 200/471 (42%), Gaps = 54/471 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +N ++  + +A + E A  +FDEM + G+APD  +Y+TL+  + K G    A+S 
Sbjct: 218 PNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSV 277

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG----------------- 119
             +M Q  +  D+V +++LI +  K  +   A+++  +++  G                 
Sbjct: 278 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK 337

Query: 120 ------------------IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                             I P +V YN +IN +       EAR L+ EM  +G+KPD V+
Sbjct: 338 KGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 397

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YST+++ Y +N     A  +  +M E     D  T + +I V  +     DA  LF +M 
Sbjct: 398 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI 457

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K+G+ P   +Y +L+  + +      A+ L   M +  +  +VVTY+ +I    KS    
Sbjct: 458 KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 517

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKA---------------GKLDRAAMLFQKLR 326
           +A  L+ ++ +    P    Y  ++    KA               G ++ A  ++Q + 
Sbjct: 518 EAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 577

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIE 382
                +D  +Y  +I  + R G V  A     ++ Q    P  T+   L R     G + 
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVV 637

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           EA  V +Q  +   + D      +I+L         V++V   M   G  P
Sbjct: 638 EADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 158/321 (49%), Gaps = 5/321 (1%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G VP ++AYN ++     A L   AR   + M   GV P+  +Y+ L+          EA
Sbjct: 111 GYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           LS+  +M    C  ++ T N ++  + +      A+RL   M   G+ P++V++N+++  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +A    +A  +F  M R+ +  + V+YNT++  Y K+    +A ++  EM  +GI P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +T++++I +  KAG L+ A  L +++R  G++++ V +  +I  + + G +  A   + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            +RQ    P+ +     I      GR++EA  +  +    G   D+  +  +I  + +N 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 415 KYANVIEVFEKMRSAGYFPDS 435
              +  E+ ++M   G  PD+
Sbjct: 410 DTHSAFELNQQMLEKGVLPDA 430



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A R F SM   G+ P+V +YN L+R         EA+ + R M+      NVVTYNT++ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + ++ E + A  L+  M + G++PN +T+++++    KAGK++ A  +F ++   G+  
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D V Y T++  Y + G    A  +  E+ Q    P+ +   + I ++ +AG +E A  + 
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           RQ  + G   +   F  +I+ F +     + +     MR     P       ++N Y  +
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373

Query: 449 REFETADDLYSEMQEEG 465
              + A +L  EM+ +G
Sbjct: 374 GRMDEARELLHEMEAKG 390



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R  PSV  YN ++       + + A  L  EM  +G+ PD  TYST+I+ + K     
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA    QQM +  V  D + YS+LI +  +    S A  +F  +   G+ PD   Y ++I
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K    + A  L ++M + GV PD V+YS L+N   ++ + +EA  +  ++     P
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE-P 531

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           +   T                 D L    RK  +     S   LL+ +    L  EA  +
Sbjct: 532 IPANT---------------KYDALMHCCRKAELK----SVLALLKGFCMKGLMNEADKV 572

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           ++ M  +    +   Y+ +I  + ++    KA +  ++M  RG  PN+ +  ++I    +
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632

Query: 312 AGKLDRAAMLFQKL 325
            G +  A  + Q+L
Sbjct: 633 NGMVVEADQVIQQL 646



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 7/208 (3%)

Query: 263 NVVTYNT-MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           +V+ YN  ++ +   SL    A      M + G+ PN  TY+ +I      G    A  +
Sbjct: 115 SVLAYNAVLLALSDASLT--SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
            + +R +G   + V Y T++ A+ R G V  A+RL+  +     +PN +   + +  + +
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           AG++E+A  VF +    G   D   +  ++  + +       + VF +M   G  PD   
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
              +++   K    E A  L  +M+E G
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERG 320



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 6/188 (3%)

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  P+ + Y+ ++     A  L  A   F  + S GV  +   Y  +I A    G    A
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             +L ++R     PN +   T +    RAG ++ A  +     D G   ++  F  M+  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             +  K  +  +VF++M   G  PD      ++  Y K      A  +++EM ++G +  
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG-IMP 288

Query: 470 DQVHFQML 477
           D V F  L
Sbjct: 289 DVVTFTSL 296


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 186/352 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   YN +L  + R      A  +FDEM +RG+ PD  ++S+LI    + G    A+ 
Sbjct: 359 TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALM 418

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++ME+  +  D V+Y+ LI+   +    S A+ +   + + G   D+V YNT +N   
Sbjct: 419 HFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC 478

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+F +A +L  EM E+G+ PD  +++TL+  Y ++    +AL++F  M   N   D  
Sbjct: 479 KKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID + +      A  L+  M +  I P  +SY T+L  +  + L  EA++L   M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N+VT NT+IK Y +S +  KA   + +M + GI P++ +Y+T+I  + K   L
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANL 658

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           ++A +L  ++   G++ + + Y  ++  +   G +  A+++L ++ +    P
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 212/458 (46%), Gaps = 4/458 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S+ A N +L  ++R    +LA  ++ E+ + GI  + YT + ++    K+  F++ + 
Sbjct: 219 SVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF 278

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L  ME   V  D+V Y+ LI    +     +A  + +   S G+ P L+ YN ++    
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +  A+ ++ EM + G+ P+  +Y+TLL         +EA  +F EM+      DL 
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + + +I V  +      A   F  M + GI P  V Y  L+  +       +A+ +   M
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    +VVTYNT +    K      A  L  EM  RG+ P+  T++T+I  + K G +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TA 371
           D+A  LF+ +  + ++ D V Y T+I  + + G +  AK L  ++ + + IP      T 
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +     +G + EA  +  Q  + G   ++     +I+ + R+       E   KM S G 
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            PDS     +++ Y K    E A  L +EM++ G  F+
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  YN +L  + +  +++ A  +  EM Q G+ P+  TY+TL+    +      A   
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  V  DLV +S+LI +  +     +A+  F  ++ SGIVPD V Y  +I+ F +
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  + +EM  +G   D V+Y+T LN   +   F +A  +F EM E     D  T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  Y +      A  LF +M +  + P  V+YNTL+  + +A   G A  L+  M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK+I  + ++Y T++  +  S    +A NL  +M  +GI PN +T +T+I  + ++G + 
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A     K+ S+G+  D   Y T+I  Y +   +  A  L++E+     Q N I     +
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 G+++EA  V R+  + G   D + +  +I                ++M   G  
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 433 PD 434
           PD
Sbjct: 745 PD 746



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 209/452 (46%), Gaps = 4/452 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V+  N+++  + + +++E       +M  +G+  D  TY+TLI  + +EG+ + A   L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
                  +   L+ Y+ ++    K+  Y +A  +   +   G+ P+   YNT++    + 
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA+ + +EM  +GV PD VS+S+L+ +   N    +AL  F EM       D    
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I+ID + +     DA ++   M   G    VV+YNT L    + ++F +A  LF  M  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  +  T+ T+I+ Y K    +KA NL + M    ++P+ +TY+T+I  + KAG++ R
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  L+  +    +  D + Y T++  +   GL+  A  L  ++ +    PN +   T I 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              R+G + +A     +    G + D   +  +I+ + +         +  +M   G   
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     L+LN +    + + A+ +  +M E G
Sbjct: 676 NIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 6/299 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P    Y +++    R      A  + DEM  RG   D  TY+T +    K+ MF
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M +  +  D   ++ LI    K  +  KA+++F  +  + + PD V YNT+
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA     A+ L ++M  + + PD +SY T+LN +  +    EAL++  +M E   
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGE 247
             +L TCN +I  Y +   + D  + +  + KM   GI P   SYNTL+  Y +     +
Sbjct: 604 RPNLVTCNTLIKGYCR---SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           A  L   M+++ ++ N++TYN ++  +    + ++A  ++++M   GI P+  TYS++I
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719


>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 743

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 238/519 (45%), Gaps = 6/519 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I+D + EE+  S  +  YN ++    +A  ++ A  L ++MR+  + PD  TYS +I   
Sbjct: 173 IMDTV-EESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGAC 231

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G    A+SW  +M++  +      ++ LI L  K  D    + + + +K  G  PD 
Sbjct: 232 GRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDW 291

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              +  +  + +A L K+   ++  +R+ G   +T SY TLL++Y++ +   EAL +F  
Sbjct: 292 QTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLA 351

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +         C  +I  +   +M   A  +F  M+  G+ PS+ S  T++ VYG    
Sbjct: 352 MRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGD 411

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  LF  ++      ++  YN MI +Y +    E A  + + M+   + P+A TY +
Sbjct: 412 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 471

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++ +  K     +A  ++ +LR+S VE+D V+   ++    +   +    +L  E+    
Sbjct: 472 MLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVG 531

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P      ++     +AG  E A    + A   G    IS F  ++  +++ + + N+ 
Sbjct: 532 YVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKIS-FSTLVHAYAKKQDFPNME 590

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
               +M++AGY         +L++YGK  + E   D+ + M+  G       +  +++ Y
Sbjct: 591 AALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTY 650

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           G       +E+LF  +  +  +  +  ++ +   Y  A+
Sbjct: 651 GKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFAD 689



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 240/523 (45%), Gaps = 15/523 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V AY+V++    R   +E +  +  EMR+  + PDR  +   +  +G++G  + A   +
Sbjct: 115 AVVAYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNWLKQLNTYGQQGKIEEAERIM 174

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             +E+  +S  LV Y+++I    K   Y KA  +  +++   +VPD + Y+ MI   G+ 
Sbjct: 175 DTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRV 234

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA     EM+   +KP + +++TL++LY +       + V  EM +  C  D  T 
Sbjct: 235 GKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDWQTL 294

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +  +  Y +  + KD   +   +R  G      SY TLL VY +  L  EA+ +F  M++
Sbjct: 295 DAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRK 354

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             +        ++I  +  +   + A ++ +EMQ  G+ P+  +  T+I ++G  G +  
Sbjct: 355 AGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKE 414

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  LF  LRSS   +D   Y  MI  Y R  +   A ++   + + + +P       + R
Sbjct: 415 AEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLR 474

Query: 378 -------AGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                    + EE  W  R +    +V+ D  +  C++   ++      + ++F++M   
Sbjct: 475 MCQKCNLPAQAEEIYWRLRNS----DVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDV 530

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNM 488
           GY P +    ++++ YGK    E A       Q+ G   +D++ F  L   Y  ++DF  
Sbjct: 531 GYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGS--ADKISFSTLVHAYAKKQDFPN 588

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +E+    + +    +  E ++ +   Y +A ++   S ++ RM
Sbjct: 589 MEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARM 631



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 222/476 (46%), Gaps = 6/476 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           + E  +   +V+AYN++ + +    +W ++   L  +M++    PD+YT++TLI    K 
Sbjct: 1   MRETGKTRGNVYAYNIMFKILGARHEWSKIDDFLGGKMQEDECEPDQYTFNTLIMSASKA 60

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
              D A    Q M Q  V   ++ YS ++ L ++    ++A S+FS + +SG V  +VAY
Sbjct: 61  NYVDYATITFQLMLQTGVLPSILTYSMMLLLYQRHRKVAEAESVFSHMLNSG-VQAVVAY 119

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           + MI ++ +  LF+++  ++ EMR   V PD  ++   LN Y +  K  EA  +   + E
Sbjct: 120 SVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVEE 179

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
               L L   N MI  YG+  +   A RL   MR+  + P  ++Y+ ++   G      E
Sbjct: 180 SGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKE 239

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+  F  M+R EI+     +NT+I +YGK+ + E    ++ EM+  G +P+  T    + 
Sbjct: 240 ALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVR 299

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + +AG +     +   LR +G   +   Y T++  Y +  L   A R+   +R+    P
Sbjct: 300 AYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAP 359

Query: 368 RE----TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +E    + I     A   + A  VF++   AG    +     MI ++  N        +F
Sbjct: 360 KEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLF 419

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
             +RS+    D     +++N Y +    E A  +Y  M+E+  +     +  ML +
Sbjct: 420 HSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRM 475



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 180/424 (42%), Gaps = 76/424 (17%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+ E         +Y  +L   L+    + A  +F  MR+ G+AP  Y   +LI  F   
Sbjct: 322 WVEETG-------SYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDA 374

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
            MFD A S  ++M+   V+  L     +I +     D  +A  +F  L+SS    D+ AY
Sbjct: 375 EMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAY 434

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF----- 182
           N MINV+ +  + + A  + + M E  + PD  +Y ++L +  + +   +A  ++     
Sbjct: 435 NVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRN 494

Query: 183 --AEMNEVNCPLDLTTC----------------------------NIMIDVYGQLDMAK- 211
              E++EV C   L TC                            N+MID+YG+  M + 
Sbjct: 495 SDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPER 554

Query: 212 ------------DADRL---------------------FWSMRKMGIDPSVVSYNTLLRV 238
                        AD++                      W M+  G   S+ +YN++L  
Sbjct: 555 AHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDA 614

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG+A    +   +   M+   +  ++ +YN +I  YGK+    +   L + MQ  G+ P+
Sbjct: 615 YGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPD 674

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+TII  +G A   DRA   F+ ++ +G+  D V Y  ++  +ER G +  A R   
Sbjct: 675 RWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEAARWCL 734

Query: 359 ELRQ 362
            + Q
Sbjct: 735 RMSQ 738



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +FAYNV++   +R    E A  ++  M +  + PD YTY +++    K  +   A     
Sbjct: 431 IFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYW 490

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           ++    V  D V+ + ++    K     +   +F  +   G VP  + +N MI+++GKA 
Sbjct: 491 RLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAG 550

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           + + A   ++ + +Q    D +S+STL++ Y +   F    +   EM        L   N
Sbjct: 551 MPERAHKALK-LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYN 609

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            ++D YG+    +    +   M   G+   + SYN L+  YG+  +  E   LFR MQ +
Sbjct: 610 SILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEE 669

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +  TYNT+I+ YG +   ++A    + MQ+ GI P+ +TY  +++ + +AG +D A
Sbjct: 670 GVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEA 729

Query: 319 AMLFQKLRSSG 329
           A    ++  +G
Sbjct: 730 ARWCLRMSQAG 740



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 33/263 (12%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQ-EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
           NV  YN M KI G   E  K  + +  +MQ    EP+  T++T+I    KA  +D A + 
Sbjct: 10  NVYAYNIMFKILGARHEWSKIDDFLGGKMQEDECEPDQYTFNTLIMSASKANYVDYATIT 69

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
           FQ +  +GV    + Y  M++ Y+R     H K                          +
Sbjct: 70  FQLMLQTGVLPSILTYSMMLLLYQR-----HRK--------------------------V 98

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            EA  VF    ++G V+ +  +  MI L++R   +    ++  +MR     PD       
Sbjct: 99  AEAESVFSHMLNSG-VQAVVAYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNWLKQ 157

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           LN+YG+  + E A+ +   ++E G       +  M++ YG    ++    L E++  +  
Sbjct: 158 LNTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDL 217

Query: 502 INKKELHHVVAGIYERANRLNDA 524
           +     +  + G   R  +L +A
Sbjct: 218 VPDSITYSCMIGACGRVGKLKEA 240



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 2/148 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  + A Y  S+ AYN +L    +A Q E    +   M   G+  D  +Y+ LI  +GK 
Sbjct: 594 WEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKN 653

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS-KAISIFSRLKSSGIVPDLVA 126
            M     +  + M+++ V  D   Y+ +I      +DY  +A+  F  ++ +GI PD V 
Sbjct: 654 YMIAEMETLFRTMQEEGVVPDRWTYNTIIR-TYGFADYPDRAVYWFKAMQDAGISPDRVT 712

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQG 154
           Y  +++ F +A    EA      M + G
Sbjct: 713 YMILVSTFERAGNIDEAARWCLRMSQAG 740


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 232/494 (46%), Gaps = 8/494 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            I D +      +P+  +   ++R + +AK    A  +F +++ R   P   TY+++I  
Sbjct: 140 TIQDMVKGSCAMAPAELSE--IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILM 197

Query: 64  FGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             +EG  +       +M  +     D V YS LI    KL+    AI +F  +K +G+ P
Sbjct: 198 LMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQP 257

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
               Y T++ ++ K    +EA  L++EMR +       +Y+ L+    ++ +  +A   +
Sbjct: 258 TAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTY 317

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
             M +  C  D+   N +I++ G+ +  +DA +LF  M+ +   P+VV+YNT+++   EA
Sbjct: 318 KNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEA 377

Query: 243 EL-FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           +    EA   F  M++  I  +  TY+ +I  Y K+   EKA  L++EM  +G  P    
Sbjct: 378 KAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 437

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y ++I   G A + D A  LFQ+L+ +       +Y  MI  + + G +  A  L +E++
Sbjct: 438 YCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMK 497

Query: 362 QPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    P   A    +T + RA R++EA  +FR   + G   DI+    ++   +R     
Sbjct: 498 KLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPK 557

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E+F KM+++   PD      +L    +   FE A  L  EM  +G  +    +  +L
Sbjct: 558 GALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSIL 617

Query: 478 SLYGARKDFNMLES 491
              G   D  M+ES
Sbjct: 618 EAVGKVDDCKMVES 631



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/437 (21%), Positives = 195/437 (44%), Gaps = 16/437 (3%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D  KA+ +        +V +++  +  ++V  K + FK A       + +  + D+ +Y 
Sbjct: 71  DAEKALEVLKLKVDPRLVREILKIDVEVSV--KIQFFKWAG------KRRNFEHDSTTYM 122

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            L+    E+  F E      +M + +C +     + ++ + G+  M   A  +F+ ++  
Sbjct: 123 ALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGR 182

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE--QNVVTYNTMIKIYGKSLEHE 281
              P+  +YN+++ +  + E   E +H        E+    + VTY+ +I  + K    +
Sbjct: 183 KCRPTASTYNSIILMLMQ-EGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDD 241

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  L  EM+  G++P A  Y+T++ I+ K GK++ A  L +++R+    +    Y  +I
Sbjct: 242 SAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELI 301

Query: 342 VAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               + G V  A    K +L +  +P+ +     I IL R+  + +A  +F +       
Sbjct: 302 RGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCA 361

Query: 398 KDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
            ++  +  +I+ LF      +     FE+M+  G  P S   +++++ Y K    E A  
Sbjct: 362 PNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALL 421

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L  EM E+G       +  +++  G  K +++   LF+ L  +   +   ++ V+   + 
Sbjct: 422 LLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFG 481

Query: 517 RANRLNDASRIMNRMNK 533
           +  RLN+A  + N M K
Sbjct: 482 KCGRLNEAINLFNEMKK 498



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 33/302 (10%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR- 293
           ++R+ G+A++   A+ +F  ++ ++      TYN++I +  +   HEK   L  EM +  
Sbjct: 159 IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEV 218

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
              P+ +TYS +I+ + K  + D A  LF +++ +G++    +Y T++  Y +VG V  A
Sbjct: 219 HCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEA 278

Query: 354 KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
             L+ E+R      R   +T+          T + R    +G V+D  +           
Sbjct: 279 LGLVKEMRA-----RRCLLTVFT-------YTELIRGLGKSGRVEDAYM----------- 315

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
                    ++ M   G  PD  ++  ++N  G+      A  L+ EM+   C  +   +
Sbjct: 316 --------TYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTY 367

Query: 474 FQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             ++ SL+ A+   +   S FER+  D  +     + ++   Y + NR+  A  ++  M+
Sbjct: 368 NTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMD 427

Query: 533 KR 534
           ++
Sbjct: 428 EK 429


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 226/471 (47%), Gaps = 10/471 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   +++++R     ++ + A   F  M+++GI P   T + +++ F K    + A    
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M + R+S  +  ++ ++ +  K     KA      ++  G  P++V+YNT+I+ +   
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + AR +++ MR +G++PD+ +Y +L++   +  +  EA  +F +M E+    +  T 
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 198 NIMIDVYGQLDMAKDADRLFW---SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N +ID Y       D +R F     M K GI PSV +YN L+         GEA  + + 
Sbjct: 358 NTLIDGYCN---KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M++K I  + +TYN +I  Y +    +KA +L  EM ++GIEP  +TY+++I +  +  +
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +  A  LF+K+   GV  D +++  M+  +   G V  A  LL E+ + +  P E     
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     R G++EEA  +  +    G   D   +  +I  + R     +   V ++M S G
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           + P       ++    K +E + A++L  EM  +G    D  +  ++   G
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 203/431 (47%), Gaps = 4/431 (0%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ +E    P +   N +L   L+  + E+A  L+ EM +  I+   YT++ ++    KE
Sbjct: 203 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 262

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G    A  ++  ME      ++V Y+ +I       +   A  I   ++  GI PD   Y
Sbjct: 263 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            ++I+   K    +EA  L ++M E G+ P+ V+Y+TL++ Y        A S   EM +
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                 ++T N+++          +AD +   MRK GI P  ++YN L+  Y       +
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKK 442

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L   M  K IE   VTY ++I +  +    ++A +L +++ ++G+ P+ I ++ ++ 
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
                G ++RA ML +++    V  D V + T++    R G V  A+ LL E++    +P
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T I+   R G I++A  V  +    G    +  +  +I+   +N++     E+ 
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622

Query: 424 EKMRSAGYFPD 434
           ++M + G  PD
Sbjct: 623 KEMVNKGISPD 633



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 184/398 (46%), Gaps = 39/398 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V +YN ++         E A  + D MR +GI PD YTY +LI+   KEG  + A 
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA- 338

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                      SG   L+  ++E+                    G+VP+ V YNT+I+ +
Sbjct: 339 -----------SG---LFDKMVEI--------------------GLVPNAVTYNTLIDGY 364

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 + A    +EM ++G+ P   +Y+ L++      +  EA  +  EM +     D 
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+I+ Y +   AK A  L   M   GI+P+ V+Y +L+ V        EA  LF  
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  + +  +V+ +N M+  +  +   E+A  L++EM  + + P+ +T++T++    + GK
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           ++ A ML  +++  G++ D + Y T+I  Y R G +  A R+  E+      P  +    
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            I  L +    + A  + ++  + G   D S +  +IE
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 142/299 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++         E A    DEM ++GI P   TY+ L+     EG    A   
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +  +  D + Y+ LI    +  +  KA  + + + S GI P  V Y ++I V  +
Sbjct: 412 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  L E++ +QGV PD + ++ +++ +  N     A  +  EM+  + P D  T
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +    ++A  L   M++ GI P  +SYNTL+  YG      +A  +   M 
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  ++TYN +IK   K+ E + A  L++EM N+GI P+  TY ++I   G    L
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 186/412 (45%), Gaps = 7/412 (1%)

Query: 80  MEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           + +DR+S    +++  L+ +  +L    +A   F  +K  GIVP +   N M+++F K  
Sbjct: 169 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLN 228

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             + A +L  EM    +     +++ ++N+  +  K  +A      M  +    ++ + N
Sbjct: 229 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I  Y      + A R+  +MR  GI+P   +Y +L+    +     EA  LF  M   
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I  Y    + E+A +   EM  +GI P+  TY+ ++      G++  A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             + +++R  G+  D + Y  +I  Y R G    A  L +E+     +P  +   + I +
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L+R  R++EA  +F +  D G   D+ +F  M++    N        + ++M      PD
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
                 ++    +  + E A  L  EM+  G +  D + +  ++S YG R D
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRRGD 579



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 43/396 (10%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           Y  A+ + +RL S  +   L+       +    +LF E  L     R++     ++ +  
Sbjct: 129 YCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTL----SRDRLSVKSSIVFDL 184

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+ +  E  +  EA   F  M E      + TCN M+ ++ +L+  + A  L+  M ++ 
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 244

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I  +V ++N ++ V  +     +A      M+    + NVV+YNT+I  Y      E A 
Sbjct: 245 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 304

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++  M+ +GIEP++ TY ++I+   K G+L+ A+ LF K+   G+  + V Y T+I  Y
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDI 400
              G +  A     E+ +   +P  +   +L  A    GR+ EA                
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD--------------- 409

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                               ++ ++MR  G  PD+    +++N Y +    + A DL++E
Sbjct: 410 --------------------DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           M  +G   +   +  ++ +   R      + LFE++
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 107/231 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN+++    R    + A  L +EM  +GI P   TY++LI    +      A   
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    VS D+++++ +++      +  +A  +   +    + PD V +NT++    +
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 541

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EAR+L++EM+ +G+KPD +SY+TL++ Y       +A  V  EM  +     L T
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 601

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            N +I    +      A+ L   M   GI P   +Y +L+   G  +   E
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 252/531 (47%), Gaps = 9/531 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDSAIS 75
           P    YN ++    +AK+   A  LF+ M++ G   P+  TYS LI C+ K G     + 
Sbjct: 147 PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLG 206

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++ME++ +  D+ +YS+LI       D      +F  +    + P++V Y+ ++   G
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   ++EA  ++++M  +GV+PD V+Y+ L +   +N +  +A+ V   M +        
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++++   + D   DA  +   M K G  P  V+YNTLL+    A    EA+ L++L+
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 256 --QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             ++  ++ +V T N +I+   K      A  +   M   G++ N +TY+ +I  +  A 
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           KL  A  L++    SG   + + Y  MI    ++ +++ A+ L  +++    +P  I   
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             +T L R   +E+A  +F++  +     D+  F  +I+   +     +  E+  +M   
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
              PD+   ++++N + KL   + A  LY +M   G V    V   +L  YG + +   +
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626

Query: 490 ESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
            SL  ++ D D  ++ K    ++A +   +  L D  +I+ + +++    S
Sbjct: 627 ISLLHQMADKDVVLDSKLTSTILACLCHMSRNL-DVEKILPKFSQQSEHTS 676



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 252/537 (46%), Gaps = 19/537 (3%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I+ +    PS  A + ++ N+ +A+Q++    ++ +M    + P   + S L   F    
Sbjct: 32  IDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTH 91

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLI--ELARKLSDYSKAISIFSRLKSS--GIVPDL 124
               A S L  M + R  G  V   NL+     R      KA+S+FS++K +   +VPD 
Sbjct: 92  HPSFAFSVLSLMTK-RGFGVNVYNLNLVLKGFCRS-GQCDKAMSLFSQMKRNYDCVVPDC 149

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           V YNT++N F KAK   EAR+L E M++ G  +P+ V+YS L++ Y ++ +  E L +  
Sbjct: 150 VTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLE 209

Query: 184 EMNEVNCPLDLTTCNIMIDVY-GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           EM       D+   + +I  + G+ D+ +    LF  M +  + P+VV+Y+ L++  G  
Sbjct: 210 EMEREGLKADVFVYSSLISAFCGEGDI-ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRT 268

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
             + EA  + + M  + +  +VV Y  +     K+     A  ++  M  +G EP  +TY
Sbjct: 269 GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLH 358
           + ++    K  ++D A  + + +   G + D V Y T++      G +  A    K LL 
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388

Query: 359 EL--RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           E    +P+       I  L + GR+ +A  +     + G   +I  +  +IE +   +K 
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
              +++++    +G+ P+S   ++++N   K++    A  L+ +M++ G +    + +  
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG-IRPTVIDYNA 507

Query: 477 LSLYGARKD-FNMLESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L     R+D      SLF+ + + + N++    + ++ G   +A  +  A  +++ M
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL-KAGDVKSAKELLSEM 563



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 184/437 (42%), Gaps = 45/437 (10%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + SP+V  Y+ +++ + R  +W  A  +  +M  RG+ PD   Y+ L     K G    A
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDA 309

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  L  M Q       + Y+ ++    K      A  +   +   G  PD V YNT++  
Sbjct: 310 IKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKG 369

Query: 134 FGKAKLFKEA----RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
              A    EA    +LL+ E  +  VKPD                      VF       
Sbjct: 370 LCGAGKIHEAMDLWKLLLSE--KFHVKPD----------------------VF------- 398

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                 TCN +I    +     DA R+  SM +MG+  ++V+YN L+  Y  A    EA+
Sbjct: 399 ------TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL 452

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L++         N +TY+ MI    K      A  L  +M++ GI P  I Y+ ++   
Sbjct: 453 KLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSL 512

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            +   L++A  LFQ++R+    +D V +  +I    + G V  AK LL E+   + +P  
Sbjct: 513 CREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDA 572

Query: 370 TAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
              +IL    ++ G ++EA  ++ +    G V  + VF  +++ +    +   +I +  +
Sbjct: 573 VTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQ 632

Query: 426 MRSAGYFPDSHIIALVL 442
           M       DS + + +L
Sbjct: 633 MADKDVVLDSKLTSTIL 649



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 91/182 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+ +SP+   Y+V++  + + +   +A GLF +M+  GI P    Y+ L+T   +E   +
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLE 519

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S  Q+M     + D+V ++ +I+   K  D   A  + S +    +VPD V ++ +I
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F K  +  EA  L E+M   G  P  V + +LL  Y    +  + +S+  +M + +  
Sbjct: 580 NRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVV 639

Query: 192 LD 193
           LD
Sbjct: 640 LD 641



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 73/331 (22%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +LD + ++    P    YNVV+  + +  + + A G+ + M ++G  PD  TY+TL+
Sbjct: 309 AIKVLDLMVQKGE-EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367

Query: 62  -------------------------------TC------FGKEGMFDSAISWLQQMEQDR 84
                                          TC        KEG    A      M +  
Sbjct: 368 KGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG 427

Query: 85  VSGDLVLYSNLIE---LARKL------------SDYSK--------------------AI 109
           + G++V Y+ LIE    ARKL            S +S                     A 
Sbjct: 428 LQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVAR 487

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +F ++K SGI P ++ YN ++    +    ++AR L +EMR      D VS++ +++  
Sbjct: 488 GLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGT 547

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
           ++      A  + +EM  ++   D  T +I+I+ + +L M  +A  L+  M   G  P V
Sbjct: 548 LKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGV 607

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           V +++LL+ YG      + I L   M  K++
Sbjct: 608 VVFDSLLKGYGLKGETEKIISLLHQMADKDV 638


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 9/444 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+ D +  E   +P V  +N ++  +    +   A  L ++M  +G+  D  TY T++
Sbjct: 210 AVALFDQM-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G   SA++ L +ME+  +  D+V+YS +I+   K   +S A  +FS +   GI 
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++  YN MI+ F     + +A+ L+ +M E+ + PD ++++ L++  V+  K  EA  +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM       D  T N MI  + + +   DA  +F  M      P VV++NT++ VY  
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + L R + R+ +  N  TYNT+I  + +      A +L QEM + G+ P+ IT
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
            + ++  + +  KL+ A  LF+ ++ S +++D V Y  +I    +   V  A  L   L 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+       I+       I +A  +F +  D G   D S +  +I    +  +  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 418 NVIEVFEKMRSAGYFPDSHIIALV 441
             IE+  +MRS G+  D+  I +V
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKMV 648



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 210/432 (48%), Gaps = 8/432 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LFD+M + G+ P   T++TLI     EG    A + + +M    +  D+V Y  ++ 
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K+ D   A+++ S+++ + I PD+V Y+ +I+   K     +A+ L  EM E+G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +  +Y+ +++ +    ++ +A  +  +M E     D+ T N +I    +     +A++L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M    I P  V+YN+++  + +   F +A H+F LM   +    VVT+NT+I +Y ++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRA 445

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++   L++E+  RG+  N  TY+T+I  + +   L+ A  LFQ++ S GV  D +  
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
             ++  +     +  A  L   ++      +T+     I  + +  +++EA  +F     
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+  +  MI  F      ++   +F KM+  G+ PD+     ++    K  E + 
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 454 ADDLYSEMQEEG 465
           + +L SEM+  G
Sbjct: 626 SIELISEMRSNG 637



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 232/504 (46%), Gaps = 29/504 (5%)

Query: 3   VAILDWINEEARYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           VAI  +   E R  P +++++N++++      +   +   F ++ + G  PD  T++TL+
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G+            +DR+S  L L+  ++E     + + +A+++F ++   G+ 
Sbjct: 184 -----HGL----------CLEDRISEALALFGYMVE-----TGFLEAVALFDQMVEIGLT 223

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P ++ +NT+IN         EA  L+ +M  +G+  D V+Y T++N   +      AL++
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            ++M E +   D+   + +ID   +     DA  LF  M + GI P+V +YN ++  +  
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              + +A  L R M  +EI  +V+T+N +I    K  +  +A  L  EM +R I P+ +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+++I  + K  + D A  +F  + S     D V + T+I  Y R   V    +LL E+ 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +     NT    T I        +  A  +F++    G   D      ++  F  N+K  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E+FE ++ +    D+    ++++   K  + + A DL+  +   G     Q +  M+
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 478 SLYGARKDFNMLESLFERLDSDSN 501
           S +  +   +    LF ++  + +
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGH 603



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 196/427 (45%), Gaps = 21/427 (4%)

Query: 57  YSTLITCFGKEGMF------DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
           + T + C    G+F      D AIS  ++ME  R+  ++  ++ LI+        S ++S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 111 IFSRLKSSGIVPDLVAYNTMIN-------------VFGKA--KLFKEARLLIEEMREQGV 155
            F +L   G  PD+V +NT+++             +FG      F EA  L ++M E G+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P  ++++TL+N      + +EA ++  +M      +D+ T   +++   ++   K A  
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M +  I P VV Y+ ++    +     +A +LF  M  K I  NV TYN MI  + 
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                  A  L+++M  R I P+ +T++ +I+   K GKL  A  L  ++    +  D V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            Y +MI  + +      AK +   +  P+ +   T I +  RA R++E   + R+    G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            V + + +  +I  F          ++F++M S G  PD+    ++L  + +  + E A 
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522

Query: 456 DLYSEMQ 462
           +L+  +Q
Sbjct: 523 ELFEVIQ 529



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 5/307 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  +N ++   ++  +   A  L DEM  R I PD  TY+++I  F K   FD
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M     S D+V ++ +I++  +     + + +   +   G+V +   YNT+I
Sbjct: 419 DAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F +      A+ L +EM   GV PDT++ + LL  + EN K  EAL +F  +      
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD    NI+I    +     +A  LF S+   G++P V +YN ++  +       +A  L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+    E +  TYNT+I+   K+ E +K+  L+ EM++ G   +A T   ++A    
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLIT 653

Query: 312 AGKLDRA 318
            G+LD++
Sbjct: 654 DGRLDKS 660



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 173/382 (45%), Gaps = 34/382 (8%)

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V  + ++ ++V  ++   A+S++ +M     PL++ + NI+I  +        +   F  
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           + K+G  P VV++NTLL      +   EA+ LF  M      + V  ++ M++I      
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI------ 220

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                         G+ P  IT++T+I      G++  AA L  K+   G+ ID V Y T
Sbjct: 221 --------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++    ++G    A  LL ++ +    P+ +     I  L + G   +A ++F +  + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
              ++  + CMI+ F    ++++   +   M      PD     AL+  S  + + FE A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-A 385

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHHVVA 512
           + L  EM    C+F D V +  + +YG  K   F+  + +F+ + S   +      + + 
Sbjct: 386 EKLCDEMLHR-CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFDLMASPDVVT----FNTII 439

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            +Y RA R+++  +++  +++R
Sbjct: 440 DVYCRAKRVDEGMQLLREISRR 461


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 5/466 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+++ +N ++    +      A     ++ Q G+ PD +TY++LI    +    D+A  
Sbjct: 191 SPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M Q     + V Y+NLI    +    ++A+ +F+ +      P +  Y  +I    
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    EA  L  EM+E+G +P+  +Y+ L++   + +K  EA  + +EM+E      + 
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID Y +  M  DA  +   M      P+  +YN L+    +     +A+ L   M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +++  +++TYN++I    K  + E A  L+  M   G+ P+  TYS  I    K G++
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETA 371
           + A  LF  +++ GV+ + V+Y  +I  Y +VG +  A    +R+L++   PN+      
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L +  +++EA+ +  +    G    +  +  +I    ++  + + ++VF  M S GY
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            PD       L++Y      E  DD+ ++M EEG +  D V + +L
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG-ILPDLVTYTVL 655



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 214/504 (42%), Gaps = 54/504 (10%)

Query: 1   RSVAILDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R V  L+  NE  E    P+V  Y V++  + +  + + A  +  EM ++G+ P   TY+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
            LI  + KEGM D A   L  ME +    +   Y+ LI    K     KA+++ +++   
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 119 GIVPDLVAYNTMINVFGKAK--------------------------------LFKEARL- 145
            + P L+ YN++I+  G+ K                                L KE R+ 
Sbjct: 434 KLSPSLITYNSLIH--GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 146 ----LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
               L + ++ +GVK + V Y+ L++ Y +  K   A S+   M    C  +  T N++I
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +   +    K+A  L   M  MG+ P+VV+Y  L+    +   F  A+ +F  M     +
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V TY   +  Y      E+  +++ +M   GI P+ +TY+ +I  + + G   RA   
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            + +  +G +  P LY   I+           K L HE R   T   E  I  ++     
Sbjct: 672 LKCMVDTGCK--PSLYIVSIL----------IKNLSHENRMKET-RSEIGIDSVSNTLEY 718

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E A  +F +  + G   D+S++G +I  F + ++      +   M+  G  P   I   +
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           L+   KL  +  A  L   M E G
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENG 802



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 211/488 (43%), Gaps = 22/488 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  Y V++  +  + +   A  LF+EM+++G  P+ +TY+ LI    KE   D
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M +  +   +V Y+ LI+   K      A  I   ++S+   P+   YN +I
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K +   +A  L+ +M E+ + P  ++Y++L++   + +    A  + + MNE    
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T ++ ID   +    ++A  LF S++  G+  + V Y  L+  Y +      A  L
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       N  TYN +I+   K  + ++A++L+ +M   G++P  +TY+ +I    K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G  D A  +F  + S G + D   Y   + AY   G++     ++ ++ +   +P    
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK------------ 415
            T+L    AR G    A    +   D G    + +   +I+  S   +            
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711

Query: 416 ------YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
                 Y   +++FEKM   G   D  I   ++  + +    E A  L   M+E G   S
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771

Query: 470 DQVHFQML 477
           + ++  +L
Sbjct: 772 EDIYNSLL 779



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 202/465 (43%), Gaps = 33/465 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + SPS+  YN ++    +    E A+ L   M + G+ PD++TYS  I    KEG  +
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +    ++   V  + V+Y+ LI+   K+     A S+  R+ +   +P+   YN +I
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K K  KEA  L+ +M   GVKP  V+Y+ L+   +++  F  AL VF  M  +   
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T    +  Y    M ++ D +   M + GI P +V+Y  L+  Y    L   A   
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWG 310
            + M     + ++   + +IK    +L HE   N M+E ++  GI+  + T    IA+  
Sbjct: 672 LKCMVDTGCKPSLYIVSILIK----NLSHE---NRMKETRSEIGIDSVSNTLEYEIAL-- 722

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE- 369
                     LF+K+   G  ID  +Y  +I  + +   +  A+ L+H +++    P E 
Sbjct: 723 ---------KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773

Query: 370 ---TAITILARAGRIEEATWVFRQAFDAG-----EVKDISVFGCMIELFSRNKKYANVIE 421
              + +    + G   EA  +     + G     E   + V G  IE  +   K      
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK-----A 828

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           VF  + S GY  D     ++++   K    +   +L   M+E+GC
Sbjct: 829 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 150/348 (43%), Gaps = 18/348 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YNV++  + + K+ + A  L  +M   G+ P   TY+ LI    K+G FD A+  
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M       D+  Y+  +          +   + +++   GI+PDLV Y  +I+ + +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENH-----------------KFVEA 178
             L   A   ++ M + G KP     S L+ NL  EN                  ++  A
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +F +M E  C +D++    +I  + Q +  ++A  L   M++ G+ PS   YN+LL  
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +  ++ EA+ L   M    +   + +Y  ++        +EKA  +   + + G   +
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            + +  +I    K   +D  + L   +   G + +P+ Y  +I   ER
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 223/498 (44%), Gaps = 48/498 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V  YN ++ ++ +A   E A  L  +M  R   P+  TYS LI    K G  D
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303

Query: 72  SAISWLQQMEQD---------------------------------------RVSGDLVLY 92
            A   +Q+M +                                        RVS D V +
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 363

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           S LI+   K     +A S+F  + + G VP+++ YN ++N   KA   + A  +IE M +
Sbjct: 364 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 423

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +GV PD ++YS L++ + +  +  EAL +   M    C  ++ T N +ID   + D + +
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 483

Query: 213 ADRLFWSMR-KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           A ++F  M  K G+ P  ++Y TL+         G+A  L   M     + +   +N  I
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCI 539

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               K  +  +A  +   M    + P+ +T++ +IA   KAG  ++A+ LF+++ +  ++
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            D + +  +I    + G V  A+ +L  +      PN +     +  L ++GRIEEA   
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +   +G V D   +G ++    R  +  + +++  +++S G+ PD+    ++++   K
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 448 LREFETADDLYSEMQEEG 465
             + E A  +  EM  +G
Sbjct: 720 SGQTEQAITVLEEMVGKG 737



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 221/475 (46%), Gaps = 19/475 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+V  +N ++  + ++ +   A  +FD+M  + G+ PD+ TY TLI    + G    A 
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L  M       D   ++  I    KL D S+A+ +++R+    +VPD V +N +I   
Sbjct: 522 ALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA  F++A  L EEM  + ++PD +++  L++   +  +   A  +   M  +  P ++
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 637

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++    +    ++A +    M   G  P  ++Y +L+     A    +A+ L   
Sbjct: 638 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 697

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++    + + VTYN ++    KS + E+A  +++EM  +G  P+ +TY+T+I    KAG 
Sbjct: 698 LKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757

Query: 315 LDRAAMLFQKLR---SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------PNT 365
           L+ A  L   +    S     + V Y  +I    +VG +  A+ L+ E+ +      PN 
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNI 817

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVK---DISVFGCMIELFSRNKKYANVIEV 422
           I   + +  L +   + EA  + R   D G ++   D   F  +I+   +  +      V
Sbjct: 818 ITYNSFLDGLCKQSMMAEACELMRSLRD-GSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           F+ M + GY P+     +++N   K  + E A  +   M ++G V  D + + +L
Sbjct: 877 FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG-VTPDVITYSVL 930



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 218/461 (47%), Gaps = 12/461 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP    ++ ++  + +  Q + A  +FD+M   G  P+  TY+ L+    K    + A
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + ++ M    V+ D++ YS L++   K S   +A+ +   + S G  P++V +N++I+ 
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474

Query: 134 FGKAKLFKEARLLIEEMR-EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             K+    EA  + ++M  + G+ PD ++Y TL++      +  +A ++   M +     
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP---- 530

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    N  I+   +L     A +++  M ++ + P  V++N L+    +A  F +A  LF
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K ++ +V+T+  +I    K+ + E A +++  M N G+ PN +TY+ ++    K+
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           G+++ A    +++ SSG   D + Y +++ A  R      A +L+ EL+     P+T+  
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR- 427
              +  L ++G+ E+A  V  +    G   D+  +  +I+   +         +   M  
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 428 --SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             S    P+    ++++N   K+   + A +L  EM  + C
Sbjct: 771 RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 211/488 (43%), Gaps = 46/488 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V  +  ++  + +A Q E A  + D M   G+ P+  TY+ L+    K G  + A  +
Sbjct: 600  PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            L++M       D + Y +L+    + S    A+ + S LKS G  PD V YN +++   K
Sbjct: 660  LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV---NCPLD 193
            +   ++A  ++EEM  +G  PD V+Y+TL++   +     EA  +  +M+      C  +
Sbjct: 720  SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID--PSVVSYNTLLRVYGEAELFGEAIHL 251
            + T +++I+   ++    +A  L   M +   D  P++++YN+ L    +  +  EA  L
Sbjct: 780  VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839

Query: 252  FRLMQRKE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             R ++     +  + VT++T+I    K  + ++A N+  +M   G  PN +TY+ ++   
Sbjct: 840  MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGL 899

Query: 310  GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
             K  K++RA  + + +   GV  D + Y  ++ A+ +   V  A  LLH +      PN 
Sbjct: 900  CKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV 959

Query: 366  IPRETAITILARAGRIEEATWVFR-----------------------------QA---FD 393
            +   + I  L ++ +  EA  +F                              QA    D
Sbjct: 960  VTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD 1019

Query: 394  AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            A    D   F C I   S   K  +V     +M      PD     +++    K   FE 
Sbjct: 1020 AMPDPDTYAFNCCINGLS---KLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQ 1076

Query: 454  ADDLYSEM 461
            A  L+ EM
Sbjct: 1077 ASALFEEM 1084



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 234/503 (46%), Gaps = 21/503 (4%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI-TCFG 65
           DW      +  ++F++N  L  ++++     A  LF         P+ +TYSTL+   + 
Sbjct: 99  DWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYK 158

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF-SRLKSSGIVPDL 124
             G  +  + + +++     S  +  Y+ +++   +  + ++A+ IF   +   G+ P +
Sbjct: 159 AGGDVERTLGFFRRIRSSSRS--VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTI 216

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YNT+IN   K+        L EE+ E+G  PD V+Y+TL++   +     EA  +  +
Sbjct: 217 VTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 276

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID--PSVVSYNTLLRVYGEA 242
           M+  +C  ++ T +++I+   ++    +A  L   M +   D  P++++YN+ L    + 
Sbjct: 277 MSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336

Query: 243 ELFGEAIHLFRLMQRKE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            +  EA  L R ++     +  + VT++T+I    K  + ++A ++  +M   G  PN I
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ ++    KA K++RA  + + +   GV  D + Y  ++ A+ +   V  A  LLH +
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQ-AFDAGEVKDISVFGCMIELFSRNKK 415
                 PN +   + I  L ++ R  EA  +F   A   G V D   +  +I+   R  +
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
                 + + M      PD++     +N   KL +   A  +Y+ M E   V  D+V F 
Sbjct: 517 AGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELV-PDKVTFN 571

Query: 476 MLSLYGARK--DFNMLESLFERL 496
           +L + GA K  +F    +LFE +
Sbjct: 572 IL-IAGACKAGNFEQASALFEEM 593



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/540 (22%), Positives = 231/540 (42%), Gaps = 35/540 (6%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A   P  +A+N  +  + +      A  +++ M +  + PD+ T++ LI    K G F+
Sbjct: 525  DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A +  ++M    +  D++ +  LI+   K      A  I   + + G+ P++V YN ++
Sbjct: 585  QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            +   K+   +EA   +EEM   G  PD+++Y +L+       +  +AL + +E+      
Sbjct: 645  HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             D  T NI++D   +    + A  +   M   G  P VV+YNTL+    +A    EA  L
Sbjct: 705  PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 252  FRLMQ---RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE--PNAITYSTII 306
               M     +    NVVTY+ +I    K    ++A  L+QEM  +  +  PN ITY++ +
Sbjct: 765  HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824

Query: 307  AIWGKAGKLDRAAMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
                K   +  A  L + LR   + + P  V + T+I    + G    A  +  ++    
Sbjct: 825  DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884

Query: 363  --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
              PN +     +  L +  ++E A  +     D G   D+  +  +++ F +       +
Sbjct: 885  YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944

Query: 421  EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            E+   M S G  P+      +++   K  +   A  ++ +M  +  +  D++ +  L   
Sbjct: 945  ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTL--- 1001

Query: 481  GARKDFNMLESLFER---------LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
                    ++ LF           LD+  + +    +  + G+    ++L D SR ++RM
Sbjct: 1002 --------IDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGL----SKLGDVSRALHRM 1049



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 206/484 (42%), Gaps = 46/484 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P+V  YN ++  + ++ + E A    +EM   G  PD  TY +L+    +    D A+  
Sbjct: 635  PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + +++      D V Y+ L++   K     +AI++   +   G  PD+V YNT+I+   K
Sbjct: 695  VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754

Query: 137  AKLFKEARLLIEEMREQ---GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL- 192
            A   +EAR L  +M  +      P+ V+YS L+N   +  +  EA  +  EM   +C + 
Sbjct: 755  AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL 814

Query: 193  -DLTTCNIMIDVYGQLDMAKDADRLFWSMR--KMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             ++ T N  +D   +  M  +A  L  S+R   + + P  V+++TL+    +     EA 
Sbjct: 815  PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874

Query: 250  HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            ++F  M       NVVTYN ++    K+ + E+A  +++ M ++G+ P+ ITYS ++  +
Sbjct: 875  NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934

Query: 310  GKAGKLDRAAMLFQKLRS------------------------------------SGVEID 333
             KA  +D A  L   + S                                     G+  D
Sbjct: 935  CKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPD 994

Query: 334  PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             + Y T+I    R G    A+ LL  +  P+T      I  L++ G +  A     +  +
Sbjct: 995  KITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRA---LHRMLE 1051

Query: 394  AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
               V D   F  +I    +   +     +FE+M +    PD      +++   K  + E 
Sbjct: 1052 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 1111

Query: 454  ADDL 457
              D+
Sbjct: 1112 TWDI 1115



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 20/381 (5%)

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           EL  +  D++ A+  F           + ++N  +N+  K+    +A  L         +
Sbjct: 92  ELGTQFYDWAAALPGFKHT--------IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCR 143

Query: 157 PDTVSYSTLLNLYVENHKFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           P+  +YSTLL    +    VE  L  F  +   +    +   NI++    +      A  
Sbjct: 144 PNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSS--RSVADYNIVLQSLCRAGETARALE 201

Query: 216 LF-WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +F   M + G+ P++V+YNT++    ++   G  + LF  +  +    +VVTYNT+I   
Sbjct: 202 IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSL 261

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K+ + E+A  L  +M +R   PN +TYS +I    K G++D A  L Q++     ++ P
Sbjct: 262 CKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 321

Query: 335 --VLYQTMIVAYERVGLVAHAKRLLHELR------QPNTIPRETAITILARAGRIEEATW 386
             + Y + +    +  + A A  L+  LR       P+T+   T I  L + G+I+EA  
Sbjct: 322 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 381

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VF      G V ++  +  ++    +  K      + E M   G  PD    +++++++ 
Sbjct: 382 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 441

Query: 447 KLREFETADDLYSEMQEEGCV 467
           K    + A +L   M   GC 
Sbjct: 442 KASRVDEALELLHGMASRGCT 462



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 14/156 (8%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            +P+V  +N ++  + ++ Q   A  +FD+M  + G+APD+ TY TLI     +G+F +  
Sbjct: 956  TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI-----DGLFRTG- 1009

Query: 75   SWLQQME---QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             W  Q E         D   ++  I    KL D S+A+     L+   +VPD V +N +I
Sbjct: 1010 -WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILI 1065

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
                KA  F++A  L EEM  + ++PD +++  L++
Sbjct: 1066 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 1101


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 229/493 (46%), Gaps = 6/493 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP + +YN ++  + +AK+ + A GL  EM   G  P+  T +TL+    K+G  D A+ 
Sbjct: 176 SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 235

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M++     D+VLY  LI       +  +   +F  +   GI  ++V Y+ +++   
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   +KEA  ++  M E G+ PD V+Y+ L++   ++ +   A+ +   M E        
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N+++    +  +  DA ++   M + G    VV+YNTL++   +     EA+ LF  M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 256 QRKE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
              E  +E NV T+N +I    K     KA  + ++M  +G   N +TY+ ++    KAG
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K+  A  L++++   G   +   Y  +I  + ++ ++  AK L  E+R     P      
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  L + G +E+A  +F++  +A    DI  F  MI+   +   +  V E+  KM   
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  PD+   + ++N   KL E + A      M   G      V+  +L    ++ D   +
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655

Query: 490 ESLFERLDSDSNI 502
            +L  ++ +   +
Sbjct: 656 INLLHQMAAKGTV 668



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 207/456 (45%), Gaps = 6/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS  + + ++     A++ +L  G+   + +RG   + +  + ++    + G    A+  
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +  VS D+V Y+ LI    K     +A+ +   ++++G  P+ V   T+++   K
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L+E M+++G   D V Y TL++ +  N        +F EM       ++ T
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++    +L   K+A+ +  +M + GI P VV+Y  L+    +      A+ L  LM 
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K  E + VTYN ++    K      A  +++ M  +G + + +TY+T++      GK+D
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 317 RAAMLFQKL--RSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRET 370
            A  LF  +    + +E +   +  +I    + G +  A    ++++ +    N +    
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +    +AG+I+EA  +++Q  D G V +   +  +I+ F + +       +F +MR+ G
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             P       ++ S  K    E A  L+ EM    C
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 39/315 (12%)

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           N +F EA+S+F    + N      TCN ++D   +      A  ++  M  + + PS  S
Sbjct: 52  NSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGS 111

Query: 232 YNTLLRVYGEAEL----FG-------------------------------EAIHLFRLMQ 256
            + L+  + +A+     FG                               EA+ L R M 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK +  ++V+YNT+I    K+ + ++A  L+ EM+  G  PN++T +T++    K G++D
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + ++  G + D VLY T+I  +   G +   K L  E+       N +     +
Sbjct: 232 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R G+ +EA  V     + G   D+  +  +I+   ++ +  + +++   M   G  
Sbjct: 292 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351

Query: 433 PDSHIIALVLNSYGK 447
           P +    ++L+   K
Sbjct: 352 PSNVTYNVLLSGLCK 366



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 85/179 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+ F Y++++    + +   +A GLF EMR  G+ P  + Y+TL+    KEG  + A 
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S  Q+M       D++ ++ +I+   K  D+     +  ++   G+ PD + ++T+IN  
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            K     EA+  +E M   G  PD + Y +LL          E +++  +M      LD
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 229/493 (46%), Gaps = 6/493 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP + +YN ++  + +AK+ + A GL  EM   G  P+  T +TL+    K+G  D A+ 
Sbjct: 30  SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 89

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M++     D+VLY  LI       +  +   +F  +   GI  ++V Y+ +++   
Sbjct: 90  LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 149

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +   +KEA  ++  M E G+ PD V+Y+ L++   ++ +   A+ +   M E        
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N+++    +  +  DA ++   M + G    VV+YNTL++   +     EA+ LF  M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269

Query: 256 QRKE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
              E  +E NV T+N +I    K     KA  + ++M  +G   N +TY+ ++    KAG
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 329

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K+  A  L++++   G   +   Y  +I  + ++ ++  AK L  E+R     P      
Sbjct: 330 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 389

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  L + G +E+A  +F++  +A    DI  F  MI+   +   +  V E+  KM   
Sbjct: 390 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 449

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  PD+   + ++N   KL E + A      M   G      V+  +L    ++ D   +
Sbjct: 450 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509

Query: 490 ESLFERLDSDSNI 502
            +L  ++ +   +
Sbjct: 510 INLLHQMAAKGTV 522



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 41/365 (11%)

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  LI EM  + V PD VSY+TL+N   +  K  EA+ +  EM    C  +  TC  ++
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 75

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D   +     +A  L  +M+K G D  VV Y TL+  +           LF  M  K I 
Sbjct: 76  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            NVVTY+ ++    +  + ++A  ++  M   GI P+ +TY+ +I    K G+   A  L
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL------------------------ 357
              +   G E   V Y  ++    + GLV  A ++L                        
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 358 -----------------HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
                                +PN       I  L + GR+ +A  + R+    G   ++
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  ++    +  K    +E+++++   G+ P+S   +++++ + K+R    A  L+ E
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 461 MQEEG 465
           M+  G
Sbjct: 376 MRTHG 380



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 85/179 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+ F Y++++    + +   +A GLF EMR  G+ P  + Y+TL+    KEG  + A 
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S  Q+M       D++ ++ +I+   K  D+     +  ++   G+ PD + ++T+IN  
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            K     EA+  +E M   G  PD + Y +LL          E +++  +M      LD
Sbjct: 466 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 211/423 (49%), Gaps = 5/423 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+VF YN+++  + +    E A GLF+EM+ RG+ PD  TY+++I  +GK G  D 
Sbjct: 127 AGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDD 186

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            + + ++M+      D++ Y+ LI    K     K +  F  +K SG+ P++V+Y+T+++
Sbjct: 187 TVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVD 246

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  + ++A     +MR  G+ P+  +Y++L++ Y +     +A  +  EM++V    
Sbjct: 247 AFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEW 306

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   +ID    ++  K+A+ LF  M   G+ P++ SY  L+  + +A+    A+ L 
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+ + I+ +++ Y T I       + E A  +M EMQ +GI+ N   Y+T++  + K+
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR-QPNTIP 367
                   L +++    +E+  V +  +I    +  LV+ A     R+ ++   Q N   
Sbjct: 427 ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI 486

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L +  ++E AT +F Q    G V D + +  +I+   +       + + +KM 
Sbjct: 487 YTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMA 546

Query: 428 SAG 430
             G
Sbjct: 547 EIG 549



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 212/449 (47%), Gaps = 15/449 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +  R  P   + N +L    R  + +     F +M   G  P  +TY+ +I C  KEG  
Sbjct: 90  KRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDI 149

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           ++A    ++M+   +  D V Y+++I+   K+      +  F  +KS    PD++ YNT+
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL 209

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F K     +      EM++ G+KP+ VSYSTL++ + +     +AL  + +M  +  
Sbjct: 210 INCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL 269

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T   ++D Y ++    DA RL   M ++G++ +VV+Y  L+    + E   EA  
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M    +  N+ +Y  +I  + K+   ++A  L+ EM+ RGI+P+ + Y T I  W 
Sbjct: 330 LFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI--WS 387

Query: 311 KAG--KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             G  K++ A ++  +++  G++ +  +Y T++ AY +      ++ L            
Sbjct: 388 LCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS--ENPSEGLHLLEEMLELDIE 445

Query: 369 ETAITI------LARAGRIEEATWVF-RQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            TA+T       L +   + +A   F R + D G   + +++  MI+   +  +      
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
           +FE+M   G  PD      +++  GKL++
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLID--GKLKQ 532



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 227/481 (47%), Gaps = 7/481 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    ++ +   ++    +E A   F +M++  + P   + + L+  F + G  D    +
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M        +  Y+ +I+   K  D   A  +F  +K  G++PD V YN+MI+ +GK
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +     EEM+    +PD ++Y+TL+N + +  K  + L  F EM +     ++ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++D + + DM + A + +  MR++G+ P+  +Y +L+  Y +     +A  L   M 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +E NVVTY  +I         ++A  L  +M   G+ PN  +Y+ +I  + KA  +D
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           RA  L  +++  G++ D +LY T I +   +  +  AK +++E+++     NT    T +
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GY 431
               ++    E   +  +  +         F  +I+   +NK  +  I+ F ++ +  G 
Sbjct: 421 DAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 480

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
             ++ I   +++   K  + E A  L+ +M ++G V  D+  +  L + G  K  N++++
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLV-PDRTAYTSL-IDGKLKQGNVVQA 538

Query: 492 L 492
           L
Sbjct: 539 L 539



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/192 (19%), Positives = 79/192 (41%), Gaps = 37/192 (19%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +LD +       P +  Y   + ++   ++ E A  + +EM+++GI  + + Y+TL
Sbjct: 361 RALELLDEMKGRG-IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419

Query: 61  ITCF-----------------------------------GKEGMFDSAISWLQQMEQD-R 84
           +  +                                    K  +   AI +  ++  D  
Sbjct: 420 MDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 479

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  +  +Y+ +I+   K      A ++F ++   G+VPD  AY ++I+   K     +A 
Sbjct: 480 LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQAL 539

Query: 145 LLIEEMREQGVK 156
            L ++M E GV+
Sbjct: 540 ALRDKMAEIGVE 551



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  ++  + +  Q E A  LF++M Q+G+ PDR  Y++LI    K+G    A++   +M 
Sbjct: 487 YTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMA 546

Query: 82  QDRVS-----GDLVLYSNLIELARKLS 103
           +  V      GDL    N I+L+ ++ 
Sbjct: 547 EIGVESGARFGDLC--QNTIKLSLRMG 571


>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 696

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 180/369 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  ++    + A  +  EM + G+ PD  TYS LI  +   G ++SA   
Sbjct: 325 PRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIV 384

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME   V  +  +YS ++   R   ++ K+  +   +KS+G+ PD   YN MI+ FGK
Sbjct: 385 LKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGK 444

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    E M  +G++PDTV+++TL+N + ++ +   A  +F EM +      +TT
Sbjct: 445 YNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITT 504

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI+  G+    +        M+  G+ P+ ++Y TL+ VYG++  F +AI    +++
Sbjct: 505 YNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLK 564

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               +     YN +I  Y +    E A N  + M   G+ P+ +  +++I  +G+  +  
Sbjct: 565 STGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDA 624

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  + Q ++ + +E D V Y T++ A  RV        +  E+      P   A  +L 
Sbjct: 625 EAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLR 684

Query: 377 RAGRIEEAT 385
            A R  + T
Sbjct: 685 SALRYMKQT 693



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 203/491 (41%), Gaps = 41/491 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI--S 75
           +   YN ++    R    E A  L  +MR+ G  PD   YS++I    +    DS I   
Sbjct: 184 TPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQK 243

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              ++E D++  D  L +++I    K  D ++A+   +  +S+G+ P       +I   G
Sbjct: 244 LYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALG 303

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    EA  L EE+RE G +P T +Y+ LL  YV+     +A  V +EM +     D  
Sbjct: 304 NSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQ 363

Query: 196 TCNIMIDVYGQLD---------------------------MAKDADRLFWS--------M 220
           T +++ID Y                               +A   D+  W         M
Sbjct: 364 TYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDM 423

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G+ P    YN ++  +G+      A+  F  M  + I  + VT+NT+I  + KS  H
Sbjct: 424 KSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRH 483

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A  L  EMQ RG  P   TY+ +I   G+  + ++ ++   K++S G+  + + Y T+
Sbjct: 484 NMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTL 543

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           +  Y + G  + A   L  L+     P  T     I   A+ G  E A   FR     G 
Sbjct: 544 VDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGL 603

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              +     +I  F  +++ A    V + M+     PD      ++ +  ++ +F+    
Sbjct: 604 TPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPA 663

Query: 457 LYSEMQEEGCV 467
           +Y EM   GC 
Sbjct: 664 VYEEMVTSGCT 674



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 194/400 (48%), Gaps = 4/400 (1%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           +  G+ P   T   +I   G  G    A +  +++ ++        Y+ L++   K    
Sbjct: 284 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSL 343

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
             A  + S ++ +G+ PD   Y+ +I+ +  A  ++ AR++++EM    V+P++  YS +
Sbjct: 344 KDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRI 403

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L  Y +  ++ ++  V  +M       D    N+MID +G+ +    A   F  M   GI
Sbjct: 404 LASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGI 463

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P  V++NTL+  + ++     A  LF  MQ++     + TYN MI   G+    E+ + 
Sbjct: 464 RPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSL 523

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
            + +MQ++G+ PN+ITY+T++ ++GK+G+   A    + L+S+G +    +Y  +I AY 
Sbjct: 524 FLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYA 583

Query: 346 RVG---LVAHAKRLL-HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G   L  +A RL+  E   P+ +   + I       R  EA  V +   +     D+ 
Sbjct: 584 QRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVV 643

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +  +++   R +K+  V  V+E+M ++G  PD    A++
Sbjct: 644 TYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAML 683



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 197/434 (45%), Gaps = 13/434 (2%)

Query: 57  YSTLITCFGK-EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           YS LI   G+ E ++++ +     + Q +V   L  Y+ LI    +  D  KA+++ S++
Sbjct: 158 YSILINALGRSEKLYEAFL-----LSQRQVLTPLT-YNALIGACARNGDVEKALNLMSKM 211

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVENH 173
           +  G  PD V Y+++I    ++       L  L  E+    ++ D    + ++  + +  
Sbjct: 212 RRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAG 271

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               A+   A           +T   +I   G      +A+ LF  +R+ G +P   +YN
Sbjct: 272 DPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYN 331

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            LL+ Y +     +A  +   M++  ++ +  TY+ +I  Y  +   E A  +++EM+  
Sbjct: 332 ALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS 391

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            +EPN+  YS I+A +   G+  ++  + + ++S+GV+ D   Y  MI  + +   + HA
Sbjct: 392 NVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHA 451

Query: 354 ----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
               +R+L E  +P+T+   T I    ++GR   A  +F +    G    I+ +  MI  
Sbjct: 452 MATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINS 511

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
               +++  V     KM+S G  P+S     +++ YGK   F  A +    ++  G   +
Sbjct: 512 MGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPT 571

Query: 470 DQVHFQMLSLYGAR 483
             ++  +++ Y  R
Sbjct: 572 STMYNALINAYAQR 585



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 142/306 (46%), Gaps = 11/306 (3%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L QR+ +    +TYN +I    ++ + EKA NLM +M+
Sbjct: 158 YSILINALGRSEKLYEA---FLLSQRQVL--TPLTYNALIGACARNGDVEKALNLMSKMR 212

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G +P+ + YS+II    ++ K+D   +  L+ ++ +  +EID  L   +I+ + + G 
Sbjct: 213 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGD 272

Query: 350 VAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A R L   +     P+ +     I  L  +GR  EA  +F +  + G       +  
Sbjct: 273 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNA 332

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++ + +     +   V  +M  AG  PD    +L++++Y     +E+A  +  EM+   
Sbjct: 333 LLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASN 392

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              +  V+ ++L+ Y  + ++     + + + S+     +  ++V+   + + N L+ A 
Sbjct: 393 VEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAM 452

Query: 526 RIMNRM 531
               RM
Sbjct: 453 ATFERM 458


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 204/432 (47%), Gaps = 4/432 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G   +AI
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI 195

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ MEQ     ++V++S LI+   K    ++A +IFS + + GI P++V YN++I+  
Sbjct: 196 RLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 255

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   +K    L+ EM +  + PD  + +T+++   +     EA  V   M       ++
Sbjct: 256 CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D +   +    A ++F +M       +V+SYNTL+  Y + +   +A++LF  
Sbjct: 316 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 375

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R+E+  N VTYNT+I         + A +L  EM  RG  P+ +TY T+     K   
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           LD+A  L + +  S  + D  +Y T++    R G +  A+ L   L     QPN      
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + G + EA+ +F +    G   +   +  +   F RN +    IE+ E+M + G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 431 YFPDSHIIALVL 442
           +  D     L++
Sbjct: 556 FSVDVSTTTLLV 567



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 207/453 (45%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+   +V+ ++    + + A     ++ + G  PD  T++TLI     EG    A+  
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M  +    ++V Y  LI    K+ + S AI +   ++     P++V ++T+I+   K
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK 222

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +   EA  +  EM  +G+ P+ V+Y++L++   +  ++    ++  EM +     D+ T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +  M  +A  +   M   G++P+VV+YN L+  +        A+ +F  M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K+   NV++YNT+I  Y K    +KA  L +EM  + + PN +TY+T+I      G+L 
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAI 372
            A  LF ++ + G   D V Y+T+     +   +  A  LL  +   N  P      T +
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + RAG +E+A  +F      G   ++  +  MI    +    A   ++F +M   G  
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+     L+   + +  E     +L  EM   G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 205/458 (44%), Gaps = 4/458 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + K       L  +M   GI PD YT + +I         D A S 
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P++V Y T+IN   K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +P+ V +STL++   ++ +  EA ++F+EM       ++ T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I    +L   K    L   M    I P V + NT++    +  +  EA  +  +M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E NVVTYN ++  +    E + A  +   M ++    N I+Y+T+I  + K   +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+++    +  + V Y T+I     VG +  A  L HE+    + P+ +   T  
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +++A  + +    +    DI ++  +++   R  +  +  ++F  + S G  
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
           P+     ++++   K      A  L+SEM + GC  +D
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 187/435 (42%), Gaps = 39/435 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+S   +M   +     V ++ L+    K   +S  +S+  ++ S GI PD+     
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN          A   + ++ + G +PD  +++TL+       K  EAL +F +M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ T   +I+   ++     A RL  SM +    P+VV ++TL+    +     EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN----------------- 292
           ++F  M  K I  N+VTYN++I    K  E +  T LM EM +                 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 293 ------------------RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                             RG+EPN +TY+ ++       ++D A  +F  +       + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL-RQ---PNTIPRETAITILARAGRIEEATWVFRQ 390
           + Y T+I  Y ++  V  A  L  E+ RQ   PNT+   T I  L   GR+++A  +F +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G++ D+  +  + +   +N+     + + + +  + + PD  I   +L+   +  E
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 451 FETADDLYSEMQEEG 465
            E A DL+S +  +G
Sbjct: 471 LEDARDLFSNLSSKG 485



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 160/347 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN ++  + +  +W+    L +EM    I PD +T +T++    KEGM   A  
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M    V  ++V Y+ L++     ++   A+ +F  +     V ++++YNT+IN + 
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L EEM  Q + P+TV+Y+TL++      +  +A+S+F EM       DL 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   + D   +      A  L  ++     DP +  Y T+L     A    +A  LF  +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K ++ NV TYN MI    K     +A+ L  EM   G  PN  TY+ I   + +  + 
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            R   L +++ + G  +D      ++      GL    K++L +  Q
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 140/307 (45%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +++  P VF  N V+  + +      AH + D M  RG+ P+  TY+ L+         D
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     M       +++ Y+ LI    K+    KA+ +F  +    + P+ V YNT+I
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        ++A  L  EM  +G  PD V+Y TL +   +N    +A+++   +   N  
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+     ++D   +    +DA  LF ++   G+ P+V +YN ++    +  L  EA  L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +     N  TYN + + + ++ E  +   L++EM  RG   +  T + ++ +   
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572

Query: 312 AGKLDRA 318
            G LD++
Sbjct: 573 DG-LDQS 578



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L  I E + + P +  Y  +L  + RA + E A  LF  +  +G+ P+ +TY+ +
Sbjct: 438 KAMALLKAI-EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           I    K+G+   A     +M ++  S +   Y NLI
Sbjct: 497 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY-NLI 531


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 204/432 (47%), Gaps = 4/432 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G   +AI
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI 195

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ MEQ     ++V++S LI+   K    ++A +IFS + + GI P++V YN++I+  
Sbjct: 196 RLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 255

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   +K    L+ EM +  + PD  + +T+++   +     EA  V   M       ++
Sbjct: 256 CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D +   +    A ++F +M       +V+SYNTL+  Y + +   +A++LF  
Sbjct: 316 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 375

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R+E+  N VTYNT+I         + A +L  EM  RG  P+ +TY T+     K   
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           LD+A  L + +  S  + D  +Y T++    R G +  A+ L   L     QPN      
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + G + EA+ +F +    G   +   +  +   F RN +    IE+ E+M + G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 431 YFPDSHIIALVL 442
           +  D     L++
Sbjct: 556 FSVDVSTTTLLV 567



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 207/453 (45%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+   +V+ ++    + + A     ++ + G  PD  T++TLI     EG    A+  
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M  +    ++V Y  LI    K+ + S AI +   ++     P++V ++T+I+   K
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK 222

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +   EA  +  EM  +G+ P+ V+Y++L++   +  ++    ++  EM +     D+ T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +  M  +A  +   M   G++P+VV+YN L+  +        A+ +F  M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K+   NV++YNT+I  Y K    +KA  L +EM  + + PN +TY+T+I      G+L 
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAI 372
            A  LF ++ + G   D V Y+T+     +   +  A  LL  +   N  P      T +
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + RAG +E+A  +F      G   ++  +  MI    +    A   ++F +M   G  
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+     L+   + +  E     +L  EM   G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 205/458 (44%), Gaps = 4/458 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + K       L  +M   GI PD YT + +I         D A S 
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P++V Y T+IN   K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +P+ V +STL++   ++ +  EA ++F+EM       ++ T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I    +L   K    L   M    I P V + NT++    +  +  EA  +  +M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E NVVTYN ++  +    E + A  +   M ++    N I+Y+T+I  + K   +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+++    +  + V Y T+I     VG +  A  L HE+    + P+ +   T  
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +++A  + +    +    DI ++  +++   R  +  +  ++F  + S G  
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
           P+     ++++   K      A  L+SEM + GC  +D
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 187/435 (42%), Gaps = 39/435 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+S   +M   +     V ++ L+    K   +S  +S+  ++ S GI PD+     
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN          A   + ++ + G +PD  +++TL+       K  EAL +F +M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ T   +I+   ++     A RL  SM +    P+VV ++TL+    +     EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN----------------- 292
           ++F  M  K I  N+VTYN++I    K  E +  T LM EM +                 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 293 ------------------RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                             RG+EPN +TY+ ++       ++D A  +F  +       + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL-RQ---PNTIPRETAITILARAGRIEEATWVFRQ 390
           + Y T+I  Y ++  V  A  L  E+ RQ   PNT+   T I  L   GR+++A  +F +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G++ D+  +  + +   +N+     + + + +  + + PD  I   +L+   +  E
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 451 FETADDLYSEMQEEG 465
            E A DL+S +  +G
Sbjct: 471 LEDARDLFSNLSSKG 485



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 158/342 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN ++  + +  +W+    L +EM    I PD +T +T++    KEGM   A  
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M    V  ++V Y+ L++     ++   A+ +F  +     V ++++YNT+IN + 
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L EEM  Q + P+TV+Y+TL++      +  +A+S+F EM       DL 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   + D   +      A  L  ++     DP +  Y T+L     A    +A  LF  +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K ++ NV TYN MI    K     +A+ L  EM   G  PN  TY+ I   + +  + 
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
            R   L +++ + G  +D      ++      GL    K++L
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 140/307 (45%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +++  P VF  N V+  + +      AH + D M  RG+ P+  TY+ L+         D
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     M       +++ Y+ LI    K+    KA+ +F  +    + P+ V YNT+I
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        ++A  L  EM  +G  PD V+Y TL +   +N    +A+++   +   N  
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+     ++D   +    +DA  LF ++   G+ P+V +YN ++    +  L  EA  L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +     N  TYN + + + ++ E  +   L++EM  RG   +  T + ++ +   
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572

Query: 312 AGKLDRA 318
            G LD++
Sbjct: 573 DG-LDQS 578



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 161/350 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V  ++ ++ ++ + +Q   A  +F EM  +GI+P+  TY++LI    K   +
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + + +M   ++  D+   + +++   K    ++A  +   +   G+ P++V YN +
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++          A  + + M  +    + +SY+TL+N Y +     +A+ +F EM+    
Sbjct: 322 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +I     +   +DA  LF  M   G  P +V+Y TL     +     +A+ 
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++    + ++  Y T++    ++ E E A +L   + ++G++PN  TY+ +I    
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G L  A+ LF ++  +G   +   Y  +   + R         LL E+
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L  I E + + P +  Y  +L  + RA + E A  LF  +  +G+ P+ +TY+ +
Sbjct: 438 KAMALLKAI-EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           I    K+G+   A     +M ++  S +   Y NLI
Sbjct: 497 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY-NLI 531


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P+VF+YN++L+ +    + + A  L   M   G    PD  +Y+T+I  F KEG  D A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    +  ++V Y+++I    K     KA+ + + +  +G++P+   YN++++ +
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +   KEA   +++M   GV+PD V+Y++L++   +N +  EA  +F  M +     ++
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   ++  Y       +   L   M + GI P+   ++ L+  Y +     +A+ +F  
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  + VTY T+I I  KS   E A    ++M +  + P  I Y+++I       K
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            D+A  L  ++   G+ +D + + ++I ++ + G V  +++L   +     +PN I   T
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M S+G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD     ++L    + R    A +LY  + E G
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 213/490 (43%), Gaps = 39/490 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  V+    +    + A+G + EM  RGI P+  TY+++I    K    D A+  
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEV 256

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  +   Y++++          +AI    ++ S G+ PD+V YN++++   K
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G+KP+  +Y TLL  Y      VE   +   M       +   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I  Y +      A  +F  MR+ G++P  V+Y T++ +  ++    +A+  F  M 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +    + YN++I       + +KA  L+ EM +RGI                     
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +PN ITYST+I  +  AGK+D A  L   + S G++ D V Y T+I
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+      P+ I     +  L +  R   A  ++    ++G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++S +  ++    +N      + +F+ +       ++    +++ +  K+   + A DL
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 458 YSEMQEEGCV 467
           ++ +   G V
Sbjct: 677 FAALSANGLV 686



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 195/440 (44%), Gaps = 11/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P+  TY  LI      G  D   
Sbjct: 53  SIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGF 111

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                  +EA  L++ M + G    PD VSY+T++N + +     +A   + EM +    
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGIL 231

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N +I    +      A  +  SM K G+ P+  +YN+++  Y  +    EAI  
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M    +E +VVTYN+++    K+    +A  +   M  RG++P   TY T++  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G L     L   +  +G+  +  ++  +I AY + G V  A  +  ++RQ    P+T+ 
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL ++GR+E+A   F Q  D        V+  +I       K+    E+  +M 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 428 SAGYFPDSHIIALVLNSYGK 447
             G   D+     +++S+ K
Sbjct: 472 DRGICLDTIFFNSIIDSHCK 491



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + +++++    +  + + A  +F +MRQ+G+ PD  TY T+I    K G  + A+ +
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 77  LQQMEQDRVSGDLVLYSNLI-------------ELARKLSDYSKAIS------------- 110
            +QM  +R+S   ++Y++LI             EL  ++ D    +              
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 111 ---------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                    +F  +   G+ P+++ Y+T+I+ +  A    EA  L+  M   G+KPD V+
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+N Y +  +  +AL +F EM       D+ T NI++    Q      A  L+  + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G    + +YN +L    +  L  EA+ +F+ +   +++    T+N MI    K   ++
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671

Query: 282 KATNLMQEMQNRGIEPNAITYS 303
           +A +L   +   G+ P+  TYS
Sbjct: 672 EAKDLFAALSANGLVPDVRTYS 693



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 165/369 (44%), Gaps = 43/369 (11%)

Query: 106 SKAISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           + A+S ++R+  +G   + P+L  Y  +I     A         +  + ++G + D +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + LL     + +  +A+                                  D +   M +
Sbjct: 130 TPLLKGLCADKRTSDAM----------------------------------DIVLRRMTQ 155

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEH 280
           +G  P+V SYN LL+   +     EA+ L ++M     +   +VV+Y T+I  + K  + 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +KA     EM +RGI PN +TY++IIA   KA  +D+A  +   +  +GV  +   Y ++
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y   G    A   L ++     +P+ +   + +  L + GR  EA  +F      G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +I+ +G +++ ++       +  + + M   G  P+ ++ ++++ +Y K  + + A  
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 457 LYSEMQEEG 465
           ++S+M+++G
Sbjct: 396 VFSKMRQQG 404



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP    YN ++ ++    +W+ A  L  EM  RGI  D   ++++I    KEG   
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +      M +  V  +++ YS LI+   LA K+ + +K   + + + S G+ PD V YN
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK---LLASMVSVGMKPDCVTYN 553

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+IN + K    ++A +L  EM   GV PD ++Y+ +L    +  +   A  ++  + E 
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L+L+T NI++    + ++  +A R+F ++    +     ++N ++    +     EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             LF  +    +  +V TY+ M +   +    E+  +L   M+  G   N+   ++I+  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 309 WGKAGKLDRAA 319
             + G + RA 
Sbjct: 734 LLQRGDITRAG 744



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/193 (19%), Positives = 90/193 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +  L +E   L   M E G   ++   ++++   ++      A +    ++E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 191 PLDLTTCNIMIDV 203
            L+ +T ++ +D+
Sbjct: 756 SLEASTASLFLDL 768


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 221/486 (45%), Gaps = 45/486 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           SW  +M     S ++V Y+ L+    K     +A  IF+R+  +G  P+ + Y+ +++  
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403

Query: 135 GKAKLFKEA-----RLL-----------IEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA   ++A     +L+            E      + P+ V+Y  L++   + HK V+A
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +   M    C  +    + +ID + ++    +A  +F  M K G  P+V +Y +L+  
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +      A+ +   M       NVVTY  MI    +  E +KA  L+  M+ +G  PN
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPN 583

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +TY+ +I   GK+GK+D +  LF ++ + G   + V Y+ +I      GL+  A  LL 
Sbjct: 584 VVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 643

Query: 359 ELRQ---PNTIPRETAIT------ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           E++Q   P  +    ++        +A  G +EE           G V    V+G +I+ 
Sbjct: 644 EMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELE-------SHGTVPIAPVYGLLIDN 696

Query: 410 FSRNKKYANVIEVFEKMR--------SAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           FS+  +    +E+ ++M         ++     S I AL L S     + E A +LYSE+
Sbjct: 697 FSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLAS-----QLEKAFELYSEI 751

Query: 462 QEEGCV 467
             +G V
Sbjct: 752 TRKGVV 757



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 217/485 (44%), Gaps = 31/485 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q ++   +  EM + G   D++T         KEG +  A 
Sbjct: 36  YRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA- 94

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++    D VL + +I    + S + +AIS   R++ +  +P++V Y T++  F
Sbjct: 95  --LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGF 152

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M ++G  P+   +++L++ Y     +  A  +   M +  CP   
Sbjct: 153 LKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGY 212

Query: 195 TTCNIMI-DVYG-----QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + G       D+   A++++  M       + V+     R       F  A
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMA 272

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + ++M  K    +  TY+ +I    ++++ EKA  L QEM++ G+ P+  TY+ +I  
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDS 332

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK----RLLHELRQPN 364
           + KAG +++A   F ++RS G   + V Y  ++ AY +   +  A     R++     PN
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGE----------------VKDISVFGCMIE 408
           TI     +  L +AG I++A  V+ +     +                  ++  +G +I+
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALID 452

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  K  +  E+ + M S G  P+  I   +++ + K+ + + A +++  M +  C +
Sbjct: 453 GLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK--CGY 510

Query: 469 SDQVH 473
              VH
Sbjct: 511 LPTVH 515



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 222/526 (42%), Gaps = 33/526 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWE------LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P   AYN+ + ++   ++        LA  +++EM       ++   +    C    G F
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   ++ M       D   YS +I    +     KA  +F  +KS G+ PD+  Y  +
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA L ++AR   +EMR  G   + V+Y+ LL+ Y++  +  +A  +F  M +  C
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAI 249
           P +  T + ++D                 + K G I  +   Y  L+   G ++  G   
Sbjct: 390 PPNTITYSALVD----------------GLCKAGEIQKACEVYTKLI---GTSDNVGSDF 430

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           + F       I  NVVTY  +I    K+ +   A  L+  M + G EPN I Y  +I  +
Sbjct: 431 Y-FEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            K GK+D A  +F ++   G       Y ++I A  +   +  A ++L ++ +    PN 
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNV 549

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I  L R G  ++A  +     + G   ++  +  +I+   ++ K    +++F +
Sbjct: 550 VTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQ 609

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M + G  P+     +++N        + A  L SEM++    +   +      + G  K 
Sbjct: 610 MSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT--YWPKYLQGYCSVVQGFSKK 667

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           F     L E L+S   +    ++ ++   + +A RL +A  +   M
Sbjct: 668 FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 140/317 (44%), Gaps = 5/317 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++    +  + + A  +F  M + G  P  +TY++LI    K+   D A+  
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKV 536

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + ++V Y+ +I+   ++ +  KA+ + S ++  G  P++V Y  +I+  GK
Sbjct: 537 LSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGK 596

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +     +  L  +M  +G  P+ V+Y  L+N         EA S+ +EM +   P  L  
Sbjct: 597 SGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQG 656

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++  + +  +A     L   +   G  P    Y  L+  + +A    EA+ L + M 
Sbjct: 657 YCSVVQGFSKKFIASLG--LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMM 714

Query: 257 RKEIEQNVVT---YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                 N+ +   Y ++I+    + + EKA  L  E+  +G+ P    +  +I    K  
Sbjct: 715 ELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVN 774

Query: 314 KLDRAAMLFQKLRSSGV 330
           K + A  L   +   GV
Sbjct: 775 KWNEALQLCYSICDEGV 791



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 148/362 (40%), Gaps = 13/362 (3%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           LK  G  P    YN ++ V   A        + +EM E G   D  +         +  +
Sbjct: 31  LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           + +AL V  E  +    LD   C  MI    +  +  +A      MR     P+VV+Y T
Sbjct: 91  WSDAL-VMIEREDFK--LDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL  + + +  G    +  +M ++    N   +N+++  Y  + ++  A  L++ M + G
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAML------FQKLRSSGVEIDPVLYQTMIVAYERVG 348
             P  + Y+  I       +L    +L      ++++ +S   ++ V           +G
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267

Query: 349 LVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
               A    K ++ +   P+T      IT L  A ++E+A  +F++    G   D+  + 
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+ F +          F++MRS G   +      +L++Y K ++   A D+++ M + 
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 465 GC 466
           GC
Sbjct: 388 GC 389



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  +P+V  Y  ++  + R  + + A  L   M ++G +P+  TY+ LI   GK G  D
Sbjct: 542 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            ++    QM     + + V Y  LI          +A S+ S +K +     L  Y +++
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVV 661

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F K   F  +  L+EE+   G  P    Y  L++ + +  +  EAL +  EM E++  
Sbjct: 662 QGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSS 719

Query: 192 LDLTTCNIMIDVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           L++T+ ++   +   L +A   ++   L+  + + G+ P +  +  L++   +   + EA
Sbjct: 720 LNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779

Query: 249 IHL 251
           + L
Sbjct: 780 LQL 782



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 5/219 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   SP+V  Y  ++  + ++ + +L+  LF +M  +G AP+  TY  LI      G+ 
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S L +M+Q      L  Y ++++   K   +  ++ +   L+S G VP    Y  +
Sbjct: 636 DEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLL 693

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVS---YSTLLNLYVENHKFVEALSVFAEMNE 187
           I+ F KA   +EA  L +EM E     +  S   Y++L+       +  +A  +++E+  
Sbjct: 694 IDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITR 753

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                +L+    +I    +++   +A +L +S+   G++
Sbjct: 754 KGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 210/434 (48%), Gaps = 8/434 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  +N ++  +    +   A  L ++M  +G+  D  TY T++    K G   
Sbjct: 3   EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA++ L +ME+  +  D+V+YS +I+   K   +S A  +FS +   GI P++  YN MI
Sbjct: 63  SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F     + +A+ L+ +M E+ + PD ++++ L++  V+  K  EA  +  EM      
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T N MI  + + +   DA  +F  M      P VV++NT++ VY  A+   E + L
Sbjct: 183 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 238

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R + R+ +  N  TYNT+I  + +      A +L QEM + G+ P+ IT + ++  + +
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             KL+ A  LF+ ++ S +++D V Y  +I    +   V  A  L   L     +P+   
Sbjct: 299 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 358

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I+       I +A  +F +  D G   D S +  +I    +  +    IE+  +MR
Sbjct: 359 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 418

Query: 428 SAGYFPDSHIIALV 441
           S G+  D+  I +V
Sbjct: 419 SNGFSGDAFTIKMV 432



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 175/352 (49%), Gaps = 4/352 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  Y+ ++  + +      A  LF EM ++GIAP+ +TY+ +I  F   G +
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L+ M +  ++ D++ ++ LI  + K     +A  +   +    I PD V YN+M
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 191

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F K   F +A+ + + M      PD V+++T++++Y    +  E + +  E++    
Sbjct: 192 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             + TT N +I  + ++D    A  LF  M   G+ P  ++ N LL  + E E   EA+ 
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 307

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF ++Q  +I+ + V YN +I    K  + ++A +L   +   G+EP+  TY+ +I+ + 
Sbjct: 308 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 367

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
               +  A +LF K++ +G E D   Y T+I    + G +  +  L+ E+R 
Sbjct: 368 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 419



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 205/425 (48%), Gaps = 8/425 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M + G+ P   T++TLI     EG    A + + +M    +  D+V Y  ++    K+ D
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              A+++ S+++ + I PD+V Y+ +I+   K     +A+ L  EM E+G+ P+  +Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++ +    ++ +A  +  +M E     D+ T N +I    +     +A++L   M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P  V+YN+++  + +   F +A H+F LM   +    VVT+NT+I +Y ++   ++  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGM 236

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L++E+  RG+  N  TY+T+I  + +   L+ A  LFQ++ S GV  D +    ++  +
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 345 ERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
                +  A  L   ++      +T+     I  + +  +++EA  +F      G   D+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  MI  F      ++   +F KM+  G+ PD+     ++    K  E + + +L SE
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 461 MQEEG 465
           M+  G
Sbjct: 417 MRSNG 421



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 5/307 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  +N ++   ++  +   A  L DEM  R I PD  TY+++I  F K   FD
Sbjct: 143 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 202

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M     S D+V ++ +I++  +     + + +   +   G+V +   YNT+I
Sbjct: 203 DAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 258

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F +      A+ L +EM   GV PDT++ + LL  + EN K  EAL +F  +      
Sbjct: 259 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 318

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD    NI+I    +     +A  LF S+   G++P V +YN ++  +       +A  L
Sbjct: 319 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 378

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+    E +  TYNT+I+   K+ E +K+  L+ EM++ G   +A T   ++A    
Sbjct: 379 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLIT 437

Query: 312 AGKLDRA 318
            G+LD++
Sbjct: 438 DGRLDKS 444



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 175/382 (45%), Gaps = 8/382 (2%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P ++ +NT+IN         EA  L+ +M  +G+  D V+Y T++N   +      A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L++ ++M E +   D+   + +ID   +     DA  LF  M + GI P+V +YN ++  
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +     + +A  L R M  +EI  +V+T+N +I    K  +  +A  L  EM +R I P+
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +TY+++I  + K  + D A  +F  + S     D V + T+I  Y R   V    +LL 
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+ +     NT    T I        +  A  +F++    G   D      ++  F  N+
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           K    +E+FE ++ +    D+    ++++   K  + + A DL+  +   G     Q + 
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 475 QMLSLYGARKDFNMLESLFERL 496
            M+S +  +   +    LF ++
Sbjct: 361 VMISGFCGKSAISDANVLFHKM 382


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 218/459 (47%), Gaps = 4/459 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV++    RA   E A  L D M  +GI P   TY++++    + G +D A   
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M+   V+ D+  ++ LI    +  +  +A+  +  ++   + PD+V+++ +I +F +
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EMRE G+ PD V Y+ ++  +      +EAL V  EM    C  D+ T
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +     DA+ L   M++ G+ P + ++ TL+  Y       +A+  F  + 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  ++VTYNT+I    +  +  KA  L  +M +R I PN +TYS +I    + G++D
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A     ++ + G+  + + Y ++I  Y R G V+  ++ L ++R     P+ I   T I
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               + G++ EA  + +   +     D   +  +I  FS +        V++KM + G  
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           PD +    ++N +      + +  L+ EM ++G    D+
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 206/422 (48%), Gaps = 37/422 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V ++N+++    RA + E A   + EMR R + PD  ++S LI  F + G  D A  
Sbjct: 261 APDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAE 320

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M +  +  D V+Y+ +I    +     +A+ +   + + G +PD+V YNT++N   
Sbjct: 321 YLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC 380

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L+ EM+E+GV PD  +++TL++ Y  +    +AL  F  +++     D+ 
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440

Query: 196 TCNIMID-VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T N +ID +  Q D+ K A+ L+  M    I P+ V+Y+ L+  + E      A      
Sbjct: 441 TYNTLIDGMCRQGDLGK-ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K I  N++TYN++IK Y +S    K    + +M++  + P+ ITY+T+I  + K GK
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +  A  L + + +  V+ D V Y  MI++    G   H                      
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYN-MIIS----GFSVH---------------------- 592

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMI--ELFSRNKKYANVIEVFEKMRSAGYF 432
               G ++EA WV+++    G   D   +  MI   + + N K +   ++ ++M   G  
Sbjct: 593 ----GNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKS--FQLHDEMLQKGLA 646

Query: 433 PD 434
           PD
Sbjct: 647 PD 648



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 131/280 (46%), Gaps = 4/280 (1%)

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           N  ++  T NIM+  Y +     + D +   M K  + P VV++N ++     A     A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + L   M  K I+  +VTYN+++K   ++   +KA  + + M   G+ P+  +++ +I  
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + +AG+L+ A   ++++R   V  D V +  +I  + R G + HA   L E+R+    P+
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     I    RAG + EA  V  +    G + D+  +  ++    + ++ ++  E+  
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLN 393

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           +M+  G  PD      +++ Y +    E A   +  + ++
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++   D I+++ R  P +  YN ++  + R      A+ L+D+M  R I P+  TYS L
Sbjct: 422 KALQFFDTISDQ-RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    ++G  D+A ++L +M    +  +++ Y+++I+   +  + SK      +++   +
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PDL+ YNT+I+ + K     EA  L++ M  + V+PD V+Y+ +++ +  +    EA  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           V+ +M       D  T   MI+ +     +K + +L   M + G+ P
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 39/287 (13%)

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           +RL+     E N  T N M+  Y K+L+  +   ++ EM+ R + P+ +T++ ++    +
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG ++ A  L   + S G++   V Y +++    R G    A+ +   +      P   +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             +L     RAG +EEA   +++        D+  F C+I LF+R  +  +  E   +MR
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PD  I  +V+  + +      A  +  EM   GC+  D V +  L L G  K+  
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL-PDVVTYNTL-LNGLCKE-- 382

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                                           RL+DA  ++N M +R
Sbjct: 383 -------------------------------RRLSDAEELLNEMKER 398


>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 799

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 222/472 (47%), Gaps = 7/472 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ + +W+  +  Y      YN ++    R ++ + A GLF EM+     PD  TY+ L+
Sbjct: 70  SLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALM 129

Query: 62  TCFGKEGMFDSAISWLQQMEQ--DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
              G+ G +  A+     M Q    ++     Y+NLI        + KA+ I  R+  +G
Sbjct: 130 NVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNG 189

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + PDL+ YN +++ F      + A    + +  + V  D  S++ +LN   +  +F +A+
Sbjct: 190 VGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAI 249

Query: 180 SVFAEMNEVN-CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           ++F EM ++N C  D+ T N ++ VY        A   F  M   G+ P++V++NTLL  
Sbjct: 250 NLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGA 309

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           Y    ++ EA+ +  L+ + + E +VV+Y++++  +GK+   EKA  +   M+ R  +PN
Sbjct: 310 YASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPN 369

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +T++ ++  +  AGK +RA  L   +  + +E + V   ++  A  R       + + H
Sbjct: 370 LVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFH 429

Query: 359 E--LRQP--NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E  +RQ   N      AIT    AG+ +EA  +     +     +   F  +I       
Sbjct: 430 EAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLG 489

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            Y     +++KM   G        + ++N++ K   +  A  ++ +M++ GC
Sbjct: 490 DYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGC 541



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/521 (21%), Positives = 235/521 (45%), Gaps = 3/521 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  YN++L       Q   A   +D +  + +  DRY+++ ++ C  K G F+ AI+
Sbjct: 191 GPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAIN 250

Query: 76  WLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             ++M + +    D+V ++ L+ +       +KA   F  +   G+ P +V +NT++  +
Sbjct: 251 LFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAY 310

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
               ++ EA  ++  + +   +PD VSYS+LLN + +     +A  VF  M + +   +L
Sbjct: 311 ASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNL 370

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y      + A  L   M +  I+P+VV+  +L      A    +   +F  
Sbjct: 371 VTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHE 430

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            + ++I  NV  +N  I  Y ++ + ++A  L++ M+ + + PN +T+  +I   G  G 
Sbjct: 431 AKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGD 490

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  L+ K+   G+ +       +I A+ + G+   A+ +  ++R+          T 
Sbjct: 491 YREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTS 550

Query: 375 LARAGRI-EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           L  A R+ ++A     +   AG   D   FG +    ++  +   V+++ +  R+ G   
Sbjct: 551 LMIAYRMYDDAQLACEEMVAAGITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILF 610

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D       L +  +L+++ETA  LY  M++     ++ +   +LS  G     + L  +F
Sbjct: 611 DDVAYTETLLACSRLKDWETALFLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVF 670

Query: 494 ERLDSDSN-INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             L      +   ++++++   Y R  +      ++  + K
Sbjct: 671 LELQQQIGFVPTLQMYNILIDSYSRGLKWRKCLEVLGCIKK 711



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/490 (22%), Positives = 219/490 (44%), Gaps = 45/490 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N +L       Q   A   FD M   G+AP   T++TL+  +  +GM+  A+  
Sbjct: 263 PDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQV 322

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  + + +   D+V YS+L+    K     KA  +F  +K     P+LV +N +++ +  
Sbjct: 323 VGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYAS 382

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTL------------------------------- 165
           A  ++ AR L+ +M E  ++P+ V+  +L                               
Sbjct: 383 AGKYERARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPA 442

Query: 166 ----LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
               +  Y+E  +F EA ++   M E N   +  T  ++I+  G L   ++A  L+  M 
Sbjct: 443 FNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMV 502

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            +GI  +V   + L+  + +  ++ EA  +F  M++   + NVVTY +++  Y     ++
Sbjct: 503 DLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRM---YD 559

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A    +EM   GI P++I + T+     KA + ++   + +  R+ G+  D V Y   +
Sbjct: 560 DAQLACEEMVAAGITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETL 619

Query: 342 VAYERV-----GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ-AFDAG 395
           +A  R+      L  +       LR  NT+     ++ + R+G+++    VF +     G
Sbjct: 620 LACSRLKDWETALFLYEGMKKRRLRLTNTMVINL-LSAVGRSGKLDRLHKVFLELQQQIG 678

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            V  + ++  +I+ +SR  K+   +EV   ++     P+      +L+   +L  +ET  
Sbjct: 679 FVPTLQMYNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYL 738

Query: 456 DLYSEMQEEG 465
           ++Y E+  +G
Sbjct: 739 EIYGEVLAQG 748



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 160/374 (42%), Gaps = 39/374 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EAR  P+V     +     RA+  E    +F E + R IA +   ++  IT + + G FD
Sbjct: 398 EARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFD 457

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A + L+ ME+  +  + V +  LI  A  L DY +A +++ ++   GI   +   + +I
Sbjct: 458 EAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALI 517

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F K  ++ EAR + ++MR+ G K + V+Y++L+  Y     + +A     EM      
Sbjct: 518 NAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAY---RMYDDAQLACEEMVAAGIT 574

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D      +     + + ++   ++  S R  GI    V+Y   L      + +  A+ L
Sbjct: 575 PDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFL 634

Query: 252 FRLMQRK------------------------------EIEQNV------VTYNTMIKIYG 275
           +  M+++                              E++Q +        YN +I  Y 
Sbjct: 635 YEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYS 694

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           + L+  K   ++  ++   +EPN  TY  I++   +    +    ++ ++ + G+E D  
Sbjct: 695 RGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPDYN 754

Query: 336 LYQTMIVAYERVGL 349
           + +  + AY  +G+
Sbjct: 755 ILKISVTAYTSLGM 768



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 10/294 (3%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + EE    P+   + +++        +  A  L+D+M   GI       S LI  F K G
Sbjct: 465 VMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHG 524

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           M++ A +    M +     ++V Y++L+   R   D   A      + ++GI PD +A+ 
Sbjct: 525 MYNEARTIFDDMRKAGCKANVVTYTSLMIAYRMYDDAQLAC---EEMVAAGITPDSIAFG 581

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+     KA   ++   + +  R +G+  D V+Y+  L        +  AL ++  M + 
Sbjct: 582 TLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKKR 641

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRL---FWSM-RKMGIDPSVVSYNTLLRVYGEAEL 244
              L   T  ++I++   +  +   DRL   F  + +++G  P++  YN L+  Y     
Sbjct: 642 RLRL---TNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLK 698

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + + + +   +++  +E N  TY  ++    +    E    +  E+  +G+EP+
Sbjct: 699 WRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPD 752



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 37/231 (16%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN MI ++ +    ++A  L  EM+    +P+  TY+ ++ + G+AG+   A  +F    
Sbjct: 90  YNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIF---- 145

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
                 D +L     +A                   P+       I     +G+  +A  
Sbjct: 146 ------DDMLQAPKPIA-------------------PSRSSYNNLINACGSSGQWFKALE 180

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           + ++  D G   D+  +  ++  F    +  + +  ++ + S     D +   ++LN   
Sbjct: 181 ICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLT 240

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQML----SLYG----ARKDFNML 489
           KL  FE A +L+ EM++      D V F  L    +L G    A++ F+M+
Sbjct: 241 KLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMM 291


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 7/445 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  + +N+++  + +    + A  + D M + G  PD YTY++LI+   K G  D A+
Sbjct: 297 FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAV 356

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L QM +   S + V Y+ +I    K +   +A  +   L   GI+PD+  YN++I   
Sbjct: 357 KVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             ++    A  L +EM+ +G  PD  +Y+ L++      K  EAL++  EM    C  ++
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNV 476

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID + +     +A+ +F  M   G+  + V+YNTL+    ++E   EA  L   
Sbjct: 477 ITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + +  +  TYN+++  + K+ + +KA +++Q M + G EP+ +TY T+IA   KAG+
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  L + ++  G+ + P  Y  +I A  R      A RL  E+ +    P      I
Sbjct: 597 VEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKI 656

Query: 375 LAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + R      G I EA     +  + G V + S F  + E          +I++ + +   
Sbjct: 657 VFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEK 716

Query: 430 GYFPDSHIIALVLNSYGKLREFETA 454
             F D+ +   ++  + K+ +++ A
Sbjct: 717 AKFSDNEVT--MIRGFLKISKYQDA 739



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 192/398 (48%), Gaps = 6/398 (1%)

Query: 43  DEMRQR-GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           +EM  R G  PD+YT++ L+    K G    A+  +  M ++    D+  Y++LI    K
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L +  +A+ + +++      P+ V YNT+I+   K    +EA  L   +  +G+ PD  +
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++L+     +     A+ ++ EM    C  D  T N++ID        ++A  L   M 
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G   +V++YNTL+  + + +   EA  +F  M+ + + +N VTYNT+I    KS   E
Sbjct: 469 VSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVE 528

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A+ LM +M   G+ P+  TY++++  + KAG + +AA + Q + S G E D V Y T+I
Sbjct: 529 EASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLI 588

Query: 342 VAYERVGLVAHAKRLLH--ELRQPNTIPR--ETAITILARAGRIEEATWVFRQAFDAGEV 397
               + G V  A +LL   +++  N  P      I  L R  R +EA  +FR+  +  E 
Sbjct: 589 AGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEA 648

Query: 398 KDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPD 434
            D   +  +   L          ++   +M   GY P+
Sbjct: 649 PDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/530 (21%), Positives = 241/530 (45%), Gaps = 12/530 (2%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W +++  + PS   +  VL  + +A +++    +  EM+      D  +    I  +   
Sbjct: 78  WASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASF 137

Query: 68  GMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G+++  + ++  ME +  V  +   Y+ L+ +    +         S + S GI PD+  
Sbjct: 138 GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           +N +I    +A   + A LL+EEM + G+ PD  +++T++  ++E      A+ V  +M 
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR-KMGIDPSVVSYNTLLRVYGEAELF 245
           E  C +   T N++++ + +    ++A R    M  + G  P   ++N L+    +    
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A+ +  +M R+  + ++ TYN++I    K  E ++A  ++ +M  R   PN +TY+TI
Sbjct: 318 KHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLHELRQP 363
           I+   K  +++ A  L   L   G+  D   Y ++I  +   R   V  A  L  E++  
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV--AMELYKEMKTK 435

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P E    +L  +    G+++EA  + ++   +G  +++  +  +I+ F +NK+ A  
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E+F++M   G   +S     +++   K    E A  L  +M  EG       +  +L+ 
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555

Query: 480 YGARKDFNMLESLFERLDSD-SNINKKELHHVVAGIYERANRLNDASRIM 528
           +    D      + + + SD    +      ++AG+  +A R+  A++++
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC-KAGRVEAATKLL 604


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 5/466 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+++ +N ++    +      A     ++ Q G+ PD +TY++LI    +    D+A  
Sbjct: 191 SPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M Q     + V Y+NLI    +    ++A+ +F+ +      P +  Y  +I    
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    EA  L  EM+E+G +P+  +Y+ L++   + +K  EA  + +EM+E      + 
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID Y +  M  DA  +   M      P+  +YN L+    +     +A+ L   M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +++  +++TYN++I    K  + E A  L+  M   G+ P+  TYS  I    K G++
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETA 371
           + A  LF  +++ GV+ + V+Y  +I  Y +VG +  A    +R+L++   PN+      
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L +  +++EA+ +  +    G    +  +  +I    ++  + + ++VF  M S GY
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            PD       L++Y      E  DD+ ++M EEG +  D V + +L
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG-ILPDLVTYTVL 655



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 216/513 (42%), Gaps = 61/513 (11%)

Query: 1   RSVAILDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R V  L+  NE  E    P+V  Y V++  + +  + + A  +  EM ++G+ P   TY+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 59  TLITCFGKEGMFDSAISWLQQMEQD----------------------------------- 83
            LI  + KEGM D A   L  ME +                                   
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
           ++S  L+ Y++LI    K++D   A  + S +  +G+VPD   Y+  I+   K    +EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
             L + ++ +GVK + V Y+ L++ Y +  K   A S+   M    C  +  T N++I+ 
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
             +    K+A  L   M  MG+ P+VV+Y  L+    +   F  A+ +F  M     + +
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V TY   +  Y      E+  +++ +M   GI P+ +TY+ +I  + + G   RA    +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 383
            +  +G +  P LY   I+           K L HE R   T   E  I  ++    ++ 
Sbjct: 674 CMVDTGCK--PSLYIVSILI----------KNLSHENRMKET-RSEIGIDSVSNVNSVDI 720

Query: 384 A-TW----------VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           A  W          +F +  + G   D+S++G +I  F + ++      +   M+  G  
Sbjct: 721 ADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 780

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P   I   +L+   KL  +  A  L   M E G
Sbjct: 781 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/523 (22%), Positives = 228/523 (43%), Gaps = 16/523 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  Y V++  +  + +   A  LF+EM+++G  P+ +TY+ LI    KE   D
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M +  +   +V Y+ LI+   K      A  I   ++S+   P+   YN +I
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K +   +A  L+ +M E+ + P  ++Y++L++   + +    A  + + MNE    
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T ++ ID   +    ++A  LF S++  G+  + V Y  L+  Y +      A  L
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       N  TYN +I+   K  + ++A++L+ +M   G++P  +TY+ +I    K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G  D A  +F  + S G + D   Y   + AY   G++     ++ ++ +   +P    
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            T+L    AR G    A    +   D G    + +   +I+  S   +        E   
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK------ETRS 705

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G    S++ ++ +    K  E+E A  L+ +M E GC     ++  +++ +  ++   
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765

Query: 488 MLESLFERLDSDSNINKKELHHVV------AGIYERANRLNDA 524
             + L   +        +++++ +       G+Y  A RL DA
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA 808



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 29/319 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YNV++  + + K+ + A  L  +M   G+ P   TY+ LI    K+G FD A+  
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M       D+  Y+  +          +   + +++   GI+PDLV Y  +I+ + +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENH---------------------- 173
             L   A   ++ M + G KP     S L+ NL  EN                       
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIA 721

Query: 174 ---KFVE---ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              K +E   AL +F +M E  C +D++    +I  + Q +  ++A  L   M++ G+ P
Sbjct: 722 DVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 781

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           S   YN+LL    +  ++ EA+ L   M    +   + +Y  ++        +EKA  + 
Sbjct: 782 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841

Query: 288 QEMQNRGIEPNAITYSTII 306
             + + G   + + +  +I
Sbjct: 842 HGLLSCGYNYDEVAWKVLI 860



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 73/145 (50%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           +V + +V +  ++E+A  LF++M + G   D   Y  LI  F ++   + A   +  M++
Sbjct: 717 SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 776

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +S    +Y++L++   KL  Y++A+ +   +  +G++P L +Y  ++         ++
Sbjct: 777 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 836

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ +   +   G   D V++  L++
Sbjct: 837 AKAVFHGLLSCGYNYDEVAWKVLID 861


>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
 gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
          Length = 1139

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 215/453 (47%), Gaps = 38/453 (8%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV  Y+++L+   R KQ  LA   F EM  + + PD   +ST+I  +   
Sbjct: 261 WMKLQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANA 320

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
            MFD                                   + ++++  + S GIVP  V Y
Sbjct: 321 EMFD-----------------------------------EMLTMYEAMMSRGIVPSSVTY 345

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            TM+    KA+   +A LL E++ E+ V+   ++Y+ ++ +Y +  +F EAL VF  M  
Sbjct: 346 TTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLG 405

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D    N+++ + G+L    +A  +F +M++  +  S  SY T+L +  +A+ F  
Sbjct: 406 AGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFEL 465

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  MQ K    + V Y ++I IYGK+  +++A  L QEM    +  +  T+S +  
Sbjct: 466 AASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMAN 525

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PN 364
           +  KAGK + A  + ++L + G+ +D + ++T++  Y + G V  A +    L +    +
Sbjct: 526 VRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIAD 585

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     +++ A    +E+A  +F+Q   +    D   FG M++L+      A   EV  
Sbjct: 586 LMAYNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLR 645

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           +MR  G+ PD     +++N+YG+    E A  L
Sbjct: 646 QMREKGFTPDHITQGILINAYGEANRIEEAAGL 678



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/585 (22%), Positives = 247/585 (42%), Gaps = 105/585 (17%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            S ++Y  +L    +A ++ELA  +F +M+ +    D   Y+++I+ +GK G++D A    
Sbjct: 446  SKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLF 505

Query: 78   QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            Q+M + R+  D+  +S +  +  K   Y++A+ +   L + G+  D +A+ T+++ + KA
Sbjct: 506  QEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKA 565

Query: 138  KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               + A    + + E G+  D ++Y+ +L+LY E     +A  +F ++   +   D    
Sbjct: 566  GNVERATKTFKTLVESGIA-DLMAYNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWF 624

Query: 198  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL------ 251
              M+ +Y   +M   A+ +   MR+ G  P  ++   L+  YGEA    EA  L      
Sbjct: 625  GTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAK 684

Query: 252  -----------------FRLMQR---------KEIEQNVVTYNTMIKIYGKSLEHEKATN 285
                             FRL  +         +    +   YN +   + K+ +   A  
Sbjct: 685  EDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVLPAEM 744

Query: 286  LMQEMQNRGIEPNAITYSTIIAIWGKAGK------------------------------L 315
            L   MQ++G +    T   +IA +GKAG+                              L
Sbjct: 745  LHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTRLKPELPRNNFVYSSMVGALINCNQL 804

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG-----------------------LVAH 352
            + AA L +K+R  G++ D VL   ++ AY + G                       +VA+
Sbjct: 805  EEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGEQKIFSFSGRWYPAGYCCLQHDHIVAY 864

Query: 353  AKRLLHELR-------------------QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
               +  +LR                   +P+    +T I++ A++GR  +A  +F+    
Sbjct: 865  NTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKS 924

Query: 394  AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            AG   D  V+  M+  ++++  Y +  ++FE M+  G  P       ++++Y +  +F  
Sbjct: 925  AGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAK 984

Query: 454  ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            A+ L  EM + GC  S      ++S Y  R   N  E+  ER+ +
Sbjct: 985  AEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQT 1029



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 133/599 (22%), Positives = 257/599 (42%), Gaps = 84/599 (14%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D + E    SP   AY +++    +  ++E A  +F+ M   G  PD   Y+ ++   GK
Sbjct: 367 DLVEESVELSP--LAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGK 424

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G +D A+     M++  +      Y+ ++ +  K   +  A SIFS ++      D V 
Sbjct: 425 LGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVV 484

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y ++I+++GKA L+ EA  L +EM E  +  D  ++S + N+ ++  K+ EA+ V  E+ 
Sbjct: 485 YTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELL 544

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                LD      ++  Y +    + A + F ++ + GI   +++YN +L +Y E ++  
Sbjct: 545 AKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGI-ADLMAYNDVLSLYAEFDMLE 603

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  LF+ ++   I+ + V + TM+K+Y  +     A  ++++M+ +G  P+ IT   +I
Sbjct: 604 DAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILI 663

Query: 307 AIWGKAGKLDRAAMLFQKL----RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             +G+A +++ AA L +       S    I  +        +++  L+ H  R+L     
Sbjct: 664 NAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLH--RVLESFTL 721

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY------ 416
            +    +  I  L +AG++  A  +  +  D G   + S  G +I  + +  +Y      
Sbjct: 722 DSAAYNQLTINFL-KAGQVLPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTRL 780

Query: 417 --------------------ANVIE----VFEKMRSAGYFPDSHIIALVLNSYGKLRE-- 450
                                N +E    + EKMR  G   DS +++++LN+Y K  E  
Sbjct: 781 KPELPRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGEQK 840

Query: 451 ------------------------------------FETADDLYSEMQEEGCVFSDQVHF 474
                                                + A D YS +   G   S Q + 
Sbjct: 841 IFSFSGRWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYD 900

Query: 475 QMLSLYGARKDFNMLESLFERLDS-----DSNINKKELH-HVVAGIYERANRLNDASRI 527
            M+S++         E +F+ L S     D  +  + ++ +  +G+YE A  L +A ++
Sbjct: 901 TMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKL 959



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 159/347 (45%), Gaps = 12/347 (3%)

Query: 20   FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG---MFDSAISW 76
            F Y+ ++  ++   Q E A GL ++MRQ G+  D    S L+  + K G   +F  +  W
Sbjct: 789  FVYSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGEQKIFSFSGRW 848

Query: 77   LQQ----MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                   ++ D +    V Y+ +I+   +     KAI  +S L + G+ P L  Y+TMI+
Sbjct: 849  YPAGYCCLQHDHI----VAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMIS 904

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            VF K+   ++A  + ++++  G +PD   YS ++N Y ++  +  A  +F  M       
Sbjct: 905  VFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRP 964

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
               + N +ID Y +      A++L   M K G  PS V++  L+  Y       EA +  
Sbjct: 965  HEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENAL 1024

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              MQ   I   V  YN ++  + ++    +A     +M+  GI+P+ ++  T+I I  + 
Sbjct: 1025 ERMQTAAIRPTVRHYNEVMLAFSRARLPRQAMESYLKMERSGIQPDVVSSRTMIRILLEG 1084

Query: 313  GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
               +    L++K  +  V  D +  + +   Y+  G    AK +L +
Sbjct: 1085 SMFEEGLSLYKKTEAKLVS-DSLSREMVAKLYQGAGKHFEAKYILRQ 1130



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 136/296 (45%), Gaps = 36/296 (12%)

Query: 19   VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
            + AYN +++  LR  + + A   +  +   G+ P   TY T+I+ F K G          
Sbjct: 861  IVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSG---------- 910

Query: 79   QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
                                  +  D  K   +F  LKS+G  PD   Y+ M+N + K+ 
Sbjct: 911  ----------------------RTRDAEK---MFKDLKSAGFQPDEKVYSQMMNCYAKSG 945

Query: 139  LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +++ A  L E M+ +G++P  VSY+ L++ Y    +F +A  +  EM +  CP    T  
Sbjct: 946  MYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFL 1005

Query: 199  IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            ++I  Y       +A+     M+   I P+V  YN ++  +  A L  +A+  +  M+R 
Sbjct: 1006 LLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPRQAMESYLKMERS 1065

Query: 259  EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
             I+ +VV+  TMI+I  +    E+  +L ++ + + +  ++++   +  ++  AGK
Sbjct: 1066 GIQPDVVSSRTMIRILLEGSMFEEGLSLYKKTEAKLVS-DSLSREMVAKLYQGAGK 1120



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 118/273 (43%), Gaps = 36/273 (13%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            PS+  Y+ ++    ++ +   A  +F +++  G  PD   YS ++ C+ K GM++ A   
Sbjct: 894  PSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADL 953

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M+   +    V Y+NLI+   +   ++KA  +   +  +G  P  V +  +I+ +  
Sbjct: 954  FEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAH 1013

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 EA   +E M+   ++P    Y                       NEV        
Sbjct: 1014 RGKCNEAENALERMQTAAIRPTVRHY-----------------------NEV-------- 1042

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                +  + +  + + A   +  M + GI P VVS  T++R+  E  +F E + L++  +
Sbjct: 1043 ----MLAFSRARLPRQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLYKKTE 1098

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
             K +  + ++   + K+Y  + +H +A  ++++
Sbjct: 1099 AKLVSDS-LSREMVAKLYQGAGKHFEAKYILRQ 1130



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 85/172 (49%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            + A + P    Y+ ++    ++  +E A  LF+ M+ RG+ P   +Y+ LI  + + G F
Sbjct: 923  KSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQF 982

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A   L +M +       V +  LI         ++A +   R++++ I P +  YN +
Sbjct: 983  AKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEV 1042

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
            +  F +A+L ++A     +M   G++PD VS  T++ + +E   F E LS++
Sbjct: 1043 MLAFSRARLPRQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLY 1094


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 5/421 (1%)

Query: 15  YSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           Y P V +YN V+  +LR  +Q + A+ LFD+M  +G++PD  TY+++I+   K    D A
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              L +M ++    + + +++L+         + AI +F R+   G+ PD+  YNT++  
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K     EAR + + M ++G KP++ +Y TLL+ Y      V+   +   M       D
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               NI+I  Y +     DA  LF  MR+ G++P  V+Y  ++          +A+  F 
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  + +  + V +  +I       + +KA  L  EM  RGI PN I ++T++    K G
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
            + RA  +F  +    V+ D + Y T+I  Y   G V  A +LL  +     +PN +   
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    + GRIE+A  +FRQ    G    I  +  +++   + ++ A   E++  M  +
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617

Query: 430 G 430
           G
Sbjct: 618 G 618



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 210/474 (44%), Gaps = 28/474 (5%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGL-FDEMRQRGIAPDRYTYSTLITCFGK 66
           W  E   +SP       +L+ +   K+   A  +    M   G  P+ ++Y+ L+     
Sbjct: 122 WTAEAITFSP-------LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCD 174

Query: 67  EGMFDSAISWLQQM--EQDRVSG---DLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGI 120
           E     A+  L  M    D   G   D+V Y+ +I  L R+      A  +F ++   G+
Sbjct: 175 ENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGL 234

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+V YN++I+   KA+   +A +++  M + G  P+ +++++LL+ Y  + K  +A+ 
Sbjct: 235 SPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIG 294

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VF  M       D+ T N ++    +   + +A ++F SM K G  P+  +Y TLL  Y 
Sbjct: 295 VFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA 354

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                 +  HL  +M R  I+ +   +N +I  Y K  + + A  L  +M+ +G+ P+ +
Sbjct: 355 TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV 414

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK------ 354
           TY  ++      GK+D A   F +L S G+  D V+++ +I      GL A  K      
Sbjct: 415 TYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLI-----HGLCARDKWDKAEE 469

Query: 355 ---RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
               ++     PN I   T +  L + G +  A  +F         +D+  +  +I+ + 
Sbjct: 470 LAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYC 529

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + K     ++ E M   G  P+      ++N Y K    E A  L+ +M  +G
Sbjct: 530 LHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 207/464 (44%), Gaps = 26/464 (5%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           +++ AR+SP+V A ++  R V+ A+                + P+  TYS +I C  + G
Sbjct: 61  LSDAARHSPAV-AISLFRRMVMVARPK--------------VPPNLITYSVVIDCCSRVG 105

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAY 127
             D A + L ++ +   + + + +S L++        S+A+ I   R+   G  P++ +Y
Sbjct: 106 HLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSY 165

Query: 128 NTMINVFGKAKLFKEARLLIEEM-----REQGVKPDTVSYSTLLN-LYVENHKFVEALSV 181
             ++         ++A  L+  M        G  PD VSY+T++N L  E  +   A  +
Sbjct: 166 TILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHL 225

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M +     D+ T N +I    +      A  +   M K G  P+ +++N+LL  Y  
Sbjct: 226 FDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCS 285

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           +    +AI +F+ M R  +E +V TYNT++    K+    +A  +   M  RG +PN+ T
Sbjct: 286 SGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSAT 345

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y T++  +   G L +   L   +  +G++ D  ++  +I  Y + G V  A  L  ++R
Sbjct: 346 YGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    P+T+     +  L   G++++A   F +    G   D  VF  +I       K+ 
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              E+  +M   G  P++     +LN   K      A +++  M
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 158/353 (44%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+   Y  +L            H L D M + GI PD Y ++ LI  + K G  D A+
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M +  ++ D V Y  +++    +     A++ F RL S G+ PD V +  +I+  
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                + +A  L  EM  +G+ P+ + ++TLLN   +      A ++F  M  V+   D+
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID Y       +A +L   M   G+ P+ V+YNT++  Y +     +A  LFR 
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +   +VTY+T+++   ++     A  L   M   GI+ +  TY+ I+    +   
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            D A  +FQ L      ++   +  MI A  + G    AK L   L     +P
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 35/321 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + +N+++    +  + + A  LF +MR++G+ PD  TY  ++      G  D A++ 
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------------- 122
             ++  + ++ D V++ NLI        + KA  +   +   GI P              
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 123 ---------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                D++ YNT+I+ +       EA  L+E M   GVKP+ V+
Sbjct: 496 EGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T++N Y +N +  +A S+F +M        + T + ++    Q      A  L+  M 
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI 615

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K GI   + +YN +L    +     +A+ +F+ +   +      T+N MI    K   H+
Sbjct: 616 KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675

Query: 282 KATNLMQEMQNRGIEPNAITY 302
           +A +L   +  RG+ PN +TY
Sbjct: 676 EAKDLFASLLARGLVPNVVTY 696



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 11/251 (4%)

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PN ITYS +I    + G LD A     ++  SG   + + +  ++ A       + A 
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 355 RL-LHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVK-----DISVFG 404
            + L  +      P   + TIL +      R ++A  +      A + +     D+  + 
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206

Query: 405 CMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            +I  L    ++      +F++M   G  PD      ++++  K R  + A  +   M +
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
            G + +   H  +L  Y +    N    +F+R+  D        ++ + G   +  R  +
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326

Query: 524 ASRIMNRMNKR 534
           A +I + M KR
Sbjct: 327 ARKIFDSMVKR 337


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 228/486 (46%), Gaps = 6/486 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN++++   R KQ++ A  L + M ++G +PD ++Y TLI    K G    A+ 
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK 205

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVF 134
              +M +  V+ D+  Y+ LI+   K  D   A  I+ RL K   + P++ +YN MIN  
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 265

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F E+  +   M++     D  +YSTL++    +     A  V+ EM E     D+
Sbjct: 266 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 325

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N M++ Y +    ++   L+  M K G   +VVSYN L+R   E     EAI ++ L
Sbjct: 326 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWEL 384

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  K+   + +TY  ++    K+    KA ++++E +N   + +   YS++I    + G+
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           LD  A +  ++   G + +P +   +I  + R   +  A R    +      P  +   T
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L++A R  EA  + ++    G   ++  +  ++    + KK    + ++ +    G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + PD  +  ++++      + E A  LYSEM++  CV +   H  ++  +   +DF    
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 491 SLFERL 496
            +++ +
Sbjct: 625 KIWDHI 630



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/578 (21%), Positives = 248/578 (42%), Gaps = 46/578 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +++I D +     YS + + ++ +L+ +   K       + + +R +          T+I
Sbjct: 26  ALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVI 85

Query: 62  TCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             + K  M D A+   Q+M +       +  Y++L+    + + + +A S F   ++ G+
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 145

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+L  YN +I +  + K F +A+ L+  M EQG  PD  SY TL+N   +N    +AL 
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK 205

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQ----LDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +F EM E     D+   NI+ID + +    L+ ++  +RL   ++   + P++ SYN ++
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL---LKGPSVYPNIPSYNVMI 262

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +   F E+  ++  M++ E  Q++ TY+T+I     S   + AT + +EM   G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI------------------------ 332
           P+ + Y+T++  + +AG+++    L++ +   G                           
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 382

Query: 333 ----------DPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARA 378
                     D + Y  ++    + G +  A  +L E        +T    + I  L R 
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR++E   V  Q    G   +  V   +I  F R  K  + +  F  M S G FP     
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             ++N   K   F  A  L  EM  +G   +   +  +++     K  +M  +L+ +   
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
                  ++H+++      + ++ DA ++ + M +R+ 
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 185/417 (44%), Gaps = 38/417 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +YNV++  + +  +++ +  ++  M++     D YTYSTLI      G  D A   
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 77  LQQMEQDRVSGDLVLYSNLI---------------------ELARKLSDYS--------- 106
            ++M ++ VS D+V+Y+ ++                     E  R +  Y+         
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN 372

Query: 107 ----KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
               +AISI+  L       D + Y  +++   K     +A  ++EE        DT +Y
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S+++N      +  E   V  +M +  C  +   CN +I+ + +    +DA R F +M  
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P+VV+YNTL+    +AE F EA  L + M  K  + N++TY+ ++    +  + + 
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL  +   +G +P+   ++ II     +GK++ A  L+ +++      + V + T++ 
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLME 612

Query: 343 AYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            + +V     A ++   +     QP+ I     +  L    RI +A      A D G
Sbjct: 613 GFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   E     +V +YN+++R +    + + A  +++ + ++    D  TY  L+    K 
Sbjct: 348 WKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  + A+S L++ E  R   D   YS++I    +     +   +  ++   G  P+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN F +A   ++A      M  +G  P  V+Y+TL+N   +  +F EA ++  EM  
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527

Query: 188 VNCPLDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
                ++ T +++++   Q   LDMA +   L+    + G  P V  +N ++     +  
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALN---LWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A+ L+  M++++   N+VT+NT+++ + K  + E+A+ +   +   G +P+ I+Y+ 
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNI 644

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +       ++  A          GV    + +  ++ A
Sbjct: 645 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRA 683



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 81/158 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++  Y++++  + + K+ ++A  L+ +  ++G  PD   ++ +I      G  + A+
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M+Q +   +LV ++ L+E   K+ D+ +A  I+  +   G  PD+++YN  +   
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
                  +A   + +  ++GV P  ++++ L+   ++N
Sbjct: 650 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P+VF+YN++L+ +    + + A  L   M   G    PD  +Y+T+I  F KEG  D A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    +  ++V YS++I    K     KA+ + + +  +G++P+   YN++++ +
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +   KEA   +++M   GV+PD V+Y++L++   +N +  EA  +F  M +     ++
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   ++  Y       +   L   M + GI P+   ++ L+  Y +     +A+ +F  
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  + VTY T+I I  KS   E A    ++M +  + P  I Y+++I       K
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            D+A  L  ++   G+ +D + + ++I ++ + G V  +++L   +     +P+ I   T
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M S+G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD     ++L    + R    A +LY  + E G
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 213/490 (43%), Gaps = 39/490 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  V+    +    + A+G + EM  RGI P+  TYS++I    K    D A+  
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  +   Y++++          +AI    ++ S G+ PD+V YN++++   K
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G+KP+  +Y TLL  Y      VE   +   M       +   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I  Y +      A  +F  MR+ G++P  V+Y T++ +  ++    +A+  F  M 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +    + YN++I       + +KA  L+ EM +RGI                     
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +P+ ITYST+I  +  AGK+D A  L   + S G++ D V Y T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+      P+ I     +  L +  R   A  ++    ++G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++S +  ++    +N      + +F+ +       ++    +++ +  K+   + A DL
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 458 YSEMQEEGCV 467
           ++ +   G V
Sbjct: 677 FAALSANGLV 686



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 4/396 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S LI    K     +A+ +FS+++  G+ PD V Y T+I +  K
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A    E+M ++ + P  + Y++L++      K+ +A  +  EM +    LD   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++Y+TL+  Y  A    EA  L   M 
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             L + GR +EA  +F      G V D+  +  M E
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 195/440 (44%), Gaps = 11/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P+  TY  LI      G  D   
Sbjct: 53  SIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGF 111

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                  +EA  L++ M + G    PD VSY+T++N + +     +A   + EM +    
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGIL 231

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T + +I    +      A  +  SM K G+ P+  +YN+++  Y  +    EAI  
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M    +E +VVTYN+++    K+    +A  +   M  RG++P   TY T++  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G L     L   +  +G+  +  ++  +I AY + G V  A  +  ++RQ    P+T+ 
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL ++GR+E+A   F Q  D        V+  +I       K+    E+  +M 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 428 SAGYFPDSHIIALVLNSYGK 447
             G   D+     +++S+ K
Sbjct: 472 DRGICLDTIFFNSIIDSHCK 491



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 165/369 (44%), Gaps = 43/369 (11%)

Query: 106 SKAISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           + A+S ++R+  +G   + P+L  Y  +I     A         +  + ++G + D +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + LL     + +  +A+                                  D +   M +
Sbjct: 130 TPLLKGLCADKRTSDAM----------------------------------DIVLRRMTQ 155

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEH 280
           +G  P+V SYN LL+   +     EA+ L ++M     +   +VV+Y T+I  + K  + 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +KA     EM +RGI PN +TYS+IIA   KA  +D+A  +   +  +GV  +   Y ++
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y   G    A   L ++     +P+ +   + +  L + GR  EA  +F      G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +I+ +G +++ ++       +  + + M   G  P+ ++ ++++ +Y K  + + A  
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 457 LYSEMQEEG 465
           ++S+M+++G
Sbjct: 396 VFSKMRQQG 404



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP    YN ++ ++    +W+ A  L  EM  RGI  D   ++++I    KEG   
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +      M +  V  D++ YS LI+   LA K+ + +K   + + + S G+ PD V YN
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK---LLASMVSVGMKPDCVTYN 553

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+IN + K    ++A +L  EM   GV PD ++Y+ +L    +  +   A  ++  + E 
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L+L+T NI++    + ++  +A R+F ++    +     ++N ++    +     EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             LF  +    +  +V TY+ M +   +    E+  +L   M+  G   N+   ++I+  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 309 WGKAGKLDRAA 319
             + G + RA 
Sbjct: 734 LLQRGDITRAG 744



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/193 (19%), Positives = 90/193 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +  L +E   L   M E G   ++   ++++   ++      A +    ++E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 191 PLDLTTCNIMIDV 203
            L+ +T ++ +D+
Sbjct: 756 SLEASTASLFLDL 768


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 200/456 (43%), Gaps = 4/456 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+V +Y++V+       Q +  + LF EM  RGI PD  TY+T+I    K  +FD A
Sbjct: 194 RCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRA 253

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               QQM  +    +   Y+ LI     +  + + + +   + + G+ PD   Y +++N 
Sbjct: 254 EGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNY 313

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    +EAR   + M  +G+KP   +Y  L++ Y       E  S    M E     D
Sbjct: 314 LCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               NI    Y +  M   A  +F  MR+ G+ P+VV+Y  L+    +     +A   F 
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  + +  N+V +N+++       + E+A  L+ EM ++GI PNA+ ++T+I      G
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++     L   +   GV  D   Y  +I  Y   G    A+++   +      P E    
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            L      A RI++A  +FR+    G    +  +  ++    + K+++   E++  M ++
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D +   ++LN   K    + A  ++  +  +G
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 649



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 4/376 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++            H   D M + G++PD + ++   + + K GM D A+  
Sbjct: 337 PKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 396

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q  +S ++V Y  LI+   KL     A   F+++ + G+ P++V +N+++     
Sbjct: 397 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              ++ A  L+ EM +QG+ P+ V ++TL+       + +E   +   M  V    D  +
Sbjct: 457 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFS 516

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  Y       +A+++F  M  +G+ P+ V+YNTLL  Y  A    +A  LFR M 
Sbjct: 517 YTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 576

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK +   VVTYNT++    ++    +A  L   M N G + +  TY+ I+    K+  +D
Sbjct: 577 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 636

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +FQ L S G++++ + +  MI A  + G    A  L   +      PN +      
Sbjct: 637 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 696

Query: 373 TILARAGRIEEATWVF 388
             L   G +EE   +F
Sbjct: 697 ENLIEEGSLEEFDSLF 712



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 172/374 (45%), Gaps = 1/374 (0%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           + LD + E    SP    +N+      +    + A  +F++MRQ G++P+   Y  LI  
Sbjct: 360 SFLDLMVENG-LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 418

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  D A     QM  + V+ ++V++++L+     +  + +A  +   +   GI P+
Sbjct: 419 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 478

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
            V +NT+I          E R LI+ M   GV+PD  SY+ L++ Y    +  EA  VF 
Sbjct: 479 AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFD 538

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M  +       T N ++  Y       DA  LF  M + G+ P VV+YNT+L    + +
Sbjct: 539 GMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 598

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
            F EA  L+  M     + ++ TYN ++    KS   ++A  + Q + ++G++ N IT++
Sbjct: 599 RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 658

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I    K G+ + A  LF  + ++G+  + V Y+ +       G +     L   + + 
Sbjct: 659 IMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKN 718

Query: 364 NTIPRETAITILAR 377
            T P    +  L R
Sbjct: 719 GTAPNSQMLNALVR 732



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 185/431 (42%), Gaps = 7/431 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y  +L  + +  +   A   FD M ++GI P   TY  LI  +  +G      S+
Sbjct: 302 PDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSF 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +S D  +++       K     KA+ IF++++  G+ P++V Y  +I+   K
Sbjct: 362 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
                +A +   +M  +GV P+ V +++L+       K+  A  +  EM ++  CP +  
Sbjct: 422 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP-NAV 480

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I     +    +  RL   M  +G+ P   SY  L+  Y       EA  +F  M
Sbjct: 481 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGM 540

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +    VTYNT++  Y  +   + A  L +EM  +G+ P  +TY+TI+    +  + 
Sbjct: 541 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 600

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  L+  + +SG + D   Y  ++    +   V  A ++   L     Q N I     
Sbjct: 601 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 660

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L + GR E+A  +F      G V ++  +  + E             +F  M   G 
Sbjct: 661 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 720

Query: 432 FPDSHII-ALV 441
            P+S ++ ALV
Sbjct: 721 APNSQMLNALV 731



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 204/454 (44%), Gaps = 21/454 (4%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGK---EGMFDSAISWLQQMEQ---DRVSGDLVLYSN 94
           LFDE+           ++ L+T   +       + A+S   +M +   D+V+ +L  YS 
Sbjct: 36  LFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSI 95

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQ 153
           LI    ++       + F  +  +G   D +A N ++      K   EA  +L++ M E 
Sbjct: 96  LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN---CPLDLTTCNIMIDVY---GQL 207
           G  PDTVSY+ LL       +  EAL +   M + +   CP ++ + +I+I+ +   GQ+
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQV 215

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           D   +   LF  M   GI P VV+Y T++    +A+LF  A  +F+ M     + N  TY
Sbjct: 216 DKPYN---LFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY 272

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I  Y    + ++   +++EM  RG++P+  TY +++    K G+   A   F  +  
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEE 383
            G++     Y  +I  Y   G ++     L  + +    P      I     A+ G I++
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +F +    G   ++  +G +I+   +  +  +    F +M + G  P+  +   ++ 
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               + ++E A++L  EM ++G +  + V F  L
Sbjct: 453 GLCTVDKWERAEELVYEMLDQG-ICPNAVFFNTL 485



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 87/189 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  YN +L  + + K++  A  L+  M   G   D YTY+ ++    K    D A  
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 640

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q +    +  +++ ++ +I    K      A+ +F+ + ++G+VP++V Y  +     
Sbjct: 641 MFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLI 700

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +    +E   L   M + G  P++   + L+   +       A +  ++++E N  ++ +
Sbjct: 701 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS 760

Query: 196 TCNIMIDVY 204
           T ++++ ++
Sbjct: 761 TTSLLMSIF 769


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 203/458 (44%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
           +  P   AYN ++  ++   Q+E  H L++EM   G   PD  TYS LI+ F K G  DS
Sbjct: 156 KCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDS 215

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI  L +M++  +     +Y+ LI L  K +D   A+S+F  ++     PD+  Y  +I 
Sbjct: 216 AIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIR 275

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    EA     EM+ +G +PDTV  + ++N   +  +  +A+ +F EM  + C  
Sbjct: 276 GLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRC-- 333

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHL 251
                                             PSVV+YNT+++   E++    E    
Sbjct: 334 ---------------------------------IPSVVTYNTIIKALFESKSRASEVPSW 360

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 361 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 420

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A + D A  LFQ+L+ +       +Y  MI    + G +  A  +  E+ +    P+   
Sbjct: 421 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 480

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               ++ LAR G ++EA    R+  + G + DI+ +  ++   ++       +E+   M+
Sbjct: 481 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 540

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +   PD      VL +      FE A  L  EM   G
Sbjct: 541 QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG 578



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 221/500 (44%), Gaps = 19/500 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           ++R    D  TY  LI C      +      +Q+M ++ +   +V  + L ++ R L + 
Sbjct: 82  KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNA 139

Query: 106 S---KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
               +AI+IF ++K+    P   AYN+MI +      +++   L  EM  +G   PDTV+
Sbjct: 140 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 199

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM E+          ++I ++ + + A  A  LF  MR
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                P V +Y  L+R  G+A    EA H F  MQR+    + V  N MI   GK+   +
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            A  L QEM+     P+ +TY+TII A++    +       F++++ SG+      Y  +
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 379

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  + +   +  A  LL E+ +    P   A    I  L +A R + A  +F++  +   
Sbjct: 380 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 439

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+   +  +  + I +F++M   G  PD +    +++   +    + A  
Sbjct: 440 SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 499

Query: 457 LYSEMQEEGCVFSDQVHFQMLS----LYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
               MQE GC+     +  +L+      G  +   ML ++ +       ++    ++ V 
Sbjct: 500 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS----YNTVL 555

Query: 513 GIYERANRLNDASRIMNRMN 532
           G    A    +AS++M  MN
Sbjct: 556 GALSHAGMFEEASKLMKEMN 575



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 197/468 (42%), Gaps = 36/468 (7%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME-QD 83
           V+R +  AK    A  +F +++ R   P    Y+++I     EG ++       +M  + 
Sbjct: 132 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 191

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
               D V YS LI    KL     AI + + +K  G+ P    Y  +I +F K      A
Sbjct: 192 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
             L EEMR Q  +PD  +Y+ L+    +  +  EA   F EM    C  D    N MI+ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHLFRLMQRKEIEQ 262
            G+     DA +LF  M  +   PSVV+YNT+++   E++    E    F  M+   I  
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + D A  LF
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
           Q+L+ +       +Y  MI          H                      L +AGR++
Sbjct: 432 QELKENCGSSSARVYAVMI---------KH----------------------LGKAGRLD 460

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  +F +    G   D+  +  ++   +R       +    +M+  G  PD +   ++L
Sbjct: 461 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 520

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           N   K      A ++ S M+ +  V  D V +   ++ GA     M E
Sbjct: 521 NGLAKTGGPHRAMEMLSNMK-QSTVRPDVVSYN--TVLGALSHAGMFE 565



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 39/340 (11%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R+    P VF Y  ++R + +A + + A+  F EM++ G  PD    + +I   GK 
Sbjct: 256 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 315

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D A+   Q+ME  R    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 316 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 375

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LYVE-- 171
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++             L+ E  
Sbjct: 376 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 435

Query: 172 ---------------NH-----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
                           H     +  +A+++F EMN++ C  D+   N ++    +  M  
Sbjct: 436 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 495

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A      M++ G  P + SYN +L    +      A+ +   M++  +  +VV+YNT++
Sbjct: 496 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 555

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                +   E+A+ LM+EM   G E + ITYS+I+   GK
Sbjct: 556 GALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 2/272 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           E  R  PSV  YN +++ +  +K +       F+ M++ GI+P  +TYS LI  F K   
Sbjct: 329 ETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 388

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A+  L++M++         Y +LI+   K   Y  A  +F  LK +        Y  
Sbjct: 389 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 448

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI   GKA    +A  + +EM + G  PD  +Y+ L++         EALS    M E  
Sbjct: 449 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 508

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D+ + NI+++   +      A  +  +M++  + P VVSYNT+L     A +F EA 
Sbjct: 509 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAS 568

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            L + M     E +++TY+++++  GK ++HE
Sbjct: 569 KLMKEMNTLGFEYDLITYSSILEAIGK-VDHE 599



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 196/439 (44%), Gaps = 19/439 (4%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D  KA+ +        +V +++  +  +NV  K + F+ A       + +  + DT +Y 
Sbjct: 43  DAEKALEVLMLRVDHWLVREVMKTDVGVNV--KMQFFRWAA------KRRNYEHDTSTYM 94

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDADRLFWSM 220
            L++      ++ E   +  EM  V  P+ + T   + DV    G   M + A  +F+ +
Sbjct: 95  ALIHCLEVVEQYGEMWKMIQEM--VRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQI 152

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLE 279
           +     P   +YN+++ +      + +   L+  M  +     + VTY+ +I  + K   
Sbjct: 153 KTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGR 212

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            + A  L+ EM+  G++P    Y+ +IA++ K      A  LF+++R      D   Y  
Sbjct: 213 RDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTE 272

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I    + G +  A     E+++    P+T+     I  L +AGR+++A  +F++     
Sbjct: 273 LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR 332

Query: 396 EVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            +  +  +  +I+ LF    + + V   FE+M+ +G  P S   +++++ + K    E A
Sbjct: 333 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 392

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
             L  EM E+G       +  ++   G  K +++   LF+ L  +   +   ++ V+   
Sbjct: 393 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 452

Query: 515 YERANRLNDASRIMNRMNK 533
             +A RL+DA  + + MNK
Sbjct: 453 LGKAGRLDDAINMFDEMNK 471


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 217/491 (44%), Gaps = 39/491 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V +YN V+    +  + + A+ LF EM  +G+ PD  TY++LI    K    D A++
Sbjct: 197 SPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ M    V  D   Y+ +I     L    +A+ +  ++  SG+ PD+V Y+ +I  + 
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EAR + + M  +G KP++  Y  LL+ Y      ++   +   M     P +  
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I  Y +      A   F  MR+ G+ P VVSY+T++ +  +     +A++ F  M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  N++++ ++I       E +K   L  EM NRGI P+AI  +TI+    K G++
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETA 371
             A   F  +   GV+ D V Y T+I  Y  VG     +    R++    +P++    + 
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556

Query: 372 ITILARAGRIEEATWVFRQAF-----------------------------------DAGE 396
           +    + GR+E+A  ++R+ F                                   D G 
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              I  +  ++     N      + +FE +RS  +  D    ++V+N+  K+   + A  
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 457 LYSEMQEEGCV 467
           L+S M   G V
Sbjct: 677 LFSAMVLRGPV 687



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 221/486 (45%), Gaps = 8/486 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD---RVSGDLVLYSNLIE 97
           +F  M + G  PD ++Y+ LI     E     A+  L  M  D     S ++V Y+ +I+
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K  +  KA  +F  +   G+ PD+V YN++I+   KA+   +A  +++ M ++GV P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           DT +Y+ ++  Y    +  EA+ +  +M+      D+ T +++I  Y ++    +A  +F
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            SM + G  P+   Y+ LL  Y       +   L  LM R  I      +N +I  Y K 
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +KA     EM+  G+ P+ ++YST+I I  K G+++ A   F ++ S G+  + + +
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            ++I     +G     + L  E+      P+ I   T +  L + GR+ EA   F     
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+  +  +I+ +    K    I+  ++M S G  PDS     +LN Y K    E 
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568

Query: 454 ADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           A  LY EM  +   F       ML  L+ A +     E   + +D  + +  +  + V+ 
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628

Query: 513 GIYERA 518
           G+ E +
Sbjct: 629 GLCENS 634



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 184/380 (48%), Gaps = 12/380 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+++L              L D M + GI  +   ++ LI  + K G  D A++ 
Sbjct: 338 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 397

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q+ +  D+V YS +I +  K      A+  F+++ S G+ P+++++ ++I+    
Sbjct: 398 FTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K+   L  EM  +G+ PD +  +T+++   +  + VEA   F  +  +    D+ +
Sbjct: 458 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517

Query: 197 CNIMIDVY---GQLDMA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            N +ID Y   G++D + K  DR    M  +G+ P   +YN+LL  Y +     +A+ L+
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDR----MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALY 573

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M RK+++   +T N M+    ++     A  L  +M +RG +    TY+T++    + 
Sbjct: 574 REMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCEN 633

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
             +D A  +F+ LRS   E+D   +  +I A  +VG +  AK L   +     +P     
Sbjct: 634 SCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITY 693

Query: 373 TILARA----GRIEEATWVF 388
           +++ ++    G +EE+  +F
Sbjct: 694 SLMIKSHIEEGLLEESDNLF 713



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 35/379 (9%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A+N+++    +    + A   F EMRQ G+ PD  +YST+I    K G  + A+    QM
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSK--------------------------------- 107
             + +S +++ +++LI     + ++ K                                 
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 108 --AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
             A   F  +   G+ PD+V+YNT+I+ +       E+   ++ M   G++PD+ +Y++L
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           LN Y +N +  +AL+++ EM   +      T NIM+    Q      A  L+  M   G 
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
              + +YNT+L    E     EA+ +F  ++ KE E +V T++ +I    K    ++A +
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L   M  RG  P+ ITYS +I    + G L+ +  LF  +  +G   D  +   ++    
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLL 736

Query: 346 RVGLVAHAKRLLHELRQPN 364
             G V  A   L ++ + N
Sbjct: 737 EKGDVRRAGTYLTKIDEKN 755



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 201/506 (39%), Gaps = 84/506 (16%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWE-------LAHGLFDEMRQRGIAPDR 54
           ++ + D +  +AR   SV A+N VL  V RA           LA  LF+ M + G+    
Sbjct: 33  ALNLFDELLPQAR-PASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMA 91

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
                LI CF   G  D A +      +   +G  V    L +L + L D ++       
Sbjct: 92  AIIGILIRCFCTVGRLDLAFAAFALFLK---TGWRVQNVTLNQLIKGLCDGNRT------ 142

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
                        + M  VF               M E G  PD  SY+ L+       K
Sbjct: 143 ------------DDAMDMVF-------------RRMPELGYTPDVFSYNALIKGLCVEKK 177

Query: 175 FVEALSVFAEMNE---VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             EAL +   M      NC  ++ + N +ID + +      A  LF  M   G+ P VV+
Sbjct: 178 SQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVT 237

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN+L+    +A+   +A+ + + M  K +  +  TYN MI+ Y    + E+A  L+++M 
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ------------- 338
             G++P+ +TYS +I  + K G+   A  +F  +   G + +  +Y              
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357

Query: 339 ----------------------TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
                                  +I AY + G V  A     E+RQ    P+ +   T I
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            IL + GR+E+A + F Q    G   +I  F  +I       ++  V E+  +M + G  
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 477

Query: 433 PDSHIIALVLNSYGKLREFETADDLY 458
           PD+  +  ++++  K      A D +
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFF 503



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 133/292 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P     N ++ N+ +  +   A   FD +   G+ PD  +Y+TLI  +   G  D +I  
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M    +  D   Y++L+    K      A++++  +    +    +  N M++   +
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQ 597

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     AR L  +M ++G +    +Y+T+L    EN    EAL +F ++      LD+ T
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I+   ++    +A  LF +M   G  P V++Y+ +++ + E  L  E+ +LF  M+
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +     +    N +++   +  +  +A   + ++  +     A T + +I I
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPI 769



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 35/258 (13%)

Query: 230 VSYNTLLRVYGEAELFGEAIHL-FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V+ N L++   +     +A+ + FR M       +V +YN +IK      + ++A  L+ 
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186

Query: 289 EMQNRG---IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
            M   G     PN ++Y+T+I  + K G++D+A  LF ++   G+  D V Y ++I    
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG-- 244

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
                                        L +A  +++A  + +  FD G + D   +  
Sbjct: 245 -----------------------------LCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI  +    +    + + +KM  +G  PD    +L++  Y K+     A  ++  M  +G
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 466 CVFSDQVHFQMLSLYGAR 483
              +  ++  +L  Y  +
Sbjct: 336 QKPNSTIYHILLHGYATK 353



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 84/184 (45%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N++L  + +A +   A  L+ +M  RG      TY+T++    +    D A+   + +  
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D+  +S +I    K+    +A S+FS +   G VPD++ Y+ MI    +  L +E
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           +  L   M + G   D+   + ++   +E      A +   +++E N  L+ +T  ++I 
Sbjct: 709 SDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIP 768

Query: 203 VYGQ 206
           +  +
Sbjct: 769 IVSE 772



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 61/131 (46%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  +++V+  +L+  + + A  LF  M  RG  PD  TYS +I    +EG+ + + +   
Sbjct: 655 VRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFL 714

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            ME++  + D  + + ++    +  D  +A +  +++       +      +I +  + K
Sbjct: 715 SMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKK 774

Query: 139 LFKEARLLIEE 149
             KE + L E+
Sbjct: 775 YQKEVKFLPEK 785


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 209/471 (44%), Gaps = 42/471 (8%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYST 59
           +++AI   I    +  P+  AYN ++  ++   Q+   H L++EM   G   PD  TYS 
Sbjct: 177 KAIAIFYQIKTR-KCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSA 235

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI+ F K G  DSA   L +M+++ +     +Y+ LI L  KL D   A+S+F  ++   
Sbjct: 236 LISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY 295

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD+  Y  +I   GKA    EA     EM+ +G +PDTV  + ++N   +  +  +A+
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAM 355

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F EM  + C                                    PSVV+YNT+++  
Sbjct: 356 KLFQEMGTLRC-----------------------------------IPSVVTYNTIIKAL 380

Query: 240 GEAE-LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            E++    E    F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P 
Sbjct: 381 FESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPC 440

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
              Y ++I   GKA + D A  LFQ+L+ +       +Y  MI    + G +  A  +  
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFD 500

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+ +    P+       ++ LAR G ++EA    R+  + G + DI+ +  ++   ++  
Sbjct: 501 EMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTG 560

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                +E+   M+ +   PD      VL +      FE A  L  EM   G
Sbjct: 561 GPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLG 611



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 219/490 (44%), Gaps = 10/490 (2%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT-YSTLITCFGK 66
           W  +   Y      Y  ++R +   +Q+     +  EM +  I     T  S ++   G 
Sbjct: 112 WAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGN 171

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLV 125
             M   AI+   Q++  +       Y+++I +      Y K   +++ + + G   PD +
Sbjct: 172 AKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTM 231

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y+ +I+ F K      A  L+ EM+E G++P T  Y+ L+ L+ +      ALS+F EM
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
               C  D+ T   +I   G+     +A   F+ M++ G  P  V  N ++   G+A   
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRL 351

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            +A+ LF+ M       +VVTYNT+IK ++       +  +  + M+  GI P++ TYS 
Sbjct: 352 DDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 411

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I  + K  ++++A ML +++   G    P  Y ++I A  +      A  L  EL++  
Sbjct: 412 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 363 PNTIPRETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            ++  R  A+ I  L +AGR+++A  +F +    G   D+  +  ++   +R       +
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
               +M+  G  PD +   ++LN   K      A ++ S M+ +  V  D V +   ++ 
Sbjct: 532 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK-QSTVRPDVVSYN--TVL 588

Query: 481 GARKDFNMLE 490
           GA     M E
Sbjct: 589 GALSHAGMFE 598



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 218/500 (43%), Gaps = 19/500 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           ++R    D  TY  LI C      +      +Q+M ++ +   +V  + L E+ R L + 
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSEVVRMLGNA 172

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
              SKAI+IF ++K+    P   AYN+MI +      + +   L  EM  +G   PDT++
Sbjct: 173 KMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMT 232

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A  +  EM E           ++I ++ +LD    A  LF  MR
Sbjct: 233 YSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMR 292

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                P V +Y  L+R  G+A    EA H F  MQR+    + V  N MI   GK+   +
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            A  L QEM      P+ +TY+TII A++    +       F++++ SG+      Y  +
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  + +   +  A  LL E+ +    P   A    I  L +A R + A  +F++  +   
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+   +  +  + I +F++M   G  PD +    +++   +    + A  
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 532

Query: 457 LYSEMQEEGCVFSDQVHFQMLS----LYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
               MQE GC+     +  +L+      G  +   ML ++ +       ++    ++ V 
Sbjct: 533 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS----YNTVL 588

Query: 513 GIYERANRLNDASRIMNRMN 532
           G    A    +A+++M  MN
Sbjct: 589 GALSHAGMFEEAAKLMEEMN 608



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 39/340 (11%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R+    P VF Y  ++R + +A + + A+  F EM++ G  PD    + +I   GK 
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D A+   Q+M   R    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LYVE-- 171
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++             L+ E  
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 172 ---------------NH-----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
                           H     +  +A+++F EMN++ C  D+   N ++    +  M  
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A      M++ G  P + SYN +L    +      A+ +   M++  +  +VV+YNT++
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 588

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                +   E+A  LM+EM   G E + ITYS+I+   GK
Sbjct: 589 GALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 2/269 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R  PSV  YN +++ +  +K +       F+ M++ GI+P  +TYS LI  F K    + 
Sbjct: 365 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 424

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L++M++         Y +LI+   K   Y  A  +F  LK +        Y  MI 
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    +A  + +EM + G  PD  +Y+ L++         EALS    M E  C  
Sbjct: 485 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ + NI+++   +      A  +  +M++  + P VVSYNT+L     A +F EA  L 
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLM 604

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             M     E +++TY+++++  GK ++HE
Sbjct: 605 EEMNTLGFEYDLITYSSILEAIGK-VDHE 632



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 177/384 (46%), Gaps = 9/384 (2%)

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           DT +Y  L+       ++ E   +  EM  N + C +  T  + ++ + G   M   A  
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPI-CVVTPTELSEVVRMLGNAKMVSKAIA 180

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIY 274
           +F+ ++     P+  +YN+++ +      +G+   L+  M  +     + +TY+ +I  +
Sbjct: 181 IFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAF 240

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K    + AT L+ EM+  G++P    Y+ +I ++ K   +  A  LF+++R      D 
Sbjct: 241 CKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDV 300

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
             Y  +I    + G +  A    +E+++    P+T+     I  L +AGR+++A  +F++
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQE 360

Query: 391 AFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                 +  +  +  +I+ LF    + + V   FE+M+ +G  P S   +++++ + K  
Sbjct: 361 MGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 420

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             E A  L  EM E+G       +  ++   G  K +++   LF+ L  +   +   ++ 
Sbjct: 421 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480

Query: 510 VVAGIYERANRLNDASRIMNRMNK 533
           V+     +A RL+DA  + + MNK
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNK 504


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 232/498 (46%), Gaps = 39/498 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P  F+YNVV+  + R+ +   A  +FDEM   G+ P+  TY+T+I    K G  +
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN--- 128
           +      QM  D    ++V Y+ L+    +     +   +   + S  + PD   Y+   
Sbjct: 69  AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128

Query: 129 ----------TMINVFGKA-----------------KLFKEARL-----LIEEMREQGVK 156
                     TM+++F ++                  L K+ ++     ++E +   G+ 
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P TV Y+TL+N Y +      A  +F +M   +   D  T N +I+   +L+M   A+ L
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 248

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M K G+DPSV ++NTL+  YG A    +   +   MQ+K I+ +V+++ +++K + K
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 308

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           + +  +A  ++ +M  + + PNA  Y++II  + ++G  ++A +L +K+++SGV    V 
Sbjct: 309 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVT 368

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    R   +  A+ L++ LR    +P+ +   T I+     G  ++A  + ++  
Sbjct: 369 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G    +  +  ++   +   +  ++  ++++M      P S I  +++++Y +     
Sbjct: 429 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 488

Query: 453 TADDLYSEMQEEGCVFSD 470
               L  EM E+G  F D
Sbjct: 489 KVASLKKEMSEKGIAFDD 506



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 35/285 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E++   PSV  +N ++     A Q E    +  +M+Q+GI  D  ++ +++  F K G  
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++ L  M    V+ +  +Y+++I+   +  D  +A  +  ++K+SG+   +V YN +
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    ++    EA  LI  +R QG++PD VSY+T+++         +AL +  EMN    
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN---- 428

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                          K GI P++ +Y+TL+     A    +   
Sbjct: 429 -------------------------------KYGIRPTLRTYHTLVSALASAGRVHDMEC 457

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           L++ M  K +E +   Y  M+  Y +     K  +L +EM  +GI
Sbjct: 458 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 5/288 (1%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P D  + N++I    +     DA ++F  M  MG+ P+ ++YNT++  + +         
Sbjct: 13  PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M     + N+VTYN ++    ++   ++   LM EM +  + P+  TYS +     
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTI 366
           + G+      LF +    GV +       ++    + G VA A++    L+H    P T+
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I    +   +  A  +F Q        D   +  +I    + +      ++  +M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
             +G  P       ++++YG   + E    + S+MQ++G + SD + F
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG-IKSDVISF 299



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 2   SVAILD-WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +VAILD  I ++   +P+   YN ++   + +   E A  L ++M+  G++    TY+ L
Sbjct: 315 AVAILDDMIYKDV--APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    +    D A   +  +    +  D+V Y+ +I       D  KA+ +   +   GI
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P L  Y+T+++    A    +   L ++M  + V+P +  Y  +++ YV      +  S
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492

Query: 181 VFAEMNEVNCPLDLT 195
           +  EM+E     D T
Sbjct: 493 LKKEMSEKGIAFDDT 507


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 222/471 (47%), Gaps = 22/471 (4%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM++ GI PD YTY+TL+  F K G+ + A 
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +W  +M+QD  + ++V Y+ LI    K    S+A  IF  + S+G VP++V Y  +I+  
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 135 GKAKLFKEARLLIEEMREQGV-----------------KPDTVSYSTLLNLYVENHKFVE 177
            KA   ++A  +   M+   V                 +P+ V+Y  L++   + HK  E
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A  +   M+   C  +    + +ID + ++    +A  +F  M   G  P+V +Y++L+ 
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              + +    A+ +   M       NVV Y  M+    K  + ++A  LM  M+ +G  P
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I  +GKAG++DR   L Q + S G   + + Y+ +I      GL+  A +LL
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 358 HELRQPNTIPRETAI---TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            E++Q    P+   +    I   +     +  +  +  + G V  + V+  +I+ F +  
Sbjct: 478 EEMKQ-TYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG 536

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    +E+ E++ S      +  ++L+  S     + + A  LYS+M   G
Sbjct: 537 RLEMALELHEELSSFSAAYQNTYVSLI-ESLTLACKVDKAFKLYSDMTRRG 586



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 203/460 (44%), Gaps = 30/460 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWE------LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           Y P    YN+++  +   +         LA   ++EM + G+  ++        C    G
Sbjct: 42  YQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIG 101

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            F+ A + +++M       D   YS +I      S   KA  +F  +K +GI PD+  Y 
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYT 161

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+++ F K  L ++AR   +EM++ G  P+ V+Y+ L++ Y++  K   A  +F  M   
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID-PSVVSYNTLLRVYGEAELFGE 247
            C  ++ T   +ID + +    + A +++  M+   +D P V  Y               
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIY--------------- 266

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
               FR++  +  E NVVTY  ++    K+ + ++A +L++ M   G EPN I Y  +I 
Sbjct: 267 ----FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALID 322

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA-KRLLHELRQP 363
            + K GKLD A  +F K+   G   +   Y ++I      +R+ L      ++L     P
Sbjct: 323 GFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAP 382

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +     +  L + G+ +EA  +     + G   ++  +  MI+ F +  +    +E+ 
Sbjct: 383 NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELL 442

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           + M S G  P+     +++N        + A  L  EM++
Sbjct: 443 QLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 204/471 (43%), Gaps = 27/471 (5%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL--- 146
           +++++L+    +  DY  A  +  ++   G  P  V YN +I      +      ++   
Sbjct: 12  MIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLA 71

Query: 147 ---IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
                EM E GV  + V+            KF +A +V  EM       D +T + +I  
Sbjct: 72  ERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGY 131

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
                  + A +LF  M++ GI P V +Y TLL  + +  L  +A + F  MQ+     N
Sbjct: 132 LCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPN 191

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY  +I  Y K+ +  +A  + + M + G  PN +TY+ +I    KAG+ ++A  ++ 
Sbjct: 192 VVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYA 251

Query: 324 KLRSSGVEI----------DPVLYQTMIVAYERV--GL-----VAHAKRLLHELR----Q 362
           ++++  V+I          D  L +  +V Y  +  GL     V  A+ LL  +     +
Sbjct: 252 RMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCE 311

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN I  +  I    + G+++EA  VF +    G   ++  +  +I+   ++K+    ++V
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             KM      P+  I   +++   K+ + + A  L   M+E+GC  +   +  M+  +G 
Sbjct: 372 LTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               +    L + + S         + V+      A  L+DA +++  M +
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 5/306 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++    +  + + A  +F +M   G +P+ YTYS+LI    K+   D A+  
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M ++  + ++V+Y+ +++   K+    +A  +   ++  G  P++V Y  MI+ FGK
Sbjct: 372 LTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A        L++ M  +G  P+ ++Y  L+N         +A  +  EM +   P  +  
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-LM 255
              +I+ +    +A     L   + + G  P +  Y  L+  + +A     A+ L   L 
Sbjct: 492 YRKVIEGFSHEFVASLG--LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELS 549

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                 QN  TY ++I+    + + +KA  L  +M  RG  P       +I    + GK 
Sbjct: 550 SFSAAYQN--TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKW 607

Query: 316 DRAAML 321
           + A  L
Sbjct: 608 EEALQL 613



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 68/308 (22%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI---EQNVVTYNTMI--------- 271
           G  PS + +N+L+  Y  +   G+  + ++L+++  I   +   V YN +I         
Sbjct: 6   GCYPSPMIFNSLVHAYCRS---GDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDL 62

Query: 272 ----------KIYGKSLE----------------------HEKATNLMQEMQNRGIEPNA 299
                     + Y + LE                       EKA N+++EM ++G  P++
Sbjct: 63  PSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS 122

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TYS +I     A K+++A  LFQ+++ +G+  D   Y T++  + +VGL+  A+    E
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++Q    PN +     I    +  ++  A  +F      G V +I  +  +I+   +  +
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 416 YANVIEVFEKMRSAGY-FPDSHIIALVLNS---------YGKL-------REFETADDLY 458
                +++ +M++     PD  I   +++S         YG L        + + A DL 
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 459 SEMQEEGC 466
             M  EGC
Sbjct: 303 ETMSLEGC 310



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 2/140 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y  ++    +A + +    L   M  +G AP+  TY  LI      G+ 
Sbjct: 411 EEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLL 470

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L++M+Q      + +Y  +IE      ++  ++ + + L   G VP L  Y  +
Sbjct: 471 DDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLL 528

Query: 131 INVFGKAKLFKEARLLIEEM 150
           I+ F KA   + A  L EE+
Sbjct: 529 IDNFIKAGRLEMALELHEEL 548


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P+VF+YN++L+ +    + + A  L   M   G    PD  +Y+T+I  F KEG  D A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    +  ++V YS++I    K     KA+ + + +  +G++P+   YN++++ +
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +   KEA   +++M   GV+PD V+Y++L++   +N +  EA  +F  M +     ++
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   ++  Y       +   L   M + GI P+   ++ L+  Y +     +A+ +F  
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  + VTY T+I I  KS   E A    ++M +  + P  I Y+++I       K
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            D+A  L  ++   G+ +D + + ++I ++ + G V  +++L   +     +P+ I   T
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M S+G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD     ++L    + R    A +LY  + E G
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 213/490 (43%), Gaps = 39/490 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  V+    +    + A+G + EM  RGI P+  TYS++I    K    D A+  
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  +   Y++++          +AI    ++ S G+ PD+V YN++++   K
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G+KP+  +Y TLL  Y      VE   +   M       +   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I  Y +      A  +F  MR+ G++P  V+Y T++ +  ++    +A+  F  M 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +    + YN++I       + +KA  L+ EM +RGI                     
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +P+ ITYST+I  +  AGK+D A  L   + S G++ D V Y T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+      P+ I     +  L +  R   A  ++    ++G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++S +  ++    +N      + +F+ +       ++    +++ +  K+   + A DL
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 458 YSEMQEEGCV 467
           ++ +   G V
Sbjct: 677 FAALSANGLV 686



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 4/396 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S LI    K     +A+ +FS+++  G+ PD V Y T+I +  K
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A    E+M ++ + P  + Y++L++      K+ +A  +  EM +    LD   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++Y+TL+  Y  A    EA  L   M 
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             L + GR +EA  +F      G V D+  +  M E
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 195/440 (44%), Gaps = 11/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P+  TY  LI      G  D   
Sbjct: 53  SIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGF 111

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                  +EA  L++ M + G    PD VSY+T++N + +     +A   + EM +    
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGIL 231

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T + +I    +      A  +  SM K G+ P+  +YN+++  Y  +    EAI  
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M    +E +VVTYN+++    K+    +A  +   M  RG++P   TY T++  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G L     L   +  +G+  +  ++  +I AY + G V  A  +  ++RQ    P+T+ 
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL ++GR+E+A   F Q  D        V+  +I       K+    E+  +M 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 428 SAGYFPDSHIIALVLNSYGK 447
             G   D+     +++S+ K
Sbjct: 472 DRGICLDTIFFNSIIDSHCK 491



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 165/369 (44%), Gaps = 43/369 (11%)

Query: 106 SKAISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           + A+S ++R+  +G   + P+L  Y  +I     A         +  + ++G + D +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + LL     + +  +A+                                  D +   M +
Sbjct: 130 TPLLKGLCADKRTSDAM----------------------------------DIVLRRMTQ 155

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEH 280
           +G  P+V SYN LL+   +     EA+ L ++M     +   +VV+Y T+I  + K  + 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +KA     EM +RGI PN +TYS+IIA   KA  +D+A  +   +  +GV  +   Y ++
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y   G    A   L ++     +P+ +   + +  L + GR  EA  +F      G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +I+ +G +++ ++       +  + + M   G  P+ ++ ++++ +Y K  + + A  
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 457 LYSEMQEEG 465
           ++S+M+++G
Sbjct: 396 VFSKMRQQG 404



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP    YN ++ ++    +W+ A  L  EM  RGI  D   ++++I    KEG   
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +      M +  V  D++ YS LI+   LA K+ + +K   + + + S G+ PD V YN
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK---LLASMVSVGMKPDCVTYN 553

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+IN + K    ++A +L  EM   GV PD ++Y+ +L    +  +   A  ++  + E 
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L+L+T NI++    + ++  +A R+F ++    +     ++N ++    +     EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             LF  +    +  +V TY+ M +   +    E+  +L   M+  G   N+   ++I+  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 309 WGKAGKLDRAA 319
             + G + RA 
Sbjct: 734 LLQRGDITRAG 744



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/193 (19%), Positives = 90/193 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +  L +E   L   M E G   ++   ++++   ++      A +    ++E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 191 PLDLTTCNIMIDV 203
            L+ +T ++ +D+
Sbjct: 756 SLEASTASLFLDL 768


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 210/434 (48%), Gaps = 8/434 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  +N ++  +    +   A  L ++M  +G+  D  TY T++    K G   
Sbjct: 214 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 273

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA++ L +ME+  +  D+V+YS +I+   K   +S A  +FS +   GI P++  YN MI
Sbjct: 274 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 333

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F     + +A+ L+ +M E+ + PD ++++ L++  V+  K  EA  +  EM      
Sbjct: 334 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 393

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T N MI  + + +   DA  +F  M      P VV++NT++ VY  A+   E + L
Sbjct: 394 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 449

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R + R+ +  N  TYNT+I  + +      A +L QEM + G+ P+ IT + ++  + +
Sbjct: 450 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 509

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             KL+ A  LF+ ++ S +++D V Y  +I    +   V  A  L   L     +P+   
Sbjct: 510 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 569

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I+       I +A  +F +  D G   D S +  +I    +  +    IE+  +MR
Sbjct: 570 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 629

Query: 428 SAGYFPDSHIIALV 441
           S G+  D+  I +V
Sbjct: 630 SNGFSGDAFTIKMV 643



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 219/465 (47%), Gaps = 18/465 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELA----------HGLFDEMRQRGIAPDRYTYSTLITCF 64
           + P V  +N +L  +    +   A            LFD+M + G+ P   T++TLI   
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
             EG    A + + +M    +  D+V Y  ++    K+ D   A+++ S+++ + I PD+
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V Y+ +I+   K     +A+ L  EM E+G+ P+  +Y+ +++ +    ++ +A  +  +
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M E     D+ T N +I    +     +A++L   M    I P  V+YN+++  + +   
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           F +A H+F LM   +    VVT+NT+I +Y ++   ++   L++E+  RG+  N  TY+T
Sbjct: 412 FDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP- 363
           +I  + +   L+ A  LFQ++ S GV  D +    ++  +     +  A  L   ++   
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 364 ---NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
              +T+     I  + +  +++EA  +F      G   D+  +  MI  F      ++  
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +F KM+  G+ PD+     ++    K  E + + +L SEM+  G
Sbjct: 588 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 175/352 (49%), Gaps = 4/352 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  Y+ ++  + +      A  LF EM ++GIAP+ +TY+ +I  F   G +
Sbjct: 283 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 342

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L+ M +  ++ D++ ++ LI  + K     +A  +   +    I PD V YN+M
Sbjct: 343 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 402

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F K   F +A+ + + M      PD V+++T++++Y    +  E + +  E++    
Sbjct: 403 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 458

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             + TT N +I  + ++D    A  LF  M   G+ P  ++ N LL  + E E   EA+ 
Sbjct: 459 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 518

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF ++Q  +I+ + V YN +I    K  + ++A +L   +   G+EP+  TY+ +I+ + 
Sbjct: 519 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 578

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
               +  A +LF K++ +G E D   Y T+I    + G +  +  L+ E+R 
Sbjct: 579 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 630



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 225/499 (45%), Gaps = 34/499 (6%)

Query: 3   VAILDWINEEARYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           VAI  +   E R  P +++++N++++      +   +   F ++ + G  PD  T++TL+
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G+            +DR+S  L L+  ++E            S+F ++   G+ 
Sbjct: 184 -----HGL----------CLEDRISEALALFGYMVETG----------SLFDQMVEIGLT 218

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P ++ +NT+IN         EA  L+ +M  +G+  D V+Y T++N   +      AL++
Sbjct: 219 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 278

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            ++M E +   D+   + +ID   +     DA  LF  M + GI P+V +YN ++  +  
Sbjct: 279 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 338

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              + +A  L R M  +EI  +V+T+N +I    K  +  +A  L  EM +R I P+ +T
Sbjct: 339 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 398

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+++I  + K  + D A  +F  + S     D V + T+I  Y R   V    +LL E+ 
Sbjct: 399 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 454

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +     NT    T I        +  A  +F++    G   D      ++  F  N+K  
Sbjct: 455 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 514

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E+FE ++ +    D+    ++++   K  + + A DL+  +   G     Q +  M+
Sbjct: 515 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 574

Query: 478 SLYGARKDFNMLESLFERL 496
           S +  +   +    LF ++
Sbjct: 575 SGFCGKSAISDANVLFHKM 593



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 57  YSTLITCFGKEGMF------DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
           + T + C    G+F      D AIS  ++ME  R+  ++  ++ LI+        S ++S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL----------LIEEMREQGVKPDTV 160
            F +L   G  PD+V +NT+++         EA            L ++M E G+ P  +
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVI 222

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++TL+N      + +EA ++  +M      +D+ T   +++   ++   K A  L   M
Sbjct: 223 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 282

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +  I P VV Y+ ++    +     +A +LF  M  K I  NV TYN MI  +      
Sbjct: 283 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 342

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A  L+++M  R I P+ +T++ +I+   K GKL  A  L  ++    +  D V Y +M
Sbjct: 343 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 402

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I  + +      AK +   +  P+ +   T I +  RA R++E   + R+    G V + 
Sbjct: 403 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  +I  F          ++F++M S G  PD+    ++L  + +  + E A +L+  
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522

Query: 461 MQ 462
           +Q
Sbjct: 523 IQ 524



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 5/307 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  +N ++   ++  +   A  L DEM  R I PD  TY+++I  F K   FD
Sbjct: 354 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 413

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M     S D+V ++ +I++  +     + + +   +   G+V +   YNT+I
Sbjct: 414 DAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 469

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F +      A+ L +EM   GV PDT++ + LL  + EN K  EAL +F  +      
Sbjct: 470 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 529

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           LD    NI+I    +     +A  LF S+   G++P V +YN ++  +       +A  L
Sbjct: 530 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 589

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+    E +  TYNT+I+   K+ E +K+  L+ EM++ G   +A T   ++A    
Sbjct: 590 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLIT 648

Query: 312 AGKLDRA 318
            G+LD++
Sbjct: 649 DGRLDKS 655



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 170/382 (44%), Gaps = 39/382 (10%)

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V  + ++ ++V  ++   A+S++ +M     PL++ + NI+I  +        +   F  
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           + K+G  P VV++NTLL      +   EA+ LF  M                        
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV----------------------- 203

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +  +L  +M   G+ P  IT++T+I      G++  AA L  K+   G+ ID V Y T
Sbjct: 204 --ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++    ++G    A  LL ++ +    P+ +     I  L + G   +A ++F +  + G
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
              ++  + CMI+ F    ++++   +   M      PD     AL+  S  + + FE A
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-A 380

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHHVVA 512
           + L  EM    C+F D V +  + +YG  K   F+  + +F+ + S   +      + + 
Sbjct: 381 EKLCDEMLHR-CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFDLMASPDVVT----FNTII 434

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            +Y RA R+++  +++  +++R
Sbjct: 435 DVYCRAKRVDEGMQLLREISRR 456


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P+VF+YN++L+ +    + + A  L   M   G    PD  +Y+T+I  F KEG  D A 
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    +  ++V YS++I    K     KA+ + + +  +G++P+   YN++++ +
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +   KEA   +++M   GV+PD V+Y++L++   +N +  EA  +F  M +     ++
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   ++  Y       +   L   M + GI P+   ++ L+  Y +     +A+ +F  
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  + VTY T+I I  KS   E A    ++M +  + P  I Y+++I       K
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            D+A  L  ++   G+ +D + + ++I ++ + G V  +++L   +     +P+ I   T
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M S+G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD     ++L    + R    A +LY  + E G
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 213/490 (43%), Gaps = 39/490 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  V+    +    + A+G + EM  RGI P+  TYS++I    K    D A+  
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  +   Y++++          +AI    ++ S G+ PD+V YN++++   K
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G+KP+  +Y TLL  Y      VE   +   M       +   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I  Y +      A  +F  MR+ G++P  V+Y T++ +  ++    +A+  F  M 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +    + YN++I       + +KA  L+ EM +RGI                     
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +P+ ITYST+I  +  AGK+D A  L   + S G++ D V Y T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+      P+ I     +  L +  R   A  ++    ++G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++S +  ++    +N      + +F+ +       ++    +++ +  K+   + A DL
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 458 YSEMQEEGCV 467
           ++ +   G V
Sbjct: 677 FAALSANGLV 686



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 4/396 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S LI    K     +A+ +FS+++  G+ PD V Y T+I +  K
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A    E+M ++ + P  + Y++L++      K+ +A  +  EM +    LD   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++Y+TL+  Y  A    EA  L   M 
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             L + GR +EA  +F      G V D+  +  M E
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/453 (21%), Positives = 207/453 (45%), Gaps = 18/453 (3%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ---DRVSGDLVLY 92
           E A  +FDE+ +RG     Y  +  +    +     +A+S   +M +   D V+ +L  Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR-LLIEEMR 151
             L+             +    +   G + D +A+  M+      K   +A  +++  M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCNIMIDVY---GQ 206
           + G  P+  SY+ LL    ++++  EAL +   M +   +CP D+ +   +I+ +   G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           LD A      +  M   GI P+VV+Y++++    +A+   +A+ +   M +  +  N  T
Sbjct: 215 LDKAYGT---YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN+++  Y  S + ++A   +++M + G+EP+ +TY++++    K G+   A  +F  + 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIE 382
             G++ +   Y T++  Y   G +     LL  + +    P     +IL    A+ G+++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  VF +    G   D   +G +I +  ++ +  + +  FE+M      P + +   ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           +S     +++ A +L  EM + G +  D + F 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRG-ICLDTIFFN 483



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP    YN ++ ++    +W+ A  L  EM  RGI  D   ++++I    KEG   
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +      M +  V  D++ YS LI+   LA K+ + +K   + + + S G+ PD V YN
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK---LLASMVSVGMKPDCVTYN 553

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+IN + K    ++A +L  EM   GV PD ++Y+ +L    +  +   A  ++  + E 
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L+L+T NI++    + ++  +A R+F ++    +     ++N ++    +     EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             LF  +    +  +V TY+ M +   +    E+  +L   M+  G   N+   ++I+  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 309 WGKAGKLDRAA 319
             + G + RA 
Sbjct: 734 LLQRGDITRAG 744



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/193 (19%), Positives = 90/193 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +  L +E   L   M E G   ++   ++++   ++      A +    ++E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 191 PLDLTTCNIMIDV 203
            L+ +T ++ +D+
Sbjct: 756 SLEASTASLFLDL 768


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 231/495 (46%), Gaps = 9/495 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            I D +       PS  +   +++ + R K    A  +F +++ R   P   TY+++I  
Sbjct: 147 TIQDMVKSPCAIGPSELSE--IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILM 204

Query: 64  FGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             +EG  +       +M  +     D V YS LI    KL+    A+ +F  +K +G+ P
Sbjct: 205 LMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQP 264

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
               Y T++ ++ K    +EA  L+ EMR +   P   +Y+ L+    ++ +  +A  V+
Sbjct: 265 TAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVY 324

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-VYGE 241
             M +  C  D+   N +I++ G+ D  K+A  LF  MR +   P+VV+YNT+++ ++ +
Sbjct: 325 KNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFED 384

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA      M++  +  +  TY+ +I  + K+   EKA  L++EM  +G  P    
Sbjct: 385 KAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 444

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y ++I   GKA + + A  LFQ+L+ +       +Y  MI  + + G    A  L +E++
Sbjct: 445 YCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMK 504

Query: 362 QPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +   IP   A    IT + RA  ++EA  +FR   + G   DI+    ++   +R     
Sbjct: 505 KLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPK 564

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E+F KM+S+   PD+     VL    +   FE A  L  EM  +G  +    +  +L
Sbjct: 565 RAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSIL 624

Query: 478 SLYG-ARKDFNMLES 491
              G   +D NM ES
Sbjct: 625 EAVGKVDEDRNMAES 639



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 178/360 (49%), Gaps = 2/360 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V + D + E     P+   Y  ++    +  + E A  L  EMR R   P  YTY+ LI
Sbjct: 250 AVRLFDEMKENG-LQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELI 308

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GK G  + A    + M +D    D+VL +NLI +  +     +A+ +F  ++     
Sbjct: 309 RGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCT 368

Query: 122 PDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           P++V YNT+I ++F       EA   +E M++ GV P + +YS L++ + + ++  +AL 
Sbjct: 369 PNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALL 428

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM+E   P        +I+  G+    + A+ LF  +++     SV  Y  +++ +G
Sbjct: 429 LLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFG 488

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +   F EA+ LF  M++     +V  YN +I    ++   ++A +L + M+  G  P+  
Sbjct: 489 KCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDIN 548

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +++ I+    + G   RA  +F K++SS ++ D V Y T++    R GL   A +L+ E+
Sbjct: 549 SHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEM 608



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 156/351 (44%), Gaps = 43/351 (12%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
            I PS +S   ++++ G  ++  +A+ +F  ++ ++      TYN++I +  +   HEK 
Sbjct: 157 AIGPSELS--EIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKV 214

Query: 284 TNLMQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
             L  EM + G   P+ +TYS +I+ +GK  + D A  LF +++ +G++    +Y T++ 
Sbjct: 215 HELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMG 274

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAGEVK 398
            Y ++G V  A  L+HE+R    +P     T L R    +GR+E+A  V++     G   
Sbjct: 275 IYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKP 334

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMR------------------------------- 427
           D+ +   +I +  R+ +    +E+FE+MR                               
Sbjct: 335 DVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSW 394

Query: 428 -----SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
                  G  P S   +++++ + K    E A  L  EM E+G       +  +++  G 
Sbjct: 395 LERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 454

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            K +     LF+ L  +   +   ++ V+   + +  R N+A  + N M K
Sbjct: 455 AKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKK 505



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 40/211 (18%)

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTI-PRETA--ITILARAGRIEEATW 386
           E D   Y  +I   +   LV    R + ++ + P  I P E +  + IL R   + +A  
Sbjct: 122 EHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALS 181

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY-FPDSHIIALVLNSY 445
           +F Q            +  +I +  +   +  V E++ +M S G+ FPD+   + +++++
Sbjct: 182 IFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAF 241

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
           GKL   ++A  L+ EM+E G   + +++  ++                            
Sbjct: 242 GKLNRDDSAVRLFDEMKENGLQPTAKIYTTLM---------------------------- 273

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
                  GIY +  ++ +A  +++ M  RR 
Sbjct: 274 -------GIYFKLGKVEEALNLVHEMRMRRC 297


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 207/442 (46%), Gaps = 9/442 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  YN+VL  +L    +++ + L++ M+  G+ P+ +TY+ L+    + G  D A   
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL 201

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M       D V Y+ +I    KL D  KA  +   +K   +VP    YN +I+   K
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--AMKFEPVVP---VYNALIHGVCK 256

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              FKEA  L+ EM ++GV P+ +SYST+++   +      +L+VF  M    C  ++ T
Sbjct: 257 ECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQT 316

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  +       DA  L+  M + G+ P+VV+YNTL+          EAI ++  M+
Sbjct: 317 FTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQME 376

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  I  NV TY+T+I  + KS +   A     +M N G  PN + Y+ ++ +  +    D
Sbjct: 377 KDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFD 436

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  L   + S G     + +   I    R G V  A  +L ++ +    PN       +
Sbjct: 437 QAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELL 496

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L RA    EA  + R+  +     D   +  ++  FS N  +  V+++  KM   G  
Sbjct: 497 DGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIK 556

Query: 433 PDSHIIALVLNSYGKLREFETA 454
            D+  +   +N+Y KL + +TA
Sbjct: 557 LDTITVNTTVNAYCKLGKVKTA 578



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 181/404 (44%), Gaps = 42/404 (10%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++ P V  YN ++  V +  +++ A  L +EM  RG+ P+  +YST+I+C    G  + +
Sbjct: 239 KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELS 298

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++   +M       ++  +++LI+          A+ +++ +   G+ P++VAYNT+I+ 
Sbjct: 299 LAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHG 358

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                   EA  +  +M +  ++P+  +YST++  + ++   V A   + +M    C  +
Sbjct: 359 LCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPN 418

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL----------------- 236
           +     M+DV  Q+ M   A  L  +M   G  P+V+++N  +                 
Sbjct: 419 VVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478

Query: 237 -----------RVYGE-------AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                      R Y E       A  F EA  L R ++ +++E + VTYNT+  +YG S 
Sbjct: 479 QMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI--MYGFSF 536

Query: 279 E--HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
              H++   L+ +M   GI+ + IT +T +  + K GK+  A  +   + +       ++
Sbjct: 537 NGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADII 596

Query: 337 YQTMIV--AYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             T+I+      +G    A   LHE+ +    P      +L R 
Sbjct: 597 THTIILWGICNWLG-TEEAVVYLHEMLKRGIFPNIATWNVLVRG 639



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 181/409 (44%), Gaps = 35/409 (8%)

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDL-VAYNTMINVFGKAKLFKEARLLIEEMR 151
           S+++++ R+  D   ++  F  L +SG      + Y TMI+  G+         L+++M+
Sbjct: 42  SHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMK 101

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            + V      +  ++  Y  ++   + L +F  + E  C   +   N+++D     ++ K
Sbjct: 102 LENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFK 161

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             + L+ +M+  G++P+V +YN LL+   +      A  L   M  K  + + V+Y T+I
Sbjct: 162 MINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVI 221

Query: 272 K----------------------------IYG--KSLEHEKATNLMQEMQNRGIEPNAIT 301
                                        I+G  K    ++A +LM EM +RG++PN I+
Sbjct: 222 SSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVIS 281

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----L 357
           YST+I+     G ++ +  +F ++   G   +   + ++I  +   G V  A  L    +
Sbjct: 282 YSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMI 341

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E   PN +   T I  L   G ++EA  V+ Q        +++ +  +I  F+++    
Sbjct: 342 REGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLV 401

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +  E + KM + G  P+  +   +++   ++  F+ A DL   M  +GC
Sbjct: 402 SACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGC 450



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 137/313 (43%), Gaps = 40/313 (12%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG------- 68
           SP+V AYN ++  +      + A  ++++M +  I P+  TYST+I  F K G       
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405

Query: 69  ----------------------------MFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
                                       MFD A   +  M  D     ++ ++N I+   
Sbjct: 406 TWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLC 465

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +      A+++  +++    +P++  YN +++   +A  F+EA  LI E+ E+ V+ D V
Sbjct: 466 RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCV 525

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T++  +  N    + L +  +M      LD  T N  ++ Y +L   K A ++  ++
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI 585

Query: 221 R-KMGIDPSVVSYNTLLRVYGEAELFG--EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             +      ++++  +L  +G     G  EA+     M ++ I  N+ T+N +++ +   
Sbjct: 586 SAEKEFRADIITHTIIL--WGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSK 643

Query: 278 LEHEKATNLMQEM 290
           L H     ++ ++
Sbjct: 644 LGHMGPIRILDDI 656


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 223/492 (45%), Gaps = 41/492 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P    Y  ++R +      +L   L  EMR+ G         + +  +  + +FD A+
Sbjct: 70  FAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV 129

Query: 75  SWLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             +    Q    +  D V+Y++L+ +  + S      S++S + + GI PD+V +NT++ 
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMK 189

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A   + A L++EEM  +GV PD  +++TL+  +VE      AL V A M E+ C  
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N++I+ Y +L   +DA          G +P  ++YNT +    + +  G A+ + 
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M ++  + +V TYN ++    K+ + E+A  ++ +M +RG  P+  T++T+IA     
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369

Query: 313 GKLDR-----------------------------------AAMLFQKLRSSGVEIDPVLY 337
            +L+                                    A  LF+++++SG   D V Y
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I     +G +  A  LL ++       +TI   T I  L +  RIEEA  VF Q   
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G  ++   F  +I+   ++KK  +  E+  +M S G  P++     +L  Y K  + + 
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 454 ADDLYSEMQEEG 465
           A D+   M   G
Sbjct: 550 AADILETMTANG 561



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---- 72
           P V  +N +++ + RA Q   A  + +EM  RG+APD  T++TL+  F +EG  ++    
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 73  -------------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                          A+ ++QQ   D    D + Y+  +    +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A+ +   +   G  PD+  YN ++N   K    +EA+ ++ +M ++G  PD  +
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  ++       D+ T NI+I+   ++     A RLF  M+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YNTL+         G+A+ L + M+     ++ +TYNT+I    K +  E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  NAIT++T+I    K  K+D A  L  ++ S G++ + + Y +++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  V R     G  
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +++   R     + + +F +M   G  PD+    +V        G ++E   
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE--- 655

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM ++G +  FS    F+ML+
Sbjct: 656 AFDFMLEMVDKGFIPEFS---SFRMLA 679



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+ ++ C
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A   L QM       D+  ++ LI      +   +A+ +  ++   G+ PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K      A  L EEM+  G  PD V+Y+TL++      K  +AL +  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+    + +
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N +TYN+++  Y K  + +KA ++++ M   G E + +TY 
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  + + +R  G+   P  Y  ++ +  R   +  A  L  E+ + 
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVF 403
              P      I+ R      G I+EA     +  D G + + S F
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 69/245 (28%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +   +N ++  + + K+ + A  L ++M   G+ P+  TY++++T + K+G    A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI---- 131
            L+ M  +    D+V Y  LI    K      A+ +   ++  G+ P   AYN ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 132 ---NVFGKAKLF-----------------------------KEARLLIEEMREQGVKPDT 159
              N+     LF                             KEA   + EM ++G  P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 160 VSY----STLLNL-----------------------------YVENHKFVEALSVFAEMN 186
            S+      LLNL                             Y++  KF +AL+ F    
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732

Query: 187 EVNCP 191
           E+N P
Sbjct: 733 EINNP 737



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 6/176 (3%)

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P    Y  II   G  G LD   +L  ++R  G ++   +  + + +YE   L   A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 357 LHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           +    QP      +T+     + +L    +++    V+ +    G   D+  F  +++  
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            R  +    + + E+M S G  PD      ++  + +    E A  + + M E GC
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247


>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
          Length = 838

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 6/389 (1%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           PD   Y+ LI  +G++ ++  A S   ++ + R       Y+ L++         KA ++
Sbjct: 96  PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 155

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           F+ ++  G  P  V YN  I+   K    ++A  + E M+    +P T +Y+ L+NLY +
Sbjct: 156 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 215

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             K   AL VF EM    C  ++ T   +++ + +  + + A+ +F  +++ G++P V +
Sbjct: 216 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 275

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN L+  Y  A     A  +F LMQ    E +  +YN M+  YG++  HE A  + + M+
Sbjct: 276 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 335

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             GI P   ++  +++ + +AGK+ +   +  ++  SG++ D  +  +M+  Y R+G   
Sbjct: 336 RLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFE 395

Query: 352 HAKRLLHELRQPNTIPRETA-----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             + +L  + +    P + +     I I  RAG       +FR       + D+  +   
Sbjct: 396 KMEEVLTAMEK-GPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSR 454

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           I  +SR K+Y   +EVFE+M  AG +PD 
Sbjct: 455 IGAYSRRKQYNRCLEVFEEMIDAGCYPDG 483



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 182/383 (47%), Gaps = 4/383 (1%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D++ Y+ LI+   + S Y KA S +  L  +  VP    Y  ++  +  + L ++A  + 
Sbjct: 97  DVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF 156

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
            EMR+ G  P  V Y+  ++  ++     +A+ +F  M    C     T  ++I++YG+ 
Sbjct: 157 AEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKA 216

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
             +  A ++F  MR     P++ ++  L+  +    L  +A  +F  +Q   +E +V  Y
Sbjct: 217 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 276

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +++ Y ++     A  +   MQ+ G EP+  +Y+ ++  +G+AG  + A  +F+ ++ 
Sbjct: 277 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 336

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+      +  ++ AY R G VA  + +++++ +    P+T    + + +  R G+ E+
Sbjct: 337 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 396

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              V           DIS +  +I ++ R   +A + E+F  + +    PD       + 
Sbjct: 397 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIG 456

Query: 444 SYGKLREFETADDLYSEMQEEGC 466
           +Y + +++    +++ EM + GC
Sbjct: 457 AYSRRKQYNRCLEVFEEMIDAGC 479



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 146/293 (49%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  PS   Y +++    +A +  +A  +F EMR +   P+  T++ L+  F +EG+ + A
Sbjct: 198 RCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA 257

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               +Q+++  +  D+  Y+ L+E   +      A  IFS ++  G  PD  +YN M++ 
Sbjct: 258 EEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 317

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +G+A L ++A+ + E M+  G+ P   S+  LL+ Y    K  +   +  +M++     D
Sbjct: 318 YGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 377

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N M+++YG+L   +  + +  +M K      + +YN L+ +YG A  F     LFR
Sbjct: 378 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 437

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            +  + +  +VVT+ + I  Y +  ++ +   + +EM + G  P+  T   ++
Sbjct: 438 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVL 490



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 178/402 (44%), Gaps = 35/402 (8%)

Query: 122 PDLVAYNTMINVFGKAKLFKE--ARLLIEE--MREQGVKPDTVSYSTLLNLYVENHKFVE 177
           P+   ++ +INV  + +L K+  A +LI    +      PD + Y+ L++ Y +   + +
Sbjct: 57  PNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKK 116

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A S + E+ E  C     T  +++  Y    + + A+ +F  MRK G  PS V YN  + 
Sbjct: 117 AESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYID 176

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              +     +A+ +F  M+R   + +  TY  +I +YGK+ +   A  +  EM+++  +P
Sbjct: 177 GLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKP 236

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N  T++ ++  + + G  ++A  +F++L+ +G+E D   Y  ++ AY             
Sbjct: 237 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY------------- 283

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                             +RAG    A  +F      G   D + +  M++ + R   + 
Sbjct: 284 ------------------SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 325

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   VFE M+  G  P      L+L++Y +  +    +++ ++M + G      V   ML
Sbjct: 326 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 385

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           +LYG    F  +E +   ++          ++++  IY RA 
Sbjct: 386 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG 427



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 8/347 (2%)

Query: 195 TTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           TT + +I+V  QL + K  D +     W + +    P V+ YN L+  YG+  L+ +A  
Sbjct: 60  TTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAES 119

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            +  +          TY  ++K Y  S   EKA  +  EM+  G  P+A+ Y+  I    
Sbjct: 120 TYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLM 179

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G   +A  +F++++    +     Y  +I  Y +      A ++ HE+R    +PN  
Sbjct: 180 KGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNIC 239

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +   AR G  E+A  +F Q  +AG   D+  +  ++E +SR        E+F  M
Sbjct: 240 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 299

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           +  G  PD     +++++YG+    E A  ++  M+  G   + + H  +LS Y      
Sbjct: 300 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 359

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              E +  ++          + + +  +Y R  +      ++  M K
Sbjct: 360 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEK 406



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 1/229 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P V+AYN ++    RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 265 QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 324

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A +  + M++  ++  +  +  L+    +    +K   I +++  SGI PD    N+M
Sbjct: 325 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 384

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++G+   F++   ++  M +     D  +Y+ L+N+Y     F     +F  +   N 
Sbjct: 385 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 444

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP-SVVSYNTLLRV 238
             D+ T    I  Y +         +F  M   G  P    + N LL+V
Sbjct: 445 IPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVLLKV 493


>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
 gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
          Length = 1143

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 214/453 (47%), Gaps = 38/453 (8%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV  Y+++L+   R KQ  LA   F EM  + + PD   +ST+I  +   
Sbjct: 265 WMKLQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANA 324

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
            MFD                                   + ++++  + S GIVP  V Y
Sbjct: 325 EMFD-----------------------------------EMLTMYEAMMSRGIVPSSVTY 349

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            TM+    KA+   +A LL E++ E+ V+   ++Y+ ++ +Y +  +F EAL VF  M  
Sbjct: 350 TTMLIHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLG 409

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D    N+++ + G+L    +A  +F +M++  +  S  SY T+L +  +A+ F  
Sbjct: 410 AGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFEL 469

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  MQ K    + V Y ++I IYGK+  +++A  L QEM    +  +  T+S +  
Sbjct: 470 AASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMAN 529

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PN 364
           +  KAGK + A  + ++L + G+ +D   ++T++  Y + G V  A +    L +    +
Sbjct: 530 VRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIAD 589

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     +++ A    +E+A  +F+Q   +    D   FG M++L+      A   EV  
Sbjct: 590 LMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLR 649

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           +MR  G+ PD     +++N+YG+    E A  L
Sbjct: 650 QMREKGFTPDHITQGILINAYGEANRIEEAAGL 682



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/586 (22%), Positives = 249/586 (42%), Gaps = 110/586 (18%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            S ++Y  +L    +A ++ELA  +F +M+ +    D   Y+++I+ +GK G++D A    
Sbjct: 450  SKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLF 509

Query: 78   QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----------------- 120
            Q+M + R+  D+  +S +  +  K   Y++A+ +   L + G+                 
Sbjct: 510  QEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKA 569

Query: 121  -----------------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
                             + DL+AYN M++++ +  + ++A+LL ++++   ++PD V + 
Sbjct: 570  GNVERATKTFKTLVESGIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFG 629

Query: 164  TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA---------- 213
            T++ LY   +    A  V  +M E     D  T  I+I+ YG+ +  ++A          
Sbjct: 630  TMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKE 689

Query: 214  --------DRLFWSMRKMGIDPSVV--------------SYNTLLRVYGEAELFGEAIHL 251
                     R++  ++    D + +              +YN L   + +A     A  L
Sbjct: 690  DESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVPPAEML 749

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
               MQ K  +    T   +I  YGK+  +E  T L  E+       N   YS+++     
Sbjct: 750  HSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPR-----NNFVYSSMVGALIN 804

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---------- 361
              +L++AA L +K+R  G++ D VL   ++ AY + GLV  A  L+H  R          
Sbjct: 805  CNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVA 864

Query: 362  -----------------------------QPNTIPRETAITILARAGRIEEATWVFRQAF 392
                                         +P+    +T I++ A++GR  +A  +F+   
Sbjct: 865  YNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLK 924

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             AG   D  V+  M+  ++++  Y +  ++FE M+  G  P       ++++Y +  +F 
Sbjct: 925  SAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFA 984

Query: 453  TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             A+ L  EM + GC  S      ++S Y  R   N  E+  ER+ +
Sbjct: 985  KAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQT 1030



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 258/596 (43%), Gaps = 81/596 (13%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D + E    SP   AY +++    +  ++E A  +F+ M   G  PD   Y+ ++   GK
Sbjct: 371 DLVEESVELSP--LAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGK 428

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G +D A+     M++  +      Y+ ++ +  K   +  A SIFS ++      D V 
Sbjct: 429 LGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVV 488

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y ++I+++GKA L+ EA  L +EM E  +  D  ++S + N+ ++  K+ EA+ V  E+ 
Sbjct: 489 YTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELL 548

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                LD T    ++  Y +    + A + F ++ + GI   +++YN +L +Y E ++  
Sbjct: 549 AKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGI-ADLMAYNDMLSLYAEFDMLE 607

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  LF+ ++   I+ + V + TM+K+Y  +     A  ++++M+ +G  P+ IT   +I
Sbjct: 608 DAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILI 667

Query: 307 AIWGKAGKLDRAAMLFQKL----RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             +G+A +++ AA L +       S    I  +        +++  L+ H  R+L     
Sbjct: 668 NAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLH--RVLESFTL 725

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY------ 416
            +    +  I  L +AG++  A  +  +  D G   + S  G +I  + +  +Y      
Sbjct: 726 DSAAYNQLTINFL-KAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKL 784

Query: 417 --------------------ANVIE----VFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                                N +E    + EKMR  G   DS +++++LN+Y K    E
Sbjct: 785 KPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVE 844

Query: 453 TAD-----------------------------------DLYSEMQEEGCVFSDQVHFQML 477
            AD                                   D YS +   G   S Q +  M+
Sbjct: 845 DADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMI 904

Query: 478 SLYGARKDFNMLESLFERLDS-----DSNINKKELH-HVVAGIYERANRLNDASRI 527
           S++         E +F+ L S     D  +  + ++ +  +G+YE A  L +A ++
Sbjct: 905 SVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKL 960



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 181/374 (48%), Gaps = 9/374 (2%)

Query: 21   AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            AYN +  N L+A Q   A  L   M+ +G   +  T   LI  +GK G ++     L ++
Sbjct: 729  AYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEV----LTKL 784

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            + +    + V YS+++      +   KA  +  +++  G+  D V  + ++N + KA L 
Sbjct: 785  KPELPRNNFV-YSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLV 843

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            ++A  LI   R  G+  D V+Y+T++   +   +  +A+  ++ +  +     L T + M
Sbjct: 844  EDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTM 903

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            I V+ +    +DA+++F  ++  G  P    Y+ ++  Y ++ ++  A  LF  M+ + +
Sbjct: 904  ISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGL 963

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              + V+YN +I  Y ++ +  KA  L+ EM   G  P+++T+  +I+ +   GK + A  
Sbjct: 964  RPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAEN 1023

Query: 321  LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
              ++++++ +      Y  +++A+ R  L + A     ++     QP+ +   T I IL 
Sbjct: 1024 ALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILL 1083

Query: 377  RAGRIEEATWVFRQ 390
                 EE   ++++
Sbjct: 1084 EGSMFEEGLSLYKK 1097



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 155/330 (46%), Gaps = 36/330 (10%)

Query: 20   FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
            F Y+ ++  ++   Q E A GL ++MRQ G+  D    S L+  + K G+ + A + +  
Sbjct: 793  FVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHM 852

Query: 80   MEQDRVSGDLVLYSNLIE----------------------LARKLSDYSKAISIFSR--- 114
               D +  D+V Y+ +I+                      L   L  Y   IS+F++   
Sbjct: 853  ARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGR 912

Query: 115  ----------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
                      LKS+G  PD   Y+ M+N + K+ +++ A  L E M+ +G++P  VSY+ 
Sbjct: 913  TRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNN 972

Query: 165  LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
            L++ Y    +F +A  +  EM +  CP    T  ++I  Y       +A+     M+   
Sbjct: 973  LIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAA 1032

Query: 225  IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
            I P+V  YN ++  +  A L  +A+  +  M+R  I+ +VV+  TMI+I  +    E+  
Sbjct: 1033 IRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGL 1092

Query: 285  NLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +L ++ + + +  ++++   +  ++  AGK
Sbjct: 1093 SLYKKTEAKLVS-DSLSREMVAKLYQGAGK 1121



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 117/273 (42%), Gaps = 36/273 (13%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            PS+  Y+ ++    ++ +   A  +F +++  G  PD   YS ++ C+ K GM++ A   
Sbjct: 895  PSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADL 954

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             + M+   +    V Y+NLI+   +   ++KA  +   +  +G  P  V +  +I+ +  
Sbjct: 955  FEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAH 1014

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 EA   +E M+   ++P    Y                       NEV        
Sbjct: 1015 RGKCNEAENALERMQTAAIRPTVRHY-----------------------NEV-------- 1043

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                +  + +  +   A   +  M + GI P VVS  T++R+  E  +F E + L++  +
Sbjct: 1044 ----MLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLYKKTE 1099

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
             K +  + ++   + K+Y  + +H +A  ++++
Sbjct: 1100 AKLVSDS-LSREMVAKLYQGAGKHFEAKYILRQ 1131



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            + A + P    Y+ ++    ++  +E A  LF+ M+ RG+ P   +Y+ LI  + + G F
Sbjct: 924  KSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQF 983

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A   L +M +       V +  LI         ++A +   R++++ I P +  YN +
Sbjct: 984  AKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEV 1043

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
            +  F +A+L  +A     +M   G++PD VS  T++ + +E   F E LS++
Sbjct: 1044 MLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLY 1095


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 209/451 (46%), Gaps = 8/451 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN ++  +++    E  H L++EM   G   PD  TYS LI  FGK G  DS
Sbjct: 189 KCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDS 248

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AIS   +M+++ +     +Y+ ++ +  KL    KA+ +   +K  G    +  Y  +I 
Sbjct: 249 AISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA   +EA  +   M ++G KPD V  + L+NL  +  +  +A+ +F EM  + C  
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP 368

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFW--SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           ++ T N +I    +   A+ ++   W   M++ G+ PS  +Y+ L+  + +     +A+ 
Sbjct: 369 NVVTYNTVIKALFE-SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K        Y ++I   GK+  +E A  L QE++      +A  Y+ +I   G
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+L  A  LF +++  G   D   Y  ++    RVG+   A  LL  + +    P   
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           +  I+    AR G  + A  +F +  ++    D+  +  ++   SR   +    ++ ++M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            S G+  D    + +L + GK+ E  T   L
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDEDHTPAGL 638



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 8/448 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM--EQ 82
           +++ + +AK    A  +F +++ R   P   TY+++I    +EG  +       +M  E 
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
           D +  D V YS LI    KL     AIS+F  +K +G+ P    Y T++ ++ K    ++
Sbjct: 225 DCLP-DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEK 283

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L++EM+E+G      +Y+ L+    +  K  EA S+F  M +  C  D+   N +I+
Sbjct: 284 ALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLIN 343

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHLFRLMQRKEIE 261
           + G+     DA +LF  M  +   P+VV+YNT+++   E++    EA   +  M+   + 
Sbjct: 344 LLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVV 403

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + + A  L
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           FQ+LR +       +Y  MI    + G ++ A  L +E+++    P+       ++ + R
Sbjct: 464 FQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVR 523

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G  +EA  + R   + G   D++    ++  F+R       IE+F +M+++   PD   
Sbjct: 524 VGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVS 583

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
              VL    +   FE A  L  EM  +G
Sbjct: 584 YNTVLGCLSRAGMFEEAAKLMKEMNSKG 611



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 114/532 (21%), Positives = 227/532 (42%), Gaps = 80/532 (15%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           ++R    D  TY  LI C  + GM       +Q+M                         
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEM------------------------- 150

Query: 106 SKAISIFSRLKSSGIV--PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
                    ++S+ ++   DL   + ++ V GKAK+  +A  +  +++ +  KP + +Y+
Sbjct: 151 ---------VRSTCVIGPADL---SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYN 198

Query: 164 TLLNLYVENHKFVEALSVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           +++ + ++     +   ++ EM NE +C  D  T + +I  +G+L     A  LF  M++
Sbjct: 199 SMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKE 258

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P+   Y T+L +Y +     +A+ L + M+ K     V TY  +IK  GK+ + E+
Sbjct: 259 NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEE 318

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A ++   M   G +P+ +  + +I + GKAG+L  A  LF+++ S     + V Y T+I 
Sbjct: 319 AYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIK 378

Query: 343 A-YERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEV 397
           A +E     + A     ++++   +P     +IL     +  R+E+A  +  +  + G  
Sbjct: 379 ALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFA 438

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
              + +  +I    + K+Y    E+F+++R    +  + + A+++   GK      A DL
Sbjct: 439 PCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDL 498

Query: 458 YSEMQEEGC-----------------VFSDQVH--FQMLSLYGARKDFNMLE-------- 490
           ++EM++ GC                   +D+ H   + +   G   D N           
Sbjct: 499 FNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFAR 558

Query: 491 --------SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                    +F R+ +         ++ V G   RA    +A+++M  MN +
Sbjct: 559 TGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSK 610



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 1/267 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           E  + +P+V  YN V++ +  +K +   A   +++M++ G+ P  +TYS LI  F K   
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A+  L++M++   +     Y +LI    K   Y  A  +F  L+ +        Y  
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAV 481

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI   GK     EA  L  EM++ G  PD  +Y+ L++  V      EA S+   M E  
Sbjct: 482 MIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG 541

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  DL + NI+++ + +    K A  +F  M+   I P VVSYNT+L     A +F EA 
Sbjct: 542 CTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAA 601

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            L + M  K  E +++TY+++++  GK
Sbjct: 602 KLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  ++P   AY  ++  + +AK++E A+ LF E+R+         Y+ +
Sbjct: 424 KALLLLEEMDEKG-FAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G    A+    +M++   + D+  Y+ L+    ++    +A S+   ++ +G 
Sbjct: 483 IKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL ++N ++N F +    K A  +   M+   +KPD VSY+T+L        F EA  
Sbjct: 543 TPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAK 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN      DL T + +++  G++D
Sbjct: 603 LMKEMNSKGFEYDLITYSSILEAVGKID 630



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P + ++N++L    R    + A  +F  M+   I PD  +Y+T++ C  + GMF
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKA 108
           + A   +++M       DL+ YS+++E   K+  D++ A
Sbjct: 598 EEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPA 636


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFDSAI 74
           P+VF+YN++L+ +    + + A  L   M   G    PD  +Y+T+I  F KEG  D A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    +  ++V YS++I    K     KA+ + + +  +G++P+   YN++++ +
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +   KEA   +++M   GV+PD V+Y++L++   +N +  EA  +F  M +     ++
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   ++  Y       +   L   M + GI P+   ++ L+  Y +     +A+ +F  
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+++ +  + VTY T+I I  KS   E A    ++M +  + P  I Y+++I       K
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            D+A  L  ++   G+ +D + + ++I ++ + G V  +++L   +     +P+ I   T
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     AG+++EAT +       G   D   +  +I  + +  +  + + +F +M S+G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD     ++L    + R    A +LY  + E G
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 213/490 (43%), Gaps = 39/490 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  V+    +    + A+G + EM  RGI P+  TYS++I    K    D A+  
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ V  +   Y++++          +AI    ++ S G+ PD+V YN++++   K
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR + + M ++G+KP+  +Y TLL  Y      VE   +   M       +   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I  Y +      A  +F  MR+ G++P  V+Y T++ +  ++    +A+  F  M 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--------------------- 295
            + +    + YN++I       + +KA  L+ EM +RGI                     
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 296 --------------EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                         +P+ ITYST+I  +  AGK+D A  L   + S G++ D V Y T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+      P+ I     +  L +  R   A  ++    ++G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++S +  ++    +N      + +F+ +       ++    +++ +  K+   + A DL
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 458 YSEMQEEGCV 467
           ++ +   G V
Sbjct: 677 FAALSANGLV 686



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 4/396 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ P+  TY TL+  +  +G        
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S LI    K     +A+ +FS+++  G+ PD V Y T+I +  K
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A    E+M ++ + P  + Y++L++      K+ +A  +  EM +    LD   
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++++LF  M ++G+ P +++Y+TL+  Y  A    EA  L   M 
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y K    E A  L +EM++ G+ P+ ITY+ I+    +  +  
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L+  +  SG +++   Y  ++    +  L   A R+   L     Q  T      I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             L + GR +EA  +F      G V D+  +  M E
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 195/440 (44%), Gaps = 11/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
           S++  N  L +V R      A   ++ M + G   + P+  TY  LI      G  D   
Sbjct: 53  SIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGF 111

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + L  + +     D + ++ L++        S A+ I   R+   G +P++ +YN ++  
Sbjct: 112 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKG 171

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                  +EA  L++ M + G    PD VSY+T++N + +     +A   + EM +    
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGIL 231

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T + +I    +      A  +  SM K G+ P+  +YN+++  Y  +    EAI  
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M    +E +VVTYN+++    K+    +A  +   M  RG++P   TY T++  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G L     L   +  +G+  +  ++  +I AY + G V  A  +  ++RQ    P+T+ 
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I IL ++GR+E+A   F Q  D        V+  +I       K+    E+  +M 
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 428 SAGYFPDSHIIALVLNSYGK 447
             G   D+     +++S+ K
Sbjct: 472 DRGICLDTIFFNSIIDSHCK 491



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 165/369 (44%), Gaps = 43/369 (11%)

Query: 106 SKAISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           + A+S ++R+  +G   + P+L  Y  +I     A         +  + ++G + D +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + LL     + +  +A+                                  D +   M +
Sbjct: 130 TPLLKGLCADKRTSDAM----------------------------------DIVLRRMTQ 155

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQNVVTYNTMIKIYGKSLEH 280
           +G  P+V SYN LL+   +     EA+ L ++M     +   +VV+Y T+I  + K  + 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +KA     EM +RGI PN +TYS+IIA   KA  +D+A  +   +  +GV  +   Y ++
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y   G    A   L ++     +P+ +   + +  L + GR  EA  +F      G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +I+ +G +++ ++       +  + + M   G  P+ ++ ++++ +Y K  + + A  
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 457 LYSEMQEEG 465
           ++S+M+++G
Sbjct: 396 VFSKMRQQG 404



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP    YN ++ ++    +W+ A  L  EM  RGI  D   ++++I    KEG   
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            +      M +  V  D++ YS LI+   LA K+ + +K   + + + S G+ PD V YN
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK---LLASMVSVGMKPDCVTYN 553

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+IN + K    ++A +L  EM   GV PD ++Y+ +L    +  +   A  ++  + E 
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              L+L+T NI++    + ++  +A R+F ++    +     ++N ++    +     EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             LF  +    +  +V TY+ M +   +    E+  +L   M+  G   N+   ++I+  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 309 WGKAGKLDRAA 319
             + G + RA 
Sbjct: 734 LLQRGDITRAG 744



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/193 (19%), Positives = 90/193 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I    K+    +A  +F+ L ++G+VPD+  Y+ M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +  L +E   L   M E G   ++   ++++   ++      A +    ++E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 191 PLDLTTCNIMIDV 203
            L+ +T ++ +D+
Sbjct: 756 SLEASTASLFLDL 768


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 206/458 (44%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN V+  +++  Q E  H ++ EM   G   PD  TYS LI+ + K G  DS
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI    +M+ + +     +Y+ L+ +  K+    KA+ +F  +K +G  P +  Y  +I 
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA   +EA  L + M   G+ PD V  + L+N+  +  +  E  +VF EM    C  
Sbjct: 312 GLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRC-- 369

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHL 251
                                             P+VVSYNT+++   E++    E    
Sbjct: 370 ---------------------------------TPTVVSYNTVIKALFESKAPVSEVSSW 396

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   +  +  TY+ +I  Y K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 397 FDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A + + A  LF++L+ +   +   +Y  MI  + + G ++ A  L +E++   + P   A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              L     +AG + EA  + R+  + G   DI+    ++  F+R       IE+FE M+
Sbjct: 517 YNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMK 576

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  PD      +L  +     FE A  L  EM+++G
Sbjct: 577 HCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKG 614



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 178/352 (50%), Gaps = 6/352 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD   E  R   SP+V+ Y  +++ + +A + E A+ L+  M   G+ PD    + L+  
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNI 347

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVP 122
            GK G  +   +   +M   R +  +V Y+ +I+ L    +  S+  S F ++K+ G+ P
Sbjct: 348 LGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSP 407

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
               Y+ +I+ + K    ++A LL+EEM E+G  P   +Y +L+N   +  ++  A  +F
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            E+ E    +      +MI  +G+     +A  LF  M+  G  P V +YN L+    +A
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +  EA  L R M+      ++ ++N ++  + ++    +A  + + M++ GI+P+ +TY
Sbjct: 528 GMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTY 587

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +T++  +  AG  + AA L ++++  G E D + Y +++ A   VG + H K
Sbjct: 588 NTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA---VGNMDHEK 636



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 229/502 (45%), Gaps = 19/502 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSD 104
           ++R    D  TY  LI C  +  ++      +Q++ ++  VS   V+ S L++   +   
Sbjct: 118 KRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKM 177

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYS 163
            SKA+S+F + K     P    YN++I +  +    ++   +  EM  +G   PDT++YS
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNC--PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
            L++ Y +  +   A+ +F EM + NC  P +      ++ +Y ++   + A  LF  M+
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKD-NCMQPTE-KIYTTLLGIYFKVGKVEKALDLFEEMK 295

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G  P+V +Y  L++  G+A    EA  L++ M    +  +VV  N ++ I GK    E
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLE 355

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + TN+  EM      P  ++Y+T+I A++     +   +  F K+++ GV      Y  +
Sbjct: 356 ELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSIL 415

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +   V  A  LL E+ +    P   A    I  L +A R E A  +F++  +   
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+ F +  K +  +++F +M++ G  PD +    +++   K      A+ 
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANS 535

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYG----ARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           L  +M+E GC      H  +L+ +      R+   M E++         +     ++ + 
Sbjct: 536 LLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVT----YNTLL 591

Query: 513 GIYERANRLNDASRIMNRMNKR 534
           G +  A    +A+R+M  M  +
Sbjct: 592 GCFAHAGMFEEAARLMREMKDK 613



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 1/212 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK++E A+ LF E+++         Y+ +
Sbjct: 427 KALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G    A+    +M+      D+  Y+ L+    K    ++A S+  +++ +G 
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGC 545

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             D+ ++N ++N F +  + + A  + E M+  G+KPD V+Y+TLL  +     F EA  
Sbjct: 546 TADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAAR 605

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +  EM +     D  T + ++D  G +D  KD
Sbjct: 606 LMREMKDKGFEYDAITYSSILDAVGNMDHEKD 637


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 251/530 (47%), Gaps = 14/530 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++ S+ A N ++ +++R    ELA G++ E+ + G+  + YT + ++    K+G  +   
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           ++L Q+++  V  D+V Y+ LI          +A  + + +   G  P +  YNT+IN  
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   ++ A+ +  EM   G+ PD+ +Y +LL    +    VE   VF++M   +   DL
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              + M+ ++ +      A   F S+++ G+ P  V Y  L++ Y    +   A++L   
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M ++    +VVTYNT++    K     +A  L  EM  R + P++ T + +I    K G 
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L  A  LFQK++   + +D V Y T++  + +VG +  AK +  ++     +P   + +I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L  A    G + EA  V+ +         + +   MI+ + R+   ++     EKM S G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615

Query: 431 YFPDSHIIALVLNSYGKLRE--FETADDLYSEMQEE-GCVFSDQVHFQMLSLYGARKDFN 487
           + PD   I+     YG +RE     A  L  +M+EE G +  D   +  + L+G  +   
Sbjct: 616 FVPDC--ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI-LHGFCRQNQ 672

Query: 488 MLES---LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           M E+   L + ++   N ++     ++ G   + N L +A RI + M +R
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN-LTEAFRIHDEMLQR 721



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 202/426 (47%), Gaps = 6/426 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP V+ YN V+  + +  ++E A  +F EM + G++PD  TY +L+    K+G      
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M    V  DLV +S+++ L  +  +  KA+  F+ +K +G++PD V Y  +I  +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +  +   A  L  EM +QG   D V+Y+T+L+   +     EA  +F EM E     D 
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I+ID + +L   ++A  LF  M++  I   VV+YNTLL  +G+      A  ++  
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  KEI    ++Y+ ++          +A  +  EM ++ I+P  +  +++I  + ++G 
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------PNTIPR 368
                   +K+ S G   D + Y T+I  + R   ++ A  L+ ++ +      P+    
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + +    R  +++EA  V R+  + G   D S + CMI  F           + ++M  
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720

Query: 429 AGYFPD 434
            G+ PD
Sbjct: 721 RGFSPD 726



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 218/468 (46%), Gaps = 11/468 (2%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L  + E+  Y P +  YN ++         E A  L + M  +G +P  YTY+T+I    
Sbjct: 258 LSQVQEKGVY-PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G ++ A     +M +  +S D   Y +L+  A K  D  +   +FS ++S  +VPDLV
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +++M+++F ++    +A +    ++E G+ PD V Y+ L+  Y        A+++  EM
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL- 244
            +  C +D+ T N ++    +  M  +AD+LF  M +  + P   SY   + + G  +L 
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD--SYTLTILIDGHCKLG 494

Query: 245 -FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A+ LF+ M+ K I  +VVTYNT++  +GK  + + A  +  +M ++ I P  I+YS
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            ++      G L  A  ++ ++ S  ++   ++  +MI  Y R G  +  +  L ++   
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFD--AGEVKDISVFGCMIELFSRNKKYA 417
              P+ I   T I    R   + +A  + ++  +   G V D+  +  ++  F R  +  
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               V  KM   G  PD      ++N +        A  ++ EM + G
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 9/359 (2%)

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
           S FS   S+  V DL     +I  + +A+  +EA      +R +G      + + L+   
Sbjct: 156 STFSNCGSNDSVFDL-----LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
           V       A  V+ E++     +++ T NIM++   +    +        +++ G+ P +
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+YNTL+  Y    L  EA  L   M  K     V TYNT+I    K  ++E+A  +  E
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   G+ P++ TY +++    K G +     +F  +RS  V  D V + +M+  + R G 
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390

Query: 350 VAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +  A    + +++   IP     TIL     R G I  A  +  +    G   D+  +  
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           ++    + K      ++F +M     FPDS+ + ++++ + KL   + A +L+ +M+E+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 177/367 (48%), Gaps = 7/367 (1%)

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           ARKL +  +A   F+ L+S G    + A N +I    +    + A  + +E+   GV  +
Sbjct: 178 ARKLREAHEA---FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             + + ++N   ++ K  +  +  +++ E     D+ T N +I  Y    + ++A  L  
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
           +M   G  P V +YNT++    +   +  A  +F  M R  +  +  TY +++    K  
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           +  +   +  +M++R + P+ + +S++++++ ++G LD+A M F  ++ +G+  D V+Y 
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414

Query: 339 TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
            +I  Y R G+++ A  L +E+ Q     + +   T +  L +   + EA  +F +  + 
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
               D      +I+   +     N +E+F+KM+      D      +L+ +GK+ + +TA
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 455 DDLYSEM 461
            +++++M
Sbjct: 535 KEIWADM 541



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 36/78 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P VF YN +L    R  Q + A  +  +M +RG+ PDR TY+ +I  F  +   
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708

Query: 71  DSAISWLQQMEQDRVSGD 88
             A     +M Q   S D
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 212/420 (50%), Gaps = 14/420 (3%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ +N+V+       Q  LA  +  +M + G  PDR T  +L+  F +      A+S + 
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +     D+V Y+ +I+   K    + A   F  ++  GI P++V Y  ++N    + 
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + +A  L+ +M ++ + P+ ++YS LL+ +V+N K +EA  +F EM  ++   D+ T +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+     D   +A+++F  M   G    VVSYNTL+  + +A+   + + LFR M ++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I+ + ++ + +KA     +M   GI P+  TY+ ++      G+L++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
            ++F+ ++   +++D V Y T+I    + G V  A  L   L     +P+ +   T ++ 
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479

Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           L   G + E   ++ +    G +K D ++    I L +         E+ +KM S GY P
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA---------ELIKKMLSCGYAP 530



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 175/359 (48%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P       ++    R  +   A  L D+M + G  PD   Y+ +I    K    + A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + +++E+  +  ++V Y+ L+      S +S A  + S +    I P+++ Y+ +++ F
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA+ L EEM    + PD V+YS+L+N    + +  EA  +F  M    C  D+
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +I+ + +    +D  +LF  M + G+  + V+YNTL++ + +A    +A   F  
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M    I  ++ TYN ++     + E EKA  + ++MQ R ++ + +TY+T+I    K GK
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++ A  LF  L   G++ D V Y TM+      GL+   + L  +++Q   +  +  ++
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 162/319 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P + AYN ++ ++ + K+   A   F E+ ++GI P+  TY+ L+        + 
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L  M + +++ +++ YS L++   K     +A  +F  +    I PD+V Y+++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA  + + M  +G   D VSY+TL+N + +  +  + + +F EM++    
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + Q      A   F  M   GI P + +YN LL    +     +A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  MQ++E++ ++VTY T+I+   K+ + E+A +L   +  +G++P+ +TY+T+++    
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 312 AGKLDRAAMLFQKLRSSGV 330
            G L     L+ K++  G+
Sbjct: 483 KGLLHEVEALYTKMKQEGL 501



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 4/431 (0%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    +V ++ L+    KL  Y   IS+  +++  GI  DL  +N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN F        A  ++ +M + G +PD V+  +L+N +   ++  +A+S+  +M E+ 
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   N +ID   +     DA   F  + + GI P+VV+Y  L+     +  + +A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M +K+I  NV+TY+ ++  + K+ +  +A  L +EM    I+P+ +TYS++I   
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
               ++D A  +F  + S G   D V Y T+I  + +   V    +L  E+ Q     NT
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I    +AG +++A   F Q    G   DI  +  ++     N +    + +FE 
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+      D      V+    K  + E A  L+  +  +G       +  M+S    +  
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 486 FNMLESLFERL 496
            + +E+L+ ++
Sbjct: 486 LHEVEALYTKM 496



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 201/453 (44%), Gaps = 15/453 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           LR  +   A  LF +M +    P    ++ L++   K   +D  IS  ++ME   +  DL
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             ++ +I         S A+SI  ++   G  PD V   +++N F +     +A  L+++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E G KPD V+Y+ +++   +  +  +A   F E+       ++ T   +++       
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA RL   M K  I P+V++Y+ LL  + +     EA  LF  M R  I+ ++VTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I         ++A  +   M ++G   + ++Y+T+I  + KA +++    LF+++   G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           +  + V Y T+I  + + G V  A+    ++      P+       +  L   G +E+A 
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV---L 442
            +F          DI  +  +I    +  K      +F  +   G  PD      +   L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 443 NSYGKLREFETADDLYSEMQEEG-----CVFSD 470
            + G L E E    LY++M++EG     C  SD
Sbjct: 481 CTKGLLHEVEA---LYTKMKQEGLMKNDCTLSD 510



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 45/319 (14%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + + +P+V  Y+ +L   ++  +   A  LF+EM +  I PD  TYS+LI          
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN--------- 303

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                            L L+  + E          A  +F  + S G + D+V+YNT+I
Sbjct: 304 ----------------GLCLHDRIDE----------ANQMFDLMVSKGCLADVVSYNTLI 337

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F KAK  ++   L  EM ++G+  +TV+Y+TL+  + +     +A   F++M+     
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T NI++         + A  +F  M+K  +D  +V+Y T++R   +     EA  L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 252 FRLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           F  +  K ++ ++VTY TM+  +  K L HE    L  +M+  G+  N  T S       
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGLMKNDCTLSD------ 510

Query: 311 KAGKLDRAAMLFQKLRSSG 329
             G +  +A L +K+ S G
Sbjct: 511 --GDITLSAELIKKMLSCG 527


>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
           splicing isoforms [Oryza sativa Japonica Group]
 gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 884

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+    +  +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 152 KSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYS 211

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   FD A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 212 TLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARG 271

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 272 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 331

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM       +  T   +  +YG+    +DA +L+  MR+  +    +  NTLL 
Sbjct: 332 ARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLS 391

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L GEA  LF  M+  ++    + +  +Y  MI IYG S + ++A  L  EM   
Sbjct: 392 MCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVES 451

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKAG++  A  + +   + G++ D
Sbjct: 452 GIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 491



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+   L++   G  P D + +N  +     A+ + +A  L  +M   GV  D ++
Sbjct: 150 WRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNIT 209

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 210 YSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRA 269

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 270 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 329

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM   G+EPNA T + +  I+G+A     A  L++++R   +  D +L  T+
Sbjct: 330 GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTL 389

Query: 341 IVAYERVGLVAHAKRLLHELRQPN--TIPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLV  A++L  E++ P+   +P+         I I   +G  + A  +F +  
Sbjct: 390 LSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMV 449

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           ++G   +I  +  +I+   +  +    ++V E   + G  PD  +   +L+
Sbjct: 450 ESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLS 500



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 4/196 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM   G+ P+  T + L   +G+     
Sbjct: 306 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGR 365

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+   +QM + ++  D +L + L+ +   +    +A  +FS +K   +     PD  +Y
Sbjct: 366 DALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSY 425

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G +     A  L  EM E G++P+ +SY+ ++    +  +  EA+ V      
Sbjct: 426 TAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 485

Query: 188 VNCPLDLTTCNIMIDV 203
                D   C  ++ V
Sbjct: 486 KGLKPDDRLCGCLLSV 501



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/380 (19%), Positives = 156/380 (41%), Gaps = 39/380 (10%)

Query: 156 KPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            P T     LLN L+    K +  L     + +   PLD    N+ +           A+
Sbjct: 133 PPSTSDALLLLNYLHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAE 192

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNTMIKI 273
           RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VTY+ ++ +
Sbjct: 193 RLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDV 252

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R  G++ +
Sbjct: 253 YAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPN 312

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +Y  ++ A  + G    A+ L  E+      P    +T LA+                
Sbjct: 313 IFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAK---------------- 356

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                          ++ R +   + ++++E+MR      D+ +   +L+    +     
Sbjct: 357 ---------------IYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADVGLVGE 401

Query: 454 ADDLYSEMQEE--GCVFSDQ--VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           A+ L+SEM++   G V       +  M+++YG+  D +    LF  +  +S I    + +
Sbjct: 402 AEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM-VESGIEPNIMSY 460

Query: 510 -VVAGIYERANRLNDASRIM 528
            +V     +A R+ +A  ++
Sbjct: 461 TIVIQCLGKAGRIQEAVDVL 480



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 1/173 (0%)

Query: 364 NTIPRETAITILARAGRIEEAT-WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           + I   T IT   R  + ++A  W  R     G + D   +  +++++++      V+ +
Sbjct: 206 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 265

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++ R +G+ PD    A++   +G+  +++    ++ EM+E G   +  V+  +L   G 
Sbjct: 266 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 325

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
                +  +LFE + ++           +A IY RA    DA ++  +M +++
Sbjct: 326 TGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 378


>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
 gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
           splicing isoforms [Oryza sativa Japonica Group]
 gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
 gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
          Length = 640

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+    +  +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 92  KSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYS 151

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   FD A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 152 TLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARG 211

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 212 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 271

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM       +  T   +  +YG+    +DA +L+  MR+  +    +  NTLL 
Sbjct: 272 ARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLS 331

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L GEA  LF  M+  ++    + +  +Y  MI IYG S + ++A  L  EM   
Sbjct: 332 MCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVES 391

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKAG++  A  + +   + G++ D
Sbjct: 392 GIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 431



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+   L++   G  P D + +N  +     A+ + +A  L  +M   GV  D ++
Sbjct: 90  WRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNIT 149

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 150 YSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRA 209

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 210 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 269

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM   G+EPNA T + +  I+G+A     A  L++++R   +  D +L  T+
Sbjct: 270 GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTL 329

Query: 341 IVAYERVGLVAHAKRLLHELRQPN--TIPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLV  A++L  E++ P+   +P+         I I   +G  + A  +F +  
Sbjct: 330 LSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMV 389

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           ++G   +I  +  +I+   +  +    ++V E   + G  PD  +   +L+
Sbjct: 390 ESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLS 440



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 4/196 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM   G+ P+  T + L   +G+     
Sbjct: 246 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGR 305

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+   +QM + ++  D +L + L+ +   +    +A  +FS +K   +     PD  +Y
Sbjct: 306 DALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSY 365

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G +     A  L  EM E G++P+ +SY+ ++    +  +  EA+ V      
Sbjct: 366 TAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 425

Query: 188 VNCPLDLTTCNIMIDV 203
                D   C  ++ V
Sbjct: 426 KGLKPDDRLCGCLLSV 441



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/380 (19%), Positives = 156/380 (41%), Gaps = 39/380 (10%)

Query: 156 KPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            P T     LLN L+    K +  L     + +   PLD    N+ +           A+
Sbjct: 73  PPSTSDALLLLNYLHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAE 132

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNTMIKI 273
           RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VTY+ ++ +
Sbjct: 133 RLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDV 192

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R  G++ +
Sbjct: 193 YAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPN 252

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +Y  ++ A  + G    A+ L  E+      P    +T LA+                
Sbjct: 253 IFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAK---------------- 296

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                          ++ R +   + ++++E+MR      D+ +   +L+    +     
Sbjct: 297 ---------------IYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADVGLVGE 341

Query: 454 ADDLYSEMQEE--GCVFSDQ--VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           A+ L+SEM++   G V       +  M+++YG+  D +    LF  +  +S I    + +
Sbjct: 342 AEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM-VESGIEPNIMSY 400

Query: 510 -VVAGIYERANRLNDASRIM 528
            +V     +A R+ +A  ++
Sbjct: 401 TIVIQCLGKAGRIQEAVDVL 420



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 1/173 (0%)

Query: 364 NTIPRETAITILARAGRIEEAT-WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           + I   T IT   R  + ++A  W  R     G + D   +  +++++++      V+ +
Sbjct: 146 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 205

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++ R +G+ PD    A++   +G+  +++    ++ EM+E G   +  V+  +L   G 
Sbjct: 206 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 265

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
                +  +LFE + ++           +A IY RA    DA ++  +M +++
Sbjct: 266 TGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 318


>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 174/323 (53%), Gaps = 7/323 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P   AYN +L+  ++    + A  +  EM + G +PD +TYS LI  +   G +
Sbjct: 389 KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRW 448

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +SA   L++ME   V  +  ++S ++   R    + K+  +   +++SG+ PD   YN M
Sbjct: 449 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 508

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ FGK      A    + MR +GV+PD V+++TL++ + ++    +A  +F  M E  C
Sbjct: 509 IDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGC 568

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
               TT NIMI+ +G+ +  +D   L   M+  G+  +VV+Y TL    G +E   +AI+
Sbjct: 569 SPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL----GLSE---QAIN 621

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR+M+   ++ +V+  N++I  +G+     +A +++Q M+   ++P+ +TY+T++    
Sbjct: 622 AFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALI 681

Query: 311 KAGKLDRAAMLFQKLRSSGVEID 333
           +  K D+   +++++  SG   D
Sbjct: 682 RVEKFDKVPAVYEEMTLSGCTPD 704



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 205/460 (44%), Gaps = 13/460 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R + +   YN ++    R    E A  L   MR+ G   D   YS +I    +    DS 
Sbjct: 250 RQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDS- 308

Query: 74  ISWLQ----QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            S LQ    ++E D++  D  L +++I    K  D ++A+S  + ++ +G+ P       
Sbjct: 309 -SMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVA 367

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I   G A   +EA  + EE++E G+ P T +Y+ LL  YV+     +A S+ +EM    
Sbjct: 368 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 427

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D  T +++ID Y      + A  +   M   G+ P+   ++ +L  Y +   + ++ 
Sbjct: 428 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 487

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKS--LEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            + R M+   +  +   YN MI  +GK   L+H  AT     M+  G++P+A+T++T+I 
Sbjct: 488 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT--FDRMRMEGVQPDAVTWNTLID 545

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              K+G  ++A  LF+ ++ SG       Y  MI ++         K LL +++    + 
Sbjct: 546 CHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 605

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                T L   G  E+A   FR     G    + V   +I  F  +++ A    V + M+
Sbjct: 606 NVVTYTTL---GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMK 662

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
                PD      ++ +  ++ +F+    +Y EM   GC 
Sbjct: 663 ENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCT 702



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G++P   T   +IT  G  G  + A +  +++++  +      Y+ L++   K      A
Sbjct: 357 GLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDA 416

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            SI S ++ SG  PD   Y+ +I+ +  A  ++ AR++++EM   GV+P++  +S +L  
Sbjct: 417 ESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILAS 476

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +  K+ ++  V  EM       D    N+MID +G+ +    A   F  MR  G+ P 
Sbjct: 477 YRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 536

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V++NTL+  + ++    +A  LF  MQ         TYN MI  +G+    E    L+ 
Sbjct: 537 AVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 596

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           +MQ++G+  N +TY+T+       G  ++A   F+ +R+ G++   ++  ++I A+    
Sbjct: 597 KMQSQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDR 649

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
             A A  +L  +++    P+ +   T +  L R  + ++   V+ +   +G   D
Sbjct: 650 RDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 704



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 143/307 (46%), Gaps = 13/307 (4%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L QR+ +    +TYN +I    ++ + EKA NLM  M+
Sbjct: 228 YSILIHALGRSEKLYEA---FLLSQRQTL--TPLTYNALIGACARNDDLEKALNLMSRMR 282

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G   + + YS II    +  K D + +  ++ ++ S  +E+D  L   +IV + + G 
Sbjct: 283 RDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 342

Query: 350 VAHAKRLLHELRQPNTIPRETA-----ITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           V  A   L  + Q N +  +TA     IT L  AGR EEA  +F +  + G +     + 
Sbjct: 343 VNRAMSFL-AMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYN 401

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +++ + +     +   +  +M  +G+ PD H  +L++++Y     +E+A  +  EM+  
Sbjct: 402 ALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS 461

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G   +  V  ++L+ Y  R  +     +   + +      +  ++V+   + + N L+ A
Sbjct: 462 GVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHA 521

Query: 525 SRIMNRM 531
               +RM
Sbjct: 522 LATFDRM 528



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/376 (19%), Positives = 161/376 (42%), Gaps = 33/376 (8%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL--SVF 182
           + YN +I    +    ++A  L+  MR  G   D V+YS ++      +K   ++   ++
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           AE+      LD    N +I  + +      A      ++  G+ P   +   ++   G A
Sbjct: 316 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 375

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  +F  ++   +      YN ++K Y K+   + A +++ EM+  G  P+  TY
Sbjct: 376 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S +I  +  AG+ + A ++ +++ +SGV  +  ++  ++ +Y   G    + ++L E+R 
Sbjct: 436 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR- 494

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
                                         ++G   D   +  MI+ F +     + +  
Sbjct: 495 ------------------------------NSGVSPDRHFYNVMIDTFGKCNCLDHALAT 524

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++MR  G  PD+     +++ + K      A++L+  MQE GC      +  M++ +G 
Sbjct: 525 FDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGE 584

Query: 483 RKDFNMLESLFERLDS 498
           ++ +  +++L  ++ S
Sbjct: 585 QERWEDVKTLLGKMQS 600


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 228/495 (46%), Gaps = 45/495 (9%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  P+V  ++ +   + + KQ++L   L  +M  +GIA + YT S +I CF +      
Sbjct: 82  SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S + ++ +     + + +S LI         S+A+ +  R+   G  PDL+  NT++N
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               +    EA LLI++M E G +P+ V+Y  +LN+  ++ +   A+ +  +M E N  L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 193 DLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D    +I+ID    +G LD   +A  LF  M   GI  ++++YN L+  +  A  + +  
Sbjct: 262 DAVKYSIIIDGLCKHGSLD---NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L R M +++I  NVVT++ +I  + K  +  +A  L +EM +RGI P+ ITY+++I  +
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 310 GKAGKLDRAAM-----------------------------------LFQKLRSSGVEIDP 334
            K   LD+A                                     LF+K+   GV  D 
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T+I  +  +G +  AK L  E+      PN +  +  +  L   G  E+A  +F +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
              +    DI ++  +I       K  +  ++F  +   G  P      +++    K   
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558

Query: 451 FETADDLYSEMQEEG 465
              A+ L+ +M+E+G
Sbjct: 559 LSEAELLFRKMEEDG 573



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 213/445 (47%), Gaps = 6/445 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P +   N ++  +  + +   A  L D+M + G  P+  TY  ++    K G   
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L++ME+  +  D V YS +I+   K      A ++F+ ++  GI  +++ YN +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F  A  + +   L+ +M ++ + P+ V++S L++ +V+  K  EA  +  EM      
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   +ID + + +    A+++   M   G DP++ ++N L+  Y +A    + + L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  + VTYNT+I+ + +  +   A  L QEM +R + PN +TY  ++     
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+ ++A  +F+K+  S +E+D  +Y  +I        V  A  L   L     +P    
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G + EA  +FR+  + G   D   +  +I     +      +++ E+++
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605

Query: 428 SAGYFPDSHIIALVLN--SYGKLRE 450
             G+  D+  I +V++  S G+L++
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGRLKK 630



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 173/355 (48%), Gaps = 6/355 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE         Y++++  + +    + A  LF+EM  +GI  +  TY+ LI  F   G +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L+ M + +++ ++V +S LI+   K     +A  +   +   GI PD + Y ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K     +A  +++ M  +G  P+  +++ L+N Y + ++  + L +F +M+    
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
             D  T N +I  + +L     A  LF  M    + P++V+Y  LL      GE+E   +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE---K 491

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  +++ ++E ++  YN +I     + + + A +L   +  +G++P   TY+ +I 
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
              K G L  A +LF+K+   G   D   Y  +I A+   G    + +L+ EL++
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 60/131 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+++    +  YN+++  +  A + + A  LF  +  +G+ P   TY+ +I    K+G  
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    ++ME+D  + D   Y+ LI       D +K++ +   LK  G   D      +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619

Query: 131 INVFGKAKLFK 141
           I++    +L K
Sbjct: 620 IDMLSDGRLKK 630


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 227/486 (46%), Gaps = 6/486 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN++++   R KQ++ A  L + M  +G +PD ++Y TLI    K G    A+ 
Sbjct: 121 SPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK 180

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVF 134
              +M +  V+ D+  Y+ LI+   K  D   A  I+ RL K   + P++ +YN MIN  
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F E+  +   M++     D  +YSTL++    +     A  V+ EM E     D+
Sbjct: 241 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N M++ Y +    ++   L+  M K G   +VVSYN L+R   E     EAI ++ L
Sbjct: 301 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWEL 359

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  K+   + +TY  ++    K+    KA ++++E +N   + +   YS++I    + G+
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           LD  A +  ++   G + +P +   +I  + R   +  A R    +      P  +   T
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L++A R  EA  + ++    G   ++  +  ++    + KK    + ++ +    G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
           + PD  +  ++++      + E A  LYSEM++  CV +   H  ++  +   +DF    
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS 599

Query: 491 SLFERL 496
            +++ +
Sbjct: 600 KIWDHI 605



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 222/473 (46%), Gaps = 14/473 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +YN +L  ++ + +W+ A   F      G++P+  TY+ LI    ++  FD A   
Sbjct: 87  PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN-VFG 135
           L  M     S D+  Y  LI    K    S A+ +F  +   G+ PD+  YN +I+  F 
Sbjct: 147 LNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 206

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  +   + +    ++   V P+  SY+ ++N   +  KF E+  ++  M +     DL 
Sbjct: 207 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266

Query: 196 TCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T + +I      G LD    A R++  M + G+ P VV YNT+L  Y  A    E + L+
Sbjct: 267 TYSTLIHGLCGSGNLD---GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 323

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           ++M+ KE  + VV+YN +I+   ++ + ++A ++ + +  +    +++TY  ++    K 
Sbjct: 324 KVME-KEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 382

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           G L++A  + ++  +   ++D   Y +MI    R G +     +L ++     +PN    
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I    RA ++E+A   F      G    +  +  +I   S+ ++++    + ++M  
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            G+ P+    +L++N   + ++ + A +L+ +  E+G  F   V    + ++G
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG--FKPDVKMHNIIIHG 553



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/514 (22%), Positives = 222/514 (43%), Gaps = 46/514 (8%)

Query: 64  FGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
           + K  M D A+   Q+M +       +  Y++L+    + + + +A S F   ++ G+ P
Sbjct: 63  YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP 122

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           +L  YN +I +  + K F +A+ L+  M  QG  PD  SY TL+N   +N    +AL +F
Sbjct: 123 NLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLF 182

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQ----LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            EM E     D+   NI+ID + +    L+ ++  +RL   ++   + P++ SYN ++  
Sbjct: 183 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL---LKGPSVYPNIPSYNVMING 239

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +   F E+  ++  M++ E  Q++ TY+T+I     S   + AT + +EM   G+ P+
Sbjct: 240 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 299

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI-------------------------- 332
            + Y+T++  + +AG+++    L++ +   G                             
Sbjct: 300 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 359

Query: 333 --------DPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGR 380
                   D + Y  ++    + G +  A  +L E        +T    + I  L R GR
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           ++E   V  Q    G   +  V   +I  F R  K  + +  F  M S G FP       
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           ++N   K   F  A  L  EM ++G   +   +  +++     K  +M  +L+ +     
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                ++H+++      + ++ DA ++ + M +R
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 200/450 (44%), Gaps = 38/450 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +YNV++  + +  +++ +  ++  M++     D YTYSTLI      G  D A   
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 77  LQQMEQDRVSGDLVLYSNLI---------------------ELARKLSDYS--------- 106
            ++M ++ VS D+V+Y+ ++                     E  R +  Y+         
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN 347

Query: 107 ----KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
               +AISI+  L       D + Y  +++   K     +A  ++EE        DT +Y
Sbjct: 348 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 407

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S+++N      +  E   V  +M +  C  +   CN +I+ + +    +DA R F +M  
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P+VV+YNTL+    +AE F EA  L + M +K  + N++TY+ ++    +  + + 
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDM 527

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A NL  +   +G +P+   ++ II     +GK++ A  L+ +++      + V + T++ 
Sbjct: 528 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLME 587

Query: 343 AYERVGLVAHAKRLL-HELR---QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            + +V     A ++  H L+   QP+ I     +  L    RI +A      A D G + 
Sbjct: 588 GFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRS 428
               +  +++ +   K Y   + V   M+ 
Sbjct: 648 TAITWNILVQGYLALKGYMEPVFVPASMKG 677



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 156/340 (45%), Gaps = 6/340 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   E     +V +YN+++R +    + + A  +++ + ++    D  TY  L+    K 
Sbjct: 323 WKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 382

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  + A+S L++ E  R   D   YS++I    +     +   +  ++   G  P+    
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN F +A   ++A      M  +G  P  V+Y+TL+N   +  +F EA ++  EM +
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502

Query: 188 VNCPLDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
                ++ T +++++   Q   LDMA +   L+    + G  P V  +N ++     +  
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALN---LWCQALEKGFKPDVKMHNIIIHGLCSSGK 559

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A+ L+  M+++    N+VT+NT+++ + K  + E+A+ +   +   G++P+ I+Y+ 
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNI 619

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            +       ++  A          GV    + +  ++  Y
Sbjct: 620 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 87/171 (50%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++  Y++++  + + K+ ++A  L+ +  ++G  PD   ++ +I      G  + A+
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 564

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M+Q     +LV ++ L+E   K+ D+ +A  I+  +   G+ PD+++YN  +   
Sbjct: 565 QLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGL 624

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                  +A   + +  ++GV P  ++++ L+  Y+    ++E + V A M
Sbjct: 625 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASM 675


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 251/528 (47%), Gaps = 10/528 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ S+ A N ++ +++R    ELA  ++ E+ + G+  + YT + ++    K+G  +   
Sbjct: 186 YTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVG 245

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           ++L ++++  V  D+V Y+ LI          +A  +   + S G  P +  YNT+IN  
Sbjct: 246 TFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGL 305

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   ++ A+ +  EM   G+ PD+ +Y +LL    +    VE  ++F++M   +   DL
Sbjct: 306 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDL 365

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              + M+ ++ +      A   F S+++ G+ P  V Y  L++ Y    +  EA++L   
Sbjct: 366 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNE 425

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M ++    +VVTYNT++    K     +A  L  EM  RG+ P++ T + +I    K G 
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L  A  LF+K++   +++D V Y T++  + +VG +  AK +  ++     +P   + +I
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L  A    G + EA  V+ +         + +   MI+ + R+   ++     EKM S G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNML 489
           + PD      ++  + K      A  L  +M+E +G +  D   +  + L+G  ++  M 
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSI-LHGFCRENQMK 664

Query: 490 ES---LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           E+   L + ++   N ++     ++ G   + N L +A R  + M +R
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDN-LTEAFRFHDEMLQR 711



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 221/468 (47%), Gaps = 11/468 (2%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L  + E+  Y P +  YN ++         E A  L   M  +G +P  YTY+T+I    
Sbjct: 248 LSEVQEKGVY-PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLC 306

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G ++ A     +M +  +S D   Y +L+  A K  D  +  +IFS ++S  +VPDLV
Sbjct: 307 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLV 366

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +++M+++F ++    +A +    ++E G+ PD V Y+ L+  Y       EA+++  EM
Sbjct: 367 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM 426

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL- 244
            +  C +D+ T N ++    +  M  +AD+LF  M + G+ P   SY   + + G  +L 
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD--SYTLTILIDGHCKLG 484

Query: 245 -FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A+ LF+ M+ K I+ +VVTYNT++  +GK  + + A  +  +M ++ I P  I++S
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHE 359
            ++      G L  A  ++ ++ S  ++   ++  +MI  Y R G  +      ++++ E
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFD--AGEVKDISVFGCMIELFSRNKKYA 417
              P+ I   T I    +   + +A  + ++  +   G V D+  +  ++  F R  +  
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               V  KM   G  PD      ++N +        A   + EM + G
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 8/285 (2%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN +L  + + K    A  LF+EM +RG+ PD YT + LI    K G   +A+   +
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M++ R+  D+V Y+ L++   K+ D   A  I++ + S  I+P  ++++ ++N      
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA  + +EM  + +KP  +  ++++  Y  +    +      +M       D  + N
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKM-----GIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            +I  YG +   ++  + F  ++KM     G+ P V +YN++L  +       EA  + R
Sbjct: 615 TLI--YGFVK-EENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR 671

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            M  + +  +  TY ++I  +       +A     EM  RG  P+
Sbjct: 672 KMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V   N +++   R+          ++M   G  PD  +Y+TLI  F KE     A   
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGL 632

Query: 77  LQQME--QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +++ME  Q  +  D+  Y++++    + +   +A ++  ++   G+ PD   Y ++IN F
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692

Query: 135 GKAKLFKEARLLIEEMREQGVKPD 158
                  EA    +EM ++G  PD
Sbjct: 693 VSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 8/249 (3%)

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E   +L+    N G   N   +  +I  + +A KL  A   F  LRS G  +       +
Sbjct: 139 EIVNSLVSTYSNCG--SNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNAL 196

Query: 341 IVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I +  R+G V  A R+  E+ +     N       +  L + G++E+      +  + G 
Sbjct: 197 IGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGV 256

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             DI  +  +I  +S         E+   M S G+ P  +    V+N   K  ++E A +
Sbjct: 257 YPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKE 316

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARK-DFNMLESLFERLDSDSNINKKELHHVVAGIY 515
           +++EM   G +  D   ++ L +   +K D    E++F  + S   +        +  ++
Sbjct: 317 VFAEMLRSG-LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 516 ERANRLNDA 524
            R+  L+ A
Sbjct: 376 TRSGNLDKA 384



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 2/111 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEM--RQRGIAPDRYTYSTLITCFGKEGMFDS 72
           + P   +YN ++   ++ +    A GL  +M  +Q G+ PD +TY++++  F +E     
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           A + L++M +  V+ D   Y++LI       + ++A      +   G  PD
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 232/498 (46%), Gaps = 39/498 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P  F+YNVV+  + R+ +   A  +FDEM   G+ P+  TY+T+I    K G  +
Sbjct: 187 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 246

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN--- 128
           +      QM  D    ++V Y+ L+    +     +   +   + S  + PD   Y+   
Sbjct: 247 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 306

Query: 129 ----------TMINVFGKA-----------------KLFKEARL-----LIEEMREQGVK 156
                     TM+++F ++                  L K+ ++     ++E +   G+ 
Sbjct: 307 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 366

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P TV Y+TL+N Y +      A  +F +M   +   D  T N +I+   +L+M   A+ L
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 426

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M K G+DPSV ++NTL+  YG A    +   +   MQ+K I+ +V+++ +++K + K
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 486

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           + +  +A  ++ +M  + + PNA  Y++II  + ++G  ++A +L +K+++SGV    V 
Sbjct: 487 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVT 546

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    R   +  A+ L++ LR    +P+ +   T I+     G  ++A  + ++  
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G    +  +  ++   +   +  ++  ++++M      P S I  +++++Y +     
Sbjct: 607 KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS 666

Query: 453 TADDLYSEMQEEGCVFSD 470
               L  EM E+G  F D
Sbjct: 667 KVASLKKEMSEKGIAFDD 684



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/486 (22%), Positives = 228/486 (46%), Gaps = 6/486 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAP-DRYTYSTLITCFGKEGMFDSAI 74
           P  FA+N V++  + A   ++A  +   M R  G  P D ++Y+ +I    + G    A+
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M    V  + + Y+ +I+   K  D      +  ++   G  P++V YN +++  
Sbjct: 215 KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGL 274

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A    E R+L++EM    + PD  +YS L +      +    LS+FAE  +    L  
Sbjct: 275 CRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGA 334

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            TC+I+++   +      A+++   +   G+ P+ V YNTL+  Y +      A  +F  
Sbjct: 335 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+ + I  + +TYN +I    K     KA +L+ EM+  G++P+  T++T+I  +G AG+
Sbjct: 395 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
           L++   +   ++  G++ D + + +++ A+ + G +  A  +L ++      PN     +
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I     +G  E+A  +  +  ++G    I  +  +++   R+ +     E+   +R+ G
Sbjct: 515 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD      ++++     + + A +L  EM + G   + + +  ++S   +    + +E
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634

Query: 491 SLFERL 496
            L++++
Sbjct: 635 CLYQQM 640



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 35/285 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E++   PSV  +N ++     A Q E    +  +M+Q+GI  D  ++ +++  F K G  
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++ L  M    V+ +  +Y+++I+   +  D  +A  +  ++K+SG+   +V YN +
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    ++    EA  LI  +R QG++PD VSY+T+++         +AL +  EMN    
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN---- 606

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                          K GI P++ +Y+TL+     A    +   
Sbjct: 607 -------------------------------KYGIRPTLRTYHTLVSALASAGRVHDMEC 635

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           L++ M  K +E +   Y  M+  Y +     K  +L +EM  +GI
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 2   SVAILD-WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +VAILD  I ++   +P+   YN ++   + +   E A  L ++M+  G++    TY+ L
Sbjct: 493 AVAILDDMIYKDV--APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    +    D A   +  +    +  D+V Y+ +I       D  KA+ +   +   GI
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P L  Y+T+++    A    +   L ++M  + V+P +  Y  +++ YV      +  S
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 181 VFAEMNEVNCPLDLT 195
           +  EM+E     D T
Sbjct: 671 LKKEMSEKGIAFDDT 685


>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
          Length = 701

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+    +  +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 155 KSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYS 214

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   FD A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 215 TLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARG 274

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 275 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 334

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM       +  T   +  +YG+    +DA +L+  MR+  +    +  NTLL 
Sbjct: 335 ARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTLLS 394

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L GEA  LF  M+  ++    + +  +Y  MI IYG S + ++A  L  EM   
Sbjct: 395 MCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMVES 454

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKAG++  A  + +   + G++ D
Sbjct: 455 GIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 494



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+   L++   G  P D + +N  +     A+ + +A  L  +M   GV  D ++
Sbjct: 153 WRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNIT 212

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 213 YSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRA 272

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 273 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 332

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM   G+EPNA T + +  I+G+A     A  L++++R   +  D +L  T+
Sbjct: 333 GLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCNTL 392

Query: 341 IVAYERVGLVAHAKRLLHELRQPN--TIPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLV  A++L  E++ P+   +P+         I I   +G  + A  +F +  
Sbjct: 393 LSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEMV 452

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           ++G   +I  +  +I+   +  +    ++V E   + G  PD  +   +L+
Sbjct: 453 ESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLS 503



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 4/196 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM   G+ P+  T + L   +G+     
Sbjct: 309 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGR 368

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+   +QM + ++  D +L + L+ +   +    +A  +FS +K   +     PD  +Y
Sbjct: 369 DALQLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSY 428

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G +     A  L  EM E G++P+ +SY+ ++    +  +  EA+ V      
Sbjct: 429 TAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 488

Query: 188 VNCPLDLTTCNIMIDV 203
                D   C  ++ V
Sbjct: 489 KGLKPDDRLCGCLLSV 504



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 5/218 (2%)

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R +       + + +N  +K    + +  +A  L  +M   G+  + ITYST+I    +
Sbjct: 163 LRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARR 222

Query: 312 AGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             + D+A   F+++ +S GV  D V Y  ++  Y ++G+      L    R     P   
Sbjct: 223 CRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHV 282

Query: 371 AITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           A  +LA+    AG  +   +VF++  + G   +I V+  ++E   +  K      +FE+M
Sbjct: 283 AFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM 342

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            + G  P++  +  +   YG+ R    A  L+ +M+E+
Sbjct: 343 TAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREK 380



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/380 (19%), Positives = 156/380 (41%), Gaps = 39/380 (10%)

Query: 156 KPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            P T     LLN L+    K +  L     + +   PLD    N+ +           A+
Sbjct: 136 PPSTSDALLLLNYLHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAE 195

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNTMIKI 273
           RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VTY+ ++ +
Sbjct: 196 RLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDV 255

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R  G++ +
Sbjct: 256 YAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPN 315

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +Y  ++ A  + G    A+ L  E+      P    +T LA+                
Sbjct: 316 IFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAK---------------- 359

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                          ++ R +   + ++++E+MR      D+ +   +L+    +     
Sbjct: 360 ---------------IYGRARWGRDALQLWEQMREKKLPADNILCNTLLSMCADVGLVGE 404

Query: 454 ADDLYSEMQEE--GCVFSDQ--VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           A+ L+SEM++   G V       +  M+++YG+  D +    LF  +  +S I    + +
Sbjct: 405 AEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM-VESGIEPNIMSY 463

Query: 510 -VVAGIYERANRLNDASRIM 528
            +V     +A R+ +A  ++
Sbjct: 464 TIVIQCLGKAGRIQEAVDVL 483



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 1/173 (0%)

Query: 364 NTIPRETAITILARAGRIEEAT-WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           + I   T IT   R  + ++A  W  R     G + D   +  +++++++      V+ +
Sbjct: 209 DNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLAL 268

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++ R +G+ PD    A++   +G+  +++    ++ EM+E G   +  V+  +L   G 
Sbjct: 269 FDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGK 328

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
                +  +LFE + ++           +A IY RA    DA ++  +M +++
Sbjct: 329 TGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 381


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 207/458 (45%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDS 72
           +  P+  AYN ++  ++   Q+E  H L++EM   G   PD  TYS LI+ F K G  DS
Sbjct: 189 KCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDS 248

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI  L +M+++ +     +Y+ +I L  KL +   A+S+F  ++     PD+  Y  +I 
Sbjct: 249 AIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIR 308

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    EA     EM+ +  KPDTV  + ++N   +  +  + L +F EM   +C  
Sbjct: 309 GLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHC-- 366

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHL 251
                                             P+VV+YNT+++   E++    E    
Sbjct: 367 ---------------------------------IPNVVTYNTIIKALFESKSRVSEVFSW 393

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A + D A  LFQ+L+ +       +Y  MI    + G +  A  L  E+ +    PN   
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               ++ LARA  ++EA    R+  + G + DI+ +  ++   ++       +E+   M+
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++   PD+     VL++      FE A +L  EM   G
Sbjct: 574 NSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 187/427 (43%), Gaps = 38/427 (8%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           ++R    D  TY  LI C      +      +Q+M +  +   +V    L ++ R L + 
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPIC--VVTPMELSQVIRMLGNA 172

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
               KAI+IF ++K+    P   AYN+MI +      +++   L  EM  +G   PDTV+
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVT 232

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM E           ++I ++ +LD    A  LF  MR
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            M   P V +Y  L+R  G+A    EA H +  MQR++ + + V  N MI   GK+   +
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLD 352

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
               L +EM      PN +TY+TII A++    ++      F++++ SG+   P  Y  +
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I  +                                +  RIE+A  +  +  + G     
Sbjct: 413 IDGF-------------------------------CKTNRIEKAMMLLEEMDEKGFPPCP 441

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  +I+   + K+Y    E+F++++       + + A+++   GK    + A +L+ E
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501

Query: 461 MQEEGCV 467
           M + GC 
Sbjct: 502 MSKLGCT 508



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 39/340 (11%)

Query: 11  EEARY---SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE RY    P VF Y  ++R + +A + + A+  + EM++    PD    + +I   GK 
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA 348

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D  +   ++M       ++V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFT 408

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++   +  ++  A  +F E+ 
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E           +MI   G+     DA  LF  M K+G  P+V +YN L+     A +  
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528

Query: 247 EAIHLFRLMQR-----------------------------------KEIEQNVVTYNTMI 271
           EA+   R MQ                                      I+ + V+YNT++
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                +   E+A  LM+EM   G E + ITYS+I+   GK
Sbjct: 589 SALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 181/392 (46%), Gaps = 11/392 (2%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT---CNIMIDVYGQL 207
           +++  + DT +Y  L++      ++ E   +  EM  V  P+ + T    + +I + G  
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEM--VRSPICVVTPMELSQVIRMLGNA 172

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVT 266
            M   A  +F+ ++     P+  +YN+++ +      + +   L+  M  +     + VT
Sbjct: 173 KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVT 232

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y+ +I  + K    + A  L+ EM+  G++P A  Y+ II+++ K   +  A  LF+++R
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
                 D   Y  +I    + G +  A    HE++    +P+T+     I  L +AGR++
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLD 352

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +   +F +   +  + ++  +  +I+ LF    + + V   FE+M+ +G  P     +++
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           ++ + K    E A  L  EM E+G       +  ++   G  K +++   LF+ L  +  
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            +   ++ V+     +A RL+DA  + + M+K
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK+++LA  LF E+++   +     Y+ +
Sbjct: 424 KAMMLLEEMDEKG-FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G  D AI+   +M +   + ++  Y+ L+    +     +A++   +++  G 
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD+ +YN ++N   K      A  ++  M+   +KPD VSY+T+L+       F EA  
Sbjct: 543 LPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAE 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN +    DL T + +++  G++D
Sbjct: 603 LMKEMNALGFEYDLITYSSILEAIGKVD 630


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 211/452 (46%), Gaps = 32/452 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN +L  +    +   A  L++ M + G +PD  TY+TL+  F K G  D A+  
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                +     D+V Y+ LI    K     +A  I  R+ S  +VPD+V YN+++N   K
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EAR+LI    ++G  P+ ++YSTL++ L  E     EAL +F  + +     ++ 
Sbjct: 128 NGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+ID   + D   +A  LF  + K G++P  ++Y   +    +A    +A+ + + M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    +VV++N +I    K    ++A  L+  M+ +G  PNAI+++T+I    +AGK 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A   F+++   GV+   V Y  ++               L + RQ             
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDG-------------LCKARQ------------- 338

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              GRI+EA  +F    + G V D+  +  +I+   +  K  +   +   M + G  P+ 
Sbjct: 339 --EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 396

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +    +++    L + + A +L+  M E+GCV
Sbjct: 397 YTYNSLISGLCGLEKVDEALELFVAMVEKGCV 428



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 200/441 (45%), Gaps = 46/441 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A YSP V  YN +L    +  + + A  +FD   +RG  PD  TY+ LI  F K    D
Sbjct: 38  KAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 97

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   LQ+M    VS +LV                               PD+V YN+++
Sbjct: 98  EAQRILQRM----VSENLV-------------------------------PDVVTYNSLV 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNC 190
           N   K     EAR+LI    ++G  P+ ++YSTL++ L  E     EAL +F  + +   
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T NI+ID   + D   +A  LF  + K G++P  ++Y   +    +A    +A+ 
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + + M  K    +VV++N +I    K    ++A  L+  M+ +G  PNAI+++T+I    
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV---GLVAHAKRLLHEL----RQP 363
           +AGK  +A   F+++   GV+   V Y  ++    +    G +  A  L   +    R P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + +     I  L +AG++++A  +       G + ++  +  +I      +K    +E+F
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419

Query: 424 EKMRSAGYFPDSHIIALVLNS 444
             M   G  PD+     ++++
Sbjct: 420 VAMVEKGCVPDTITYGTIISA 440


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 190/372 (51%), Gaps = 1/372 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ + D +     Y P+V +Y+++++ + R  +      L + M+  G  PD   Y+T+
Sbjct: 179 RAIELFDVMVARG-YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +    K+ + + A+    +M+   +   +V Y++LI   R L  + +A  + + +K   I
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI 297

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PDLVA++ +I++  K     EAR++++ M E GV+PD  +Y+TL+N Y    + VEA  
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARK 357

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           VF  M       D+ + +I+++ Y +     +A +LF  M   G+ P  VSYNTL+    
Sbjct: 358 VFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLC 417

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EA  LF+ M       N+VTY+ ++    K    ++A  L + M+N G++P+ +
Sbjct: 418 QARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLV 477

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ +I    K GK   A  LF +L   G++ +  +    I    + GL+  A +   ++
Sbjct: 478 TYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537

Query: 361 RQPNTIPRETAI 372
            + +  P +  I
Sbjct: 538 EKDDCSPAQGCI 549



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 189/378 (50%), Gaps = 4/378 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  ++ ++       +   A  LFD M  RG  P+ ++YS +I    + G     I  
Sbjct: 159 PNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKL 218

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M+      D+V+Y+ +++   K    ++A+ IF ++K +GI+P +V Y ++I+    
Sbjct: 219 LEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KEA  L+ EM+   + PD V++S L+++  +  +  EA  +   M E+    D+ T
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVAT 338

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++ Y       +A ++F  M   G  P V S++ L+  Y +A+   EA  LF  M 
Sbjct: 339 YNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMT 398

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  + V+YNT+I    ++    +A  L ++M + G  PN +TYS ++    K G LD
Sbjct: 399 HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD 458

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  LF+ + +SG++ D V Y  MI    + G    A+ L  EL     QPN       I
Sbjct: 459 QAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTI 518

Query: 373 TILARAGRIEEATWVFRQ 390
             + + G ++EA   FRQ
Sbjct: 519 DGVCKGGLLDEAHKAFRQ 536



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 212/454 (46%), Gaps = 4/454 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  +  +   ++R K ++    L  +M   GI+ D  + + LI CF +    D   S 
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +  +  +++ +S LI          +AI +F  + + G  P++ +Y+ +I    +
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                E   L+E M+  G +PD V Y+T+++   ++    EA+ +F +M        + T
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I     L   K+A  L   M+   I P +V+++ L+ +  +     EA  + + M 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +E +V TYNT++  Y   +E  +A  + + M ++G  P+  ++S ++  + KA ++D
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  LF ++   G+  D V Y T+I    +      A+ L  ++      PN +     +
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L++ G +++A  +FR   ++G   D+  +  MI+   +  K+ +  E+F ++   G  
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           P++ +    ++   K    + A   + +M+++ C
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDC 542



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 197/428 (46%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    +  L +   +   + + +S  +QME   +S D++  + LI    +
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L       S+  ++   G+ P+++ ++T+IN F        A  L + M  +G KP+  S
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS ++       K  E + +   M  V C  D+   N ++D   +  +  +A  +F  M+
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P+VV+Y +L+        + EA  L   M+   I  ++V ++ +I I  K  E  
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +++ M   G+EP+  TY+T++  +    ++  A  +F+ + S G   D   +  ++
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y +   +  AK+L  E+      P+T+   T I+ L +A R  EA  +F+     G  
Sbjct: 379 NGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYP 438

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++  +  +++  S+       + +F  M ++G  PD     ++++   K  +F+ A +L
Sbjct: 439 PNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAREL 498

Query: 458 YSEMQEEG 465
           ++E+  +G
Sbjct: 499 FAELSVKG 506



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 197/423 (46%), Gaps = 9/423 (2%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+S    M        +V +  L     ++  Y   +S+  +++ +GI  D+++   +
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F +         ++ ++ + G++P+ +++STL+N +    K   A+ +F  M     
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ + +I+I    ++    +  +L   M+ +G +P VV YNT++    +  L  EA+H
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M+   I   VVTY ++I         ++A  L+ EM+   I P+ + +S +I I  
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G++  A ++ + +   GVE D   Y T++  Y     V  A+++   +     +P   
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           + +IL     +A RI+EA  +F +    G + D   +  +I    + ++     E+F+ M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM----LSLYGA 482
            S GY P+    +++L+   K    + A  L+  M+  G +  D V + +    +  YG 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG-LKPDLVTYNIMIDGMCKYGK 491

Query: 483 RKD 485
            KD
Sbjct: 492 FKD 494



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 185/407 (45%), Gaps = 43/407 (10%)

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           R   + + A+S F+ + ++  +P +V +  + +   + K +K    L ++M   G+  D 
Sbjct: 67  RTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDV 126

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           +S + L+N +                    C +D          YG   + K        
Sbjct: 127 LSLTILINCFCRL-----------------CHVD----------YGFSVLGK-------- 151

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           + K+G++P+V++++TL+  +      G AI LF +M  +  + NV +Y+ +IK   +  +
Sbjct: 152 IIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +   L++ M+  G EP+ + Y+TI+    K   ++ A  +F K++ +G+    V Y +
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAG 395
           +I     +G    A  LL+E++  N +P   A    I I+ + G + EA  + +   + G
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D++ +  ++  +    +     +VFE M S G  PD    ++++N Y K +  + A 
Sbjct: 332 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAK 391

Query: 456 DLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERLDSDS 500
            L+ EM   G +  D V +  L   L  AR+     E LF+ + S+ 
Sbjct: 392 QLFDEMTHRG-LIPDTVSYNTLISGLCQARRPLEA-EELFKDMHSNG 436


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 212/420 (50%), Gaps = 14/420 (3%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ +N+V+       Q  LA  +  +M + G  PDR T  +L+  F +      A+S + 
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +     D+V Y+ +I+   K    + A   F  ++  GI P++V Y  ++N    + 
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + +A  L+ +M ++ + P+ ++YS LL+ +V+N K +EA  +F EM  ++   D+ T +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +++     D   +A+++F  M   G    VVSYNTL+  + +A+   + + LFR M ++
Sbjct: 300 SLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYNT+I+ + ++ + +KA     +M   GI P+  TY+ ++      G+L++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
            ++F+ ++   +++D V Y T+I    + G V  A  L   L     +P+ +   T ++ 
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479

Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           L   G + E   ++ +    G +K D ++    I L +         E+ +KM S GY P
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA---------ELIKKMLSCGYAP 530



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 175/359 (48%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P       ++    R  +   A  L D+M + G  PD   Y+ +I    K    + A 
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + +++E+  +  ++V Y+ L+      S +S A  + S +    I P+++ Y+ +++ F
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA+ L EEM    + PD V+YS+L+N    + +  EA  +F  M    C  D+
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +I+ + +    +D  +LF  M + G+  + V+YNTL++ + +A    +A   F  
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M    I  ++ TYN ++     + E EKA  + ++MQ R ++ + +TY+T+I    K GK
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++ A  LF  L   G++ D V Y TM+      GL+   + L  +++Q   +  +  ++
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 162/319 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P + AYN ++ ++ + K+   A   F E+ ++GI P+  TY+ L+        + 
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L  M + +++ +++ YS L++   K     +A  +F  +    I PD+V Y++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA  + + M  +G   D VSY+TL+N + +  +  + + +F EM++    
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + Q      A   F  M   GI P + +YN LL    +     +A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  MQ++E++ ++VTY T+I+   K+ + E+A +L   +  +G++P+ +TY+T+++    
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 312 AGKLDRAAMLFQKLRSSGV 330
            G L     L+ K++  G+
Sbjct: 483 KGLLHEVEALYTKMKQEGL 501



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 196/431 (45%), Gaps = 4/431 (0%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + AI     M + R    +V ++ L+    KL  Y   IS+  +++  GI  DL  +N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN F        A  ++ +M + G +PD V+  +L+N +   ++  +A+S+  +M E+ 
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   N +ID   +     DA   F  + + GI P+VV+Y  L+     +  + +A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M +K+I  NV+TY+ ++  + K+ +  +A  L +EM    I+P+ +TYS+++   
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
               ++D A  +F  + S G   D V Y T+I  + +   V    +L  E+ Q     NT
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I    +AG +++A   F Q    G   DI  +  ++     N +    + +FE 
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+      D      V+    K  + E A  L+  +  +G       +  M+S    +  
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 486 FNMLESLFERL 496
            + +E+L+ ++
Sbjct: 486 LHEVEALYTKM 496



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 201/453 (44%), Gaps = 15/453 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           LR  +   A  LF +M +    P    ++ L++   K   +D  IS  ++ME   +  DL
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             ++ +I         S A+SI  ++   G  PD V   +++N F +     +A  L+++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E G KPD V+Y+ +++   +  +  +A   F E+       ++ T   +++       
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA RL   M K  I P+V++Y+ LL  + +     EA  LF  M R  I+ ++VTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++         ++A  +   M ++G   + ++Y+T+I  + KA +++    LF+++   G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           +  + V Y T+I  + + G V  A+    ++      P+       +  L   G +E+A 
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV---L 442
            +F          DI  +  +I    +  K      +F  +   G  PD      +   L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 443 NSYGKLREFETADDLYSEMQEEG-----CVFSD 470
            + G L E E    LY++M++EG     C  SD
Sbjct: 481 CTKGLLHEVEA---LYTKMKQEGLMKNDCTLSD 510


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 212/472 (44%), Gaps = 45/472 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V  YN ++ ++ +A   E A  L   M  RG  P+  TYS LI    K G  D A 
Sbjct: 112 HHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 171

Query: 75  SWLQQMEQD---------------------------------------RVSGDLVLYSNL 95
             +Q+M +                                        RVS D V +S L
Sbjct: 172 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 231

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I+   K     +A +    + + G VP++V YN ++N   KA   + A  +IE M ++GV
Sbjct: 232 IDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGV 289

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            PD ++YS L++ + +  +  EAL +   M    C  ++ T N +ID   + D + +A +
Sbjct: 290 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQ 349

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           +   +    + P  V++N L+    +A  F +A  LF  M  K ++ +V+T+  +I    
Sbjct: 350 IALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLC 409

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+ + E A +++  M N G+ PN +TY+ ++    K+G+++      +++ SSG   + +
Sbjct: 410 KAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESM 469

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
            Y +++ A  R      A +L+ +L+     P+T+     +  L ++G+ E+A  V  + 
Sbjct: 470 TYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 529

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              G   D   F        R+   A  +E+   + + G  PD+   + +L+
Sbjct: 530 VGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 225/458 (49%), Gaps = 10/458 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  YN ++  + ++ +      LF+E+ +RG  PD  TY+TLI    K G  + A  
Sbjct: 78  APTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARR 137

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL--KSSGIVPDLVAYNTMINV 133
               M       ++V YS LI    K+    +A  +   +  KS  ++P+++ YN+ ++ 
Sbjct: 138 LHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 197

Query: 134 FGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             K  +  EA  L+  +R+    V PDTV++STL++   +  +  EA +   +M      
Sbjct: 198 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYV 255

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N +++   + D  + A  +  SM   G+ P V++Y+ L+  + +A    EA+ L
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  +    NVVT+N++I    KS    +A  +  ++ NR + P+ +T++ +IA   K
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           AG  ++A+ LF+++ +  ++ D + +  +I    + G V  A+ +L  +      PN + 
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +  L ++GRIEE      +   +G V +   +G ++    R  +  + +++  K++
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           S G+ PD+    ++++   K  + E A  +  EM  +G
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 533



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 203/461 (44%), Gaps = 46/461 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLF-DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           S SV  YN+VL+++ RA +   A  +F  EM + G+AP                      
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPT--------------------- 80

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                         +V Y+ +I    K ++    + +F  L   G  PD+V YNT+I+  
Sbjct: 81  --------------IVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSL 126

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL-- 192
            KA   +EAR L   M  +G  P+ V+YS L+N   +  +  EA  +  EM   +C +  
Sbjct: 127 CKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 186

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMR--KMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           ++ T N  +D   +  M  +A  L  S+R   + + P  V+++TL+    +     EA +
Sbjct: 187 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 246

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M       NVVTYN ++    K+ + E+A  +++ M ++G+ P+ ITYS ++  + 
Sbjct: 247 --DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 304

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KA ++D A  L   + S G   + V + ++I    +      A ++  ++     +P + 
Sbjct: 305 KASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKV 364

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              IL     +AG  E+A+ +F +        D+  FG +I+   +  +     ++ + M
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            + G  P+     ++++   K    E   +   EM   GCV
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 207/459 (45%), Gaps = 4/459 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV++    RA   + A  L D M  RG+ P   TY++++    K   FD A   
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M+Q  V+ D+  ++ LI    ++ +  +A+  +  ++   + PD+V+++ +I +F +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EM+  G+ PD V Y+ ++  +       EAL V  EM    C  D+ T
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +     DA++L   M + G+ P + ++ TL+  Y     F  A+ LF  + 
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R+ +  +VVTYN++I    +  +  KA  L  +M  R I PN ITYS +I    + G+++
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A     ++   G   +   Y ++I  Y R G V   ++ L ++RQ N  P       L 
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549

Query: 377 RAGRIEEATWVFRQAFDAGEVK----DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                EE        F+  E +    D   +  +I  FS      +   VF+ M  +G  
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIE 609

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           PD +    ++N +      + A  L+ EM   G    D+
Sbjct: 610 PDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 233/516 (45%), Gaps = 16/516 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A N +L  + RA    LA   +  +       + YT + ++  + K   FD A + + +M
Sbjct: 124 ASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEM 183

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+  V  D+V ++ LI+   +  D   AI++   + + G+ P +V YN+++    K + F
Sbjct: 184 EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRF 243

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A+ +   M +  V PD  S++ L+  +    +  EA+  + EM       D+ + + +
Sbjct: 244 DKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL 303

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I ++ +      A      M+ +G+ P  V Y  ++  +  A    EA+ +   M     
Sbjct: 304 IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VVTYNT++    K      A  L+ EM+ RG+ P+  T++T+I  + + G  + A  
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
           LF  L    +  D V Y ++I    R G +A A  L  ++     +P     +IL     
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHC 483

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             G++E+A     +    G + +I  +  +I+ + R+       +  +KMR    FPD  
Sbjct: 484 EKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLI 543

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFE 494
               +++ Y K      A ++++ M++E  V  D V + M+ + G  +  NM ++  +F+
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKE-MVRPDAVTYNMI-INGFSEQGNMQDAGRVFK 601

Query: 495 RLDSDSNINKKEL-------HHVVAGIYERANRLND 523
            +  DS I             HV AG  ++A +L+D
Sbjct: 602 GM-GDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHD 636



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 195/428 (45%), Gaps = 39/428 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++   +P V ++N+++    R  + + A   + EM+ R + PD  ++S LI  F + G  
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A ++L++M+   +  D V+Y+ +I    +    S+A+ +   +   G +PD+V YNT+
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     +A  L+ EM E+GV PD  +++TL++ Y     F  AL           
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL----------- 422

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                   +LF ++ +  + P VV+YN+L+          +A  
Sbjct: 423 ------------------------QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+  M  +EI  N +TY+ +I  + +  + E A   + EM  +G  PN  TY++II  + 
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNTI 366
           ++G + +     QK+R   V  D + + T+I  Y +   +  A  + +    E+ +P+ +
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAV 578

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I   +  G +++A  VF+   D+G   D   +  +I             ++ ++M
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638

Query: 427 RSAGYFPD 434
              G+ PD
Sbjct: 639 IHRGFAPD 646



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 19/344 (5%)

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           R ++  +      P    +  L+  Y ++ K  EA   F  + +   P+  +  N ++ V
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 204 Y---GQLDMAKDADRLFWSMRKMGIDPSVVSY--NTLLRVYGEAELFGEAIHLFRLMQRK 258
               G   +A++A RL  S      D  V +Y  N ++  Y +   F  A  +   M+++
Sbjct: 132 LSRAGWPHLAQEAYRLVLSS-----DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKR 186

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +VVT+N +I    ++ + + A  L+  M NRG++P  +TY++++    K  + D+A
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITI 374
             +F+ +    V  D   +  +I  + RVG V  A    K + H    P+ +     I +
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            +R G ++ A    R+    G V D  ++  +I  F R    +  + V ++M   G  PD
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG-----CVFSDQVH 473
                 +LN   K      A+ L +EM+E G     C F+  +H
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIH 410


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 179/360 (49%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN ++    R    E A  + + M  +G+ P  +TY+ +I    K+G +  A   L +M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +S D   Y+ L+  + +  ++S+A  IF  +   G+VPDLV++++++ VF + +  
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A +   +M++ G+ PD V Y+ L++ Y  N   +EAL +  EM E  C LD+   N +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ++   +  M  DAD+LF  M + G  P   ++ TL+  + +     +A+ LF  M ++ I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + ++V YNT+I  + K  E EKA+ L   M +R I PN ITY  +I  +   G +  A  
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L+  +   G++   V   T+I  Y R G  + A   L  +      P   +   L   G+
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGK 362



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 155/291 (53%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP    YN +L    R   +  A  +F EM ++G+ PD  ++S+L+  F +    D A+ 
Sbjct: 68  SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALV 127

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + M++  +  D V+Y+ L+    +  +  +A+ I   +   G V D++AYNT++N   
Sbjct: 128 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 187

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  +A  L +EM E+G  PD  +++TL++ + ++    +ALS+F  M + N   D+ 
Sbjct: 188 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 247

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +ID + ++   + A  L+  M    I P+ ++Y  L+  Y       EA  L+ +M
Sbjct: 248 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 307

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
             K I+  +VT NT+IK Y +S +  KA   +  M  +G+ P+ I+Y+T+I
Sbjct: 308 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 160/325 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+F YN ++  + +  ++  A G+  EM   G++PD  TY+TL+    +   F  A   
Sbjct: 34  PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 93

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  V  DLV +S+L+ +  +     +A+  F  +K  G+VPD V Y  +++ + +
Sbjct: 94  FGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 153

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  + +EM EQG   D ++Y+T+LN   +     +A  +F EM E     D  T
Sbjct: 154 NGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 213

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + Q      A  LF +M +  I P +V+YNTL+  + +     +A  L+  M 
Sbjct: 214 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 273

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            ++I  N +TY  +I  Y       +A  L   M  +GI+P  +T +T+I  + ++G   
Sbjct: 274 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 333

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A     ++ + GV  D + Y T+I
Sbjct: 334 KADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 5/365 (1%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ LI    +     +A  I + +   G+ P L  YN +IN   K   +  A+ ++ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM   G+ PDT +Y+TLL        F EA  +F EM       DL + + ++ V+ +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
               A   F  M+K G+ P  V Y  L+  Y       EA+ +   M  +    +V+ YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++    K      A  L  EM  RG  P+  T++T+I    + G + +A  LF  +   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEA 384
            ++ D V Y T+I  + +VG +  A  L   +      P      IL  A    G + EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             ++    + G    +     +I+ + R+   +   E   +M + G  PD HI    L +
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD-HISYNTLIN 359

Query: 445 YGKLR 449
            GK R
Sbjct: 360 DGKRR 364



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 31/342 (9%)

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V YNT+I  + +  L +EA  ++  M ++G+KP   +Y+ ++N   +  ++  A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM  +    D TT N ++    + D   +A  +F  M + G+ P +VS+++L+ V+    
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A+  FR M++  +  + V Y  ++  Y ++    +A  +  EM  +G   + I Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           TI+    K   L  A  LF ++   G   D   + T+I  + + G +  A  L   + Q 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N  P                               DI  +  +I+ F +  +     E++
Sbjct: 241 NIKP-------------------------------DIVAYNTLIDGFCKVGEMEKASELW 269

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + M S   FP+     +++N+Y  +     A  L+  M E+G
Sbjct: 270 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           +VTYNT+I  Y +    E+A  +M  M ++G++P+  TY+ II    K G+  RA  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQ---PNTIPRETAITILARAG 379
           ++ + G+  D   Y T++V   R    + AK +  E LRQ   P+ +   + + + +R  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
            +++A   FR     G V D  ++  ++  + RN      +++ ++M   G   D     
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            +LN   K +    AD L+ EM E G    D   F  L ++G  +D NM ++L
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERG-ALPDFYTFTTL-IHGHCQDGNMTKAL 231



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 35/184 (19%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V AYN +L  + + K    A  LFDEM +RG  PD YT++TLI    ++G    A+S   
Sbjct: 176 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 235

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M Q  +  D+V Y+ LI+   K+ +  KA  ++  + S  I P+ + Y  +IN +    
Sbjct: 236 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 295

Query: 139 LFKEARLLIEEMREQGVKP-----------------------------------DTVSYS 163
              EA  L + M E+G+KP                                   D +SY+
Sbjct: 296 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 355

Query: 164 TLLN 167
           TL+N
Sbjct: 356 TLIN 359


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 205/459 (44%), Gaps = 8/459 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L  + R  +   A   FD M  RG +PD   Y+ L+    KEG    A 
Sbjct: 111 YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAW 170

Query: 75  SWLQQMEQ-DR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
              + M+  DR V+ DL+ Y+ LI+   ++    +A+ +F  + + G +PD V YN+++ 
Sbjct: 171 GLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILL 230

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     EA  + ++M + G  P+  +YS +L+ +         L ++ EM E     
Sbjct: 231 GLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSP 290

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+  CN +ID+  +     DA ++   M K+G  P VV+YN LL    +  L  +A  LF
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 350

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       ++V+Y+ ++    K+ +   A  L   M  R + P+ +T++ ++    KA
Sbjct: 351 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PR 368
           GKLD A  L   +    V  D V   T++    R      A RL   + +  T+    P 
Sbjct: 411 GKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPH 470

Query: 369 ETAITILARAGRIEEATWVFRQAFDA-GEVK-DISVFGCMIELFSRNKKYANVIEVFEKM 426
              +  L R G++ +A   F+    + GE   D+  +  ++       +    ++ F++M
Sbjct: 471 NIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQM 530

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             +G  PD      ++N   K      AD L   M+E+G
Sbjct: 531 TGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 206/440 (46%), Gaps = 44/440 (10%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M ++G  PD  TYST+I+   K G    A+  +++M +  V+ D+  Y+ +++   +   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +A  +F ++   G   + VAYN +IN   K +  + A  L+EEM  +G +PD ++Y+T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +             LS    M +V+                      +A + F SM   G
Sbjct: 121 I-------------LSGLCRMGKVS----------------------EAKQFFDSMPSRG 145

Query: 225 IDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQ--RKEIEQNVVTYNTMIKIYGKSLEHE 281
             P VV+YN LL  +Y E ++  EA  LF+ M    +++  +++TYNT+I  + +  + +
Sbjct: 146 YSPDVVAYNGLLDALYKEGKV-AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L +++  +G  P+ +TY++I+    +   +D A  +F+K+  SG   +   Y  ++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             + RVG +A    L  E+ +    P+ +     I +L +A ++++A  V  +    G V
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +++   +        E+F  M   G  PD    ++VLN   K  +   A  L
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384

Query: 458 YSEMQEEGCVFSDQVHFQML 477
           +  M E   V  D V F +L
Sbjct: 385 FDRMIERKLV-PDVVTFNIL 403



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 202/462 (43%), Gaps = 6/462 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V  Y+ ++  + +  +   A  + +EM ++G+ PD  TY+ ++    + G  D
Sbjct: 3   EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A     +M +   S + V Y+ LI    K  +  +A  +   + S G  PD + YNT++
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-- 189
           +   +     EA+   + M  +G  PD V+Y+ LL+   +  K  EA  +F  M+  +  
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              DL T N +ID + +++   +A +LF  +   G  P  V+YN++L          EA 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F+ M       N  TY+ ++  + +     +   L +EM  +   P+ +  + +I + 
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            KA K+D A  + +++   G   D V Y  ++    +  LV  A  L   +      P+ 
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     +  L +  ++ +A  +F +  +   V D+  F  +++   +  K     ++ + 
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           M      PD      +++   + +  + A  L+  M E+G V
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 191/404 (47%), Gaps = 18/404 (4%)

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M E+G +PD V+YST+++   +  K  EAL +  EM E     D+ T  I++D   +   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +AD LF  M + G   + V+YN L+    + E    A  L   M  K  E + +TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++    +  +  +A      M +RG  P+ + Y+ ++    K GK+  A  LF+ +  + 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 330 VEIDP--VLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEE 383
            ++ P  + Y T+I  + RV     A +L  ++      P+T+   + +  LAR   ++E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +F++  D+G   + + +  ++    R    A  +E++E+M    + PD  +   V++
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES---LFERLDSDS 500
              K ++ + A  +  EM + G V  D V + +L L G  K  N+++    LF  +  + 
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAV-PDVVTYNIL-LDGLCKT-NLVDKAHELFSTMVDNG 357

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNKRR------TFN 538
                  + VV     + N+++DA  + +RM +R+      TFN
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/422 (20%), Positives = 188/422 (44%), Gaps = 29/422 (6%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + +P +  YN ++    R ++ + A  LF ++  +G  PD  TY++++    ++   D A
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M     + +   YS ++    ++ + ++ + ++  +      PD++  N +I++
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KAK   +A  ++EEM + G  PD V+Y+ LL+   + +   +A  +F+ M +  C  D
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + +++++   + +   DA  LF  M +  + P VV++N L+    +A    EA  L  
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M    +  + VT  T++    +    ++A  L Q M  +G   + + ++ ++A   + G
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           KL +A + F+ +  S  E                               P+ +   T + 
Sbjct: 482 KLAQALLFFKSMVKSDGEF-----------------------------SPDVVTYTTLVN 512

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L  AGR+++A   F+Q   +G   D   +  ++    +  ++     + + M+  G+  
Sbjct: 513 ALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS 572

Query: 434 DS 435
           D 
Sbjct: 573 DC 574



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 35/74 (47%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           +  +  +SP V  Y  ++  ++ A + + A   F +M   G APD   Y+TL+    K+G
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553

Query: 69  MFDSAISWLQQMEQ 82
               A    Q M++
Sbjct: 554 RHIQADRLTQAMKE 567


>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
 gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
          Length = 597

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 209/441 (47%), Gaps = 9/441 (2%)

Query: 33  KQWELAHGLFD-EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
           +QWE    + +  +R+    PD   Y+ LI  +G++     A +    + + R       
Sbjct: 150 RQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDT 209

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ L+          +A  + S ++ +GI P    YN  ++   KA+  ++A  + + M+
Sbjct: 210 YALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMK 269

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++  + +T +Y+ ++N+Y + ++ + +L VF EM  V C  ++ T   +++ + +  + +
Sbjct: 270 KERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCE 329

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A+ +F  M++ G +P V +YN L+  Y  A L   A  +F LM+    E +  +YN ++
Sbjct: 330 KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILV 389

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             +G++  H++A    QE++ +G+ P   ++  +++   ++G + R   +  +L  SG+ 
Sbjct: 390 DAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLR 449

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--------PNTIPRETAITILARAGRIEE 383
            D      M+ AY R G +   +RL   + +        P+T      +    RAG ++ 
Sbjct: 450 PDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDR 509

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
               FR     G   D+  +   I  ++R K+Y   + VFE+M  AG +PD+    ++L 
Sbjct: 510 MEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLA 569

Query: 444 SYGKLREFETADDLYSEMQEE 464
           +    R+ E    +   M ++
Sbjct: 570 ACSDERQVEQVKAIVRSMHKD 590



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 168/390 (43%), Gaps = 8/390 (2%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           L+ S   PD++ YN +I+ +G+ +   EA      + E    P   +Y+ LL  Y  + +
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              A  V +EM     P   T  N  +D   +   ++ A  ++  M+K     +  +Y  
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTL 282

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++ VYG+A     ++ +FR M+    + N+ TY  ++  + +    EKA  + +EMQ  G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
            EP+   Y+ ++  + +AG    A+ +F  +   G E D   Y  ++ A+ R GL   A+
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
               EL+Q    P   +  +L    AR+G +     V  Q   +G   D      M+  +
Sbjct: 403 AAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAY 462

Query: 411 SRNKKYANVIEVFEKM-RSAGYF---PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            R  +  ++  +F  M R  G     PD+    +++N+YG+    +  +  +  +   G 
Sbjct: 463 GRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGL 522

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERL 496
                     +  Y  +K++     +FE +
Sbjct: 523 AADVVTWTSRIGAYARKKEYGQCLRVFEEM 552



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 160/368 (43%), Gaps = 10/368 (2%)

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSV 229
           +  +A SV+  ++++    DL   + +++V  QL + +  + +     W +R+    P +
Sbjct: 115 RGTDAASVWESLDKIPQAHDLW--DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDI 172

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           + YN L+  YG+     EA   +  +          TY  +++ Y  S +  +A  ++ E
Sbjct: 173 ICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE 232

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           MQ  GI P A  Y+  +    KA   ++A  ++Q+++      +   Y  MI  Y +   
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQ 292

Query: 350 VAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              + R+  E++    +PN       +   AR G  E+A  VF +   AG   D+  +  
Sbjct: 293 PMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNA 352

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++E +SR        E+F  M   G  PD     ++++++G+    + A+  + E++++G
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQG 412

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              + + H  +LS +    +    E +  +L            + +   Y RA RL+D  
Sbjct: 413 MRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDME 472

Query: 526 RIMNRMNK 533
           R+   M +
Sbjct: 473 RLFAAMER 480



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 39/230 (16%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A + P V+AYN ++    RA   + A  +F  M   G  PDR +Y+ L+  FG+ G+ 
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA---- 126
             A +  Q+++Q  +   +  +  L+    +  + ++   + ++L  SG+ PD  A    
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 127 -----------------------------------YNTMINVFGKAKLFKEARLLIEEMR 151
                                              YN M+N +G+A            + 
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLA 518

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            +G+  D V++++ +  Y    ++ + L VF EM +  C  D  T  +++
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 217/456 (47%), Gaps = 43/456 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF +N+V+  + +  +   A  LF  M+  G +PD  TY++LI  +GK G  +    
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            + +M +   + D+V Y+ LI    K     KA S F  +K  G++ ++V  +T ++ F 
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L  +MR +G+ P+  +Y++L++                            
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVD---------------------------G 348

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TC       G+LD   DA  L   M   G+ P+VV+Y  ++    +      A  +  LM
Sbjct: 349 TCKA-----GRLD---DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLM 400

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG--KAG 313
           +R  ++ N + Y T+I  +  +   E+A +L+ EM+N+G+E +   Y T+  IWG  K  
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL--IWGLCKVQ 458

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           KLD A  L  K+   G+  + V+Y T++ A+ + G  + A  LLH++     QPN +   
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYC 518

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I  L +AG I EA   F +  + G   ++ V+  +I+ F +    +  + +  +M   
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D  +   +++ + K  + + A  L ++M E G
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 20/398 (5%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+  + E    P+  +++ +++   +  + VEA ++F  M  + C  D+ T N +ID YG
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +    ++ + L   MRK G    VV+YN L+  + +     +A   F  M+R  +  NVV
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T +T +  + K     +A  L  +M+ RG+ PN  TY++++    KAG+LD A +L  ++
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI---- 381
              G+  + V Y  M+    + G VA A  +L  + +      E   T L     +    
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E A  +  +  + G   D+S++G +I    + +K      +  KM   G  P++ I   +
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485

Query: 442 LNSYGKLREFETADDLYSEMQEEG--------CVFSDQVHFQMLSLYGARKDFNMLESLF 493
           ++++ K  +   A  L  ++ + G        C   D +  +  S+Y A   F+ +    
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL-CKAGSIYEAISHFDKM---- 540

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             L  D N+   +++  +   + +   L+ A  +MN M
Sbjct: 541 RELGLDPNV---QVYTTLIDGFCKIGSLSKAVHLMNEM 575



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 20/359 (5%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           + SRL  +G  P L A  +++++  +A L             +   P    + TLL+L  
Sbjct: 97  LLSRLLGAGHRPHLAA--SLVDILHRAALALGP--------HRSALPSV--FDTLLSLLA 144

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
           ++    +A+   A + ++  P +  TCN ++    +        RLF  +      P+V 
Sbjct: 145 DHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVF 200

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           ++N ++    +     EA  LF  M+      +VVTYN++I  YGK  E E+   L+ EM
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           +  G   + +TY+ +I  + K G +++A   F +++  GV  + V   T + A+ + GLV
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320

Query: 351 AHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A +L  ++R    +P E   T L     +AGR+++A  +  +    G V ++  +  M
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 380

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++   +  K A   +V   M  AG   +  +   +++ +   +  E A DL +EM+ +G
Sbjct: 381 VDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 129/282 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A    +   Y  ++      K  E A  L +EM+ +G+  D   Y TLI    K    
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S L +M+   +  + V+Y+ +++   K    S+A+++  ++  SG+ P++V Y  +
Sbjct: 461 DEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCAL 520

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA    EA    ++MRE G+ P+   Y+TL++ + +     +A+ +  EM +   
Sbjct: 521 IDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGM 580

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD      +ID + +    + A  L   M + G+   +  Y   +  +    +  EA  
Sbjct: 581 SLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARG 640

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +   M    I  +   YN +I+ Y K    E+A++L  EM++
Sbjct: 641 VLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 6/197 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+L  I +     P+V  Y  ++  + +A     A   FD+MR+ G+ P+   Y+TLI
Sbjct: 498 AVALLHKIPDSG-LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F K G    A+  + +M    +S D V+Y++LI+   K  D   A ++ +++  +G+ 
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            DL  Y   I+ F    + +EAR ++ EM   G+ PD  +Y+ L+  Y +     EA S+
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676

Query: 182 FAEMNEVNCPLDLTTCN 198
             EM  V     L++C 
Sbjct: 677 QNEMESV-----LSSCT 688


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 218/498 (43%), Gaps = 78/498 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  ++    R+ +WE A  LF+EM   GI  D  T S LI    KEG    A   
Sbjct: 154 PDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANEL 213

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM------ 130
           L+ M Q     D+V YS LI+        S+A  +F  ++  G  PD +AY T+      
Sbjct: 214 LEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQ 273

Query: 131 -----------------------------------INVFGKAKLFKEARLLIEEMREQGV 155
                                              I+   K +   EAR L +EM+ QG+
Sbjct: 274 TGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 333

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            PD +SY+TL++ +  + K+ +A  +F EM +V    D+TT +++ID+  +     +A++
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   + + G  P VV+  TL++         +A  LF  MQ+     NVVT  T++K   
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453

Query: 276 KS----LEHEKATNLMQEMQNRGI--EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +S    +  E   N++ +    GI  +PNAI+YS II    K G+ D A  LF+++++ G
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 513

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
           V  D + Y ++I  +                                R+G+ ++A ++F 
Sbjct: 514 VIPDVISYTSLIHGF-------------------------------CRSGKWKDAKYLFN 542

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  D G   D++ F  +I++  +  K     E+ E M   G  P++     ++       
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602

Query: 450 EFETADDLYSEMQEEGCV 467
               A  L+ +MQ+ GC+
Sbjct: 603 RISEATQLFMKMQKLGCL 620



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 255/538 (47%), Gaps = 59/538 (10%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  Y+ +++ +    +   A  LF  M++ G  PD   Y TL+    + G  ++A+   Q
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285

Query: 79  QMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           +M  D      +    L+ YS +I+   K     +A  +F  +K+ GI+PD+++Y T+I+
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F  +  +++A+ L  EM + G++PD  + S L+++  +  K +EA  +   + +  C  
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ TC  ++           A +LF  M+K+G  P+VV+  TL++   ++     A+ L 
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465

Query: 253 RLMQRK------EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           + M           + N ++Y+ +I    K    ++A  L +EM+  G+ P+ I+Y+++I
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
             + ++GK   A  LF ++   GV+ D   +  +I    + G V  A  LL  + Q    
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-------------- 408
           PNT+   T +  L    RI EAT +F +    G + D+  +G +++              
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 409 ---LFSRNKKYA-----NVI-------------------EVFEKMRSAGYFPDSHIIALV 441
              + S   +Y      +VI                   E+F++M++ G  P+      +
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           ++ + +  + E A  L++EM ++G V  + V + ++ ++G  K+  + ++LF++++++
Sbjct: 706 IHGFCRSGKLEDAKHLFNEMVDQG-VQLNAVTYSVM-IHGFCKEGQIDKALFQKMEAN 761



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 229/481 (47%), Gaps = 20/481 (4%)

Query: 7   DWINEEARYS----PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +N+ ++Y     P++ +Y++++  + + ++ + A  LF EM+ +G+ PD  +Y++LI 
Sbjct: 105 EMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 164

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            F + G ++ A     +M    +  D+   S LI++  K     +A  +   +   G + 
Sbjct: 165 GFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 224

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V Y+T+I          EA  L   M++ G +PD ++Y TL+    +      AL + 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 183 AEM-NE-----VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            EM N+     + C   L + +I+ID   +     +A  LF  M+  GI P V+SY TL+
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             +  +  + +A  LF  M    I+ +V T + +I +  K  +  +A  L++ +  RG  
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA--- 353
           P+ +T +T++       ++ +A  LF K++  G   + V   T++    + G +  A   
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 354 -KRLLHELR------QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
            K +L +        +PN I     I  L + GR +EA  +F++    G + D+  +  +
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F R+ K+ +   +F +M   G  PD    +++++   K  +   A++L   M + GC
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584

Query: 467 V 467
           +
Sbjct: 585 I 585



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 229/481 (47%), Gaps = 23/481 (4%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  Y+ +++ +    +   A  LF  M++ G  PD   Y TL+    + G  + A+   Q
Sbjct: 45  IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 104

Query: 79  QMEQD------RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           +M  D      +    LV YS +I+   K     +A  +F  +K+ G++PD+++Y ++I+
Sbjct: 105 EMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 164

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F ++  +++A+ L  EM + G++ D  + S L+++  +  K +EA  +   M +  C L
Sbjct: 165 GFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 224

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +I          +A RLF SM+K+G  P  ++Y TL++   +      A+ L 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 253 RLMQRK------EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           + M         + +  +++Y+ +I    K    ++A  L +EM+ +GI P+ I+Y+T+I
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
             +  +GK ++A  LF ++   G++ D      +I    + G V  A +LL  + Q   I
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 367 PRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P     T L +      RI +AT +F +    G + ++     +++   ++      +E+
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 423 FEKMRS------AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            + M S          P++   +++++   K    + A +L+ EM+  G V  D + +  
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG-VIPDVISYTS 523

Query: 477 L 477
           L
Sbjct: 524 L 524



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 228/476 (47%), Gaps = 22/476 (4%)

Query: 7   DWINEEARYS----PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +N+  RY     P++ +Y++++  + + ++ + A  LF EM+ +GI PD  +Y+TLI 
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            F   G ++ A     +M    +  D+   S LI++  K     +A  +   +   G +P
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V   T++          +A  L  +M++ G  P+ V+ +TL+    ++     AL + 
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465

Query: 183 AEMNE------VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
             M        +NC  +  + +I+ID   +     +A  LF  M+ +G+ P V+SY +L+
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             +  +  + +A +LF  M    ++ +V T++ +I +  K  +  +A  L++ M  RG  
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA--- 353
           PN +TY+T++       ++  A  LF K++  G   D V Y T++    + G +  A   
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 354 -KRLLHELRQ------PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
            K++L +  Q      P+ I     I  L + GR +EA  +F++    G + ++  +  +
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           I  F R+ K  +   +F +M   G   ++   +++++ + K  + + A  L+ +M+
Sbjct: 706 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 204/468 (43%), Gaps = 51/468 (10%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M   GI PD  T   LI  F KEG    A   L+ M Q     D+V YS LI+       
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTM---------------------------------- 130
            S+A  +F  +K  G  PD +AY T+                                  
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 131 -------INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
                  I+   K +   EAR L +EM+ QG+ PD +SY++L++ +  + K+ +A  +F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM +V    D+TT +++ID+  +     +A+ L   M + G    +V+Y+TL++      
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR----GI--EP 297
              EA  LF  MQ+     + + Y T++K   ++     A  L QEM N     GI  +P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             I+YS II    K  + D A  LF+++++ G+  D + Y T+I  +   G    AK L 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 358 HELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           +E+     QP+       I +L + G++ EA  +       G + D+     +++     
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            + +   ++F KM+  G  P+    A ++    +    + A +L+  M
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 159/344 (46%), Gaps = 17/344 (4%)

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M   G++PD  +   L++++ +  K +EA  +   M +  C LD+ T + +I        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK------EIEQN 263
             +A +LF SM+K+G  P  ++Y TL++   +      A+HL + M         + +  
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           +V+Y+ +I    K    ++A  L +EM+ +G+ P+ I+Y+++I  + ++GK ++A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI----PRETAITILARAG 379
           ++   G+  D      +I    + G V  A  LL  + Q   I       T I  L    
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM-RSAGYF-----P 433
           RI EAT +F      G   D   +G +++   +       +++ ++M    G +     P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
                +++++   K R  + A +L+ EM+ +G +  D + +  L
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQG-IMPDVISYTTL 343


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 223/492 (45%), Gaps = 41/492 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P    Y  ++R +      +L   L  EMR+ G         + +  +  + +FD A+
Sbjct: 70  FAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV 129

Query: 75  SWLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             +    Q    +  D V+Y++L+ +  + S      S++S + + GI PD+V +NT++ 
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMK 189

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A   + A +++EEM  +GV PD  +++TL+  +VE      AL V A M E+ C  
Sbjct: 190 ALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N++I+ Y +L   +DA          G +P  ++YNT +    + +  G A+ + 
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M ++  + +V TYN ++    K+ + E+A  ++ +M +RG  P+  T++T+IA     
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369

Query: 313 GKLDR-----------------------------------AAMLFQKLRSSGVEIDPVLY 337
            +L+                                    A  LF+++++SG   D V Y
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I     +G +  A  LL ++       +TI   T I  L +  RIEEA  VF Q   
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G  ++   F  +I+   ++KK  +  E+  +M S G  P++     +L  Y K  + + 
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 454 ADDLYSEMQEEG 465
           A D+   M   G
Sbjct: 550 AADILETMTANG 561



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---- 72
           P V  +N +++ + RA Q   A  + +EM  RG+APD  T++TL+  F +EG  ++    
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 73  -------------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                          A+ ++QQ   D    D + Y+  +    +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A+ +   +   G  PD+  YN ++N   K    +EA+ ++ +M ++G  PD  +
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  ++       D+ T NI+I+   ++     A RLF  M+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YNTL+         G+A+ L + M+     ++ +TYNT+I    K +  E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  NAIT++T+I    K  K+D A  L  ++ S G++ + + Y +++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  V R     G  
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +++   R     + + +F +M   G  PD+    +V        G ++E   
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE--- 655

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM ++G +  FS    F+ML+
Sbjct: 656 AFDFMLEMVDKGFIPEFS---SFRMLA 679



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+ ++ C
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A   L QM       D+  ++ LI      +   +A+ +  ++   G+ PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K      A  L EEM+  G  PD V+Y+TL++      K  +AL +  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+    + +
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N +TYN+++  Y K  + +KA ++++ M   G E + +TY 
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  + + +R  G+   P  Y  ++ +  R   +  A  L  E+ + 
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVF 403
              P      I+ R      G I+EA     +  D G + + S F
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 69/245 (28%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +   +N ++  + + K+ + A  L ++M   G+ P+  TY++++T + K+G    A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI---- 131
            L+ M  +    D+V Y  LI    K      A+ +   ++  G+ P   AYN ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 132 ---NVFGKAKLF-----------------------------KEARLLIEEMREQGVKPDT 159
              N+     LF                             KEA   + EM ++G  P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 160 VSY----STLLNL-----------------------------YVENHKFVEALSVFAEMN 186
            S+      LLNL                             Y++  KF +AL+ F    
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732

Query: 187 EVNCP 191
           E+N P
Sbjct: 733 EINNP 737



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 6/176 (3%)

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P    Y  II   G  G LD   +L  ++R  G ++   +  + + +YE   L   A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 357 LHELRQP------NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           +    QP      +T+     + +L    +++    V+ +    G   D+  F  +++  
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            R  +    + + E+M S G  PD      ++  + +    E A  + + M E GC
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247


>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
 gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
          Length = 731

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 264/594 (44%), Gaps = 61/594 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +  W   +  Y  +VF YN++LR + RA +WEL    + EM    + P  +TYS L
Sbjct: 99  KAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYSIL 158

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +   G+ GM D AI + + M +  V  D V+ S  + L R+  D  +A   F  L S  +
Sbjct: 159 VDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENL 218

Query: 121 VPDLV-------AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           V            +NTMI+ +G+   F EA  +  EM + GV+  TV+++ ++++Y +  
Sbjct: 219 VDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAG 278

Query: 174 KFVEALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
           +  EA  +  +M +  +C  D+ T N +I++Y + D  +        MR  G+ P  V++
Sbjct: 279 RTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTF 338

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            TL+  Y    +  +A  L + M+      +   Y  MI +Y ++ +  KA ++ + + +
Sbjct: 339 RTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHS 398

Query: 293 R-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
           R G+E +  TY  ++ ++ +   LD+A  +F+  +++G++  P LY  M+ AY       
Sbjct: 399 RGGLEVS--TYVGVMDVYAEHKCLDQAREVFELAKNAGLKT-PSLYNVMMKAYGACDRFT 455

Query: 352 HAKRLLHELRQPNTIPRETA-------------------ITILARA-------------- 378
            A  +   + +    P E +                   + +L +A              
Sbjct: 456 DAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVV 515

Query: 379 ------GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 GR+ EA  VF++   +G   D+  +  ++  ++         +  + +++AG+ 
Sbjct: 516 SFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFV 575

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNMLES 491
           PD+ +   ++  Y  L     A+ +Y E+      VF+      ML+LY     F   E 
Sbjct: 576 PDTIVYTSMMKLYSNLGLTAEAEKIYEEISRLSPDVFAANT---MLNLYIKSGMFTEAEQ 632

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLN---DASRIMNR---MNKRRTFNS 539
           LF  +        +    ++  +Y  A ++    D +R+M+R   +   R FN 
Sbjct: 633 LFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNG 686



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 214/496 (43%), Gaps = 53/496 (10%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLI 96
           A  +F EM + G+     T++ +I  +GK G    A   + +M+Q +    D+  Y++LI
Sbjct: 248 ASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLI 307

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           E+  K            R++ SG+ PD V + T+I+ +    +  +A  L++EM   G  
Sbjct: 308 EMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFF 367

Query: 157 PDTVSYSTLLNLYV---------------------ENHKFVEALSVFAE------MNEV- 188
            D   Y+ ++ +YV                     E   +V  + V+AE        EV 
Sbjct: 368 IDQAMYTVMIAMYVRARDVSKAESVFRFLHSRGGLEVSTYVGVMDVYAEHKCLDQAREVF 427

Query: 189 ----NCPLDLTTC-NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
               N  L   +  N+M+  YG  D   DA  +F +M K G  P+  S+N+L+++  +  
Sbjct: 428 ELAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGR 487

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L      +  L++    + ++ + ++++  YG      +A  + +EM   G+E + I YS
Sbjct: 488 LLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYS 547

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            ++  + +AG    A      L+++G   D ++Y +M+  Y  +GL A A+++  E+ + 
Sbjct: 548 ALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISRL 607

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC--MIELFSRNKKYANV 419
            P+     T + +  ++G   EA  +FR A   G+   ++   C  M++L+    K    
Sbjct: 608 SPDVFAANTMLNLYIKSGMFTEAEQLFR-AMQRGK-PGLNEVACTMMLKLYREAGKIEQG 665

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           ++V   M       D+     V+  Y K      A +   EM+  G V S          
Sbjct: 666 LDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKEMRRAGLVPS---------- 715

Query: 480 YGARKDFNMLESLFER 495
              R  F+  E + ER
Sbjct: 716 ---RSTFSCFEEILER 728



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 10/297 (3%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL- 115
           Y+ ++  +G    F  A++  + ME+D  S +   +++LI+L  K     + + I  R+ 
Sbjct: 441 YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCK----GRLLEILQRVL 496

Query: 116 ---KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
              K++G  P L + +++++ +G     +EA  + +EM   GV+ D + YS LLN Y E 
Sbjct: 497 VLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEA 556

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
               EA      +       D      M+ +Y  L +  +A++++  + +  + P V + 
Sbjct: 557 GFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISR--LSPDVFAA 614

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NT+L +Y ++ +F EA  LFR MQR +   N V    M+K+Y ++ + E+  ++ + M  
Sbjct: 615 NTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSR 674

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           R +  +A  ++ +IA++ KAG +  A    +++R +G+      +       ER G+
Sbjct: 675 RFLITDARAFNGVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 16/311 (5%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           Q D  K  +   W  R+   + +V  YN LLR  G A  +      +  M  + +   + 
Sbjct: 94  QRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIF 153

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+ ++ ++G++   ++A    + M   G+EP+ +  ST + +  + G L+ A   F  L
Sbjct: 154 TYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGL 213

Query: 326 RSSGV-------EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----TIPRETAITI 374
            S  +         +P  + TMI  Y      A A ++  E+ +      T+     I +
Sbjct: 214 FSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHV 273

Query: 375 LARAGRIEEATWV---FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             +AGR  EA  +    +Q  D     D++ +  +IE++ +N K   V    E+MR +G 
Sbjct: 274 YGKAGRTREAELLVTKMKQRKDC--CPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGV 331

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD      ++++Y        A+ L  EM+  G      ++  M+++Y   +D +  ES
Sbjct: 332 SPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAES 391

Query: 492 LFERLDSDSNI 502
           +F  L S   +
Sbjct: 392 VFRFLHSRGGL 402


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 190/367 (51%), Gaps = 1/367 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ A++D +  +  + PSV  YN +L   +  K     + +   M +  +  +  TY+ L
Sbjct: 206 RAKALMDELVCKG-FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 264

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  + +    + A     +M +  +  D+ +Y+++I    K  +  +A  +F  +    +
Sbjct: 265 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 324

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP+   Y  +IN   KA   K A +++ +M+ +GV  + V ++TL++ Y +     EAL 
Sbjct: 325 VPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALR 384

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M +    +D  TCNI+   + + +  ++A RL  +M + G+ P+VVS++ L+ +Y 
Sbjct: 385 LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYC 444

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + + F EA  LF++M++K    +VVTYN  I+ Y K  + E+A  L+ EMQ RG+ P+  
Sbjct: 445 KEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTY 504

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+++I     +G +DRA  LF ++   G+  + V Y  +I    + G    A +L  E+
Sbjct: 505 TYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM 564

Query: 361 RQPNTIP 367
            +   +P
Sbjct: 565 NKEGIVP 571



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 201/435 (46%), Gaps = 7/435 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S F + + L+   R+   EL      +M   GI     +++ ++    K+G    A + +
Sbjct: 155 SCFEFLLALK---RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALM 211

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            ++        ++ Y+ L+    ++ D      I S ++ + +  ++  Y  +I  + ++
Sbjct: 212 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRS 271

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA  L +EM ++G++PD   Y++++N   +      A  +F EM E     +  T 
Sbjct: 272 SKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTY 331

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +I+   +    K A+ +   M+  G+D + V +NTL+  Y +  +  EA+ L  +MQ+
Sbjct: 332 GALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ 391

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K  E +  T N +   + +S   E+A  L+  M+ RG+ PN +++S +I I+ K      
Sbjct: 392 KGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAE 451

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA- 376
           A  LF+ +   G     V Y   I  Y + G +  A +L++E+++   +P     T L  
Sbjct: 452 ARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 511

Query: 377 ---RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
               +G ++ A  +F +    G  +++  +  +I   S++ +     +++++M   G  P
Sbjct: 512 GERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 571

Query: 434 DSHIIALVLNSYGKL 448
           D  I + ++ S  K+
Sbjct: 572 DDGIYSSLIASLHKV 586



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  + D + E  R  P+ + Y  ++    +A + + A  + ++M+ +G+  +R  ++TL
Sbjct: 311 RAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD-YSKAISIFSRLKSSG 119
           +  + K+GM D A+     M+Q     D     N+I      S+   +A  +   ++  G
Sbjct: 370 MDGYCKKGMIDEALRLQNIMQQKGFEID-AFTCNIIASGFCRSNRREEAKRLLLTMEERG 428

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P++V+++ +I+++ K + F EAR L + M ++G  P  V+Y+  +  Y +  K  EA 
Sbjct: 429 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAY 488

Query: 180 SVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            +  EM E     D  T   +ID     G +D A +   LF  M ++G++ +VV+Y  ++
Sbjct: 489 KLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE---LFNEMPQLGLNRNVVTYTVII 545

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
               +     EA  L+  M ++ I  +   Y+++I
Sbjct: 546 SGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 33/312 (10%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  PSV++YNTLL  Y E +  G    +  LM++  ++ NV TY  +I+ Y +S + E+A
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L  EM  +GIEP+   Y++II    K G + RA +LF ++                  
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE---------------- 321

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                     +RL+     PN       I    +AG ++ A  +       G   +  +F
Sbjct: 322 ----------RRLV-----PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ + +       + +   M+  G+  D+    ++ + + +    E A  L   M+E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426

Query: 464 EGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
            G V  + V F +L  +Y   ++F     LF+ ++          ++     Y +  ++ 
Sbjct: 427 RG-VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 485

Query: 523 DASRIMNRMNKR 534
           +A +++N M +R
Sbjct: 486 EAYKLINEMQER 497


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 215/443 (48%), Gaps = 9/443 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+ D +  E   +P V  +N ++  +    +   A  L ++M  +G+  D  TY T++
Sbjct: 210 AVALFDQM-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G   SA++ L +ME+  +  D+V+YS +I+   K   +S A  +FS +   GI 
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++  YN MI+ F     + +A+ L+ +M E+ + PD ++++ L++  V+  K  EA  +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM       D  T N MI  + + +   DA  +F  M      P VV++NT++ VY  
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   E + L R + R+ +  N  TYNT+I  + +      A +L QEM + G+ P+ IT
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
            + ++  + +  KL+ A  LF+ ++ S +++D V Y  +I    +   V  A  L   L 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+       I+       I +A  +F +  D G   D S +  +I    +  +  
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 418 NVIEVFEKMRSAGYFPDSHIIAL 440
             IE+  +MRS G+  D+  I +
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKM 647



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 210/432 (48%), Gaps = 8/432 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LFD+M + G+ P   T++TLI     EG    A + + +M    +  D+V Y  ++ 
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K+ D   A+++ S+++ + I PD+V Y+ +I+   K     +A+ L  EM E+G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +  +Y+ +++ +    ++ +A  +  +M E     D+ T N +I    +     +A++L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M    I P  V+YN+++  + +   F +A H+F LM       +VVT+NT+I +Y ++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRA 445

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++   L++E+  RG+  N  TY+T+I  + +   L+ A  LFQ++ S GV  D +  
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
             ++  +     +  A  L   ++      +T+     I  + +  +++EA  +F     
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+  +  MI  F      ++   +F KM+  G+ PD+     ++    K  E + 
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 454 ADDLYSEMQEEG 465
           + +L SEM+  G
Sbjct: 626 SIELISEMRSNG 637



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 232/504 (46%), Gaps = 29/504 (5%)

Query: 3   VAILDWINEEARYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           VAI  +   E R  P +++++N++++      +   +   F ++ + G  PD  T++TL+
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G+            +DR+S  L L+  ++E     + + +A+++F ++   G+ 
Sbjct: 184 -----HGL----------CLEDRISEALALFGYMVE-----TGFLEAVALFDQMVEIGLT 223

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P ++ +NT+IN         EA  L+ +M  +G+  D V+Y T++N   +      AL++
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            ++M E +   D+   + +ID   +     DA  LF  M + GI P+V +YN ++  +  
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              + +A  L R M  +EI  +V+T+N +I    K  +  +A  L  EM +R I P+ +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+++I  + K  + D A  +F  + S     D V + T+I  Y R   V    +LL E+ 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +     NT    T I        +  A  +F++    G   D      ++  F  N+K  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E+FE ++ +    D+    ++++   K  + + A DL+  +   G     Q +  M+
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 478 SLYGARKDFNMLESLFERLDSDSN 501
           S +  +   +    LF ++  + +
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGH 603



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 201/414 (48%), Gaps = 22/414 (5%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P+VF YN ++       +W  A  L  +M +R I PD  T++ LI+   KEG   
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A     +M    +  D V Y+++I    K + +  A  +F  + S    PD+V +NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNC 190
           +V+ +AK   E   L+ E+  +G+  +T +Y+TL++ + E      A  +F EM +   C
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P D  TCNI++  + + +  ++A  LF  ++   ID   V+YN ++    +     EA  
Sbjct: 500 P-DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  +    +E +V TYN MI  +        A  L  +M++ G EP+  TY+T+I    
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNT 365
           KAG++D++  L  ++RS+G   D     T+ +A E +  V+  + + + LR     + ++
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAF---TIKMAEEIICRVSDEEIIENYLRPKINGETSS 675

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           IPR   +  LA      E   + RQ        +   FG       RN+KY+N+
Sbjct: 676 IPR--YVVELAEELYTVEPWLLPRQTAPILNPGEWFYFG------KRNRKYSNL 721



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 196/427 (45%), Gaps = 21/427 (4%)

Query: 57  YSTLITCFGKEGMF------DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
           + T + C    G+F      D AIS  ++ME  R+  ++  ++ LI+        S ++S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 111 IFSRLKSSGIVPDLVAYNTMIN-------------VFGK--AKLFKEARLLIEEMREQGV 155
            F +L   G  PD+V +NT+++             +FG      F EA  L ++M E G+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P  ++++TL+N      + +EA ++  +M      +D+ T   +++   ++   K A  
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M +  I P VV Y+ ++    +     +A +LF  M  K I  NV TYN MI  + 
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                  A  L+++M  R I P+ +T++ +I+   K GKL  A  L  ++    +  D V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            Y +MI  + +      AK +   +  P+ +   T I +  RA R++E   + R+    G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            V + + +  +I  F          ++F++M S G  PD+    ++L  + +  + E A 
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522

Query: 456 DLYSEMQ 462
           +L+  +Q
Sbjct: 523 ELFEVIQ 529



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 173/382 (45%), Gaps = 34/382 (8%)

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V  + ++ ++V  ++   A+S++ +M     PL++ + NI+I  +        +   F  
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           + K+G  P VV++NTLL      +   EA+ LF  M      + V  ++ M++I      
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI------ 220

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                         G+ P  IT++T+I      G++  AA L  K+   G+ ID V Y T
Sbjct: 221 --------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++    ++G    A  LL ++ +    P+ +     I  L + G   +A ++F +  + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
              ++  + CMI+ F    ++++   +   M      PD     AL+  S  + + FE A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-A 385

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHHVVA 512
           + L  EM    C+F D V +  + +YG  K   F+  + +F+ + S   +      + + 
Sbjct: 386 EKLCDEMLHR-CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFDLMASPDVVT----FNTII 439

Query: 513 GIYERANRLNDASRIMNRMNKR 534
            +Y RA R+++  +++  +++R
Sbjct: 440 DVYCRAKRVDEGMQLLREISRR 461


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 17/475 (3%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I E     + P  F YN ++  + +    + A  + D M   G+ PD YTY++LI+ 
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A+  L QM     S + V Y+ +I    K +   +A  I   L S GI+PD
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPD 412

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N++I     +   K A  L EEM+ +G +PD  +Y+ L++    + K  EAL++  
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM    C  ++   N +ID + +    ++A+ +F  M   G+    V+YNTL+    +++
Sbjct: 473 EMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSK 532

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + +  +  TYN+++  + K+ + +KA +++Q M + G  P+ +TY+
Sbjct: 533 RVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYA 592

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I+   KAG++  A+ L + ++  G+ + P  Y  +I A  +      A RL  E+   
Sbjct: 593 TLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDK 652

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           +  P      I+ R      G I EA     +  + G + + S F  + E          
Sbjct: 653 SEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDT 712

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA--------DDLYSEMQEEG 465
           ++++ + +     F +  I    +  + K+R+F+ A        DD+Y      G
Sbjct: 713 LVKLVDMIMEKAKFSEREIST--IRGFLKIRKFQDALSTLGGILDDMYPRRSYRG 765



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 243/536 (45%), Gaps = 13/536 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + +W +++  + PS   Y  +LR + +A  +E    + +EM+  G   DR  +   +
Sbjct: 80  ALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFV 139

Query: 62  TCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIEL---ARKLSDYSKAISIFSRLKS 117
             +GK  ++D  +  ++ ME + R+  D   Y+ L+ +   A KL     A S   R + 
Sbjct: 140 ESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR- 198

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
             I  D+  +N +I    KA   + A L++EEM   G+ PD  +++T++  Y+E      
Sbjct: 199 --IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           AL +  +M E  CP    T N++I+ + +      A          G  P   +YNTL+ 
Sbjct: 257 ALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN 316

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              +      A+ +   M    ++ ++ TYN++I    K  E E+A  ++ +M +R   P
Sbjct: 317 GLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           NA+TY+ II+   K  ++D A  + + L S G+  D   + ++I           A  L 
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 358 HELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E++     P E      I  L  + ++EEA  + ++    G  +++ ++  +I+ F +N
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           K+     E+F++M   G   DS     +++   K +  E A  L  +M  EG       +
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 474 FQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIM 528
             +L+ +    D      + + +  S  N +      +++G+  +A R+  ASR++
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC-KAGRVQVASRLL 611



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 180/383 (46%), Gaps = 8/383 (2%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++    +  + + A     E    G  PD++TY+TL+    K G    A+  +  M  
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D+  Y++LI    KL +  +A+ I  ++ S    P+ V YN +I+   K     E
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLN--LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           A  +   +  +G+ PD  ++++L+       NHK   A+ +F EM    C  D  T N++
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK--SAMDLFEEMKGKGCRPDEFTYNML 454

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID        ++A  L   M   G   +VV YNTL+  + + +   EA  +F  M+ + +
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
            ++ VTYNT+I    KS   E A  LM +M   G+ P+  TY++++  + K G + +AA 
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILA 376
           + Q + SSG   D V Y T+I    + G V  A RLL  ++    +    A    I  L 
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF 634

Query: 377 RAGRIEEATWVFRQAFDAGEVKD 399
           +  R  EA  +FR+  D  E  D
Sbjct: 635 KRNRTHEAMRLFREMLDKSEPPD 657



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 221/491 (45%), Gaps = 48/491 (9%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST------------------- 59
           V  +N++++ + +A Q   A  + +EM   G++PD  T++T                   
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 60  ----------------LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
                           LI  F K+G  D A+S++Q+   +    D   Y+ L+    K+ 
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
               A+ +   +   G+ PD+  YN++I+   K    +EA  ++++M  +   P+ V+Y+
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            +++   + ++  EA  +   +       D+ T N +I         K A  LF  M+  
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  P   +YN L+     +    EA++L + M+     +NVV YNT+I  + K+   E+A
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             +  EM+ +G+  +++TY+T+I    K+ +++ AA L  ++   G+  D   Y +++  
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562

Query: 344 YERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + + G +  A  ++  +      P+ +   T I+ L +AGR++ A+ + R     G V  
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622

Query: 400 ISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV----LNSYGKLREFETA 454
              +  +I+ LF RN+ +   + +F +M      PD+    +V     N  G + E   A
Sbjct: 623 PHAYNPVIQALFKRNRTH-EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGE---A 678

Query: 455 DDLYSEMQEEG 465
            D   EM E G
Sbjct: 679 VDFTVEMIERG 689



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 212/475 (44%), Gaps = 4/475 (0%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V I+  + +E R  P    YNV+L  ++ A + +L       M +R I  D  T++ LI 
Sbjct: 152 VGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIK 211

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K      AI  +++M    +S D   ++ +++   +  +   A+ I  ++   G   
Sbjct: 212 ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPC 271

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
             V  N +IN F K     +A   I+E   +G +PD  +Y+TL+N   +      A+ V 
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
             M       D+ T N +I    +L   ++A ++   M      P+ V+YN ++    + 
Sbjct: 332 DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKE 391

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  + RL+  K I  +V T+N++I+    S  H+ A +L +EM+ +G  P+  TY
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR- 361
           + +I     + KL+ A  L +++  +G   + V+Y T+I  + +   +  A+ +  E+  
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511

Query: 362 ---QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
                +++   T I  L ++ R+E+A  +  Q    G   D   +  ++  F +      
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             ++ + M S+G  PD    A +++   K    + A  L   +Q +G V +   +
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAY 626



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 86/487 (17%), Positives = 171/487 (35%), Gaps = 147/487 (30%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLF-WSMRKMGIDPSVVSYNTLLR------------ 237
           P D T   ++  +  Q D    A R+F W+ ++    PS   Y  +LR            
Sbjct: 59  PPDFTPKQLIETLRRQTDEVA-ALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117

Query: 238 -----------------------VYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNT---- 269
                                   YG+ EL+ E + + ++M+ +  I+ +   YN     
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177

Query: 270 -------------------------------MIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
                                          +IK   K+ +   A  +M+EM + G+ P+
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237

Query: 299 AITYSTI-----------------------------------IAIWGKAGKLDRAAMLFQ 323
             T++TI                                   I  + K G++D+A    Q
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--------------- 368
           +  S G   D   Y T++    ++G   HA  ++  +      P                
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357

Query: 369 --ETAITIL----------------------ARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             E A+ IL                       +  R++EAT + R     G + D+  F 
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+    +  + + +++FE+M+  G  PD     ++++S    R+ E A +L  EM+  
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN 477

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           GC  +  ++  ++  +   K     E +F+ ++          ++ +     ++ R+ DA
Sbjct: 478 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537

Query: 525 SRIMNRM 531
           +++M++M
Sbjct: 538 AQLMDQM 544


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 225/535 (42%), Gaps = 41/535 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPSV  Y+++L    +   +  A  L DEMR +G  PD  TY+ LI     EG  D A++
Sbjct: 283 SPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALN 342

Query: 76  WLQQMEQDRVSGDLVLYSNLIE--------------LARKLSD----------------- 104
            L  +       D V Y+ +++              LA   S+                 
Sbjct: 343 ILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLC 402

Query: 105 ----YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
                 +AI +   +   G V D+V Y+++++         +A  L+  ++  G KPDT+
Sbjct: 403 QQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 462

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T+L       ++  A  + AEM   +CP D  T N ++    Q  +   A R+   M
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            + G  P +V+YN ++          +A+ L   +Q    + ++VT+NT++K        
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E A  LM  M      P+ +T++T+I    + G L +A    + +  +G   +   Y  +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642

Query: 341 IVAYERVGLVAHAKRLLHELRQ--PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           + A  + G    A  LL  +    P+ I   T I+ L +AG++EEA  + R     G   
Sbjct: 643 VDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCP 702

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D + +  +     R       + +  +++  G  PD+     VL  + + R  + A D +
Sbjct: 703 DTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCF 762

Query: 459 SEMQEEGCVFSDQVHFQMLS--LYGARKD--FNMLESLFERLDSDSNINKKELHH 509
           + M   GC+  +  +  +L    YG   D    +L SL      D  + ++E H+
Sbjct: 763 AHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKLIEEESHY 817



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 212/475 (44%), Gaps = 7/475 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F +N ++R +    +   A  +FD+M  RG +P   TYS L+    KE  +  A+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L +M       D+V Y+ LI       D  +A++I S L S G  PD V Y  ++   
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSL 366

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             ++ +KE   L+ EM      PD V+++T++    +      A+ V   M+E  C  D+
Sbjct: 367 CGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADI 426

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D    +    DA  L   ++  G  P  ++Y T+L+     E +  A  L   
Sbjct: 427 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAE 486

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M   +   + VT+NT++    +    ++A  ++++M   G  P+ +TY+ II        
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESC 546

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----T 370
           +D A  L   L+S G + D V + T++     V     A++L+  + + N  P E    T
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNT 606

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            IT L + G + +A    +   + G V + S +  +++   +  K    +E+   M +  
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG- 665

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
             PD      V+++  K  + E A DL   M   G +  D   ++ L+    R+D
Sbjct: 666 -TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNG-LCPDTTTYRSLAYGVCRED 718



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 200/450 (44%), Gaps = 7/450 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +V  YN ++    RA + E A  L + M      PD +T++ LI      G    A++
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALA 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M     S  +V YS L++   K S Y +A+++   +++ G  PD+V YN +IN   
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 EA  ++  +   G KPD V+Y+ +L     + ++ E   + AEM   NC  D  
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++    Q  +   A  +   M + G    +V+Y+++L    +     +A+ L   +
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +    + + + Y T++K    + + E+A  LM EM      P+ +T++T++A   + G +
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           DRA  + +++  +G   D V Y  +I        +  A  LL +L+    +P+ +   T 
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +  L    R E+A  +      +    D   F  +I    +       IE  + M   G 
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEM 461
            P+S   ++V+++  K  + + A +L S M
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 44/347 (12%)

Query: 170 VENHKFVEALSVFAEMNEV---NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           V+  +  EAL +F  M      NCP  +  CNI+I          DA+R+F ++   G  
Sbjct: 161 VQRGEIDEALVLFDSMASGGGRNCP-PVVPCNILIKRLCSDGRVSDAERVFAAL---GPS 216

Query: 227 PSVVSYNTLLRVYGEA-----------------ELF---------------GEAIHLFRL 254
            +VV+YNT++  Y  A                 + F                +A+ +F  
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  +    +VVTY+ ++    K   + +A  L+ EM+ +G EP+ +TY+ +I      G 
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----T 370
           +D A  +   L S G + D V Y  ++ +          + LL E+   N  P E    T
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T L + G ++ A  V     + G V DI  +  +++      +  + +E+  +++S G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             PD+     VL       ++E A++L +EM    C   D+V F  +
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP-PDEVTFNTV 502



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 23/275 (8%)

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G    L  L+QR EI++ +V +++M    G++                   P  +  + +
Sbjct: 152 GAKRRLRSLVQRGEIDEALVLFDSMASGGGRNC------------------PPVVPCNIL 193

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPN 364
           I      G++  A  +F  L  S      V Y TM+  Y R G +  A+RL++ +   P+
Sbjct: 194 IKRLCSDGRVSDAERVFAALGPSATV---VTYNTMVNGYCRAGRIEDARRLINGMPFPPD 250

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T      I  L   GRI +A  VF      G    +  +  +++   +   Y   + + +
Sbjct: 251 TFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLD 310

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGAR 483
           +MR+ G  PD     +++N+     + + A ++ S +   GC      +  +L SL G+ 
Sbjct: 311 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE 370

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
           +   + E L E   ++   ++   + +V  + ++ 
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQG 405



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++ A L+ ++     +P +  YN V+ N+ +A + E A  L   M   G+ PD  TY +L
Sbjct: 651 KAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSL 710

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
                +E   D A+  L++++   +S D   Y++++    +      AI  F+ + SSG 
Sbjct: 711 AYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGC 770

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           +PD   Y  ++       L  EA+ L+  +   GV
Sbjct: 771 MPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 224/496 (45%), Gaps = 41/496 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF +N+V+  + +  +   A  LF  M++ G  PD  T+++LI  +GK G  D    
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M +     D+V Y+ LI    K      A   F+ +K  G++ ++V ++T ++ F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L  +MR +G+  +  +Y+ L++   +  +  +A+ +  EM     PL++ 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  +++D   +     +A+ +   M K G+  + + Y TL+  +   +   +A+ L   M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +E ++  Y  +I+      + ++A +L+ +M   G+EPN I Y+T++    K+GK+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  + QK+  SG + + + Y  +I    + G +  A    +++R     PN       
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 372 ITILARAGRIEEATWVFRQ----------------------------AF-------DAGE 396
           +  L + G + EA  +F +                            AF       D+G 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  + C I  F          EVF +M   G  PD  +   +++ Y KL   E A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS 664

Query: 457 LYSEMQE--EGCVFSD 470
           L  EM+     C  SD
Sbjct: 665 LQDEMERVLPSCTDSD 680



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 7/312 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+  + EQ   P+  +++ +++   +  +  EA S+F+ M E+ C  D+ T N +ID YG
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     + ++L   MR+ G    VV+YN L+  + +      A   F  M+R+ +  NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++T +  + K     +A  L  +M+ RG+  N  TY+ +I    KAG+LD A +L  ++
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI---- 381
              GV ++ V Y  ++    +   VA A+ +L  + +      E   T L     +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+A  +  +  + G   DIS++G +I+      K      +  KM  +G  P+  I   +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 442 LNSY---GKLRE 450
           +++    GK+ E
Sbjct: 475 MDACFKSGKVPE 486



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 155/324 (47%), Gaps = 17/324 (5%)

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD-ADRLFWSMRK 222
           TLL++  +     +A+   A + E+  P +  TCN ++     L +A+D + RL   + +
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL-----LRLARDRSGRLVRRLFE 181

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+V ++N ++    +     EA  LF  M+      +VVT+N++I  YGK  E ++
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
              L++EM+  G + + +TY+ +I  + K G+++ A   F  ++  GV  + V + T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ + GLV  A +L  ++R       E   T L     +AGR+++A  +  +    G   
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           ++  +  +++   + +K A   +V   M  AG   +  +   +++ +   +  E A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGA 482
           SEM+ +G           +SLYGA
Sbjct: 422 SEMKNKGLELD-------ISLYGA 438



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+A    +   Y  ++      K  E A GL  EM+ +G+  D   Y  LI         
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S L +M++  +  + ++Y+ +++   K     +AI++  ++  SG  P+++ Y  +
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA    EA     +MR+ G+ P+  +Y+ L++   +N    EA+ +F EM     
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGM 569

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD      ++D Y +     DA  L   M   G+   +  Y   +  +    +  EA  
Sbjct: 570 SLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEARE 629

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           +F  M    I  +   YN +I  Y K    E+A +L  EM+
Sbjct: 630 VFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L  I +   + P+V  Y  ++  + +A   + A   F++MR  G+ P+   Y+ L+
Sbjct: 487 AIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  + A+    +M    +S D V+Y+ L++   K  +   A ++ +++  SG+ 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            DL  Y   I+ F    +  EAR +  EM   G+ PD   Y+ L++ Y +     EA+S+
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 182 FAEMNEV 188
             EM  V
Sbjct: 666 QDEMERV 672



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 37/248 (14%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  +++ +    + + A  L  +M + G+ P+   Y+T++    K G    AI+ LQ++ 
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                 +++ Y  LI+   K     +AIS F++++  G+ P++ AY  +++   K     
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVEN----------------------------- 172
           EA  L  EM  +G+  D V Y+ LL+ Y++                              
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 173 ------HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                 +   EA  VF+EM       D    N +I  Y +L   ++A  L   M +  + 
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VL 673

Query: 227 PSVVSYNT 234
           PS    +T
Sbjct: 674 PSCTDSDT 681



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 8/237 (3%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +TLL V  +  L  +A+     ++   +  N  T N ++      L  +++  L++ +  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILL----RLARDRSGRLVRRLFE 181

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           +   PN  T++ +I    K G+L  A  LF +++  G   D V + ++I  Y + G +  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            ++L+ E+R    + + +     I    + GR+E A   F      G + ++  F   ++
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            F +       +++F +MR  G   +      +++   K    + A  L  EM  +G
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 12/156 (7%)

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L RAA+     RS+   +      T++      GL+  A R +  +R+    PNT    T
Sbjct: 107 LHRAALALGPRRSALASV----VDTLLSVLADRGLLDDAVRAVARVRELRVPPNT---RT 159

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
              IL R  R + +  + R+ F+     ++  F  +I+   +  + A    +F +M+  G
Sbjct: 160 CNHILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             PD      +++ YGK  E +  + L  EM+  GC
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 205/449 (45%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL+ +  AK+W     L +EM +    P+  T++TLI+   + G+F+     
Sbjct: 262 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 321

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ ++E   L+ EM ++    D V+++ L++ + +N      + +  +M E  C  D+ T
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 441

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  SM   G  P+ +SY  +L+    AE + +A  L   M 
Sbjct: 442 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    N +T+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK D
Sbjct: 502 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   + + G+                                PNTI   +  + L+
Sbjct: 562 EALELLNVMVNKGM-------------------------------SPNTIIYSSIASALS 590

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R GRI +   +F    D     D  ++  +I    +  +    IE    M S+G  P+  
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
              +++         + A ++ +E+  +G
Sbjct: 651 TYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 229/533 (42%), Gaps = 39/533 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+ + Y  V+R +    +   A  + DEM +RG AP    Y  ++    + G F SA+ 
Sbjct: 156 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 215

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ +     + D+   + ++          +A+ +   L S G  PD+V+YN ++    
Sbjct: 216 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 275

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            AK +   + L+EEM      P+ V+++TL++    N  F     V A+M E  C  D+ 
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 335

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID   +    + A  +   M   G+ P+VV YNTLL+    AE + E   L   M
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K+   + VT+N ++  + ++   ++   L+++M   G  P+ ITY+T+I  + K G +
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 316 DRAAMLFQKLRSSGVE-----------------------------------IDPVLYQTM 340
           D A ML + + + G +                                   ++P+ + T+
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515

Query: 341 IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    + GLV  A  LL ++      P+ I   T I  L +AG+ +EA  +     + G 
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +  ++  +    SR  +   VI++F+ ++      D+ +   V++S  K  E E A +
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + M   GCV ++  +  ++    +       + +   L S   + K  + H
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 688



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/427 (21%), Positives = 184/427 (43%), Gaps = 9/427 (2%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P+   Y  ++          +A  +++EM  +G  P    Y  +L        F  A+
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            V  +++   C LD+  CN++++         +A  L   +   G +P VVSYN +L+  
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             A+ +G    L   M R     N+VT+NT+I    ++   E+   ++ +M   G  P+ 
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+TII    K G L+ A  +  ++ S G++ + V Y T++            + LL E
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394

Query: 360 LRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +   +    +    IL     + G ++    +  Q  + G + D+  +  +I  F +   
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 454

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               + + + M + G  P++    +VL        +  A+DL S+M ++GC   + + F 
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFN 513

Query: 476 MLSLYGARKDF--NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM-N 532
            L  +  +K      +E L + L +  + +      V+ G+  +A + ++A  ++N M N
Sbjct: 514 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTDEALELLNVMVN 572

Query: 533 KRRTFNS 539
           K  + N+
Sbjct: 573 KGMSPNT 579



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 1/131 (0%)

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           Y  M+  Y R G +  A+RL   +   PN       +  L   GRI +A  V  +    G
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
                 ++  ++E   R   + + + V E + + G   D     LVLN+       + A 
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 456 DLYSEMQEEGC 466
            L  ++   GC
Sbjct: 250 HLLRDLPSFGC 260


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 205/449 (45%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL+ +  AK+W     L +EM +    P+  T++TLI+   + G+F+     
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ ++E   L+ EM ++    D V+++ L++ + +N      + +  +M E  C  D+ T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVIT 404

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  SM   G  P+ +SY  +L+    AE + +A  L   M 
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    N +T+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK D
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   + + G+                                PNTI   +  + L+
Sbjct: 525 EALELLNVMVNKGM-------------------------------SPNTIIYSSIASALS 553

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R GRI +   +F    D     D  ++  +I    +  +    IE    M S+G  P+  
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
              +++         + A ++ +E+  +G
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 230/533 (43%), Gaps = 39/533 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+ + Y  V+R +    +   A  + DEM +RG AP    Y  ++    + G F SA+ 
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ +     + D+   + ++          +A+ +   L S G  PD+V+YN ++    
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            AK +   + L+EEM      P+ V+++TL++    N  F     V A+M E  C  D+ 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID   +    + A  +   M   G+ P+VV YNTLL+    AE + E   L   M
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K+   + VT+N ++  + ++   ++   L+++M  RG  P+ ITY+T+I  + K G +
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 316 DRAAMLFQKLRSSGVE-----------------------------------IDPVLYQTM 340
           D A ML + + + G +                                   ++P+ + T+
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 341 IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    + GLV  A  LL ++      P+ I   T I  L +AG+ +EA  +     + G 
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +  ++  +    SR  +   VI++F+ ++      D+ +   V++S  K  E E A +
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + M   GCV ++  +  ++    +       + +   L S   + K  + H
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/427 (21%), Positives = 184/427 (43%), Gaps = 9/427 (2%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P+   Y  ++          +A  +++EM  +G  P    Y  +L        F  A+
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            V  +++   C LD+  CN++++         +A  L   +   G +P VVSYN +L+  
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             A+ +G    L   M R     N+VT+NT+I    ++   E+   ++ +M   G  P+ 
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+TII    K G L+ A  +  ++ S G++ + V Y T++            + LL E
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 360 LRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +   +    +    IL     + G ++    +  Q  + G + D+  +  +I  F +   
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGL 417

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               + + + M + G  P++    +VL        +  A+DL S+M ++GC   + + F 
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFN 476

Query: 476 MLSLYGARKDF--NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM-N 532
            L  +  +K      +E L + L +  + +      V+ G+  +A + ++A  ++N M N
Sbjct: 477 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTDEALELLNVMVN 535

Query: 533 KRRTFNS 539
           K  + N+
Sbjct: 536 KGMSPNT 542



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 1/131 (0%)

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           Y  M+  Y R G +  A+RL   +   PN       +  L   GRI +A  V  +    G
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
                 ++  ++E   R   + + + V E + + G   D     LVLN+       + A 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 456 DLYSEMQEEGC 466
            L  ++   GC
Sbjct: 213 HLLRDLPSFGC 223


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 208/447 (46%), Gaps = 8/447 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN ++  +++    E  H L++EM   G   PD  TYS LI  FGK G  DS
Sbjct: 189 KCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDS 248

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AIS   +M+++ +     +Y+ ++ +  KL    KA+ +   +K  G    +  Y  +I 
Sbjct: 249 AISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA   +EA  +   M ++G KPD V  + L+NL  +  +  +A+ +F EM  + C  
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP 368

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFW--SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           ++ T N +I    +   A+ ++   W   M++ G+ PS  +Y+ L+  + +     +A+ 
Sbjct: 369 NVVTYNTVIKALFE-SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K        Y ++I   GK+  +E A  L QE++      +A  Y+ +I   G
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+L  A  LF +++  G   D   Y  ++    RVG+   A  LL  + +    P   
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           +  I+    AR G  + A  +F +  ++    D+  +  ++   SR   +    ++ ++M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFET 453
            S G+  D    + +L + GK+ E  T
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDEDHT 634



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 8/448 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM--EQ 82
           +++ + +AK    A  +F +++ R   P   TY+++I    +EG  +       +M  E 
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
           D +  D V YS LI    KL     AIS+F  +K +G+ P    Y T++ ++ K    ++
Sbjct: 225 DCLP-DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEK 283

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L++EM+E+G      +Y+ L+    +  K  EA S+F  M +  C  D+   N +I+
Sbjct: 284 ALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLIN 343

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHLFRLMQRKEIE 261
           + G+     DA +LF  M  +   P+VV+YNT+++   E++    EA   +  M+   + 
Sbjct: 344 LLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVV 403

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + + A  L
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           FQ+LR +       +Y  MI    + G ++ A  L +E+++    P+       ++ + R
Sbjct: 464 FQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVR 523

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G  +EA  + R   + G   D++    ++  F+R       IE+F +M+++   PD   
Sbjct: 524 VGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVS 583

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
              VL    +   FE A  L  EM  +G
Sbjct: 584 YNTVLGCLSRAGMFEEAAKLMKEMNSKG 611



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/532 (21%), Positives = 227/532 (42%), Gaps = 80/532 (15%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           ++R    D  TY  LI C  + GM       +Q+M                         
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEM------------------------- 150

Query: 106 SKAISIFSRLKSSGIV--PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
                    ++S+ ++   DL   + ++ V GKAK+  +A  +  +++ +  KP + +Y+
Sbjct: 151 ---------VRSTCVIGPADL---SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYN 198

Query: 164 TLLNLYVENHKFVEALSVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           +++ + ++     +   ++ EM NE +C  D  T + +I  +G+L     A  LF  M++
Sbjct: 199 SMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKE 258

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P+   Y T+L +Y +     +A+ L + M+ K     V TY  +IK  GK+ + E+
Sbjct: 259 NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEE 318

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A ++   M   G +P+ +  + +I + GKAG+L  A  LF+++ S     + V Y T+I 
Sbjct: 319 AYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIK 378

Query: 343 A-YERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEV 397
           A +E     + A     ++++   +P     +IL     +  R+E+A  +  +  + G  
Sbjct: 379 ALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFA 438

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
              + +  +I    + K+Y    E+F+++R    +  + + A+++   GK      A DL
Sbjct: 439 PCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDL 498

Query: 458 YSEMQEEGC-----------------VFSDQVH--FQMLSLYGARKDFNMLE-------- 490
           ++EM++ GC                   +D+ H   + +   G   D N           
Sbjct: 499 FNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFAR 558

Query: 491 --------SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                    +F R+ +         ++ V G   RA    +A+++M  MN +
Sbjct: 559 TGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSK 610



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 1/267 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           E  + +P+V  YN V++ +  +K +   A   +++M++ G+ P  +TYS LI  F K   
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A+  L++M++   +     Y +LI    K   Y  A  +F  L+ +        Y  
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAV 481

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI   GK     EA  L  EM++ G  PD  +Y+ L++  V      EA S+   M E  
Sbjct: 482 MIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG 541

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  DL + NI+++ + +    K A  +F  M+   I P VVSYNT+L     A +F EA 
Sbjct: 542 CTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAA 601

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            L + M  K  E +++TY+++++  GK
Sbjct: 602 KLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  ++P   AY  ++  + +AK++E A+ LF E+R+         Y+ +
Sbjct: 424 KALLLLEEMDEKG-FAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G    A+    +M++   + D+  Y+ L+    ++    +A S+   ++ +G 
Sbjct: 483 IKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL ++N ++N F +    K A  +   M+   +KPD VSY+T+L        F EA  
Sbjct: 543 TPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAK 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EMN      DL T + +++  G++D
Sbjct: 603 LMKEMNSKGFEYDLITYSSILEAVGKID 630



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P + ++N++L    R    + A  +F  M+   I PD  +Y+T++ C  + GMF
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKA 108
           + A   +++M       DL+ YS+++E   K+  D++ A
Sbjct: 598 EEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPA 636


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 190/367 (51%), Gaps = 1/367 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ A++D +  +  + PSV  YN +L   +  K     + +   M +  +  +  TY+ L
Sbjct: 210 RAKALMDELVCKG-FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 268

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  + +    + A     +M +  +  D+ +Y+++I    K  +  +A  +F  +    +
Sbjct: 269 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 328

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP+   Y  +IN   KA   K A +++ +M+ +GV  + V ++TL++ Y +     EAL 
Sbjct: 329 VPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALR 388

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   M +    +D  TCNI+   + + +  ++A RL  +M + G+ P+VVS++ L+ +Y 
Sbjct: 389 LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYC 448

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + + F EA  LF++M++K    +VVTYN  I+ Y K  + E+A  L+ EMQ RG+ P+  
Sbjct: 449 KEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTY 508

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+++I     +G +DRA  LF ++   G+  + V Y  +I    + G    A +L  E+
Sbjct: 509 TYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM 568

Query: 361 RQPNTIP 367
            +   +P
Sbjct: 569 NKEGIVP 575



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 201/435 (46%), Gaps = 7/435 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S F + + L+   R+   EL      +M   GI     +++ ++    K+G    A + +
Sbjct: 159 SCFEFLLALK---RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALM 215

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            ++        ++ Y+ L+    ++ D      I S ++ + +  ++  Y  +I  + ++
Sbjct: 216 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRS 275

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA  L +EM ++G++PD   Y++++N   +      A  +F EM E     +  T 
Sbjct: 276 SKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTY 335

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +I+   +    K A+ +   M+  G+D + V +NTL+  Y +  +  EA+ L  +MQ+
Sbjct: 336 GALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ 395

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K  E +  T N +   + +S   E+A  L+  M+ RG+ PN +++S +I I+ K      
Sbjct: 396 KGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAE 455

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA- 376
           A  LF+ +   G     V Y   I  Y + G +  A +L++E+++   +P     T L  
Sbjct: 456 ARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 515

Query: 377 ---RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
               +G ++ A  +F +    G  +++  +  +I   S++ +     +++++M   G  P
Sbjct: 516 GERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 575

Query: 434 DSHIIALVLNSYGKL 448
           D  I + ++ S  K+
Sbjct: 576 DDGIYSSLIASLHKV 590



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  + D + E  R  P+ + Y  ++    +A + + A  + ++M+ +G+  +R  ++TL
Sbjct: 315 RAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD-YSKAISIFSRLKSSG 119
           +  + K+GM D A+     M+Q     D     N+I      S+   +A  +   ++  G
Sbjct: 374 MDGYCKKGMIDEALRLQNIMQQKGFEID-AFTCNIIASGFCRSNRREEAKRLLLTMEERG 432

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P++V+++ +I+++ K + F EAR L + M ++G  P  V+Y+  +  Y +  K  EA 
Sbjct: 433 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAY 492

Query: 180 SVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            +  EM E     D  T   +ID     G +D A +   LF  M ++G++ +VV+Y  ++
Sbjct: 493 KLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE---LFNEMPQLGLNRNVVTYTVII 549

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
               +     EA  L+  M ++ I  +   Y+++I
Sbjct: 550 SGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 33/312 (10%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  PSV++YNTLL  Y E +  G    +  LM++  ++ NV TY  +I+ Y +S + E+A
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L  EM  +GIEP+   Y++II    K G + RA +LF ++                  
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE---------------- 325

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                     +RL+     PN       I    +AG ++ A  +       G   +  +F
Sbjct: 326 ----------RRLV-----PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ + +       + +   M+  G+  D+    ++ + + +    E A  L   M+E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430

Query: 464 EGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
            G V  + V F +L  +Y   ++F     LF+ ++          ++     Y +  ++ 
Sbjct: 431 RG-VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 489

Query: 523 DASRIMNRMNKR 534
           +A +++N M +R
Sbjct: 490 EAYKLINEMQER 501


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 210/459 (45%), Gaps = 4/459 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV++    RA   + A  L D M  +G+ P   T+++++    K   FD A   
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M+Q  V+ D+  ++ LI    ++ +  +A+  +  ++  G+ PD+V+++ +I +F  
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EM+  G+ PD V Y+ ++  +       EAL V  EM  + C  D+ T
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +     DA+ L   M++ G+ P + ++ TL+  Y     F +A+ LF  + 
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  +VV YN++I    +  +  KA  L  +M  R I PN +TYS +I    + G+++
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A     ++ S G   + + Y ++I  Y R G V   ++ L ++ Q N +P       L 
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549

Query: 377 RAGRIEEATWVFRQAFDAGEVK----DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                EE        F+  E +    D   +  +I  FS          VF+KM ++G  
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIE 609

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           PD +    ++N +      + A  L+ EM   G    D+
Sbjct: 610 PDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 197/394 (50%), Gaps = 6/394 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++   +P V ++N+++    R  + E A   + EM+QRG+ PD  ++S LI  F   G  
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A ++L++M+   +  D V+Y+ +I    +    S+A+ +   +   G +PD+V YNT+
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K     +A  L+ EM+E+GV PD  +++TL++ Y  +  F +AL +F  +     
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 191 PLDLTTCNIMID-VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             D+   N +ID +  + D+AK A+ L+  M    I P+ V+Y+ L+  + E     EA 
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAK-ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
                M  K    N++TYN++IK Y +S   +K    +Q+M    I P+ IT++T+I  +
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-R 368
            K   +  A  +F  +    V+ D V Y  +I  +   G +  A R+  ++      P R
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612

Query: 369 ETAITIL---ARAGRIEEATWVFRQAFDAGEVKD 399
            T ++++     AG  +EA  +  +    G   D
Sbjct: 613 YTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 208/452 (46%), Gaps = 4/452 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + +  N+++ +  ++ +++ A  +  EM +R + PD  T++ LI    + G  D+AI+ +
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             M    +   +V ++++++   K   + KA  +F  +    + PD+ ++N +I  F + 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA    +EM+++GV PD VS+S L+ L+    K   A +   EM  +    D    
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            ++I  + +     +A R+   M  +G  P VV+YNTLL    +     +A  L   M+ 
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  ++ T+ T+I  Y +    EKA  L   + ++ + P+ + Y+++I    + G L +
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  L+  + +  +  + V Y  +I ++   G V  A   L E+      PN +   + I 
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              R+G +++     ++      + D+  F  +I  + + +       VF  M      P
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           D+    +++N + +    E A  ++ +M   G
Sbjct: 576 DAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/482 (23%), Positives = 219/482 (45%), Gaps = 16/482 (3%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           YT + ++  + K   FD A + + +ME+  V  D+V ++ LI+   +  D   AI++   
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           + + G+ P +V +N+++    K + F +A+ +   M +  V PD  S++ L+  +    +
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             EA+  + EM +     D+ + + +I ++        A      M+ +G+ P  V Y  
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++  +  A    EA+ +   M       +VVTYNT++    K      A  L+ EM+ RG
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+  T++T+I  + + G  ++A  LF  L    +  D V Y ++I    R G +A A 
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L  ++      P     +IL       G++EEA     +    G + +I  +  +I+ +
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R+       +  +KM      PD      +++ Y K      A ++++ M++E  V  D
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE-MVQPD 576

Query: 471 QVHFQMLSLYGARKDFNMLES--LFERLDSDSNINKKEL-------HHVVAGIYERANRL 521
            V + M+ + G  +  NM E+  +F+++ + S I             HV AG  + A +L
Sbjct: 577 AVTYNMI-INGFSEQGNMEEAGRVFKKMGA-SGIEPDRYTYMSLINGHVTAGNSKEAFQL 634

Query: 522 ND 523
           +D
Sbjct: 635 HD 636



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 155/344 (45%), Gaps = 19/344 (5%)

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           R ++  +      P    +  L+  Y ++ K  EA   F  + +   P+  +  N ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 204 Y---GQLDMAKDADRLFWSMRKMGIDPSVVSY--NTLLRVYGEAELFGEAIHLFRLMQRK 258
               G   +A++A RL  S      D  V +Y  N ++  Y ++  F +A  +   M+++
Sbjct: 132 LSRAGWPHLAEEAYRLVLSS-----DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKR 186

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +VVT+N +I    ++ + + A  L+  M N+G++P  +T+++++    K  + D+A
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA 246

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             +F+ +    V  D   +  +I  + RVG V  A +   E++Q    P+ +     I +
Sbjct: 247 KEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            +  G+++ A    R+    G V D  ++  +I  F R    +  + V ++M   G  PD
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG-----CVFSDQVH 473
                 +LN   K      A++L +EM+E G     C F+  +H
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIH 410


>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
          Length = 728

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 237/519 (45%), Gaps = 6/519 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I+D + EE+  S  +  YN ++    +A  ++ A  L ++MR+  + PD  TYS +I   
Sbjct: 158 IMDTV-EESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGAC 216

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G    A+SW  +M++  +      ++ LI    K  D    + + + +K  G  PD 
Sbjct: 217 GRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMKKYGCKPDW 276

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              +  +  + +A L K+   ++  +R+ G   +T SY TLL++Y++ +   EAL +F  
Sbjct: 277 QTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLA 336

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +         C  +I  +   +M   A  +F  M+  G+ PS+ S  T++ VYG    
Sbjct: 337 MRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGD 396

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  LF  ++      ++  YN MI +Y +    E A  + + M+   + P+A TY +
Sbjct: 397 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 456

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++ +  K     +A  ++ +LR+S VE+D V+   ++    +   +    +L  E+    
Sbjct: 457 MLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVG 516

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P      ++     +AG  E A    + A   G    IS F  ++  +++ + + N+ 
Sbjct: 517 YVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKIS-FSTLVHAYAKKQDFPNME 575

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
               +M++AGY         +L++YGK  + E   D+ + M+  G       +  +++ Y
Sbjct: 576 AALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTY 635

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           G       +E+LF  +  +  +  +  ++ +   Y  A+
Sbjct: 636 GKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFAD 674



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 221/492 (44%), Gaps = 15/492 (3%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G   ++   S +   +G++G  + A   +  +E+  +S  LV Y+++I    K   Y KA
Sbjct: 131 GTLQEKRLISNVADTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKA 190

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +  +++   +VPD + Y+ MI   G+    KEA     EM+   +KP + +++TL++ 
Sbjct: 191 ARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISP 250

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +       + V  EM +  C  D  T +  +  Y +  + KD   +   +R  G    
Sbjct: 251 YGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEE 310

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
             SY TLL VY +  L  EA+ +F  M++  +        ++I  +  +   + A ++ +
Sbjct: 311 TGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFK 370

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EMQ  G+ P+  +  T+I ++G  G +  A  LF  LRSS   +D   Y  MI  Y R  
Sbjct: 371 EMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCD 430

Query: 349 LVAHAKRLLHELRQPNTIPRETAITILAR-------AGRIEEATWVFRQAFDAGEVK-DI 400
           +   A ++   + + + +P       + R         + EE  W  R +    +V+ D 
Sbjct: 431 MPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNS----DVELDE 486

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            +  C++   ++      + ++F++M   GY P +    ++++ YGK    E A      
Sbjct: 487 VMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKL 546

Query: 461 MQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            Q+ G   +D++ F  L   Y  ++DF  +E+    + +    +  E ++ +   Y +A 
Sbjct: 547 AQQFGS--ADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAG 604

Query: 520 RLNDASRIMNRM 531
           ++   S ++ RM
Sbjct: 605 QMEKVSDVLARM 616



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 180/424 (42%), Gaps = 76/424 (17%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+ E         +Y  +L   L+    + A  +F  MR+ G+AP  Y   +LI  F   
Sbjct: 307 WVEETG-------SYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDA 359

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
            MFD A S  ++M+   V+  L     +I +     D  +A  +F  L+SS    D+ AY
Sbjct: 360 EMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAY 419

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF----- 182
           N MINV+ +  + + A  + + M E  + PD  +Y ++L +  + +   +A  ++     
Sbjct: 420 NVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRN 479

Query: 183 --AEMNEVNCPLDLTTC----------------------------NIMIDVYGQLDMAK- 211
              E++EV C   L TC                            N+MID+YG+  M + 
Sbjct: 480 SDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPER 539

Query: 212 ------------DADRL---------------------FWSMRKMGIDPSVVSYNTLLRV 238
                        AD++                      W M+  G   S+ +YN++L  
Sbjct: 540 AHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDA 599

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG+A    +   +   M+   +  ++ +YN +I  YGK+    +   L + MQ  G+ P+
Sbjct: 600 YGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPD 659

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+TII  +G A   DRA   F+ ++ +G+  D V Y  ++  +ER G +  A R   
Sbjct: 660 RWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEAARWCL 719

Query: 359 ELRQ 362
            + Q
Sbjct: 720 RMSQ 723



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +FAYNV++   +R    E A  ++  M +  + PD YTY +++    K  +   A     
Sbjct: 416 IFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYW 475

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           ++    V  D V+ + ++    K     +   +F  +   G VP  + +N MI+++GKA 
Sbjct: 476 RLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAG 535

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           + + A   ++ + +Q    D +S+STL++ Y +   F    +   EM        L   N
Sbjct: 536 MPERAHKALK-LAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYN 594

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            ++D YG+    +    +   M   G+   + SYN L+  YG+  +  E   LFR MQ +
Sbjct: 595 SILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEE 654

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +  TYNT+I+ YG +   ++A    + MQ+ GI P+ +TY  +++ + +AG +D A
Sbjct: 655 GVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDEA 714

Query: 319 AMLFQKLRSSG 329
           A    ++  +G
Sbjct: 715 ARWCLRMSQAG 725



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 2/148 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  + A Y  S+ AYN +L    +A Q E    +   M   G+  D  +Y+ LI  +GK 
Sbjct: 579 WEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKN 638

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS-KAISIFSRLKSSGIVPDLVA 126
            M     +  + M+++ V  D   Y+ +I      +DY  +A+  F  ++ +GI PD V 
Sbjct: 639 YMIAEMETLFRTMQEEGVVPDRWTYNTIIR-TYGFADYPDRAVYWFKAMQDAGISPDRVT 697

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQG 154
           Y  +++ F +A    EA      M + G
Sbjct: 698 YMILVSTFERAGNIDEAARWCLRMSQAG 725


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 214/453 (47%), Gaps = 4/453 (0%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ +E  + P++   N +L   L+  + ++A  L+ EM +  I    YT++ +I    KE
Sbjct: 170 YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKE 229

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G    A  ++  ME   V  ++V Y+ +I        + +A  IF  +K  G+ PD   Y
Sbjct: 230 GKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTY 289

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N+ I+   K    +EA  LI +M E G+ P+ V+Y+ L++ Y       +A +   EM  
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                 L T N+ I          DAD +   MR+ G+ P  V++N L+  Y        
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L   M  K I+  +VTY ++I + GK    ++A  L  ++Q  G+ P+ I ++ +I 
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
                G +DRA  L +++ +  V  D + Y T++  Y R G V  A++LL E++    +P
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T I+  ++ G +++A  V  +    G    I  +  +I+   +N++  +  E+ 
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           ++M S G  PD      ++ +   + + E  DD
Sbjct: 590 KEMVSKGITPDDSTYLSIIEAMETVDDLEGNDD 622



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 226/472 (47%), Gaps = 20/472 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +   +++++R     K+   A   F  ++++G  P+  T + +++ F K  +  + ++W+
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLK--LNRTQMAWV 202

Query: 78  QQMEQDR--VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              E  R  +   L  ++ +I +  K     KA      +++ G+ P++V YNT+I+   
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               F+ AR++ + M+++G++PD  +Y++ ++   +  +  EA  +  +M E     +  
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 196 TCNIMIDVY---GQLDMA---KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           T N +ID Y   G LD A   +D       M   GI  S+V+YN  +         G+A 
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRD------EMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           ++ + M+ K +  + VT+N +I  Y +  + ++A  L+ EM  +GI+P  +TY+++I + 
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           GK  ++  A  LF K++  G+  D +++  +I  +   G +  A +LL E+     +P E
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 370 TAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                L     R G++EEA  +  +    G   D   +  +I  +S+     +   V ++
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           M + G+ P       ++    K +E E A++L  EM  +G    D  +  ++
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 7/412 (1%)

Query: 80  MEQDRVSGDLVLYSNLIELAR-KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           + +DRV     L  +L+  A  +L   ++A+  F  +K  G VP++   N M+++F K  
Sbjct: 136 LARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLN 195

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             + A +L  EM    ++    +++ ++N+  +  K  +A      M  +    ++ T N
Sbjct: 196 RTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYN 255

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I  +      + A  +F +M+  G++P   +YN+ +    +     EA  L   M   
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N VTYN +I  Y    + +KA     EM ++GI  + +TY+  I      G++  A
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA 375

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             + +++R  G+  D V +  +I  Y R G    A  LL E+     QP  +   + I +
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L +  R++EA  +F +    G + DI VF  +I+    N       ++ ++M +    PD
Sbjct: 436 LGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPD 495

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
                 ++  Y +  + E A  L  EM+  G +  D + +  ++S Y  R D
Sbjct: 496 EITYNTLMQGYCREGKVEEARQLLDEMKRRG-IKPDHISYNTLISGYSKRGD 546



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 181/408 (44%), Gaps = 31/408 (7%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           ++ ++  + + K   EA      ++E+G  P+  + + +L+L+++ ++   A  ++AEM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
            +N    L T NIMI+V  +    K A      M  +G+ P+VV+YNT++  +     F 
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A  +F+ M+ K +E +  TYN+ I    K    E+A+ L+ +M   G+ PNA+TY+ +I
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
             +   G LD+A     ++ S G+    V Y   I A    G +  A  ++ E+R+   +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           P      IL                               I  + R         + ++M
Sbjct: 389 PDAVTHNIL-------------------------------INGYCRCGDAKRAFGLLDEM 417

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              G  P       ++   GK    + AD L+S++Q+EG +    V   ++  + A  + 
Sbjct: 418 VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNI 477

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +    L + +D+   +  +  ++ +   Y R  ++ +A ++++ M +R
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRR 525


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 214/451 (47%), Gaps = 6/451 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  AYN V+    +      A  LF+EM QRGI+PD  TY+ ++    K    D A + 
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+QM    V  D   Y++LI        + +A+ +  ++ S GI+PD+V  N+++    K
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K+AR + + M  +G K D  SY  +LN Y      V+   +F  M       D   
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I  Y +  M   A  +F  MR+ G++P VV+Y+T++          +A+  F  M 
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  ++ TY+ +I+ +    +  KA +L+ +M N+G+ P+   ++ II    K G++ 
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  +F    S G+  + ++Y T++  Y  VG + +A R+   +     QPN +   T +
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGY 431
               + GRI+E   +FR+    G     +++  ++  LF   +     ++ F +M  +G 
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK-FHEMTESGI 632

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             D +  ++VL    K    + A  L+ E+ 
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELH 663



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 235/517 (45%), Gaps = 52/517 (10%)

Query: 7   DWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           D  NE  +   SP +  YN V+  + +A+  + A  +  +M  +G+ PD +TY++LI  +
Sbjct: 237 DLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNL---------IELARKLSD----------- 104
              G +  A+   ++M    +  D+V  ++L         I+ AR + D           
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356

Query: 105 YSKAI---------------SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           +S  I                +F+ + S GI PD   +N +I  + K  +   A ++  E
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VYGQ 206
           MREQGV+PD V+YST++       K  +A+  F +M +      ++T + +I     +G 
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           L  AKD   L   M   G+ P +  +N ++    +     +A ++F       +  NV+ 
Sbjct: 477 LLKAKD---LVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMV 533

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YNT++  Y    + E A  +   M + GI+PN + Y T++  + K G++D    LF+++ 
Sbjct: 534 YNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TIPRETAITILA---RAGRIE 382
             G++    LY  ++    + G    AK   HE+ +    + R T   +L    +    +
Sbjct: 594 HKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD 653

Query: 383 EATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           EA  +F++   A  VK DI+    MI    + ++     ++F  +  +G  P     +++
Sbjct: 654 EAILLFKE-LHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIM 712

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           + +  K    E ADD++S M+  GC   +Q + Q+L+
Sbjct: 713 MTNLIKEGLVEEADDMFSSMENAGC---EQPNSQLLN 746



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 204/453 (45%), Gaps = 7/453 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   N ++ ++ +  + + A  +FD M  +G   D ++Y  ++  +  +G        
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M  D ++ D  +++ LI+   K     +A  IF+ ++  G+ PD+V Y+T+I    +
Sbjct: 379 FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A     +M +QGV P   +Y  L+  +  +   ++A  +  +M       D+  
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC 498

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +L    DA  +F     +G+ P+V+ YNTL+  Y        A+ +F +M 
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+ NVV Y T++  Y K    ++  +L +E+ ++GI+P+   Y+ I+    +AG+  
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A + F ++  SG+ +D   Y  ++    +      A  L  EL   N     T + I+ 
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678

Query: 377 RAG-----RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            AG     R+EEA  +F     +G V  +  +  M+    +        ++F  M +AG 
Sbjct: 679 -AGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGC 737

Query: 432 -FPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             P+S ++  V+    + RE   A    S++ E
Sbjct: 738 EQPNSQLLNHVVRELLEKREIVRAGTYLSKIDE 770



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 201/477 (42%), Gaps = 55/477 (11%)

Query: 36  ELAHGLFDEM-RQRGIAPDRYTYSTLIT---------CFGKEGMFDSAISWLQQMEQDRV 85
           E AH LFDE+  Q    P R     L           C     +  +  + + +    RV
Sbjct: 44  EEAHDLFDELLHQATPVPGRQLNGFLAALARAPASAACRDGPALAVALFNRVSRAHGPRV 103

Query: 86  -SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA- 143
            S  L  Y  L++   +       ++ F ++  +G+  D +  + ++    +AK   EA 
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA---LSVFAEMNEVNCPLDLTTCNIM 200
            +L+  M   G  PD  SY  +L     + K  +A   L + AE   V  P  +    ++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
              + + D+ K  D LF  M + GI P + +YN ++    +A    +A  + R M  K +
Sbjct: 224 DGFFKEGDVNKACD-LFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL----- 315
             +  TYN++I  Y  + + ++A  + ++M ++GI P+ +T ++++A   K GK+     
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 316 --DRAAM----------------------------LFQKLRSSGVEIDPVLYQTMIVAYE 345
             D  AM                            LF  + S G+  D  ++  +I AY 
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 346 RVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G++  A  + +E+R    +P+ +   T I  L R G++++A   F Q  D G    IS
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            +  +I+ F  +       ++  +M + G  PD      ++N+  KL     A +++
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 1/331 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  I + + E+    P V  Y+ V+  + R  + + A   F++M  +G+AP   TY  L
Sbjct: 409 RATIIFNEMREQG-VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  F   G    A   + QM    +  D+  ++ +I    KL     A +IF    S G+
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+++ YNT+++ +      + A  + + M   G++P+ V Y TL+N Y +  +  E LS
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F E+         T  NI++    Q      A   F  M + GI     +Y+ +L    
Sbjct: 588 LFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLF 647

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     EAI LF+ +    ++ ++ T N MI    +    E+A +L   +   G+ P+ +
Sbjct: 648 KNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVV 707

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           TYS ++    K G ++ A  +F  + ++G E
Sbjct: 708 TYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738


>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
 gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
          Length = 384

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 185/376 (49%), Gaps = 8/376 (2%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVF--GKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           A S+F R+   G    +V Y  +I+ +   K+KL    RLL E M+E G KPD + Y+ L
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLL-EVMKESGKKPDEILYNCL 59

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +N  V + +   A  +  +M +     +L T   +I  Y      +D  +LF  M+  G 
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+  +YN L++ YG   LF EA+ L+  M      ++V TYN  I +YGK    E    
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+ EM  +G+ P+ +TY+T++ ++ K     +A  + +++  +G   +   Y  M+ +  
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           +   VA A +L   L+     PN +     +++  R G   EA  ++ +  +AG +  I 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +IE +  +  Y   +  F+ MR +G  PD+ I   ++++YGK      A+ LY EM
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359

Query: 462 QEEGCVFSDQVHFQML 477
            +EG V  D + + +L
Sbjct: 360 TKEGFV-PDGITYGIL 374



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 44/371 (11%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGL--FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +V  Y V++   LR K  +L H L   + M++ G  PD   Y+ L+      G  ++A  
Sbjct: 16  TVVTYTVIIHGYLRQKS-KLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEK 74

Query: 76  WLQQMEQDRVSGDLVLYSNLIEL---ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            L  M+QD+VS +LV Y+NLI+    A +L D  K   +F  +K  G  P+   YN +I 
Sbjct: 75  ILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRK---LFQEMKDKGESPNSWTYNALIQ 131

Query: 133 VFGKAKLFKEA-----------------------------------RLLIEEMREQGVKP 157
            +G+  LFKEA                                     L++EM  +GV P
Sbjct: 132 GYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPP 191

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D V+Y+TLL++Y +   FV+A  +  EM E     ++ T NIM+    +     +A +LF
Sbjct: 192 DQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLF 251

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            +++  G+ P++V+Y+ +L +YG   L+ EA  L+  M        ++ Y+ +I+ YG  
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
             +++A    Q+M+  GI P+   Y+ ++  +GKAG+   A +L+ ++   G   D + Y
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371

Query: 338 QTMIVAYERVG 348
             ++ A+   G
Sbjct: 372 GILVRAFANAG 382



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 160/311 (51%), Gaps = 1/311 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD + ++ + S ++  Y  +++    A + +    LF EM+ +G +P+ +TY+ LI  +
Sbjct: 75  ILDDMKQD-KVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY 133

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G++G+F  A+    +M+    + D+  Y+  I +  K         +   + + G+ PD 
Sbjct: 134 GRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQ 193

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YNT+++V+ K   F +A  ++ EM E G +P+  +Y+ +L+   +     EA  +F  
Sbjct: 194 VTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFEN 253

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +       ++ T + M+ +YG+  +  +A +L+  M + G  P +++Y+ L+  YG   +
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGM 313

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + EA+  F+ M++  I  +   Y  ++  YGK+    +A  L  EM   G  P+ ITY  
Sbjct: 314 YQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGI 373

Query: 305 IIAIWGKAGKL 315
           ++  +  AG+L
Sbjct: 374 LVRAFANAGRL 384



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 161/361 (44%), Gaps = 5/361 (1%)

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVY-GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           A S+F  M +  C   + T  ++I  Y  Q      A RL   M++ G  P  + YN L+
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                +     A  +   M++ ++  N+VTY  +IK Y  +   +    L QEM+++G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGES 120

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN+ TY+ +I  +G+ G    A  L+ ++   G   D   Y   I  Y + GL+   +RL
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           L E+      P+ +   T + + A+     +A  + R+  +AG   +I  +  M+    +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
            +  A   ++FE ++S G  P+    + +L+ YG+   +  A  L+ EM E GC+     
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +  ++  YG    +    + F+ +     +   +++  +   Y +A R  +A  +   M 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360

Query: 533 K 533
           K
Sbjct: 361 K 361


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 240/506 (47%), Gaps = 19/506 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++AIL  + +     P+V  YN ++  + +  + + A  LF+ M+    +P   TY+TL
Sbjct: 97  QALAILHEMRDHG-CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTL 155

Query: 61  ITCFGKEGMFDSAISWLQQM-------EQDRVSGDLVLYSNLIELARKLSDYSKAISIFS 113
           +    + G  + A++  Q+M         DR S +++ YS LI+   K +  S+A+ +  
Sbjct: 156 LDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 215

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
            +K+ G  PD++ Y  +++   K      A  ++ EM + G  P+ V+Y++LL+      
Sbjct: 216 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 275

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +AL++  +M    C  ++ T   +ID   ++   KDA  +   M   G  P ++ YN
Sbjct: 276 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 335

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            L+    +A+   E+I L R      I+ +VVTY+++I    +S   ++A  L+  +++R
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  P+ I YST+I    KAGK+D A  L++ +   G + D V Y T+I    + G V  A
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455

Query: 354 KRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             LL  +      P+T+   + I  L     ++EA  +  +   +        +  +I  
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515

Query: 410 FSRNKKYANVIEVFEKMR-----SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
             R ++  + + + E+ +     + G   D+   + +++   K      A D + EM + 
Sbjct: 516 MCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLE 490
           G V  D + + +L L G +K  ++ E
Sbjct: 576 G-VIPDHITYSIL-LEGLKKSKDLHE 599



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 196/457 (42%), Gaps = 38/457 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+ Y  +LR   R  + + A   FDEMR + + P+ +  S LI    K      A+  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M+   +  D V+Y+ L+    K     +A++I   ++  G  P++V YN++I+   K
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-------NEVN 189
                 A+ L E M+     P  V+Y+TLL+      K   A+++F EM        +  
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T +++ID   + +    A  L  SM+  G  P V++Y  L+    +      A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            + R M       N+VTYN+++    ++     A  LM++M  RG  PN +TY T+I   
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K G++  A  +   +   G   D ++Y  +I                            
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLING-------------------------- 340

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                L +A +++E+  + R+A   G   D+  +  +I    R+ +      +   ++S 
Sbjct: 341 -----LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           G  PD  + + +++   K  + + A DLY  M  +GC
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 205/431 (47%), Gaps = 16/431 (3%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP+V  Y+V++  + +A +   A  L + M+ RG +PD  TY+ L+    KE    +A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              L++M       +LV Y++L+     AR++SD   A+++   +   G  P++V Y T+
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD---ALALMRDMTCRGCTPNVVTYGTL 302

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    K+A  ++ +M ++G  PD + Y+ L+N   +  +  E++++         
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + +I    + +   +A RL   ++  G  P V+ Y+TL+    +A    EA  
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+ +M     + +VVTY+T+I    K+   ++A  L+  M   G  P+ +TY+++I    
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP------- 363
               LD A  L +++  S      V Y  +I    R+  V  A  LL + +         
Sbjct: 483 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGT 542

Query: 364 --NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             +TI   + I  L +AGR+ EA   F++  D G + D   +  ++E   ++K    +  
Sbjct: 543 ALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH 602

Query: 422 -VFEKMRSAGY 431
            V ++M   GY
Sbjct: 603 LVLDQMVQLGY 613



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 183/387 (47%), Gaps = 15/387 (3%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            +PD  +Y+ LL  +    +  +A   F EM   N   ++  C+I+ID   +   + DA 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           R F +M+  GI    V Y  LL    + +   +A+ +   M+    E NVVTYN++I   
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL---RSSGVE 331
            K+ E ++A  L + M++    P+ +TY+T++    + GKL+RA  LFQ++   RS  ++
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 332 --IDP--VLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
               P  + Y  +I    +   V+ A  LL  ++     P+ I     +  L +  ++  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  V R+  DAG V ++  +  ++    R ++ ++ + +   M   G  P+      +++
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
              K+   + A  + ++M ++G    D + + ML + G  K   + ES+     + S   
Sbjct: 305 GLCKVGRVKDACAMLADMIDKG-GTPDLMIYNML-INGLCKADQVDESIALLRRAVSGGI 362

Query: 504 KKELHHVVAGIYE--RANRLNDASRIM 528
           K ++    + IY   R+NRL++A R++
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLL 389


>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 179/369 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +L+  +R    + A  +  EM + G+ PD  TYS LI  +   G ++SA   
Sbjct: 309 PRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIV 368

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME   V  +  ++S ++   R   ++ K+  +   +KSSG+ PD   YN MI+ FGK
Sbjct: 369 LKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGK 428

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    E M  +G+ PD V+++TL++ + ++ +   A  +F+EM +      +TT
Sbjct: 429 YNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITT 488

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI+  G+    +        M+  G+ P+ ++Y TL+ VYG++  F +AI    +++
Sbjct: 489 YNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLK 548

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               +     YN +I  Y +    E A N  + M   G+ P+ +  +++I  +G+  +  
Sbjct: 549 STGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDA 608

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  + Q ++ + +E D V Y T++ A  RV        +  E+      P   A  +L 
Sbjct: 609 EAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLR 668

Query: 377 RAGRIEEAT 385
            A R  + T
Sbjct: 669 SALRYMKQT 677



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 205/491 (41%), Gaps = 41/491 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI--S 75
           +   YN ++    R    E A  L  +MR+ G  PD   YS++I    +    DS I   
Sbjct: 168 TPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQK 227

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              ++E D++  D  L +++I    K  D ++A+   +  +S+G+ P       +I   G
Sbjct: 228 LYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALG 287

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    EA  L EE+RE G++P T +Y+ LL  YV      +A  V +EM +     D  
Sbjct: 288 NSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQ 347

Query: 196 TCNIMIDVYGQLD---------------------------MAKDADRLFWS--------M 220
           T +++IDVY                               +A   D+  W         M
Sbjct: 348 TYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDM 407

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G+ P    YN ++  +G+      A+  F  M  + I  ++VT+NT+I  + KS  H
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRH 467

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  L  EMQ RG  P   TY+ +I   G+  + ++      K++S G++ + + Y T+
Sbjct: 468 DMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTL 527

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           +  Y + G  + A   L  L+     P  T     I   A+ G  E A   FR     G 
Sbjct: 528 VDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGL 587

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              +     +I  F  +++ A    V + M+     PD      ++ +  ++ +F+    
Sbjct: 588 TPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPA 647

Query: 457 LYSEMQEEGCV 467
           +Y EM   GC 
Sbjct: 648 VYEEMVASGCT 658



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 198/400 (49%), Gaps = 4/400 (1%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           +  G+ P   T   +I   G  G    A +  +++ ++ +      Y+ L++   +    
Sbjct: 268 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSL 327

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
             A  + S ++ +G+ PD   Y+ +I+V+  A  ++ AR++++EM    V+P++  +S +
Sbjct: 328 KDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRI 387

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L  Y +  ++ ++  V  +M       D    N+MID +G+ +    A   F  M   GI
Sbjct: 388 LANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGI 447

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P +V++NTL+  + ++     A  LF  MQ++     + TYN MI   G+    E+ T 
Sbjct: 448 PPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTA 507

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
            + +MQ++G++PN+ITY+T++ ++GK+G+   A    + L+S+G +    +Y  +I AY 
Sbjct: 508 FLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYA 567

Query: 346 RVG---LVAHAKRLL-HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G   L  +A RL+  E   P+ +   + I       R  EA  V +   +     D+ 
Sbjct: 568 QRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVV 627

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +  +++   R +K+  V  V+E+M ++G  PD    A++
Sbjct: 628 TYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAML 667



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 197/434 (45%), Gaps = 13/434 (2%)

Query: 57  YSTLITCFGK-EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           YS LI   G+ E ++++ +     + Q +V   L  Y+ LI    +  D  KA+++ S++
Sbjct: 142 YSILINALGRSEKLYEAFL-----LSQRQVLTPLT-YNALIGACARNGDVEKALNLMSKM 195

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVENH 173
           +  G  PD V Y+++I    ++       L  L  E+    ++ D    + ++  + +  
Sbjct: 196 RRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAG 255

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               A+   A           +T   +I   G      +A+ LF  +R+ G++P   +YN
Sbjct: 256 DPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYN 315

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            LL+ Y       +A  +   M++  ++ +  TY+ +I +Y  +   E A  +++EM+  
Sbjct: 316 ALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEAS 375

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            ++PN+  +S I+A +   G+  ++  + + ++SSGV+ D   Y  MI  + +   + HA
Sbjct: 376 NVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHA 435

Query: 354 ----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
               +R+L E   P+ +   T I    ++GR + A  +F +    G    I+ +  MI  
Sbjct: 436 MATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINS 495

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
               +++  V     KM+S G  P+S     +++ YGK   F  A +    ++  G   +
Sbjct: 496 MGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPT 555

Query: 470 DQVHFQMLSLYGAR 483
             ++  +++ Y  R
Sbjct: 556 STMYNALINAYAQR 569



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/422 (21%), Positives = 191/422 (45%), Gaps = 13/422 (3%)

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           + +SWLQ+   +      +LYS LI     L    K    F   +   + P  + YN +I
Sbjct: 124 AVVSWLQK--HNLCFSYELLYSILIN---ALGRSEKLYEAFLLSQRQVLTP--LTYNALI 176

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL--SVFAEMNEVN 189
               +    ++A  L+ +MR  G +PD V+YS+++     ++K    +   ++AE+    
Sbjct: 177 GACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDK 236

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             +D    N +I  + +      A R     +  G++P   +   ++   G +    EA 
Sbjct: 237 IEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAE 296

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  ++   +E     YN ++K Y ++   + A  ++ EM+  G++P+  TYS +I ++
Sbjct: 297 ALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVY 356

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
             AG+ + A ++ +++ +S V+ +  ++  ++  Y   G    + ++L +++    QP+ 
Sbjct: 357 AHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDR 416

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 I    +   ++ A   F +    G   DI  +  +I+   ++ ++    E+F +
Sbjct: 417 HFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSE 476

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+  GY P      +++NS G+ + +E      S+MQ +G   +   +  ++ +YG    
Sbjct: 477 MQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGR 536

Query: 486 FN 487
           F+
Sbjct: 537 FS 538



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 152/344 (44%), Gaps = 46/344 (13%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L QR+ +    +TYN +I    ++ + EKA NLM +M+
Sbjct: 142 YSILINALGRSEKLYEA---FLLSQRQVL--TPLTYNALIGACARNGDVEKALNLMSKMR 196

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVG- 348
             G +P+ + YS+II    ++ K+D   +  L+ ++ +  +EID  L   +IV + + G 
Sbjct: 197 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGD 256

Query: 349 ----------------------LVA------------HAKRLLHELRQPNTIPRETAITI 374
                                 LVA             A+ L  E+R+    PR  A   
Sbjct: 257 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNA 316

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     R G +++A +V  +   AG   D   +  +I++++   ++ +   V ++M ++ 
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN 376

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             P+S++ + +L +Y    E++ +  +  +M+  G       +  M+  +G     +   
Sbjct: 377 VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAM 436

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           + FER+ S+         + +   + ++ R + A  + + M +R
Sbjct: 437 ATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQR 480


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 237/496 (47%), Gaps = 10/496 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  P+V  ++ +   + + KQ++L   L  +M  +GIA + YT S +I CF +      
Sbjct: 180 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 239

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S + ++ +     + + +S LI         S+A+ +  R+   G  PDL+  NT++N
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               +    EA LLI++M E G +P+ V+Y  +LN+  ++ +   A+ +  +M E N  L
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359

Query: 193 DLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D    +I+ID    +G LD   +A  LF  M   GI  ++++YN L+  +  A  + +  
Sbjct: 360 DAVKYSIIIDGLCKHGSLD---NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L R M +++I  NVVT++ +I  + K  +  +A  L +EM +RGI P+ ITY+++I  +
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            K   LD+A  +   + S G + +   +  +I  Y +   +     L  ++       +T
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I      G++  A  +F++        +I  +  +++    N +    +E+FEK
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           +  +    D  I  ++++      + + A DL+  +  +G     + +  M+     +  
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 656

Query: 486 FNMLESLFERLDSDSN 501
            +  E LF +++ D +
Sbjct: 657 LSEAELLFRKMEEDGH 672



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 207/436 (47%), Gaps = 4/436 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P +   N ++  +  + +   A  L D+M + G  P+  TY  ++    K G   
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L++ME+  +  D V YS +I+   K      A ++F+ ++  GI  +++ YN +I
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F  A  + +   L+ +M ++ + P+ V++S L++ +V+  K  EA  +  EM      
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   +ID + + +    A+++   M   G DP++ ++N L+  Y +A    + + L
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  + VTYNT+I+ + +  +   A  L QEM +R + PN +TY  ++     
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+ ++A  +F+K+  S +E+D  +Y  +I        V  A  L   L     +P    
Sbjct: 584 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 643

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G + EA  +FR+  + G   D   +  +I     +      +++ E+++
Sbjct: 644 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703

Query: 428 SAGYFPDSHIIALVLN 443
             G+  D+  I +V++
Sbjct: 704 RCGFSVDASTIKMVID 719



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 173/355 (48%), Gaps = 6/355 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE         Y++++  + +    + A  LF+EM  +GI  +  TY+ LI  F   G +
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L+ M + +++ ++V +S LI+   K     +A  +   +   GI PD + Y ++
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K     +A  +++ M  +G  P+  +++ L+N Y + ++  + L +F +M+    
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
             D  T N +I  + +L     A  LF  M    + P++V+Y  LL      GE+E   +
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE---K 589

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  +++ ++E ++  YN +I     + + + A +L   +  +G++P   TY+ +I 
Sbjct: 590 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
              K G L  A +LF+K+   G   D   Y  +I A+   G    + +L+ EL++
Sbjct: 650 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 704



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 85/183 (46%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN +++      +  +A  LF EM  R + P+  TY  L+      G  + A+   +++
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+ ++  D+ +Y+ +I      S    A  +F  L   G+ P +  YN MI    K    
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA LL  +M E G  PD  +Y+ L+  ++ +    +++ +  E+      +D +T  ++
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 201 IDV 203
           ID+
Sbjct: 718 IDM 720



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 5/173 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+++    +  YN+++  +  A + + A  LF  +  +G+ P   TY+ +I    K+G  
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    ++ME+D  + D   Y+ LI       D +K++ +   LK  G   D      +
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 131 INVFG--KAKLFKEARLLIEEMR--EQGVKP-DTVSYSTLLNLYVENHKFVEA 178
           I++    KA  F +     +      Q  KP D+ ++  LL L      FV  
Sbjct: 718 IDMLSDDKANYFSKYHNCSKSTSFWNQPEKPSDSWNWKCLLRLRCLAENFVRC 770


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 226/473 (47%), Gaps = 10/473 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L  + +  +   A  L  +M+ +G+ P+R T++ L+    + G    A + 
Sbjct: 230 PDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANV 289

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ M Q+ V  D   Y+ +I    K    ++A+ +   +++  + PD+V YNT+IN   +
Sbjct: 290 IELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFE 349

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +E   LIEEM  +G+KP++V+Y+ ++  +V+  K  E      +M E  C  D+ T
Sbjct: 350 HGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVT 409

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I  + ++    +A RL   M + G+    V+ NT+LR         EA  L    +
Sbjct: 410 YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R+    + V+Y T+I  Y K  +  +A  L  EM+ + I P+ ITY+++IA   + GK +
Sbjct: 470 RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAI 372
           +A     +L  SG+  D + Y T+I  Y + G V  A     +++ +  +P+ +   T +
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +E+A  +F      G+  D   +  +I    + K++    ++ E+M      
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           PD +    +L         + A++  S++ E+G     +   Q L L G R+D
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG-----KSENQFLEL-GKRQD 696



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 241/531 (45%), Gaps = 19/531 (3%)

Query: 17  PSVFAYNVVLRNVLR---AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           P++   N +L  ++R   +    L+  +F +  + G+  +  +++ LI     E  F  A
Sbjct: 157 PTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEA 216

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  L +M       D + Y+ +++   K    ++A  +   +K+ G+ P+   +N ++  
Sbjct: 217 IRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVG 276

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +    KEA  +IE M +  V PD  +Y+ +++ + +  +  EA+ +  EM  +    D
Sbjct: 277 CCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPD 336

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I+   +   +++  +L   M   G+ P+ V+YN +++ + +     E     R
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+      ++VTYNT+I  + K  + ++A  LM EM  +G++ + +T +T++    +  
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
           KLD A  L    R  G  +D V Y T+I+ Y +    + A RL  E+++   IP      
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + G+  +A     +  ++G V D   +  +I  + +  +     +   KM   
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ--MLSLYGARK--- 484
            + PD      +L    K    E A  L++    +G    D V +   +LSL   ++   
Sbjct: 577 NFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG-KDVDAVSYNTIILSLCKEKRFGE 635

Query: 485 DFNMLESLFE-RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            F++LE + E +L  D        ++ + G    A R+ DA   ++++ ++
Sbjct: 636 AFDLLEEMEEKKLGPDCYT-----YNAILGGLTDAGRMKDAEEFISKIAEK 681



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 157/352 (44%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  + SP V  YN ++         E    L +EM  RG+ P+  TY+ ++  F K+G  
Sbjct: 329 ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKM 388

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     +++ME+     D+V Y+ LI    K+    +A  +   +   G+  D V  NTM
Sbjct: 389 DEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTM 448

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    + +   EA  L+   R +G   D VSY TL+  Y ++ K  +AL ++ EM E   
Sbjct: 449 LRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEI 508

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T N MI    Q+     A      + + G+ P  ++YNT++  Y +     +A  
Sbjct: 509 IPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQ 568

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M  K  + +VVT NT++    K    EKA  L     ++G + +A++Y+TII    
Sbjct: 569 FHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLC 628

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           K  +   A  L +++    +  D   Y  ++      G +  A+  + ++ +
Sbjct: 629 KEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 194/413 (46%), Gaps = 43/413 (10%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINV---FGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           +A  IF+R+K  G+ P L+  NT++N    F  +   + ++ +  +  + GVK +T S++
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKD-------- 212
            L++     ++F EA+ V  +M +  CP D  T N ++D     G+L+ A+D        
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNK 261

Query: 213 ---------------ADRLFW---------SMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                            RL W          M +  + P   +YN ++  + +     EA
Sbjct: 262 GLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEA 321

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + L   M+  ++  +VVTYNT+I    +    E+   L++EM+ RG++PN++TY+ ++  
Sbjct: 322 MRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKW 381

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----N 364
           + K GK+D      +K+  SG   D V Y T+I  + +VG +  A RL+ E+ +     +
Sbjct: 382 FVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMD 441

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   T +  L R  +++EA  +   A   G   D   +G +I  + +++K +  + +++
Sbjct: 442 DVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWD 501

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +M+     P       ++    ++ +   A D   E+ E G V  D++ +  +
Sbjct: 502 EMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV-PDEITYNTI 553


>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
          Length = 579

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 206/432 (47%), Gaps = 27/432 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + Y  +++  LR+++      +++EMR++G   D + Y+ L+    K GM D A    
Sbjct: 127 SGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVF 186

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+Q     D   Y+ LI ++ K    SK +S F  + S G V +L+A+NT+I   GK 
Sbjct: 187 EDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKN 246

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K+  +   ++ +M E   +P+  +YS  L++          L+   +++ +N  LD+ + 
Sbjct: 247 KMVDKVIFVLSKMVENDCQPNQFTYSITLDI----------LATEGQLHRLNEVLDICSR 296

Query: 198 NIMIDVYGQL-------DMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            +   +Y  L         A +A  +F   W+  + G   + VS   +L V   AE   E
Sbjct: 297 FMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVS---MLEVLCNAEKTLE 353

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI L  +M  K I  +V  YN +    GK  +    +NL  +M+  GI P+  TY+ +I+
Sbjct: 354 AIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMIS 413

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            +G+ G +D+A+ LF+ + +S  + D V Y ++I    + G +  A  L  E+++    P
Sbjct: 414 SYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDP 473

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +       I    ++ ++E A  +F +    G   +I  +  +++   R  K     +++
Sbjct: 474 DVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLY 533

Query: 424 EKMRSAGYFPDS 435
           E M+  G  PDS
Sbjct: 534 ETMKQQGLIPDS 545



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 35/404 (8%)

Query: 9   INEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           + EE R   Y   +FAYN++L  + +A   + A  +F++M+Q+   PD YTY+ LI   G
Sbjct: 150 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSG 209

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G     +S+  +M       +L+ ++ +IE   K     K I + S++  +   P+  
Sbjct: 210 KAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQF 269

Query: 126 AYNTMINVFG--------------------------------KAKLFKEARLLIEEMREQ 153
            Y+  +++                                  K+    EA  +   M   
Sbjct: 270 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 329

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
             K D  ++ ++L +     K +EA+ +   M E     D+   N++    G+L      
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M+  GI P V +YN ++  YG   L  +A  LF +M+    + +VVTYN++I  
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 449

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK  + ++A  L +EMQ +G +P+  TYS +I  +GK+ K++ A  LF ++ S G   +
Sbjct: 450 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            V Y  ++   ER G    A +L   ++Q   IP     +IL R
Sbjct: 510 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILER 553



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 35/220 (15%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN+V   + + KQ      LFD+M+  GI PD +TY+ +I+ +G+ G+ D       
Sbjct: 370 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD------- 422

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
                                       KA  +F  +++S   PD+V YN++IN  GK  
Sbjct: 423 ----------------------------KASELFEVMEASSCKPDVVTYNSLINCLGKHG 454

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA +L +EM+E+G  PD  +YS L+  + +++K   A S+F EM    C  ++ T N
Sbjct: 455 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 514

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           I++D   +    ++A +L+ +M++ G+ P  ++Y+ L R+
Sbjct: 515 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERL 554



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 129/256 (50%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++++ ++     AH +F  M       DR  + +++           AI  L  M 
Sbjct: 303 YSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMP 362

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+ +Y+ +     KL   S   ++F ++K++GI+PD+  YN MI+ +G+  L  
Sbjct: 363 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 422

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L E M     KPD V+Y++L+N   ++    EA  +F EM E     D+ T +I+I
Sbjct: 423 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 482

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +  + A  LF  M   G  P++V+YN LL          EA  L+  M+++ + 
Sbjct: 483 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 542

Query: 262 QNVVTYNTMIKIYGKS 277
            + +TY+ + ++  +S
Sbjct: 543 PDSITYSILERLESRS 558



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/382 (19%), Positives = 170/382 (44%), Gaps = 7/382 (1%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G++    +Y  ++  ++ + +  +   V+ EM      LD+   N+++D   +  M   A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            ++F  M++    P   +Y  L+R+ G+A    + +  F  M  K    N++ +NT+I+ 
Sbjct: 183 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 242

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK+   +K   ++ +M     +PN  TYS  + I    G+L R   L + L      ++
Sbjct: 243 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR---LNEVLDICSRFMN 299

Query: 334 PVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +Y  ++ +  + G  + A     R+ +   + +     + + +L  A +  EA  +  
Sbjct: 300 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              + G V D+ ++  +     + K+ + +  +F+KM++ G  PD     ++++SYG++ 
Sbjct: 360 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 419

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + A +L+  M+   C      +  +++  G   D +    LF+ +           + 
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           ++   + ++N++  A  + + M
Sbjct: 480 ILIECFGKSNKVEMACSLFDEM 501


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 224/496 (45%), Gaps = 41/496 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF +N+V+  + +  +   A  LF  M++ G  PD  T+++LI  +GK G  D    
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M +     D+V Y+ LI    K      A   F+ +K  G++ ++V ++T ++ F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L  +MR +G+  +  +Y+ L++   +  +  +A+ +  EM     PL++ 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  +++D   +     +A+ +   M K G+  + + Y TL+  +   +   +A+ L   M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +E ++  Y  +I+      + ++A +L+ +M   G+EPN I Y+T++    K+GK+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  + QK+  SG + + + Y  +I    + G +  A    +++R     PN       
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 372 ITILARAGRIEEATWVFRQ----------------------------AF-------DAGE 396
           +  L + G + EA  +F +                            AF       D+G 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  + C I  F          EVF +M   G  PD  +   +++ Y KL   E A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS 664

Query: 457 LYSEMQE--EGCVFSD 470
           L  EM+     C  SD
Sbjct: 665 LQDEMERVLPSCTDSD 680



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 168/354 (47%), Gaps = 2/354 (0%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F Y  ++    +A + + A  L DEM ++G+  +  TY+ L+    KE     A   L+ 
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME+  V  + +LY+ LI       +  KA+ + S +K+ G+  D+  Y  +I        
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA+ L+ +M E G++P+ + Y+T+++   ++ K  EA+++  ++ +     ++ T   
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID   +     +A   F  MR +G+DP+V +Y  L+    +     EA+ LF  M  K 
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  + V Y  ++  Y K      A  L  +M + G++ +   Y+  I+ +     +  A 
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--PNTIPRETA 371
            +F ++   G+  D  +Y  +I  Y+++G +  A  L  E+ +  P+    +TA
Sbjct: 629 EVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTA 682



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 7/312 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+  + EQ   P+  +++ +++   +  +  EA S+F+ M E+ C  D+ T N +ID YG
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     + ++L   MR+ G    VV+YN L+  + +      A   F  M+R+ +  NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++T +  + K     +A  L  +M+ RG+  N  TY+ +I    KAG+LD A +L  ++
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI---- 381
              GV ++ V Y  ++    +   VA A+ +L  + +      E   T L     +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+A  +  +  + G   DIS++G +I+      K      +  KM  +G  P+  I   +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 442 LNSY---GKLRE 450
           +++    GK+ E
Sbjct: 475 MDACFKSGKVPE 486



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 155/324 (47%), Gaps = 17/324 (5%)

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD-ADRLFWSMRK 222
           TLL++  +     +A+   A + E+  P +  TCN ++     L +A+D + RL   + +
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL-----LRLARDRSGRLVRRLFE 181

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+V ++N ++    +     EA  LF  M+      +VVT+N++I  YGK  E ++
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
              L++EM+  G + + +TY+ +I  + K G+++ A   F  ++  GV  + V + T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ + GLV  A +L  ++R       E   T L     +AGR+++A  +  +    G   
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           ++  +  +++   + +K A   +V   M  AG   +  +   +++ +   +  E A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGA 482
           SEM+ +G           +SLYGA
Sbjct: 422 SEMKNKGLELD-------ISLYGA 438



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+A    +   Y  ++      K  E A GL  EM+ +G+  D   Y  LI         
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S L +M++  +  + ++Y+ +++   K     +AI++  ++  SG  P+++ Y  +
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA    EA     +MR+ G+ P+  +Y+ L++   +N    EA+ +F EM     
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGM 569

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD      ++D Y +     DA  L   M   G+   +  Y   +  +    +  EA  
Sbjct: 570 SLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEARE 629

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           +F  M    I  +   YN +I  Y K    E+A +L  EM+
Sbjct: 630 VFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L  I +   + P+V  Y  ++  + +A   + A   F++MR  G+ P+   Y+ L+
Sbjct: 487 AIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  + A+    +M    +S D V+Y+ L++   K  +   A ++ +++  SG+ 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            DL  Y   I+ F    +  EAR +  EM   G+ PD   Y+ L++ Y +     EA+S+
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 182 FAEMNEV 188
             EM  V
Sbjct: 666 QDEMERV 672



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 8/237 (3%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +TLL V  +  L  +A+     ++   +  N  T N ++      L  +++  L++ +  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILL----RLARDRSGRLVRRLFE 181

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           +   PN  T++ +I    K G+L  A  LF +++  G   D V + ++I  Y + G +  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            ++L+ E+R    + + +     I    + GR+E A   F      G + ++  F   ++
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            F +       +++F +MR  G   +      +++   K    + A  L  EM  +G
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 12/156 (7%)

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L RAA+     RS+   +      T++      GL+  A R +  +R+    PNT    T
Sbjct: 107 LHRAALALGPRRSALASV----VDTLLSVLADRGLLDDAVRAVARVRELRVPPNT---RT 159

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
              IL R  R + +  + R+ F+     ++  F  +I+   +  + A    +F +M+  G
Sbjct: 160 CNHILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             PD      +++ YGK  E +  + L  EM+  GC
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 242/505 (47%), Gaps = 28/505 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  ++ +L  +    +   A  LF +M +    P+  T++TL+    +EG    A+
Sbjct: 144 FHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAV 199

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIVPDLVAY-----N 128
           + L +M +D +  + + Y  +++   K+ D   A+++  +++  S I P++V +      
Sbjct: 200 ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRT 259

Query: 129 TMINVFGKAKLFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            MIN F  +  + EA+ L++EM E + + PD V+Y+ L+N +V+  KF EA  ++ EM  
Sbjct: 260 CMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 319

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                   T + MID + + +    A+ +F+ M   G  P ++++NTL+  Y  A+   +
Sbjct: 320 RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDD 379

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            I L   M    +  N +TY T+I  + +  +   A +L+QEM + G+ PN +T +T++ 
Sbjct: 380 GIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLD 439

Query: 308 IWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLYQTMIVAYERVGLVAHAKRL 356
                GKL  A  +F+ ++ S           GVE D   Y  +I      G    A+ L
Sbjct: 440 GLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 499

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             E+      P+TI   + I  L +  R++EAT +F          ++  F  +I  + +
Sbjct: 500 YEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 559

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
             +  + +E+F +M   G   ++     +++ + K+     A D++ EM   G V+ D +
Sbjct: 560 AGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG-VYPDTI 618

Query: 473 HFQ-MLSLYGARKDFNMLESLFERL 496
             + ML+   ++++     ++ E L
Sbjct: 619 TIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 15/352 (4%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  + E  + SP V  YN ++   ++  ++  A  L+DEM  RGI P   TYS++I  F
Sbjct: 277 LLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGF 336

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K+   D+A      M     S D++ ++ LI    +       I +   +  +G+V + 
Sbjct: 337 CKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 396

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + Y T+I+ F +      A+ L++EM   GV P+ V+ +TLL+   +N K  +AL +F  
Sbjct: 397 ITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 456

Query: 185 MN------EVNCPL-----DLTTCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVS 231
           M       + + P      D+ T NI+I   G ++  K  +A+ L+  M   GI P  ++
Sbjct: 457 MQKSKMDIDASHPFNGVEPDVQTYNILIS--GLINEGKFLEAEELYEEMPHRGIVPDTIT 514

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN+++    +     EA  +F  M  K    NVVT+ T+I  Y K+   +    L  EM 
Sbjct: 515 YNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 574

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            RGI  NAITY T+I  + K G ++ A  +FQ++ +SGV  D +  + M+  
Sbjct: 575 RRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTG 626



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 241/527 (45%), Gaps = 32/527 (6%)

Query: 33  KQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLY 92
           K  E A  LF +M +    P    +  L+    + G  D  IS  ++ME  RV  +   +
Sbjct: 57  KGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSF 116

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           + L++     S    A+S F ++   G  P +V ++T+++         EA  L  +M  
Sbjct: 117 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM-- 174

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
              KP+ V+++TL+N      + VEA+++   M E     +  T   ++D   ++     
Sbjct: 175 --CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 232

Query: 213 ADRLFWSMRKMG-IDPSVVSY-----NTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVV 265
           A  L   M ++  I P+VV +       ++  +  +  + EA  L + +++RK+I  +VV
Sbjct: 233 ALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVV 292

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TYN +I  + K  +  +A  L  EM  RGI P+ ITYS++I  + K  +LD A  +F  +
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
            + G   D + + T+I  Y R   V    +LLHE+ +     NTI   T I    + G +
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-----------G 430
             A  + ++   +G   ++     +++    N K  + +E+F+ M+ +           G
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD     ++++      +F  A++LY EM   G +  D + +  + ++G  K   + E
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYNSV-IHGLCKQSRLDE 530

Query: 491 S--LFERLDSDS-NINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +  +F+ + S S + N      ++ G Y +A R++D   +   M +R
Sbjct: 531 ATQMFDSMGSKSFSPNVVTFTTLING-YCKAGRVDDGLELFCEMGRR 576



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 222/473 (46%), Gaps = 30/473 (6%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  PSV  +  ++  V+R  + ++   L  +M  R +  + Y+++ L+ CF        
Sbjct: 72  SRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPF 131

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+S   ++ +      +V +S L+         S+A+ +F ++      P++V + T++N
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMN 187

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--- 189
              +     EA  L++ M E G++P+ ++Y T+++   +    V AL++  +M EV+   
Sbjct: 188 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK 247

Query: 190 -----CPLDLTTCNIMIDVYGQLDMAKDADRLFWSM-RKMGIDPSVVSYNTLLRVYGEAE 243
                 PL+  TC  MI+ +       +A +L   M  +  I P VV+YN L+  + +  
Sbjct: 248 PNVVIWPLERRTC--MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG 305

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
            F EA  L+  M  + I  + +TY++MI  + K    + A ++   M  +G  P+ IT++
Sbjct: 306 KFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFN 365

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
           T+IA + +A ++D    L  ++  +G+  + + Y T+I  + +VG +  A+ LL E+   
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQA------FDA-----GEVKDISVFGCMIE 408
              PN +   T +  L   G++++A  +F+         DA     G   D+  +  +I 
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILIS 485

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
                 K+    E++E+M   G  PD+     V++   K    + A  ++  M
Sbjct: 486 GLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/414 (22%), Positives = 171/414 (41%), Gaps = 17/414 (4%)

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F + K  ++A  L  +M      P  + +  L+ + V   +    +S+  +M     P +
Sbjct: 53  FHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCN 112

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             +  I++  +        A   F  + K+G  P+VV+++TLL      +   EA+ LF 
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFH 172

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +     NVVT+ T++    +     +A  L+  M   G++PN ITY TI+    K G
Sbjct: 173 QMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 314 KLDRAAMLFQKLR-----SSGVEIDPVLYQT-MIVAYERVGLVAHAKRLLHELRQ----- 362
               A  L +K+         V I P+  +T MI  +   G  + A++LL E+ +     
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +     I    + G+  EA  ++ +    G +     +  MI+ F +  +      +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F  M + G  PD      ++  Y + +  +    L  EM E G V +   +  ++  +  
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 483 RKDFNMLESLF-ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
             D N  + L  E + S    N    + ++ G+ +   +L DA  +   M K +
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG-KLKDALEMFKAMQKSK 461



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP+V  +  ++    +A + +    LF EM +RGI  +  TY TLI  F K G  + A+
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGAL 602

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
              Q+M    V  D +   N++       +  +A+++   L+ S
Sbjct: 603 DIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 240/489 (49%), Gaps = 32/489 (6%)

Query: 37  LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           +A  +F+     G     Y +S LI+ +G+ G+ + AIS    M++  +  +LV Y+ +I
Sbjct: 251 IAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310

Query: 97  ELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           +   K   ++ +    F  ++ + + PD + +N+++ V  +  L++ AR L +EM  + +
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRI 370

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           + D  SY+TLL+   +  +   A  + A+M       ++ + + +ID + +     +A  
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  MR + I    VSYNTLL +Y +     EA+ + R M    I+++VVTYN ++  YG
Sbjct: 431 LFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++++   +  EM+   + PN +TYST+I  + K G    A  +F++ +S+G+  D V
Sbjct: 491 KQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVV 550

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
           LY  +I A  + GLV  A  L+ E+ +    PN +   + I    R+  +E +       
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGG 610

Query: 392 ---FDAGEVKDISVF--GCMIELFSRNKKYAN----------------VIEVFEKMRSAG 430
              F +  + +++      +I+LF +     N                ++EVF KM    
Sbjct: 611 SLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLE 670

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY-GARKDFNM- 488
             P+    + +LN+  +   FE A  L  E++    +F ++V+  +  L  G R++  + 
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLMGQRENVWLQ 726

Query: 489 LESLFERLD 497
            +SLF++++
Sbjct: 727 AQSLFDKVN 735



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 171/304 (56%), Gaps = 1/304 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++  YN V+    +   +++     FDEM++  + PDR T+++L+    + G++++A +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARN 360

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M   R+  D+  Y+ L++   K      A  I +++ +  I+P++V+Y+T+I+ F 
Sbjct: 361 LFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFA 420

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA  F EA  L  EMR   +  D VSY+TLL++Y +  +  EAL +  EM  V    D+ 
Sbjct: 421 KAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++  YG+     +  ++F  M++  + P++++Y+TL+  Y +  L+ EA+ +FR  
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF 540

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  +VV Y+ +I    K+     A +L+ EM   GI PN +TY++II  +G++  +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600

Query: 316 DRAA 319
           +R+A
Sbjct: 601 ERSA 604



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 183/375 (48%), Gaps = 12/375 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N +L    R   WE A  LFDEM  R I  D ++Y+TL+    K G  D A   
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM   R+  ++V YS +I+   K   + +A+++F  ++   I  D V+YNT+++++ K
Sbjct: 397 LAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTK 456

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  ++ EM   G+K D V+Y+ LL  Y +  K+ E   VFAEM   +   +L T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLT 516

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y +  + K+A  +F   +  G+   VV Y+ L+    +  L G A+ L   M 
Sbjct: 517 YSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ I  NVVTYN++I  +G+S   E++     +  N G  P   + S +  +    G  +
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMERSA----DYSNGGSLP--FSSSALSELTETEG--N 628

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITIL 375
           R   LF +L S G   +  + +      + +  +    R +H+L  +PN +     +   
Sbjct: 629 RVIQLFGQLTSEG---NNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685

Query: 376 ARAGRIEEATWVFRQ 390
           +R    E+A+ +  +
Sbjct: 686 SRCNSFEDASMLLEE 700



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 202/428 (47%), Gaps = 9/428 (2%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ--QMEQDRVSGDLVLYS 93
           E+ H L      +    D  TY  +I   G  G  D A+ + +     + R +    L S
Sbjct: 180 EMFHSLMLSFESKLCGSDDCTY--IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLAS 237

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            +I    +    + A  IF    S G    + A++ +I+ +G++ L +EA  +   M+E 
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297

Query: 154 GVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G++P+ V+Y+ +++   +   +F +    F EM       D  T N ++ V  +  + + 
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEA 357

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A  LF  M    I+  V SYNTLL    +      A  +   M  K I  NVV+Y+T+I 
Sbjct: 358 ARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVID 417

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + K+   ++A NL  EM+   I  + ++Y+T+++I+ K G+ + A  + +++ S G++ 
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D V Y  ++  Y + G     K++  E+++    PN +   T I   ++ G  +EA  VF
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVF 537

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           R+   AG   D+ ++  +I+   +N    + + + ++M   G  P+      +++++G+ 
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597

Query: 449 REFETADD 456
              E + D
Sbjct: 598 ATMERSAD 605



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 175/367 (47%), Gaps = 33/367 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R    VF+YN +L  + +  Q +LA  +  +M  + I P+  +YST+I  F K G FD A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEA 428

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           ++   +M    ++ D V Y+ L+ +  K+    +A+ I   + S GI  D+V YN ++  
Sbjct: 429 LNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +GK   + E + +  EM+ + V P+ ++YSTL++ Y +   + EA+ VF E        D
Sbjct: 489 YGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRAD 548

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF-------- 245
           +   + +ID   +  +   A  L   M K GI P+VV+YN+++  +G +           
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSN 608

Query: 246 GEAIHLFR--LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL-------MQE------- 289
           G ++      L +  E E N V     I+++G+ L  E    +       MQE       
Sbjct: 609 GGSLPFSSSALSELTETEGNRV-----IQLFGQ-LTSEGNNRMTKDCKEGMQELSCILEV 662

Query: 290 ---MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              M    I+PN +T+S I+    +    + A+ML ++LR    ++  V++  ++   E 
Sbjct: 663 FRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQREN 722

Query: 347 VGLVAHA 353
           V L A +
Sbjct: 723 VWLQAQS 729



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 137/276 (49%), Gaps = 17/276 (6%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI   G+      A R+F +    G   +V +++ L+  YG + L  EAI +F  M+   
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 260 IEQNVVTYNTMIKIYGK-SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +  N+VTYN +I   GK  +E ++      EMQ   ++P+ IT+++++A+  + G  + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             LF ++ +  +E D   Y T++ A  + G +  A  +L ++      PN +   T I  
Sbjct: 359 RNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDG 418

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISV------FGCMIELFSRNKKYANVIEVFEKMRS 428
            A+AGR +EA  +F      GE++ +++      +  ++ ++++  +    +++  +M S
Sbjct: 419 FAKAGRFDEALNLF------GEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            G   D      +L  YGK  +++    +++EM+ E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE 508


>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
          Length = 579

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 206/432 (47%), Gaps = 27/432 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + Y  +++  LR+++      +++EMR++G   D + Y+ L+    K GM D A    
Sbjct: 127 SGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVF 186

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+Q     D   Y+ LI ++ K    SK +S F  + S G V +L+A+NT+I   GK 
Sbjct: 187 EDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKN 246

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           K+  +   ++ +M E   +P+  +YS  L++          L+   +++ +N  LD+ + 
Sbjct: 247 KMVDKVIFVLSKMVENDCQPNQFTYSITLDI----------LATEGQLHRLNEVLDICSR 296

Query: 198 NIMIDVYGQL-------DMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            +   +Y  L         A +A  +F   W+  + G   + VS   +L V   AE   E
Sbjct: 297 FMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVS---MLEVLCNAEKTLE 353

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI L  +M  K I  +V  YN +    GK  +    +NL  +M+  GI P+  TY+ +I+
Sbjct: 354 AIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMIS 413

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
            +G+ G +D+A+ LF+ + +S  + D V Y ++I    + G +  A  L  E+++    P
Sbjct: 414 SYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDP 473

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +       I    ++ ++E A  +F +    G   +I  +  +++   R  K     +++
Sbjct: 474 DVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLY 533

Query: 424 EKMRSAGYFPDS 435
           E M+  G  PDS
Sbjct: 534 ETMKQQGLIPDS 545



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 35/404 (8%)

Query: 9   INEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           + EE R   Y   +FAYN++L  + +A   + A  +F++M+Q+   PD YTY+ LI   G
Sbjct: 150 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSG 209

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G     +S+  +M       +L+ ++ +IE   K     K I + S++  +   P+  
Sbjct: 210 KAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQF 269

Query: 126 AYNTMINVFG--------------------------------KAKLFKEARLLIEEMREQ 153
            Y+  +++                                  K+    EA  +   M   
Sbjct: 270 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 329

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
             K D  ++ ++L +     K +EA+ +   M E     D+   N++    G+L      
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M+  GI P V +YN ++  YG   L  +A  LF +M+    + +VVTYN++I  
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 449

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK  + ++A  L +EMQ +G +P+  TYS +I  +GK+ K++ A  LF ++ S G   +
Sbjct: 450 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            V Y  ++   ER G    A +L   ++Q   IP     +IL R
Sbjct: 510 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILER 553



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 35/220 (15%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN+V   + + KQ      LFD+M+  GI PD +TY+ +I+ +G+ G+ D       
Sbjct: 370 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD------- 422

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
                                       KA  +F  +++S   PD+V YN++IN  GK  
Sbjct: 423 ----------------------------KASELFEVMEASSCKPDVVTYNSLINCLGKHG 454

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA +L +EM+E+G  PD  +YS L+  + +++K   A S+F EM    C  ++ T N
Sbjct: 455 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 514

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           I++D   +    ++A +L+ +M++ G+ P  ++Y+ L R+
Sbjct: 515 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERL 554



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 129/256 (50%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++++ ++     AH +F  M       DR  + +++           AI  L  M 
Sbjct: 303 YSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMP 362

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+ +Y+ +     KL   S   ++F ++K++GI+PD+  YN MI+ +G+  L  
Sbjct: 363 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 422

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L E M     KPD V+Y++L+N   ++    EA  +F EM E     D+ T +I+I
Sbjct: 423 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 482

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +  + A  LF  M   G  P++V+YN LL          EA  L+  M+++ + 
Sbjct: 483 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 542

Query: 262 QNVVTYNTMIKIYGKS 277
            + +TY+ + ++  +S
Sbjct: 543 PDSITYSILERLESRS 558



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/382 (19%), Positives = 170/382 (44%), Gaps = 7/382 (1%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G++    +Y  ++  ++ + +  +   V+ EM      LD+   N+++D   +  M   A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            ++F  M++    P   +Y  L+R+ G+A    + +  F  M  K    N++ +NT+I+ 
Sbjct: 183 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 242

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK+   +K   ++ +M     +PN  TYS  + I    G+L R   L + L      ++
Sbjct: 243 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR---LNEVLDICSRFMN 299

Query: 334 PVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +Y  ++ +  + G  + A     R+ +   + +     + + +L  A +  EA  +  
Sbjct: 300 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              + G V D+ ++  +     + K+ + +  +F+KM++ G  PD     ++++SYG++ 
Sbjct: 360 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 419

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + A +L+  M+   C      +  +++  G   D +    LF+ +           + 
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           ++   + ++N++  A  + + M
Sbjct: 480 ILIECFGKSNKVEMACSLFDEM 501


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 210/448 (46%), Gaps = 8/448 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           +A   W   +  Y+    +YN +L  + ++ + +  +G +++M   G  P+ YTY  L+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              +   F+ A S  + M     S ++  YS LI    +     +A  + + +   G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           ++V Y ++++   K    KEA  L   M  +G  PD V Y+ L++ + +     EA  +F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM E  C   + T N ++  + +         LF  M + G  P++ ++N LL  + + 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
               EA  LF  M+      +VV+YNT+I+ +  K   HE A  L++EM   G+ P+ ++
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE-AQRLLREMIRSGVGPDIVS 299

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ +I  + K+G LD A  LF ++  SG+E D   Y T+I    R G V  A  +  ++ 
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 362 QPNTIPRETAITI-----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
              + P + A+ I     L R  R+ E+  +F+       V  I  +  ++    + K+ 
Sbjct: 360 ANGSAP-DAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRS 418

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNS 444
            +V E+F ++   G+ PD  I  ++L +
Sbjct: 419 DDVCEIFHELTERGFSPDVEISKVILET 446



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 31/247 (12%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G  P+  +Y  LLR   +A+ F EA  +FR M  +    NV +Y+ +I    +  +
Sbjct: 43  MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            ++A  L+ EM + G +PN +TY ++++   K GKL  A  LF ++   G   D V+Y  
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           +I  + + G +  A RL                               F +  + G +  
Sbjct: 163 LIDGFSKKGDMGEAYRL-------------------------------FEEMLEKGCIPT 191

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  ++  FSR  ++  V  +F+ M   G  P+      +L+ + K+ +   A  L+ 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 460 EMQEEGC 466
           EM+  GC
Sbjct: 252 EMRSLGC 258



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 4/210 (1%)

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
              ++YN ++++  KS   +       +M   G  PN  TY  ++    +A + + A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILAR 377
           F+ + + G   +   Y  +I    R   V  A  LL+E+     QPN +   + ++ L +
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G+++EA  +F +    G   D  V+  +I+ FS+         +FE+M   G  P    
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCV 467
              +L+ + +  EF     L+ +M  +GCV
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 57/134 (42%)

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT      +  L +A R EEA  VFR     G   ++  +  +I    R +K     E+
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G+ P+      +L+   K+ + + A DL+S M   GC     V+  ++  +  
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 483 RKDFNMLESLFERL 496
           + D      LFE +
Sbjct: 170 KGDMGEAYRLFEEM 183


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 190/385 (49%), Gaps = 6/385 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+L  + ++    P+   YN ++  + +A++   A+ L +EM   G  PD +TY+TLI
Sbjct: 100 AVALLSKMRKKC--VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGI 120
           T F K    D A+   +Q+       D+V YS LI+   K     +AI +F R+ KS   
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P+ V YN++I+ F +     EA  L+E M E G  PD V+Y+TL+N + +  +  +A  
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  +M       D+ T   ++D   + +   DA  +   MR+    P+V +YNT+L  Y 
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 337

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            A    EA     +++  +   NVV++N MI+   K     +A  L++E + R   P+ +
Sbjct: 338 RANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQK-LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            Y+T+I    +  K+D A  +++K L   G   + + Y T+I      G++  A+  + +
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK 455

Query: 360 LRQPNTIPRETAITILARAGRIEEA 384
              PN       I    +A R E+A
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDA 480



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 211/463 (45%), Gaps = 25/463 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V+ Y  V+  +    +   A    +EM  R + P+  TY+ LI    K G  D A+
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L +M +  V    V Y++LI    K    S+A  +   +  SG +PD+  Y T+I  F
Sbjct: 102 ALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLD 193
            K+K   +A  + E++  +G +PD V+YS L++   +  +  EA+ +F  M    +C  +
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T N +I  + ++    +A  L   M + G  P VV+Y TL+  + +     +A  L  
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M RK +  +VVT+ +++    +      A +++ EM+ +   P   TY+TI+  + +A 
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340

Query: 314 KLDRAAMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           +L+ A    +K     ++  P  V +  MI    +V   + A  L+ E R+    P+ + 
Sbjct: 341 QLEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L R  +++EA  V+R+  +          GC+    + +     +       R
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEP--------GCLPNSITYSTLITGLCNAGMLDR 448

Query: 428 SAGYF-----PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + GY      P+     L+++++ K    E A +L  +M + G
Sbjct: 449 ARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 239/524 (45%), Gaps = 46/524 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S     Y  +++ + + K+ E A     +M  +G  PD YTY+ +I     E     A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    ++ ++V Y+ LI+   K     +A+++ S+++    VP  V YN++I+   
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   EA  L+EEM   G  PD  +Y+TL+  + ++ K                     
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK--------------------- 165

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RL 254
                         + DA R+F  +   G  P VV+Y+ L+    +     EAI LF R+
Sbjct: 166 --------------SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++      N VTYN++I  + +  + ++A NL++ M   G  P+ +TY+T++  + K  +
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-ETAIT 373
           LD A  L  ++   G+  D V + +++    R   ++ A  +L E+R+ +  P   T  T
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331

Query: 374 IL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           IL    RA ++EEA     +  D     ++  F  MI    +  + +  +E+ E+ R   
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD  +   V++   + ++ + A  +Y +M EE     + + +   +L     +  ML+
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS--TLITGLCNAGMLD 447

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                ++     N    ++++   + +ANR  DA  +++ M +R
Sbjct: 448 RARGYIEKGCVPNIGT-YNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/418 (21%), Positives = 177/418 (42%), Gaps = 41/418 (9%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D V Y ++I    K K  ++A + + +M  +G  PD  +Y+ +++     ++  EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM   N   ++ T  ++ID   +     +A  L   MRK  + P+ V+YN+L+    +A
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           E   EA  L   M       ++ TY T+I  + KS + + A  + +++  RG  P+ +TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S +I    K G+L  A  LF ++  SG  +                              
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCM------------------------------ 218

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT+   + I+   R G+++EA  +  +  + G   D+  +  ++  F +  +  +  ++
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G  PD      +++   +      A  +  EM+ + C  +   +  +L  Y  
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 483 RKDFNMLES----LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
               N LE     + E +D   N+     + ++ G+  + NR ++A  ++    +RR 
Sbjct: 339 A---NQLEEARKFMLEEMDCPPNV--VSFNIMIRGLC-KVNRSSEAMELVEEARRRRC 390



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 10/347 (2%)

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           +C  D  T   +I    ++   + A      M   G  P V +Y  ++          EA
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
                 M  + +  NVVTY  +I    K    ++A  L+ +M+ + + P A+TY+++I+ 
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             KA +   A  L +++  SG   D   Y T+I  + +      A R+  +L     +P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNKKYANVIEVF 423
            +     I  L + GR++EA  +F +   +G     +V +  +I  F R  K    + + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+M   G  PD      ++N + KL   + A DL ++M  +G +  D V F  L + G  
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG-LTPDVVTFTSL-MDGLC 302

Query: 484 KDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           ++  + ++  +   +   S       ++ +   Y RAN+L +A + M
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V ++N+++R + +  +   A  L +E R+R   PD   Y+T+I    +E   
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410

Query: 71  DSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    ++M E+     + + YS LI          +A     +    G VP++  YN 
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNL 466

Query: 130 MINVFGKAKLFKEARLLIEEMREQG 154
           +I+ F KA   ++AR L+++M ++G
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQRG 491


>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
          Length = 659

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 184/366 (50%), Gaps = 5/366 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  + + ++   +A++W  A G+  EM+ RG+ PD  +++T +   GK G +D A+    
Sbjct: 226 VVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFT 285

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           ++E    + +LV Y+  I    +     +A  +   ++   + PD V+YNT++  F K  
Sbjct: 286 EIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKN 345

Query: 139 LFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +K A  L+ EM+E  GV PD +SY+T +++  +  ++  A  +  E        D+ + 
Sbjct: 346 QWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSY 405

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N ++   G+      A  LF  M ++G+ P  VS+NT +     A  +  A+ + R M+ 
Sbjct: 406 NTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEA 465

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + I  NV +Y   +   G++ E E+A  LM+EM+ RG+  N  TY+  +    + G +DR
Sbjct: 466 RSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDR 525

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAIT 373
             +L +++   GVE + V Y   + A  RVG    A  +L ++ Q     +++   TA++
Sbjct: 526 VLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALS 585

Query: 374 ILARAG 379
              RAG
Sbjct: 586 TAGRAG 591



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 182/349 (52%), Gaps = 3/349 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + ++N  +  + +A Q++LA  LF E+   G AP+  +Y+T I   G+ GM D A   
Sbjct: 259 PDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHEL 318

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-SSGIVPDLVAYNTMINVFG 135
           L++M+   V  D V Y+ ++    K + +  A+ + + +K + G+ PDL++YNT ++V  
Sbjct: 319 LREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCA 378

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA  ++ A  L+ E   QG++PD VSY+T+++      ++++AL +F  M EV    D  
Sbjct: 379 KAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRV 438

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N  +    +    + A ++   M    I P+V SY   +   G A  +  A+ L   M
Sbjct: 439 SFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEM 498

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + + +  NV TY   +    +    ++   L++EM  +G+EPN ++Y+  +    + GK 
Sbjct: 499 EVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKW 558

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK--RLLHELRQ 362
           DRA+ + +++   G+ +D V Y+T +    R G     +  +++HE RQ
Sbjct: 559 DRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGDEEGERLTKIVHESRQ 607



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 189/378 (50%), Gaps = 8/378 (2%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N VL N +R + W  A  + D      I  D   ++  I   G+   +  A+  L++M+ 
Sbjct: 198 NFVLYNCMRRRDWTRALTVLDAPL---IEVDVVGFTMAIKACGQARRWREALGVLREMQA 254

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  DLV ++  ++   K   Y  A+ +F+ ++  G  P+LV+YNT I+  G+A +   
Sbjct: 255 RGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDR 314

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNIMI 201
           A  L+ EM+   V+PD+VSY+T++  + + +++  AL + AEM E      DL + N  +
Sbjct: 315 AHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAM 374

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
            V  +    + A  L       G+ P VVSYNT++   G A  + +A+ LF +M+   + 
Sbjct: 375 HVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVA 434

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            + V++NT +    ++L+ + A  +++EM+ R I PN  +Y+  +   G+AG+ +RA  L
Sbjct: 435 PDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALEL 494

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILAR 377
            +++   GV  +   Y   + A  R G V     LL E+     +PN +    A+  + R
Sbjct: 495 MEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNR 554

Query: 378 AGRIEEATWVFRQAFDAG 395
            G+ + A+ V  Q    G
Sbjct: 555 VGKWDRASAVLEQMVQRG 572



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 196/408 (48%), Gaps = 13/408 (3%)

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
           DR   + VLY+ +     +  D+++A+++   L +  I  D+V +   I   G+A+ ++E
Sbjct: 193 DRALVNFVLYNCM-----RRRDWTRALTV---LDAPLIEVDVVGFTMAIKACGQARRWRE 244

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  ++ EM+ +G++PD VS++T ++   +  ++  AL +F E+ +     +L + N  I 
Sbjct: 245 ALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIH 304

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE-IE 261
             G+  M   A  L   M+ + + P  VSYNT++  + +   +  A+ L   M+    ++
Sbjct: 305 ACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVD 364

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++++YNT + +  K+   E+AT L+ E   +G++P+ ++Y+T++   G+AG+  +A  L
Sbjct: 365 PDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDL 424

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F  +   GV  D V + T + A  R      A ++L E+      PN      A+    R
Sbjct: 425 FGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGR 484

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           AG  E A  +  +    G   ++  +   ++   R      V+ + E+M   G  P+   
Sbjct: 485 AGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVS 544

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
             + +++  ++ +++ A  +  +M + G       +   LS  G   D
Sbjct: 545 YTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGD 592



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 109/241 (45%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E     P + +YN  +    +A +WE A  L  E   +G+ PD  +Y+T++
Sbjct: 350 ALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVM 409

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              G+ G +  A+     ME+  V+ D V ++  +    +   +  A+ I   +++  I 
Sbjct: 410 HACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIA 469

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++ +Y   ++  G+A  ++ A  L+EEM  +GV  +  +Y+  ++           L +
Sbjct: 470 PNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVL 529

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM+      ++ +  I +D   ++     A  +   M + G+    VSY T L   G 
Sbjct: 530 LEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGR 589

Query: 242 A 242
           A
Sbjct: 590 A 590


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 229/457 (50%), Gaps = 7/457 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P++  YN+VLR++      + A  LFD +R+R +APDR TYSTL+    K+   D A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA 212

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMIN 132
           +  L +M + RV  D+V Y+ L+    K  ++ K + ++ +L K  G  P+L  YN M++
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K   FKE   + E M    ++PD ++Y  L++    +     A  V++E+ +    +
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    N ++  + Q    ++A + FW         ++ +YN +++   ++ +  EAI L+
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 253 RLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            L+++      + VT+ T+I    ++    KA  + +E +  G + +  +YS++I     
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+L  A  +++K+   G + +  +Y  +I  + +V   + A R+  ++      P  I 
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +A + +EA+ V R+  + G   DI+ +G +I     +KK  + + +++++ 
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
             G   D  +  ++++      + + A  ++S+M+E+
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/471 (21%), Positives = 212/471 (45%), Gaps = 43/471 (9%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLIT 62
           LD ++E   +R  P V  YN +L    +A ++E    ++D++ +  G  P+  TY+ ++ 
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K G F       ++M  + +  D++ Y  LI    +  D   A  ++S +  +G+V 
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 123 DLVAYNTMINVFGKAKLFKEA------------------RLLIEEMREQGVK-------- 156
           D   YN+++  F +A   +EA                   ++I+ + + G+         
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD 392

Query: 157 ---------PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
                    PDTV++ TL++   +N    +A ++F E       LD+ + + MI+    +
Sbjct: 393 LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
               DA +++  M K G  P+   YN L+  + +     +A+ ++  M        V+TY
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT+I    K+ ++++A+++ +EM   G  P+  TY ++I       K+D A  +++++  
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY 572

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIE 382
            G+++D +++  +I      G V  A  +  ++++     PN +   T +  L   G I+
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           +A  ++    + G   DI  +   I+      +    I++ +++ S G  P
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 150/306 (49%), Gaps = 1/306 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D + ++    P    +  ++  + +      A  +F+E R  G   D ++YS++I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G    A+   ++M++D    +  +Y+ LI    ++   S A+ I+S++  +G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P ++ YNT+I+   KA+ ++EA  +  EM E G  PD  +Y +L+     + K  +ALS+
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR-KMGIDPSVVSYNTLLRVYG 240
           + ++      +D+   NI+I          +A  +F  M+ K    P++V+YNTL+    
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLY 626

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E     +A  L+  +    +E ++++YNT IK         +   L+ E+ +RGI P  I
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686

Query: 301 TYSTII 306
           T++ ++
Sbjct: 687 TWNILV 692



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 175/359 (48%), Gaps = 3/359 (0%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +++   +A + + A   +D     G+   R TY+ +I      GM D AI     +E
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR-TYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 82  QDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +D     D V +  LI    +    +KA +IF   + SG   D+ +Y++MIN        
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A  + E+M + G KP++  Y+ L++ + + ++  +A+ ++++M +  C   + T N +
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID   + +  ++A  +   M + G  P + +Y +L+R     +   +A+ +++ +  K +
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           + +V+ +N +I     + + ++A ++  +M + +   PN +TY+T++    + G +D+AA
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
            L+  +   G+E D + Y T I        +    +LL E+     IP      IL RA
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 183/399 (45%), Gaps = 11/399 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++  + R+   + A  ++ E+ + G+  D   Y++L+  F + G    A  W
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA--W 354

Query: 77  LQQMEQDRVSG--DLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINV 133
            +  +    +G  +L  Y+ +I+         +AI ++  L K    +PD V + T+I+ 
Sbjct: 355 -KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +     +A  + EE R  G + D  SYS+++N      + V+A+ V+ +M++  C  +
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N +I  + Q+    DA R++  M   G  P+V++YNTL+    +AE + EA  + R
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       ++ TY ++I+      + + A ++ +++  +G++ + + ++ +I     AG
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 314 KLDRAAMLFQKLR-SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           K+D A  +F  ++       + V Y T++      G +  A  L   +     +P+ I  
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            T I  L    RI E   +  +    G +  +  +  ++
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 171/381 (44%), Gaps = 20/381 (5%)

Query: 99  ARKLSDYSKAISIFSRLKSSG----IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           AR+ SD   A + F+ L        I P+L  YN ++           A  L + +R + 
Sbjct: 132 ARRFSD---ADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ 188

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           V PD ++YSTL+    +  +   AL +  EM       D+   N ++   G    A + +
Sbjct: 189 VAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL---GGCFKAGEFE 245

Query: 215 RLF--WS--MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           ++   W   ++  G  P++ +YN +L    +   F E   ++  M    ++ +V+TY  +
Sbjct: 246 KVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGIL 305

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    +S + + A  +  E+   G+  +A  Y++++  + +AG++  A   +     +G+
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL 365

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEAT 385
             +   Y  MI      G+V  A  L   L +     P+T+   T I  L + G   +A 
Sbjct: 366 R-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAF 424

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F +A  +G+  D+  +  MI       +  + ++V+EKM   G  P+SHI   +++ +
Sbjct: 425 TIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGF 484

Query: 446 GKLREFETADDLYSEMQEEGC 466
            ++     A  +YS+M + GC
Sbjct: 485 CQVYRTSDAVRIYSKMADNGC 505



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 172/399 (43%), Gaps = 28/399 (7%)

Query: 102 LSDYSKAI------SIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           LS +S+AI        F  L S  G  P + ++N +++ F +A+ F +A      +    
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGA 149

Query: 155 ----VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
               + P+  +Y+ +L           A+++F  +       D  T + ++    + D  
Sbjct: 150 FGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRL 209

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNT 269
             A  L   M +  + P VV YN LL    +A  F + + ++ +L++      N+ TYN 
Sbjct: 210 DHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M+    K    ++   + + M    ++P+ ITY  +I    ++G +D AA ++ ++  +G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRL--------LHELRQPNTIPRETAITILARAGRI 381
           + ID  +Y +++  + + G V  A +         L  LR  N +     I  L  +G +
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIM-----IKGLFDSGMV 384

Query: 382 EEAT--WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +EA   W   +  D   + D   FG +I    +N        +FE+ R +G   D    +
Sbjct: 385 DEAIELWDLLEK-DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYS 443

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            ++N    +     A  +Y +M ++GC  +  ++  ++S
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482


>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 492

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 6/405 (1%)

Query: 36  ELAHGL--FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS 93
           +LAH L    +M   G+ P    Y+ LI    + G    A + L +M    +  D   Y+
Sbjct: 68  DLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYN 127

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            L+E     +    A  +  ++   G+  +   Y  +++ + +A   +++  ++ EM+ +
Sbjct: 128 ALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRR 187

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G++ DT  YSTL+ LY +N  + +A  +  EM E+   LD+   N +ID +G+     DA
Sbjct: 188 GIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 247

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            RLF  MR  GI P + ++N L+R +        A+  F  MQ + +  +   + ++I  
Sbjct: 248 RRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISR 307

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+  + ++   L  +M+NRG++ +   Y+ ++ I+G+ G+   A      L++  + + 
Sbjct: 308 LGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLS 367

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFR 389
           P ++  +  AY + GL      +L     E  +PN +     I   + AGR  EA  VF+
Sbjct: 368 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQ 427

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              D+G   D+  +  +++ F R KK+  V EV+ +M  AG  PD
Sbjct: 428 HIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPD 472



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 165/359 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L  +L      LA  L  +M   G+A +R TY  L+  + + G  + +   
Sbjct: 121 PDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWV 180

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M++  +  D   YS L+ L R    + KA  +   ++  G+  D+  YN +I+ FGK
Sbjct: 181 LGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGK 240

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +AR L E+MR +G+KPD  +++ L+  +        AL  FA M E     D   
Sbjct: 241 YGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKI 300

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I   G+     +  +LF  MR  G+  S   Y  L+ +YG+   F +A      ++
Sbjct: 301 FMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALK 360

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +E+  +   +  +   Y +    E+  N++Q M+  GIEPN +  + +I  +  AG+  
Sbjct: 361 AEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHL 420

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            A  +FQ ++ SG+  D V Y T++  + RV        + +E+ +    P   A  +L
Sbjct: 421 EAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKAREML 479



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 181/396 (45%), Gaps = 6/396 (1%)

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVFG 135
           L  ME   +      Y+ LI    +     +A ++   ++  G+ PD   YN ++  +  
Sbjct: 76  LADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLA 135

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A L    RLL++ M + GV  +  +Y  LL+ Y    +  ++  V  EM      LD  
Sbjct: 136 RAHLCLADRLLLQ-MADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTA 194

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             + ++ +Y    M K A  L   M+++G++  V  YN L+  +G+     +A  LF  M
Sbjct: 195 GYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKM 254

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + + I+ ++ T+N +I+ + +    ++A      MQ  G+ P+   + +II+  G+ GK 
Sbjct: 255 RAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKW 314

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D    LF K+R+ G++    +Y  ++  Y + G    A   +  L+        +   +L
Sbjct: 315 DELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVL 374

Query: 376 ARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           A A    G  E+   V +     G   ++ +   +I  FS   ++   + VF+ ++ +G 
Sbjct: 375 ANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGM 434

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD      ++  + ++++FE   ++Y+EM+  GC 
Sbjct: 435 SPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCT 470



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 122/307 (39%), Gaps = 31/307 (10%)

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              +L V A+M              +I    +     +A+ L   MR +G+ P    YN 
Sbjct: 69  LAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNA 128

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL           A  L   M    + +N  TY  ++  Y ++   E +  ++ EM+ RG
Sbjct: 129 LLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRG 188

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           I+ +   YST++ ++   G   +A  L  +++  GVE+D  +Y  +I  + + G +A A+
Sbjct: 189 IQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 248

Query: 355 RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           RL  ++R     P                               DI+ +  +I    R  
Sbjct: 249 RLFEKMRAEGIKP-------------------------------DIATWNALIRWHCRVG 277

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
                +  F  M+  G +PD  I   +++  G+  +++    L+ +M+  G   S  V+ 
Sbjct: 278 NMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYA 337

Query: 475 QMLSLYG 481
            ++ +YG
Sbjct: 338 VLVDIYG 344



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 131/305 (42%), Gaps = 31/305 (10%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G+ PS  +Y  L+R    A    EA  L   M+   +  +   YN +++       
Sbjct: 79  MEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAH 138

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
              A  L+ +M + G+  N  TY  ++  + +AG+L+ +  +  +++  G+++D   Y T
Sbjct: 139 LCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYST 198

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           ++  Y   G+   A  L+ E+++                                G   D
Sbjct: 199 LVRLYRDNGMWKKATDLIMEMQE-------------------------------LGVELD 227

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           + ++  +I+ F +  + A+   +FEKMR+ G  PD      ++  + ++   + A   ++
Sbjct: 228 VKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFA 287

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            MQEEG     ++   ++S  G +  ++ L+ LF+++ +        ++ V+  IY +  
Sbjct: 288 AMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYG 347

Query: 520 RLNDA 524
           R  DA
Sbjct: 348 RFRDA 352


>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
 gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
          Length = 384

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 184/376 (48%), Gaps = 8/376 (2%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVF--GKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           A S+F R+   G    +V Y  +I+ +   K+KL    RLL E M+E G KPD + Y+ L
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLL-EVMKESGKKPDEILYNCL 59

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +N  V + +   A  +  +M       +L T   +I  Y      +D  +LF  M+  G 
Sbjct: 60  VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+  +YN L++ YG   LF EA+ L+  M      ++V TYN  I +YGK    E    
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+ EM  +G+ P+ +TY+T++ ++ K     +A  + +++  +G   +   Y  M+ +  
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           +   VA A +L   L+     PN +     +++  R G   EA  ++ +  +AG +  I 
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +IE +  +  Y   +  F+ MR +G  PD+ I   ++++YGK      A+ LY EM
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEM 359

Query: 462 QEEGCVFSDQVHFQML 477
            +EG V  D + + +L
Sbjct: 360 TKEGFV-PDGITYGIL 374



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 176/368 (47%), Gaps = 38/368 (10%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGL--FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +V  Y V++   LR K  +L H L   + M++ G  PD   Y+ L+      G  ++A  
Sbjct: 16  TVVTYTVIIHGYLRQKS-KLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEK 74

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M++D+VS +LV Y+NLI+             +F  +K  G  P+   YN +I  +G
Sbjct: 75  ILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYG 134

Query: 136 KAKLFKEA-----------------------------------RLLIEEMREQGVKPDTV 160
           +  LFKEA                                     L++EM  +GV PD V
Sbjct: 135 RKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV 194

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+TLL++Y +   FV+A  +  EM E     ++ T NIM+    +     +A +LF ++
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G+ P++V+Y+ +L +YG   L+ EA  L+  M        ++ Y+ +I+ YG    +
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMY 314

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A    Q+M+  GI P+   Y+ ++  +GKAG+   A +L+ ++   G   D + Y  +
Sbjct: 315 QEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGIL 374

Query: 341 IVAYERVG 348
           + A+   G
Sbjct: 375 VRAFANAG 382



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 168/377 (44%), Gaps = 36/377 (9%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKE-GMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
           A  LF  M + G      TY+ +I  + ++    D A+  L+ M++     D +LY+ L+
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                      A  I   +K   +  +LV Y  +I  +      ++ R L +EM+++G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P++ +Y+ L+  Y     F EAL ++ EM+ V C  D+ T NI I +YG+  + +D +RL
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELF------------------------------- 245
              M   G+ P  V+YNTLL VY +   F                               
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 246 ----GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA  LF  ++ K +  N+VTY+ M+ +YG+   + +A  L  EM   G  P  I 
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS +I  +G  G    A   FQ +R SG+  D  +Y  ++ AY + G    A+ L  E+ 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360

Query: 362 QPNTIPRETAITILARA 378
           +   +P      IL RA
Sbjct: 361 KEGFVPDGITYGILVRA 377



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 158/311 (50%), Gaps = 1/311 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD +  + + S ++  Y  +++      + +    LF EM+ +G +P+ +TY+ LI  +
Sbjct: 75  ILDDMKRD-KVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY 133

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G++G+F  A+    +M+    + D+  Y+  I +  K         +   + + G+ PD 
Sbjct: 134 GRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQ 193

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YNT+++V+ K   F +A  ++ EM E G +P+  +Y+ +L+   +     EA  +F  
Sbjct: 194 VTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFEN 253

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +       ++ T + M+ +YG+  +  +A +L+  M + G  P +++Y+ L+  YG   +
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGM 313

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
           + EA+  F+ M++  I  +   Y  ++  YGK+    +A  L  EM   G  P+ ITY  
Sbjct: 314 YQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGI 373

Query: 305 IIAIWGKAGKL 315
           ++  +  AG+L
Sbjct: 374 LVRAFANAGRL 384



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 161/361 (44%), Gaps = 5/361 (1%)

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVY-GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           A S+F  M +  C   + T  ++I  Y  Q      A RL   M++ G  P  + YN L+
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                +     A  +   M+R ++  N+VTY  +IK Y  +   +    L QEM+++G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN+ TY+ +I  +G+ G    A  L+ ++   G   D   Y   I  Y + GL+   +RL
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           L E+      P+ +   T + + A+     +A  + R+  +AG   +I  +  M+    +
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
            +  A   ++FE ++S G  P+    + +L+ YG+   +  A  L+ EM E GC+     
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +  ++  YG    +    + F+ +     +   +++  +   Y +A R  +A  +   M 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360

Query: 533 K 533
           K
Sbjct: 361 K 361


>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
 gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
          Length = 597

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 208/441 (47%), Gaps = 9/441 (2%)

Query: 33  KQWELAHGLFD-EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
           +QWE    + +  +R+    PD   Y+ LI  +G++     A +    + + R       
Sbjct: 150 RQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDT 209

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ L+          +A  + S ++ +GI P    YN  ++   KA+  ++A  + + M+
Sbjct: 210 YALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMK 269

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++  + +T +Y  ++N+Y + ++ + +L VF EM  V C  ++ T   +++ + +  + +
Sbjct: 270 KERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCE 329

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A+ +F  M++ G +P V +YN L+  Y  A L   A  +F LM+    E +  +YN ++
Sbjct: 330 KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILV 389

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             +G++  H++A    QE++ +G+ P   ++  +++   ++G + R   +  +L  SG+ 
Sbjct: 390 DAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLR 449

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--------PNTIPRETAITILARAGRIEE 383
            D      M+ AY R G +   +RL   + +        P+T      +    RAG ++ 
Sbjct: 450 PDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDR 509

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
               FR     G   D+  +   I  ++R K+Y   + VFE+M  AG +PD+    ++L 
Sbjct: 510 MEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLA 569

Query: 444 SYGKLREFETADDLYSEMQEE 464
           +    R+ E    +   M ++
Sbjct: 570 ACSDERQVEQVTAIVRSMHKD 590



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 169/391 (43%), Gaps = 10/391 (2%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           L+ S   PD++ YN +I+ +G+ +   EA      + E    P   +Y+ LL  Y  + +
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              A  V +EM     P   T  N  +D   +   ++ A  ++  M+K     +  +Y  
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXL 282

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++ VYG+A     ++ +FR M+    + N+ TY  ++  + +    EKA  + +EMQ  G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
            EP+   Y+ ++  + +AG    A+ +F  +   G E D   Y  ++ A+ R GL   A+
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
               EL+Q    P   +  +L    AR+G +     V  Q   +G   D      M+  +
Sbjct: 403 AAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAY 462

Query: 411 SRNKKYANVIEVFEKMR-----SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            R  +  ++  +F  M      SAG  PD+    +++N+YG+    +  +  +  +   G
Sbjct: 463 GRAGRLDDMERLFAAMERGDGASAG-APDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARG 521

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
                      +  Y  +K++     +FE +
Sbjct: 522 LAADVVTWTSRIGAYARKKEYGQCLRVFEEM 552



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 160/368 (43%), Gaps = 10/368 (2%)

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSV 229
           +  +A SV+  ++++    DL   + +++V  QL + +  + +     W +R+    P +
Sbjct: 115 RGTDAASVWESLDKIPQAHDLW--DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDI 172

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           + YN L+  YG+     EA   +  +          TY  +++ Y  S +  +A  ++ E
Sbjct: 173 ICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE 232

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           MQ  GI P A  Y+  +    KA   ++A  ++Q+++      +   Y  MI  Y +   
Sbjct: 233 MQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQ 292

Query: 350 VAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              + R+  E++    +PN       +   AR G  E+A  VF +   AG   D+  +  
Sbjct: 293 PMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNA 352

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++E +SR        E+F  M   G  PD     ++++++G+    + A+  + E++++G
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQG 412

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              + + H  +LS +    +    E +  +L            + +   Y RA RL+D  
Sbjct: 413 MRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDME 472

Query: 526 RIMNRMNK 533
           R+   M +
Sbjct: 473 RLFAAMER 480



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 39/230 (16%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A + P V+AYN ++    RA   + A  +F  M   G  PDR +Y+ L+  FG+ G+ 
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA---- 126
             A +  Q+++Q  +   +  +  L+    +  + ++   + ++L  SG+ PD  A    
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 127 -----------------------------------YNTMINVFGKAKLFKEARLLIEEMR 151
                                              YN ++N +G+A            + 
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLA 518

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            +G+  D V++++ +  Y    ++ + L VF EM +  C  D  T  +++
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 208/453 (45%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +F  N+++       Q      +  ++ +RG  P   T +TLI     +G    A+ +
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF 399

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             ++       + V Y+ LI    K+ D   AI +  ++      P++  Y+T+I+   K
Sbjct: 400 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 459

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +L  EA  L  EM  +G+  D V+YSTL+  +    K  EA+ +  EM       D+ T
Sbjct: 460 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT 519

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             I++D  G+    K+A  +   M K  + P V +YNTL+  Y       +A H+F  M 
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +V TY  +I  + KS   ++A NL +EM  + + P+ +TYS+++    K+G++ 
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
               L  ++R  G   D + Y ++I    + G +  A  L ++++    +PNT      +
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + GR+++A  VF+     G   D+ ++  MI    +       + +  KM   G  
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI 759

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P++    +++N+  K  E + A+ L  +M   G
Sbjct: 760 PNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 222/475 (46%), Gaps = 5/475 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +N +L +  + K +  A  L   +  +GI PD +T + LI CF   G      S 
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +       V  + LI+         KA+    +L + G   + V+Y T+IN   K
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               + A  L+ ++  +  KP+   YST+++   +     EA  +F+EM       D+ T
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  +  +   K+A  L   M    I+P V +Y  L+   G+     EA  +  +M 
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  ++ +V TYNT++  Y    E +KA ++   M   G+ P+  TY+ +I  + K+  +D
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---QP-NTIPRETAI 372
            A  LF+++    +  D V Y +++    + G +++   L+ E+R   QP + I   + I
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +++A  +F +  D G   +   F  +++   +  +  +  EVF+ + + GY 
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            D +I  +++  + K    E A  + S+M+E GC+  + V F ++     +KD N
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI-PNAVTFDIIINALFKKDEN 778



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 155/315 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  V  Y+ ++       + + A GL +EM  + I PD  TY+ L+   GKEG    A S
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M +  V  D+  Y+ L+     + +  KA  +F+ +   G+ PD+  Y  +IN F 
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+K+  EA  L +EM ++ + PDTV+YS+L++   ++ +      +  EM +   P D+ 
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID   +      A  LF  M+  GI P+  ++  LL    +     +A  +F+ +
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    +V  YN MI  + K    E+A  ++ +M+  G  PNA+T+  II    K  + 
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 316 DRAAMLFQKLRSSGV 330
           D+A  L +++ + G+
Sbjct: 779 DKAEKLLRQMIARGL 793



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 115/514 (22%), Positives = 228/514 (44%), Gaps = 40/514 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+++L  I +   Y P     N +++ +    Q + A    D++  +G   ++ +Y+TLI
Sbjct: 47  SLSVLTKILKRG-YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G   +AI +L++++      ++ +Y+ +I+   K    S+A  +FS +   GI 
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            ++V Y+T+I  F      KEA  L+  M  + + P+  +Y+ L++   +  K  EA SV
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            A M +     ++ T + ++D Y  +   K A  +F +M  MG+ P V SYN ++  + +
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285

Query: 242 AELFGEAIHLFRLM----------------------------------QRKEIEQNVVTY 267
            +   +A++LF+ M                                  + K I+ ++ T 
Sbjct: 286 IKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I  +    +     +++ ++  RG  P+ +T +T+I      G++ +A     KL +
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE----LRQPNTIPRETAITILARAGRIEE 383
            G +++ V Y T+I    ++G    A +LL +    L +PN     T I  L +   + E
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +F +    G   D+  +  +I  F    K    I +  +M      PD     ++++
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           + GK  + + A  + + M  + CV  D   +  L
Sbjct: 526 ALGKEGKVKEAKSVLAVML-KACVKPDVFTYNTL 558



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 199/449 (44%), Gaps = 15/449 (3%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +  ++ +RG  PD  T +TLI     +G    A+ +  ++       + V Y+ LI    
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           ++ D   AI    ++      P++  YNT+I+   K +L  EA  L  EM  +G+  + V
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YSTL+  +    K  EAL +   M       ++ T NI++D   +    K+A  +   M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K  +  +V++Y+TL+  Y       +A H+F  M    +  +V +YN MI  + K    
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +KA NL +EM      P  I ++ I+  + K      A  L  +L   G++ D      +
Sbjct: 290 DKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW----VFRQAF 392
           I  +  +G +     +L ++ +    P+T+   T I  L   G++++A      +  Q F
Sbjct: 349 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 408

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
              +V     +  +I    +       I++  K+      P+  + + ++++  K +   
Sbjct: 409 QLNQVS----YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 464

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            A  L+SEM  +G + +D V +  L +YG
Sbjct: 465 EAYGLFSEMTVKG-ISADVVTYSTL-IYG 491



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 35/284 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P VF YN ++   L   + + A  +F+ M   G+ PD +TY+ LI  F K  M D
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++  ++M Q  +  D V YS+L++   K    S    +   ++  G   D++ YN++I
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K     +A  L  +M++QG++P+T +++ LL+   +  +  +A  VF         
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ-------- 716

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            DL T    +DVY                           YN ++  + +  L  EA+ +
Sbjct: 717 -DLLTKGYHLDVY--------------------------IYNVMIYGHCKQGLLEEALTM 749

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
              M+      N VT++ +I    K  E++KA  L+++M  RG+
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 144/335 (42%), Gaps = 3/335 (0%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           D + ++S+ +++   G  PD V  NT+I         KEA    +++  QG + + VSY+
Sbjct: 43  DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYA 102

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TL+N          A+    +++      ++   N +ID   +  +  +A  LF  M   
Sbjct: 103 TLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI  +VV+Y+TL+  +       EA+ L  +M  K I  NV TYN ++    K  + ++A
Sbjct: 163 GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEA 222

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +++  M    ++ N ITYST++  +    ++ +A  +F  +   GV  D   Y  MI  
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282

Query: 344 YERVGLVAHAKRLLHEL---RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           + ++  V  A  L  E+   R P  I     +   A+      A  +  +    G   D+
Sbjct: 283 FCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 342

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
                +I  F    +      V  K+   GY P +
Sbjct: 343 FTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 9/302 (2%)

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
           ++N     +LSV  ++ +   P D  T N +I         K+A      +   G   + 
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           VSY TL+           AI   R +  +  + NV  YNT+I    K     +A  L  E
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M  +GI  N +TYST+I  +   GKL  A  L   +    +  +   Y  ++ A  + G 
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 350 VAHAKR----LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           V  AK     +L    + N I   T +        +++A  VF      G   D+  +  
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL--VLNSYGKLREFETADDLYSEMQE 463
           MI  F + K+    + +F++M  + + P   II    +L+S+ K++ + TA  L   ++ 
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPP---IIQFNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 464 EG 465
           +G
Sbjct: 336 KG 337



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 23/121 (19%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+ + + ++    P+ F + ++L  + +  + + A  +F ++  +G   D Y Y+ +
Sbjct: 675 KAIALFNKMKDQG-IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVM 733

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G+ + A++ L +ME++    + V +  +I    K  +  KA  +  ++ + G+
Sbjct: 734 IYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793

Query: 121 V 121
           +
Sbjct: 794 L 794


>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 210/463 (45%), Gaps = 5/463 (1%)

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M  + +  D+V Y+ L+    +     +A  +F  +   GI+PD+  Y+ ++  FGK   
Sbjct: 1   MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            ++   L++EM   G  PD  SY+ LL  + ++    EA+ VF +M    C  +  T +I
Sbjct: 61  LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++++YG+     D   LF  M+    +P+  +YN L+ V+GE   F E + LF  M  + 
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +E N+ TY  +I   GK   HE A  ++  M  +G+ P++  Y+ +I  +G+A   + A 
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEAL 240

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI-PRET---AITIL 375
           + F  +   G +     Y ++I  + + GL   ++ +L ++ Q      R+T    I   
Sbjct: 241 VAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAF 300

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + G+ EEA   + +   A    D      ++ ++          E F ++++ G  P  
Sbjct: 301 RQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSV 360

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFE 494
               ++L  Y K   ++ A  L  EM         QV  QM+   Y    ++ M+E +FE
Sbjct: 361 MCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFE 420

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           +L S+        ++ +        +   A+R++N   KR  F
Sbjct: 421 KLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLF 463



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +  YN +L    R    + A  +F  M + GI PD  TYS L+  FGK    +     L+
Sbjct: 10  IVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLK 69

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +ME      D+  Y+ L+E   +     +A+ +F +++ +G VP+   Y+ ++N++G+  
Sbjct: 70  EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHG 129

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + + R L  EM+    +P+  +Y+ L+N++ E   F E +++F +M E N   ++ T  
Sbjct: 130 RYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE 189

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I   G+  + +DA ++   M + G+ PS  +Y  ++  YG+A L+ EA+  F  M   
Sbjct: 190 GLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV 249

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
             +  V TYN++I+++ K   ++++  ++ +M   G+  N  T++ +I  + + G+ + A
Sbjct: 250 GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEA 309

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITI 374
              + ++  +  + D    + ++  Y   GLV  ++    E++    +P        + +
Sbjct: 310 IKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAV 369

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDI-SVFGCMIEL-FSRNKKYANVIEVFEKMRSAG 430
            A+A R ++A  +  + F    V +I  V G MI   +  +  +  V  VFEK++S G
Sbjct: 370 YAKADRWDDAHQLLDEMF-TNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEG 426



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 185/423 (43%), Gaps = 5/423 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y+ ++    +  + E    L  EM   G  PD  +Y+ L+    + G    A+  
Sbjct: 43  PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGV 102

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +QM+      +   YS L+ L  +   Y     +F  +K S   P+   YN +INVFG+
Sbjct: 103 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 162

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              FKE   L  +M E+ V+P+  +Y  L+    +     +A  +   MNE         
Sbjct: 163 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 222

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ YGQ  + ++A   F +M ++G  P+V +YN+L++++ +  L+ E+  +   M 
Sbjct: 223 YTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMG 282

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  + +N  T+N +I+ + +  + E+A     EM+    +P+  T   +++++  AG ++
Sbjct: 283 QSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVE 342

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            +   F ++++ G+    + Y  M+  Y +      A +LL E+           I  + 
Sbjct: 343 ESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMI 402

Query: 377 RAGRIEEATW-----VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           R    +++ W     VF +    G    +  +  ++E      +      V  +    G 
Sbjct: 403 RGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGL 462

Query: 432 FPD 434
           FP+
Sbjct: 463 FPE 465



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 1/287 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++  Y  ++    +    E A  +   M ++G+ P    Y+ +I  +G+  +++
Sbjct: 178 EENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 237

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     M +      +  Y++LI++  K   Y ++ +I  ++  SG+  +   +N +I
Sbjct: 238 EALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVI 297

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F +   F+EA     EM +    PD  +   +L++Y       E+   F E+  +   
Sbjct: 298 EAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGIL 357

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV-YGEAELFGEAIH 250
             +    +M+ VY + D   DA +L   M    +         ++R  Y +   +    +
Sbjct: 358 PSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEY 417

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           +F  ++ +     V  YNT+++      + E+AT ++ E   RG+ P
Sbjct: 418 VFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFP 464


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 31/421 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P     N +++ +    Q + A    D++  +G   ++ +Y TLI    K G   +AI
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             LQ+++      ++V+YS +I+   K    S+A  +FS +   GI  D+V Y+T+I  F
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 KEA  L+ EM  + + P+  +Y+ L++   +  K  EA SV A M +     D+
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  +   K A  +F +M  MG+ P V +Y  L+  + + ++  EA++LF+ 
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +K +   +VTY+++I    KS       +L+ EM +RG   N ITYS++I    K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH 424

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           LDRA  LF K++  G+                               +PNT      +  
Sbjct: 425 LDRAIALFNKMKDQGI-------------------------------RPNTFTFTILLDG 453

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+++A  VF+     G   ++  +  MI+   +       + +  KM   G  PD
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513

Query: 435 S 435
           +
Sbjct: 514 A 514



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 228/486 (46%), Gaps = 5/486 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R++P +  +N +L +  + K +  A  L   +  +GI PD  T + LI CF   G     
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S L ++ +     D V  + LI+         KA+    +L + G   + V+Y T+IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLING 173

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    + A  L++++  +  KP+ V YST+++   +     EA  +F+EM       D
Sbjct: 174 VCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + +I  +      K+A  L   M    I+P+V +YN L+    +     EA  +  
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M +  ++ +V+TY+T++  Y    E +KA ++   M   G+ P+  TY+ +I  + K  
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL---LHELRQP-NTIPRE 369
            +D A  LF+++    +    V Y ++I    + G + +   L   +H+  QP N I   
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYS 413

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + G ++ A  +F +  D G   +   F  +++   +  +  +  EVF+ + + 
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           GY  + +   ++++ + K    E A  + S+M++ GC+  D V F+++ +   +KD N  
Sbjct: 474 GYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCI-PDAVTFEIIIIALFKKDENGG 532

Query: 490 ESLFER 495
              F++
Sbjct: 533 NVGFDK 538



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 193/428 (45%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ ++  F K   + +A+S   ++E   +  DL+  + LI     
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +   +   S+ +++   G  PD V  NT+I         K+A    +++  QG + + VS
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +  +++      ++   + +ID   +  +  +A  LF  M 
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT 226

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI   VV+Y+TL+  +       EAI L   M  K I  NV TYN ++    K  + +
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +++  M    ++P+ ITYST++  +    ++ +A  +F  +   GV  D   Y  +I
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + +  +V  A  L  E+ Q N +P      + I  L ++GRI     +  +  D G+ 
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQP 406

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            ++  +  +I+   +N      I +F KM+  G  P++    ++L+   K    + A ++
Sbjct: 407 ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 466

Query: 458 YSEMQEEG 465
           + ++  +G
Sbjct: 467 FQDLLTKG 474



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 110/225 (48%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P V  Y+ ++       + + A  +F+ M   G+ PD +TY+ LI  F K  M D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++  ++M Q  +   +V YS+LI+   K         +   +   G   +++ Y+++I
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLI 416

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L  +M++QG++P+T +++ LL+   +  +  +A  VF ++      
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           L++ T N+MID + +  + ++A  +   M   G  P  V++  ++
Sbjct: 477 LNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 4/284 (1%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            R   SV AY  +  N +  K +  A  L   +  +GI PD +T + LI CF   G     
Sbjct: 923  RGVTSVGAYIRIPHNPM--KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFN 980

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             S L ++ +     D + ++ LI         +KA+    +L + G   + V+Y T+IN 
Sbjct: 981  FSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLING 1040

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
              K    + A  L+ ++  +  KPD V Y+T+++   ++    +A  +F EMN      D
Sbjct: 1041 VCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISAD 1100

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE--AELFGEAIHL 251
            + T N +I  +  +   K+A  L   M    I+P+V +YN L+    +   +L  E++ +
Sbjct: 1101 VVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSM 1160

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
               M+    + N VT+  +I    +  E++K   L+ EM  RG+
Sbjct: 1161 LSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 7/229 (3%)

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            DL T NI+I+ +  +        +   + K G  P  +++ TL+          +A+H  
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              +  +  + N V+Y T+I    K  +   A  L++++  R  +P+ + Y+TII    K 
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 313  GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
              + +A  LF ++   G+  D V Y T+I  +  VG +  A  LL+++      PN    
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTY 1139

Query: 369  ETAITILARAGR--IEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNK 414
               +  L + G+  ++E+  +  +  D G   +   F  +I  LF +++
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDE 1188


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 208/455 (45%), Gaps = 34/455 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V  YN ++     A Q + A  L  +M    + PD YTY+TLI      G   +
Sbjct: 128 AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSN 184

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++ L+ M +     D+V Y+ L+E   K S Y +A+ +   +   G  PD+V YN ++N
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +    ++A   ++ +   G +P+TVSY+ +L       ++ +A  +  EM    CP 
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T N++I    +  + + A  +   M + G  P+ +SYN LL  + + +   +A+   
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  +    ++V+YNT++    ++ E + A  L+ +++++G  P  I+Y+T+I    KA
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A  L  ++ S G++ D + Y T+                                
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASG----------------------------- 455

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R  RIEEA   F +  D G     +++  ++    + ++  N I++F  M S+G  
Sbjct: 456 --LCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P+     +++         + A +L++++   G V
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 178/388 (45%), Gaps = 4/388 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD   YNT+I           A  ++E+M  +G  PD V+Y+ LL    +   + +A+ +
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM++  C  D+ T N++++   Q    +DA     ++   G +P+ VSYN +L+    
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           AE + +A  L   M  K    NVVT+N +I    +    E A  ++++M   G  PN+++
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ ++  + K  K+ +A    + + S G   D V Y T++ A  R G V  A  LLH+L+
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P  I   T I  L +AG+ +EA  +  +    G   DI  +  +     R  +  
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +  F K++  G  P + +   +L    K RE   A DL++ M   GC+ ++  +  ++
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKK 505
                         LF +L S   +NKK
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGVVNKK 551


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 250/574 (43%), Gaps = 59/574 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P V +YN +L  V+R KQ  ++A G+F EM + G++P+ YTY+ LI  F   G  +  
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI------------- 120
           + +  +ME++    ++V Y+ +I+   KL    +A  +   +   G+             
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 121 ----------------------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
                                 VPD V +NT+IN +     F +A +L  EM + G+ P+
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+Y+TL+N   +      A+    +M +     +  T   +ID + Q    K A ++  
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M + G  P++++YN L+  +       +A  L + M  +    +VV+Y+T+I  + ++ 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           E EKA  L  EM  +GI P+  TYS++I    K  +L     LFQ++ S G+  D V Y 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I AY   G +  A RL  E+ Q    P+ +     I    +  R +EA  +  +    
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 395 GEVKDISVFGCMIELFSRNKKYANVI----------------EVFEKMRSAGYFPDSHII 438
             V +   +  +I+    N ++ + +                 V E M   GY  +  + 
Sbjct: 583 ESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG-CVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
            ++++ + K+   E A +LY EM   G    S  +     SLY   K+   L  L +   
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE-LNQLLDYTL 700

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               I +  L  V+ GI  +   ++    ++  M
Sbjct: 701 KSCRITEAALAKVLIGINSKEGNMDAVFNVLKDM 734



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 214/470 (45%), Gaps = 10/470 (2%)

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           E +F    +   Q +      DLV+ S       +++  +KA+SI +  KS G +P +++
Sbjct: 115 EDLFQCLKNSYYQCKSSSAVFDLVVKS-----CARVNLINKALSIVNLAKSYGFMPGVLS 169

Query: 127 YNTMINVFGKAKL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           YN +++   + K   K A  + +EM E GV P+  +Y+ L+  +         L  F EM
Sbjct: 170 YNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM 229

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
               C  ++ T N +ID Y +L    +A +L   M   G++P+++SYN ++         
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            E   +   M ++    + VT+NT+I  Y       +A  L  EM   G+ PN +TY+T+
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           I    KAG L+RA     ++R  G+  +   Y T+I  + + G +  A +++ E+ +   
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P  I     I      GR+E+A+ + ++  + G + D+  +  +I  F RN++     +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +  +M + G  PD    + ++    K R      DL+ EM   G    +  +  +++ Y 
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              D +    L + +           ++V+   + + +R  +A R++ ++
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 224/470 (47%), Gaps = 10/470 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS+   N +L+++LRA    L   + + M   GI+PD YTYSTLI  + K   FD+A  
Sbjct: 79  APSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKK 138

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M +     + V Y+ LI    +     +A      ++  G+VPD   Y  +IN   
Sbjct: 139 VLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLC 198

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLDL 194
           K++   EA+ L++EM    +KP+ V Y+ L++ ++      EA  +  EM      P  +
Sbjct: 199 KSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 258

Query: 195 TTCNIM--IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T  N++  +   GQ+D A     L   M +    P  ++YN ++  +       +A  L 
Sbjct: 259 TYDNLVRGLCKMGQMDRAS---LLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLL 315

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+   I  NV TY+ MI    +S E EKA++L++EM  +G++PNA  Y+ +I+ + + 
Sbjct: 316 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 375

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G +  A  +F K+    V  D   Y ++I    +VG V  + +   ++++   +P E   
Sbjct: 376 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 435

Query: 373 TILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           + L       G +E A  + ++  D G   +  ++  ++E + ++     V   F+ M  
Sbjct: 436 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 495

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            G   D+ I  +++++       E A  + SE+++ G V    V+  ++S
Sbjct: 496 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 198/444 (44%), Gaps = 31/444 (6%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YNV++  + R+   E A G   +M   G+ PD +TY  LI    K    + A + L +M 
Sbjct: 155 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 214

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V+Y+NLI+   +  +  +A  +   + ++G+ P+ + Y+ ++    K     
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 274

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A LL+++M     +PDT++Y+ ++  +  +H   +A  + +EM       ++ T +IMI
Sbjct: 275 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               Q    + A  L   M   G+ P+   Y  L+  Y        A  +F  M +  + 
Sbjct: 335 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 394

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++  YN++I    K    E++T    +MQ RG+ PN  TYS +I  + K G L+ A  L
Sbjct: 395 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 454

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            Q++  +G++ + V+Y  ++ +Y                                ++  I
Sbjct: 455 VQRMLDTGLKPNDVIYIDLLESY-------------------------------FKSDDI 483

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+ +  F+   D G + D  ++G +I   S +        V  ++   G  PD H+ + +
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           ++   K  + E A  +  EM ++G
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKG 567



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 210/457 (45%), Gaps = 38/457 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP+V+ Y++++  + ++ + E A  L +EM  +G+ P+ + Y+ LI+ + +EG  
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M +  V  DL  Y++LI    K+    ++   F++++  G++P+   Y+ +
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ + K    + A  L++ M + G+KP+ V Y  LL  Y ++    +  S F  M +   
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD     I+I         + A R+   + K G  P V  Y++L+    +     +A  
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M +K ++ N+V YN +I    KS +   A N+   +  +G+ PN +TY+++I    
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G +  A  L+ ++ ++G+  D  +Y  +                              
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVL------------------------------ 648

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             T  + AG +E+A ++  + F  G    IS F  +++ F +  K    +++   +   G
Sbjct: 649 -TTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 706

Query: 431 YFPDSHIIALV---LNSYGKLREFETADDLYSEMQEE 464
             P++  I  +   L+  GKL E  T   ++ E+Q++
Sbjct: 707 LVPNALTIENIISGLSEAGKLSEVHT---IFVELQQK 740



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 215/462 (46%), Gaps = 5/462 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A+LD ++  A   P+V  Y  ++   +R    + A  +  EM   G+ P++ TY  L+  
Sbjct: 208 ALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  D A   L+QM +D    D + Y+ +IE   +  +   A  + S ++++GI P+
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  Y+ MI+   ++   ++A  L+EEM  +G+KP+   Y+ L++ Y        A  +F 
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M +VN   DL   N +I    ++   +++ + F  M++ G+ P+  +Y+ L+  Y +  
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A  L + M    ++ N V Y  +++ Y KS + EK ++  + M ++G+  +   Y 
Sbjct: 447 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 506

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            +I     +G ++ A  +  ++  +G   D  +Y ++I    +      A  +L E+ + 
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 566

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              PN +     I  L ++G I  A  VF      G V +   +  +I+   +    +N 
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
             ++ +M + G  PD+ + +++        + E A  L  EM
Sbjct: 627 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 12/410 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE-- 152
           L++  +K      A  +   ++  G+ P +   N ++    K  L  +A  L+ ++RE  
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALL----KDLLRADAMALLWKVREFM 108

Query: 153 --QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
              G+ PD  +YSTL+  Y +  +F  A  V  EM E  C L+  T N++I    +    
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           ++A      M   G+ P   +Y  L+    ++    EA  L   M   E++ NVV Y  +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I  + +    ++A  +++EM   G++PN ITY  ++    K G++DRA++L +++     
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATW 386
             D + Y  +I  + R      A RLL E+      PN       I  L ++G  E+A+ 
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   +  V+  +I  + R    +   E+F+KM      PD +    ++    
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           K+   E +   +++MQE G + ++  +  ++  Y    D    E L +R+
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/376 (20%), Positives = 163/376 (43%), Gaps = 39/376 (10%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           ++++D Y +    +DA  +   MR  G+ PS+   N LL+    A+       +   M  
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  +V TY+T+I+ Y K  E + A  ++ EM+ RG   N +TY+ +IA   ++G ++ 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 318 AAMLFQKLRSSGV---------------------------------EIDP--VLYQTMIV 342
           A    + +   G+                                 E+ P  V+Y  +I 
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 343 AYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            + R G    A +++ E+     QPN I  +  +  L + G+++ A+ + +Q        
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D   +  +IE   R+    +   +  +M +AG  P+ +  +++++   +  E E A DL 
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
            EM  +G   +  V+  ++S Y    + ++   +F+++   + +     ++ +     + 
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410

Query: 519 NRLNDASRIMNRMNKR 534
            R+ ++++   +M +R
Sbjct: 411 GRVEESTKYFAQMQER 426



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)

Query: 340 MIVAYERVGLV-AHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           MI AY    +V A   R L +    +    +  +    ++GR+++A  V     D G   
Sbjct: 21  MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAP 80

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            I     +++   R    A + +V E M  AG  PD +  + ++ +Y K+REF+TA  + 
Sbjct: 81  SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 140

Query: 459 SEMQEEGC 466
            EM+E GC
Sbjct: 141 VEMRERGC 148


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 212/460 (46%), Gaps = 4/460 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA +  + ++YN ++  +L++     A  ++  M   G+ P   T+S L+   GK    +
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTE 246

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +  S L++ME   +  ++  Y+  I +  +     +A  I  R++  G  PD+V Y  +I
Sbjct: 247 TVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLI 306

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    A    +A  L  +M+    KPD V+Y T+L+ + +          ++EM      
Sbjct: 307 DALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA 366

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T  I+++   +     +A  L   MRK G+ P++ +YNTL+          +A+ L
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   +     TY   I  YGKS   +KA    ++M+ RGI PN +  +  +    +
Sbjct: 427 FNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAE 486

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+L  A ++F +L+S+G+  D V Y  M+  Y + G V  A  LL ++     +P+ I 
Sbjct: 487 MGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIV 546

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I  L +AGR++EA  +F +  D      +  +  +I    +  +    +E+F  M 
Sbjct: 547 INSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMT 606

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             G  P++     +L+   K  E + A  +  +M    C+
Sbjct: 607 GNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCM 646



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 5/436 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P+++ Y + +R + RA + + A  +   M   G  PD  TY+ LI      G  
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+    +M+      D V Y  +++      D  +    +S +++ G  PD++ +  +
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   KA    EA  L++ MR+QGV P+  +Y+TL++  +  ++  +AL +F  M  +  
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T  + ID YG+   +  A   F  M+  GI P++V+ N  L    E     EA  
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  ++   +  + VTYN M+K Y K+ + ++A  L+ +M     EP+ I  +++I    
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           KAG++D A  +F +L+   +    V Y T+I    + G V  A  L   +      PNTI
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T +  L +   ++ A  +  +      + D+  F  +I      K+ ++ I +F +M
Sbjct: 616 TFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675

Query: 427 RSAGYFPDSHIIALVL 442
           +     PD   +  +L
Sbjct: 676 KKM-LTPDCVTLCTLL 690



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/589 (21%), Positives = 240/589 (40%), Gaps = 75/589 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y V++  +  A + + A  LF +M+     PDR TY T++  F   G  
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                +  +ME D  + D++ ++ L+    K  +  +A  +   ++  G++P+L  YNT+
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   +     +A  L   M   GV P   +Y   ++ Y ++ +  +AL  F +M     
Sbjct: 411 ISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++  CN  +    ++   ++A  +F  ++  G+ P  V+YN +++ Y +A    EAI 
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 251 LFRLMQRKEIEQN-----------------------------------VVTYNTMIKIYG 275
           L   M   + E +                                   VVTYNT+I   G
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  + ++A  L   M   G  PN IT++TI+    K  ++D A  +  K+ +     D +
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVL 650

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEA-------- 384
            + T+I        V+ A  L H++++   P+ +   T +  + + G +E+A        
Sbjct: 651 TFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV 710

Query: 385 ---------------------------TWVFRQAFDAGEV-KDISVFGCMIELFSRNKKY 416
                                      T +F      G V KD SV   +I++  ++K+ 
Sbjct: 711 HRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQA 770

Query: 417 ANVIEVFEKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
                VF +  +  G  P       ++  +  +   E A +L++EM+  GC      +  
Sbjct: 771 LVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNL 830

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           +L  +G     N L  L+E++   S       H+++     ++N L+ A
Sbjct: 831 LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/560 (21%), Positives = 217/560 (38%), Gaps = 110/560 (19%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P++ A N  L ++    +   A  +F+ ++  G+APD  TY+ ++ C+ K G  D AI 
Sbjct: 471  APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             L  M +++   D+++ ++LI    K     +A  +F RLK   + P +V YNT+I   G
Sbjct: 531  LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSY--------------------------------- 162
            K    + A  L   M   G  P+T+++                                 
Sbjct: 591  KEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVL 650

Query: 163  --STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ------LDMAKD-- 212
              +T+++  V   +  +A+ +F +M ++  P  +T C ++  V           +A+D  
Sbjct: 651  TFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFV 710

Query: 213  ------ADRLFWSMRKMGIDPSVVSYNTLL--------RVYGEAELFGEAIHLFRLMQRK 258
                   DR FW     GI     +  T+L        RV  +  +    I +    ++ 
Sbjct: 711  HRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQA 770

Query: 259  EIEQNVV--------------TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             + Q+V               +YN +I+ +      E A NL  EM+N G  P+  TY+ 
Sbjct: 771  LVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNL 830

Query: 305  IIAIWGKAGK-----------------------------------LDRAAMLFQKLRSSG 329
            ++   GK+GK                                   LD+A  LF  L S  
Sbjct: 831  LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890

Query: 330  VEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEAT 385
                P  Y  ++    + G +  AK L  E+     +PN       I    + G +  A 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950

Query: 386  WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             +F++    G   D+  +  ++       +  + +  FEK++  G + DS    L+++  
Sbjct: 951  ELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010

Query: 446  GKLREFETADDLYSEMQEEG 465
            G+    E A  LY EMQ  G
Sbjct: 1011 GRSHRIEEALTLYDEMQSRG 1030



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 152/320 (47%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E    P++ +YN ++   L     E+A  LF EM+  G APD +TY+ L+   GK G  
Sbjct: 782  KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +      +QM       + + ++ +I    K +   KA+ +F  L S    P    Y  +
Sbjct: 842  NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            ++   K+   +EA+ L EEM + G +P+   Y+ L+N + +      A  +F  M     
Sbjct: 902  LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              DL +   ++    +     DA   F  +++ G+    ++YN ++   G +    EA+ 
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            L+  MQ + I  ++ TYN++I   G +   E+A  L +E+Q  G+EPN  TY+ +I  + 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 311  KAGKLDRAAMLFQKLRSSGV 330
             +G  D A  +++++   G 
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGC 1101



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 171/348 (49%), Gaps = 9/348 (2%)

Query: 25   VLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISW--LQQME 81
            +++ + + KQ  +A  +F    ++ G+ P   +Y+ LI  F   G+ +  ++W    +M+
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGF--LGVHNDEMAWNLFTEMK 817

Query: 82   QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                + D+  Y+ L++   K    ++   ++ ++  S   P+ + +N +I    K+    
Sbjct: 818  NAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLD 877

Query: 142  EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            +A  L  ++      P   +Y  LL+  +++ +  EA  +F EM +  C  +    NI+I
Sbjct: 878  KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937

Query: 202  DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
            + +G+      A  LF  M + GI P + SY +L+    EA    +A+H F  +++  + 
Sbjct: 938  NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997

Query: 262  QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             + + YN MI   G+S   E+A  L  EMQ+RGI P+  TY+++I   G AG +++A  L
Sbjct: 998  LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057

Query: 322  FQKLRSSGVEIDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNT 365
            +++L+  G+E +   Y  +I  Y   G      A  KR++     PNT
Sbjct: 1058 YEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNT 1105



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 203/468 (43%), Gaps = 42/468 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
            P V  +N ++  ++  K+   A  LF +M++  + PD  T  TL+    K G+ + A   
Sbjct: 647  PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705

Query: 76   ----------------WLQQM---------EQDRVSGDLVLY-------SNLIELARKLS 103
                            W   M         E+  + GD ++        S L+ + + L 
Sbjct: 706  AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765

Query: 104  DYSKAI---SIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + +A+   S+F R  K  G+ P L +YN +I  F      + A  L  EM+  G  PD 
Sbjct: 766  KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDV 825

Query: 160  VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
             +Y+ LL+ + ++ K  E   ++ +M   +C  +  T NI+I    + +    A  LF+ 
Sbjct: 826  FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885

Query: 220  MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            +      P+  +Y  LL    ++    EA  LF  M       N   YN +I  +GK+ +
Sbjct: 886  LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
               A  L + M   GI P+  +Y++++    +AG++D A   F+KL+ +G+ +D + Y  
Sbjct: 946  VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005

Query: 340  MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            MI    R   +  A  L  E++     P+     + I  L  AG +E+A  ++ +    G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065

Query: 396  EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
               ++  +  +I  +S +    +   V+++M   G  P++   A + N
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 180/395 (45%), Gaps = 17/395 (4%)

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVFGKAKLFKEARLLIEEMR 151
           ++++E+ R        + +F+ +++  I  DL  Y  +   +F +  L ++      +MR
Sbjct: 128 NHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGL-RQTPFAFGKMR 186

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           E G   +  SY+ L++L +++    EAL ++  M        L T + ++   G+    +
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTE 246

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
               L   M  +G+ P++ +Y   +RV G A    EA  + + M+      +VVTY  +I
Sbjct: 247 TVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLI 306

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
                + + + A  L  +M+    +P+ +TY T++  +   G L R    + ++ + G  
Sbjct: 307 DALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA 366

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWV 387
            D + +  ++ A  + G +  A  LL  +R+   +P      T I+ L R  R+++A  +
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY-- 445
           F      G V     +   I+ + ++ +    +E FEKM+  G  P+  I+A   + Y  
Sbjct: 427 FNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN--IVACNASLYSL 484

Query: 446 ---GKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              G+LRE   A  +++ ++  G +  D V + M+
Sbjct: 485 AEMGRLRE---AKVIFNRLKSNG-LAPDSVTYNMM 515


>gi|358345906|ref|XP_003637015.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358347053|ref|XP_003637577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502950|gb|AES84153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503512|gb|AES84715.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 823

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 143/604 (23%), Positives = 269/604 (44%), Gaps = 81/604 (13%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W  ++  Y  +V  YN++   + + ++W +   L++EM + G+ P   TY TL
Sbjct: 124 RALMIFEWFKKKGCYELNVIHYNIMFWILGKERKWRVLESLWNEMNENGVVPVNSTYGTL 183

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------ 114
           I  + K G+ + A++WL +M+ + +  D V    +++L ++  ++ KA   F R      
Sbjct: 184 IDVYSKGGLIEEALAWLLRMQSEGMEPDEVTMGVVVQLYKRAGEFQKAEEFFLRWSRGEP 243

Query: 115 -------------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                              +    +  +   YNT+I+ +GKA   +    +   M +QGV
Sbjct: 244 LRIEIDHNPADTRRHVCNEVSHVNVCLNSHTYNTLIDTYGKAGQIRVVYEIFARMIKQGV 303

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
              TV+++T+++LY  + +  E  S+   M E+ C  D  T NI+I V  + +    A +
Sbjct: 304 VLTTVTFNTMIHLYGNHGRIREVSSLLKRMEELRCLPDTRTYNILISVLVKHNNINLATK 363

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-----EIEQNVVT---- 266
            F  M++  ++P VVSY TLL  Y   ++  EA  + + M  +     E  Q+ +T    
Sbjct: 364 YFAKMKEAFLEPDVVSYRTLLYAYSTRKMVQEAEEIVQEMDERGLKIDEFTQSALTRMYV 423

Query: 267 -------------------------YNTMIKIYGK---SLEHEKATNLMQEMQNRGIEPN 298
                                    Y+  I  YG+   +LE EK     +E +   +   
Sbjct: 424 ESNMLEKSWLWFMRFHQDGNITSCCYSANIDAYGEKGYTLEAEKVFMCCKERKKLSV--- 480

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            + ++ +I  +G     D+A  LF  ++  GV  +   Y ++I           AK  L+
Sbjct: 481 -LVFNVMIKAYGIGNCYDKACQLFDCMKKFGVAANECSYSSLIHILASADKPHIAKPYLN 539

Query: 359 ELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS--R 412
           +++      + IP    I+   + G++  A  ++ +        D  +FG +I  F+   
Sbjct: 540 KMQVAGLVSDCIPYCAVISSFGKLGQLNMAEGLYNEMIGHDVEPDAIIFGALINAFADVA 599

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ--EEG-CVFS 469
           N K AN     ++MR AG+  +  I   ++  Y KL   + A ++Y+ +Q  ++G  VFS
Sbjct: 600 NVKKAN--SYVDRMRKAGFIGNQAIHNTLMKLYTKLGYLKEAQEIYTLLQSSDQGPSVFS 657

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMN 529
                 M+ LY  R      + +FE L  +S  N+   + ++  +Y++  RL++A +I  
Sbjct: 658 SNC---MIDLYTERLMVEQAKEIFESLKKNSIANEFS-YAMMLCMYKKIGRLDEAFQIAK 713

Query: 530 RMNK 533
            M K
Sbjct: 714 EMGK 717



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 243/489 (49%), Gaps = 27/489 (5%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN ++    +A Q  + + +F  M ++G+     T++T+I  +G  G      S L++M
Sbjct: 274 TYNTLIDTYGKAGQIRVVYEIFARMIKQGVVLTTVTFNTMIHLYGNHGRIREVSSLLKRM 333

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+ R   D   Y+ LI +  K ++ + A   F+++K + + PD+V+Y T++  +   K+ 
Sbjct: 334 EELRCLPDTRTYNILISVLVKHNNINLATKYFAKMKEAFLEPDVVSYRTLLYAYSTRKMV 393

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC--N 198
           +EA  +++EM E+G+K D  + S L  +YVE++   ++   F   ++     ++T+C  +
Sbjct: 394 QEAEEIVQEMDERGLKIDEFTQSALTRMYVESNMLEKSWLWFMRFHQDG---NITSCCYS 450

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             ID YG+     +A+++F   ++     SV+ +N +++ YG    + +A  LF  M++ 
Sbjct: 451 ANIDAYGEKGYTLEAEKVFMCCKERK-KLSVLVFNVMIKAYGIGNCYDKACQLFDCMKKF 509

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N  +Y+++I I   + +   A   + +MQ  G+  + I Y  +I+ +GK G+L+ A
Sbjct: 510 GVAANECSYSSLIHILASADKPHIAKPYLNKMQVAGLVSDCIPYCAVISSFGKLGQLNMA 569

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITI 374
             L+ ++    VE D +++  +I A+  V  V  A   +  +R+   I  +    T + +
Sbjct: 570 EGLYNEMIGHDVEPDAIIFGALINAFADVANVKKANSYVDRMRKAGFIGNQAIHNTLMKL 629

Query: 375 LARAGRIEEATWVFR--QAFDAGEVKDISVFG--CMIELFSRNKKYANVIEVFEKMRSAG 430
             + G ++EA  ++   Q+ D G     SVF   CMI+L++         E+FE ++   
Sbjct: 630 YTKLGYLKEAQEIYTLLQSSDQGP----SVFSSNCMIDLYTERLMVEQAKEIFESLKKNS 685

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG-------AR 483
              +    A++L  Y K+   + A  +  EM + G +     +  +L LY        A+
Sbjct: 686 -IANEFSYAMMLCMYKKIGRLDEAFQIAKEMGKLGFLTDLLSYNNVLGLYSMDRRLWEAK 744

Query: 484 KDFN-MLES 491
           K F  M+ES
Sbjct: 745 KTFKEMIES 753



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 1/292 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R   SV  +NV+++       ++ A  LFD M++ G+A +  +YS+LI           A
Sbjct: 475 RKKLSVLVFNVMIKAYGIGNCYDKACQLFDCMKKFGVAANECSYSSLIHILASADKPHIA 534

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +L +M+   +  D + Y  +I    KL   + A  +++ +    + PD + +  +IN 
Sbjct: 535 KPYLNKMQVAGLVSDCIPYCAVISSFGKLGQLNMAEGLYNEMIGHDVEPDAIIFGALINA 594

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F      K+A   ++ MR+ G   +   ++TL+ LY +     EA  ++  +   +    
Sbjct: 595 FADVANVKKANSYVDRMRKAGFIGNQAIHNTLMKLYTKLGYLKEAQEIYTLLQSSDQGPS 654

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + N MID+Y +  M + A  +F S++K  I  +  SY  +L +Y +     EA  + +
Sbjct: 655 VFSSNCMIDLYTERLMVEQAKEIFESLKKNSI-ANEFSYAMMLCMYKKIGRLDEAFQIAK 713

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            M +     ++++YN ++ +Y       +A    +EM   GI+P+  T+  +
Sbjct: 714 EMGKLGFLTDLLSYNNVLGLYSMDRRLWEAKKTFKEMIESGIQPDDFTFRAL 765



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 24/131 (18%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  ++  ++     P  ++ + +I  + +  M + A    + ++++ ++ +   Y+ ++ 
Sbjct: 639 AQEIYTLLQSSDQGPSVFSSNCMIDLYTERLMVEQAKEIFESLKKNSIANEFS-YAMMLC 697

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           + +K+    +A  I   +   G + DL++YN ++ ++   +   EA+   +EM E G++P
Sbjct: 698 MYKKIGRLDEAFQIAKEMGKLGFLTDLLSYNNVLGLYSMDRRLWEAKKTFKEMIESGIQP 757

Query: 158 DTVSYSTLLNL 168
           D  ++  L +L
Sbjct: 758 DDFTFRALGHL 768


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 190/385 (49%), Gaps = 6/385 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+L  + ++    P+   YN ++  + +A++   A+ L +EM   G  PD +TY+TLI
Sbjct: 100 AVALLSKMRKKC--VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGI 120
           T F K    D A+   +Q+       D+V YS LI+   K     +AI +F R+ KS   
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P+ V YN++I+ F +     EA  L+E M E G  PD V+Y+TL+N + +  +  +A  
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  +M       D+ T   ++D   + +   DA  +   MR+    P+V +YNT+L  Y 
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 337

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            A    EA     +++  +   NVV++N MI+   K     +A  L++E + R   P+ +
Sbjct: 338 RANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQK-LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            Y+T+I    +  K+D A  +++K L   G   + + Y T++      G++  A+  + +
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK 455

Query: 360 LRQPNTIPRETAITILARAGRIEEA 384
              PN       I    +A R E+A
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDA 480



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 211/463 (45%), Gaps = 25/463 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V+ Y  V+  +    +   A    +EM  R + P+  TY+ LI    K G  D A+
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L +M +  V    V Y++LI    K    S+A  +   +  SG +PD+  Y T+I  F
Sbjct: 102 ALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLD 193
            K+K   +A  + E++  +G +PD V+YS L++   +  +  EA+ +F  M    +C  +
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T N +I  + ++    +A  L   M + G  P VV+Y TL+  + +     +A  L  
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M RK +  +VVT+ +++    +      A +++ EM+ +   P   TY+TI+  + +A 
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340

Query: 314 KLDRAAMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           +L+ A    +K     ++  P  V +  MI    +V   + A  L+ E R+    P+ + 
Sbjct: 341 QLEEA----RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L R  +++EA  V+R+  +          GC+    + +     +       R
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEP--------GCLPNSITYSTLVTGLCNAGMLDR 448

Query: 428 SAGYF-----PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + GY      P+     L+++++ K    E A +L  +M + G
Sbjct: 449 ARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 239/524 (45%), Gaps = 46/524 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S     Y  +++ + + K+ E A     +M  +G  PD YTY+ +I     E     A  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    ++ ++V Y+ LI+   K     +A+++ S+++    VP  V YN++I+   
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+   EA  L+EEM   G  PD  +Y+TL+  + ++ K                     
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK--------------------- 165

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RL 254
                         + DA R+F  +   G  P VV+Y+ L+    +     EAI LF R+
Sbjct: 166 --------------SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++      N VTYN++I  + +  + ++A NL++ M   G  P+ +TY+T++  + K  +
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-ETAIT 373
           LD A  L  ++   G+  D V + +++    R   ++ A  +L E+R+ +  P   T  T
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331

Query: 374 IL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           IL    RA ++EEA     +  D     ++  F  MI    +  + +  +E+ E+ R   
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD  +   V++   + ++ + A  +Y +M EE     + + +   +L     +  ML+
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS--TLVTGLCNAGMLD 447

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                ++     N    ++++   + +ANR  DA  +++ M +R
Sbjct: 448 RARGYIEKGCVPNIGT-YNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/418 (21%), Positives = 177/418 (42%), Gaps = 41/418 (9%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D V Y ++I    K K  ++A + + +M  +G  PD  +Y+ +++     ++  EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM   N   ++ T  ++ID   +     +A  L   MRK  + P+ V+YN+L+    +A
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           E   EA  L   M       ++ TY T+I  + KS + + A  + +++  RG  P+ +TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S +I    K G+L  A  LF ++  SG  +                              
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCM------------------------------ 218

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT+   + I+   R G+++EA  +  +  + G   D+  +  ++  F +  +  +  ++
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G  PD      +++   +      A  +  EM+ + C  +   +  +L  Y  
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 483 RKDFNMLES----LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
               N LE     + E +D   N+     + ++ G+  + NR ++A  ++    +RR 
Sbjct: 339 A---NQLEEARKFMLEEMDCPPNV--VSFNIMIRGLC-KVNRSSEAMELVEEARRRRC 390



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 10/347 (2%)

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           +C  D  T   +I    ++   + A      M   G  P V +Y  ++          EA
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
                 M  + +  NVVTY  +I    K    ++A  L+ +M+ + + P A+TY+++I+ 
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             KA +   A  L +++  SG   D   Y T+I  + +      A R+  +L     +P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNKKYANVIEVF 423
            +     I  L + GR++EA  +F +   +G     +V +  +I  F R  K    + + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+M   G  PD      ++N + KL   + A DL ++M  +G +  D V F  L + G  
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG-LTPDVVTFTSL-MDGLC 302

Query: 484 KDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           ++  + ++  +   +   S       ++ +   Y RAN+L +A + M
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 5/148 (3%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ EE    P+V ++N+++R + +  +   A  L +E R+R   PD   Y+T+I    +E
Sbjct: 348 FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 68  GMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
              D A    ++M E+     + + YS L+          +A     +    G VP++  
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGT 463

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQG 154
           YN +I+ F KA   ++AR L+++M ++G
Sbjct: 464 YNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 191/347 (55%), Gaps = 1/347 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D + E   Y P    +  ++  +    +   A  L D M QRG  PD  TY  ++
Sbjct: 167 AVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  D A++ L +ME  ++  ++V+YS +I+   K      A+++F+ +++ G+ 
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+++ Y+++I+       + +A  L+ +M E+ + P+ V++S L++ +V+  K V+A  +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM + +   ++ T + +I+ +  LD   +A ++   M +    P+VV+YNTL+  + +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+   + + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           Y+ ++    K GKL +A ++F+ L+ S +E D   Y  MI    + G
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 190/370 (51%), Gaps = 4/370 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P +   N +L       +   A  L D+M + G  PD  T++TLI           A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + + +M Q     DLV Y  ++    K  D   A+++ ++++++ I  ++V Y+T+I+  
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   +A  L  EM  +GV+P+ ++YS+L++      ++ +A  + ++M E     +L
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +ID + +      A++L+  M K  IDP++ +Y++L+  +   +  GEA  +  L
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RK+   NVVTYNT+I  + K+   +K   L +EM  RG+  N +TY+T+I  + +A  
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            D A M+F+++ S GV  + + Y  ++    + G +A A  +   L+    +P+      
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 371 AITILARAGR 380
            I  + +AG+
Sbjct: 504 MIEGMCKAGK 513



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 223/450 (49%), Gaps = 10/450 (2%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + Y  VLR  L   + + A GLF  M Q    P    +S L++   K   FD  IS+ ++
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME   +S +L  Y+ LI    + S  S A+++  ++   G  PD+V  N+++N F     
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A  L+++M E G KPDTV+++TL++    ++K  EA+++   M +  C  DL T   
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 200 MIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           +++     G  D+A +   L   M    I+ +VV Y+T++    +     +A++LF  M+
Sbjct: 224 VVNGLCKRGDTDLALN---LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  NV+TY+++I           A+ L+ +M  R I PN +T+S +I  + K GKL 
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  L++++    ++ +   Y ++I  +  +  +  AK++L  + +    PN +   T I
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A R+++   +FR+    G V +   +  +I  F + +   N   VF++M S G  
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           P+     ++L+   K  +   A  ++  +Q
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 201/427 (47%), Gaps = 4/427 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ +L  + +  +++L     ++M   GI+ + YTY+ LI CF +     
Sbjct: 71  QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +     D+V  ++L+      +  S A+++  ++   G  PD V + T+I
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +         EA  LI+ M ++G +PD V+Y  ++N   +      AL++  +M      
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++   + +ID   +     DA  LF  M   G+ P+V++Y++L+        + +A  L
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  ++I  N+VT++ +I  + K  +  KA  L +EM  R I+PN  TYS++I  +  
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +L  A  + + +       + V Y T+I  + +   V     L  E+ Q     NT+ 
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    +A   + A  VF+Q    G   +I  +  +++   +N K A  + VFE ++
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490

Query: 428 SAGYFPD 434
            +   PD
Sbjct: 491 RSTMEPD 497


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 230/492 (46%), Gaps = 6/492 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P    Y  ++R +      +L   L  EMR+ G         + +  +  + +FD A+
Sbjct: 70  FAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV 129

Query: 75  SWLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             +    Q    +  D V+Y++L+ +  + S      S++S + + GI PD+V +NT++ 
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMK 189

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A   + A L++EEM  +GV PD  +++TL+  +VE      AL V A M E+ C  
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N++I+ Y +L   +DA          G +P  ++YNT +    + +  G A+ + 
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M ++  + +V TYN ++    K+ + E+A  ++ +M +RG  P+  T++T+IA     
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE--- 369
            +L+ A  L +++   GV  D   +  +I A  +VG    A RL  E++     P E   
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 370 -TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I  L   G++ +A  + +     G  +    +  +I+   +  +     EVF++M  
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            G   ++     +++   K ++ + A  L ++M  EG   ++  +  +L+ Y  + D   
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 489 LESLFERLDSDS 500
              + E + ++ 
Sbjct: 550 AADILETMTANG 561



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---- 72
           P V  +N +++ + RA Q   A  + +EM  RG+APD  T++TL+  F +EG  ++    
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 73  -------------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                          A+ ++QQ   D    D + Y+  +    +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A+ +   +   G  PD+  YN ++N   K    +EA+ ++ +M ++G  PD  +
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  ++       D+ T NI+I+   ++     A RLF  M+
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YNTL+         G+A+ L + M+     ++ +TYNT+I    K +  E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  NAIT++T+I    K  K+D A  L  ++ S G++ + + Y +++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  V R     G  
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +++   R     + + +F +M   G  PD+    +V        G ++E   
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE--- 655

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM ++G +  FS    F+ML+
Sbjct: 656 AFDFMLEMVDKGFIPEFS---SFRMLA 679



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+ ++ C
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A   L QM       D+  ++ LI      +   +A+ +  ++   G+ PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K      A  L EEM+  G  PD V+Y+TL++      K  +AL +  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+    + +
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N +TYN+++  Y K  + +KA ++++ M   G E + +TY 
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  + + +R  G+   P  Y  ++ +  R   +  A  L  E+ + 
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVF 403
              P      I+ R      G I+EA     +  D G + + S F
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 92/245 (37%), Gaps = 69/245 (28%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +   +N ++  + + K+ + A GL ++M   G+ P+  TY++++T + K+G    A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI---- 131
            L+ M  +    D+V Y  LI    K      A+ +   ++  G+ P   AYN ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 132 ---NVFGKAKLF-----------------------------KEARLLIEEMREQGVKPDT 159
              N+     LF                             KEA   + EM ++G  P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 160 VSY----STLLNL-----------------------------YVENHKFVEALSVFAEMN 186
            S+      LLNL                             Y++  KF +AL+ F    
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732

Query: 187 EVNCP 191
           E+N P
Sbjct: 733 EINNP 737


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 198/431 (45%), Gaps = 13/431 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  SP+V AY  V+  +L+A + E     F++M      P R TY+ +I    K  M   
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    +QM Q     D + Y+ LI+   K S   +A  +   + + G  P  V Y ++++
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  +  EA+ +I +MRE+G +P    +++LL+ Y+   +  EA  V  EM    C  
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 571

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGEAI 249
           D+     +ID+        +A  +F SM + G  P  ++Y T+++ +   G  E  GE  
Sbjct: 572 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE-- 629

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +  LM +  +  +   YN+++  Y K    ++A  +   M   GI+PNA+T++ ++   
Sbjct: 630 -ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            K GK DRA  LF+++     E+ P L  Y  +I    + G V+ A     E+     IP
Sbjct: 689 FKDGKTDRAFSLFKEMLEKD-EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 368 R----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
                 + I  LA+AGRI EA  +       G   D+  +  +I     +       +VF
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 424 EKMRSAGYFPD 434
           ++M   G  P+
Sbjct: 808 QEMMKRGCAPN 818



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 217/464 (46%), Gaps = 6/464 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V +Y  V++ +  +K+ + A  LF++++  G +P+   Y+ +I    K G  +  +   +
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M           Y+ +I+   K      A  +F ++   G VPD + Y T+I+ F KA 
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EAR L++ M  +G +P  V+Y ++++ + +     EA  V A+M E  C   L    
Sbjct: 483 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 542

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            ++  Y     A++A ++   M   G  P V+ Y +L+ +        EA H+F  M  K
Sbjct: 543 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               + +TY T+I+ + K    E A  +++ M   G+ P+   Y++++  + K  ++D+A
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 662

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-----IT 373
             ++ ++ +SG++ + V +  ++    + G    A  L  E+ + + +P         I 
Sbjct: 663 FGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILID 722

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L +AGR+ EA   F++  D G + +   +  +I   ++  +     ++ E M   G  P
Sbjct: 723 GLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 782

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           D    + ++         +TA D++ EM + GC   ++V +++L
Sbjct: 783 DVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA-PNEVTYKVL 825



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/494 (22%), Positives = 225/494 (45%), Gaps = 18/494 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P +   + ++  + +A + + A+ ++  +  + +A  R  Y++L+  + K G  D
Sbjct: 222 ERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  L QM +     D+  Y+ L+    + +    A+ +F  L S G  P+   Y T+I
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                A+  +EA+   +E        D +SY+T++    ++ +  EA  +F ++    C 
Sbjct: 342 QGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++     +ID   +    +D  + F  M      P+  +Y  ++    +A++  +A  +
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +K    + +TY T+I  + K+ + ++A  L+  M  +G EP A+TY +I+  + K
Sbjct: 456 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
              ++ A  +  ++R  G E    ++ +++  Y   G    A ++L E+      P+ I 
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 575

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I +L   GR+ EA  VF    + G   D   +G +I+ FS+        E+ E M 
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD-- 485
            +G  PD      +++ Y KL   + A  +Y  M   G +  + V F +L ++G  KD  
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG-IKPNAVTFNVL-MHGLFKDGK 693

Query: 486 ----FNMLESLFER 495
               F++ + + E+
Sbjct: 694 TDRAFSLFKEMLEK 707



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/537 (23%), Positives = 214/537 (39%), Gaps = 79/537 (14%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   N+VL  + +A++ + A  LF EM   G  P   +Y+T+I+        D A  +
Sbjct: 18  PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77

Query: 77  LQQM-----EQD-----------------------------RVSGDLVLYSNLIELARKL 102
              M     E D                             R   D+ LY+++I    K 
Sbjct: 78  FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            D      I   + ++G +PD  AY  +I+   K     EA  L E MR+ G   D V++
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 163 STLLNLYVENHKFVEALSVFAEMN--------EVNCPLDLTTC----------------- 197
            TL+     + K  EA  ++ EM         EV   L    C                 
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 198 ----------NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                     N ++D Y +L    D  +L   M +    P + +YN L+  +  A    +
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDD 317

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ LF+L+     + N  TY T+I+    +   E+A     E        + I+Y+T+I 
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIK 371

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
               + ++D A  LF+KL+++G   + V Y  +I    + G +    +   ++   + +P
Sbjct: 372 GLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVP 431

Query: 368 RETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             T  T+    L +A  + +A  VF Q    G V D   +  +I+ FS+  K     ++ 
Sbjct: 432 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           + M + G  P +     +++ + KL     A ++ ++M+E GC     +   +LS Y
Sbjct: 492 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 196/457 (42%), Gaps = 10/457 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R+ P VF Y  V+    +A   +    + +EM   G  PD   Y  LI    K G  D A
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M +    GD V +  LIE         +A  ++  +   G  P L   +++I  
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA    EA  + + +  + V    V+Y++L++ Y +  +  + L +  +M E +   D
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI++  + + +   DA  LF  +   G  P+  +Y T+++   +A+   EA   F 
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF- 357

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                +   +V++Y T+IK    S   ++A  L ++++  G  PN + Y+ +I    KAG
Sbjct: 358 -----DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           +++     F+ +  S        Y  +I    +  ++  A ++  ++ Q    P+TI   
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I   ++A +++EA  +       G       +G ++  F +        EV  +MR  
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           G  P   I   +L+ Y      E A  + +EM   GC
Sbjct: 533 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 569



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y VV+  + +A+    A  +F++M Q+G  PD  TY+TLI  F K    D A   
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M         V Y +++    KL   ++A  + ++++  G  P L  + ++++ +  
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  ++ EM  +G  PD + Y++L++L     +  EA  VF  M E  C  D  T
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE----LFG------ 246
              +I  + ++   + A  +   M K G+ P   +YN+L+  Y + E     FG      
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670

Query: 247 -------------------------EAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                                     A  LF+ ++++ E+   +V+Y  +I   GK+   
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A +  QEM +RGI P   TY+++I    KAG++  A  L + +   GV  D   Y  +
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAG 395
           I       +V  A  +  E+ +    P E    +L R    AGR  +   V +Q F  G
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQG 848



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 10/319 (3%)

Query: 6   LDWINE---------EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           LD INE         E    P +F +  +L   L   + E A+ +  EM  RG APD   
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 575

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y++LI      G    A      M +   + D + Y  +I+   K+ +   A  I   + 
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            SG+ PD  AYN++++ + K +   +A  + + M   G+KP+ V+++ L++   ++ K  
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 695

Query: 177 EALSVFAEMNEVN-CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            A S+F EM E +  P  L +  I+ID  G+     +A   F  M   GI P   +Y +L
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +A    EA  L   M +  +  +V  Y+ +I     S   + A ++ QEM  RG 
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 815

Query: 296 EPNAITYSTIIAIWGKAGK 314
            PN +TY  +   +  AG+
Sbjct: 816 APNEVTYKVLRRGFRAAGR 834



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 155/330 (46%), Gaps = 5/330 (1%)

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA   ++EM   G+ PD V+ + +LN   +  K  +A+ +F EM  + C   + + N +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I     +D   +A + F SM   G +P V+++ TL+  + +A    +  H+      K  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRF 120

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +V  Y ++I  Y K+ + +    +++EM   G  P+A  Y  +I    K G++D A  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP----RETAITILA 376
           LF+++R SG   D V + T+I A    G +  A  L  E+ +    P    +++ I  L 
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +AG+++EA  +++             +  +++ + +  +  + +++  +M     FPD  
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGC 466
              +++  + +    + A +L+  +   GC
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGC 330



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/533 (20%), Positives = 208/533 (39%), Gaps = 71/533 (13%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  L++M    +  D+V  + ++    K     KAI +F  + S G  P +V+YNT+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN------------------ 172
           I+         EA      M + G +PD ++++TL++ + +                   
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 173 ----------HKFVEA------LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
                     H + +A        +  EM    C  D     ++ID   +L    +A  L
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--------------------- 255
           F  MRK G     V++ TL+          EA  L+R M                     
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 256 -----QRKEIEQNV---------VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                +  EI Q V         V YN+++  Y K    +    L+ +M      P+  T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ ++A + +A +LD A  LF+ L S G + +   Y T+I        +  AK    E  
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL 361

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             + I   T I  LA + RI+EA  +F +   AG   ++  +  +I+   +  +  + ++
Sbjct: 362 --DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            FE M  +   P      +V++   K +    A  ++ +M ++GCV     +  ++  + 
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 479

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                +    L + + +         +  +   + + + +N+A  ++ +M +R
Sbjct: 480 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 39/272 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y  ++  +    +   A  +FD M ++G APD  TY T+I  F K G  ++A  
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD------------ 123
            L+ M +  V  D   Y++L++   KL    +A  ++ R+ +SGI P+            
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689

Query: 124 ------------------------LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
                                   LV+Y  +I+  GKA    EA    +EM ++G+ P+ 
Sbjct: 690 KDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPEC 749

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +Y++L+    +  +  EA  +  +M ++    D+   + +I       M   A  +F  
Sbjct: 750 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 809

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           M K G  P+ V+Y  L R +  A   G A+ L
Sbjct: 810 MMKRGCAPNEVTYKVLRRGFRAA---GRALDL 838



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ ++   + E+    P++ +Y +++  + +A +   A   F EM  RGI P+ +TY++L
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G    A   ++ M +  V+ D+  YS LI      S    A  +F  +   G 
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 815

Query: 121 VPDLVAYNTM 130
            P+ V Y  +
Sbjct: 816 APNEVTYKVL 825


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 187/398 (46%), Gaps = 37/398 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  IL  +      +P V  Y  V+  + R  + + A  +  EM+ +G+ PD++T+S L
Sbjct: 95  RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154

Query: 61  IT--C----------------------------------FGKEGMFDSAISWLQQMEQDR 84
           IT  C                                  F K G  + A+  L  ME  +
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
              ++V YS+L+    K  D  +A+ +F R+ S G VP++V Y T+I+    A     AR
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           LL++EM      PDTVSY+ LL+ Y    +  EA  +F EM   +C  D  T   ++  +
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334

Query: 205 GQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
                 ++A  L  +M+   GIDP VV+Y+ ++  Y  A+ F EA    + M  + +  N
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
            VTY+++I    K+   + A  +++ M N+ +EP+  T++++I    + G +D A  L  
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
            + + G+E   V Y T++  + R G +  A  L   +R
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 246/537 (45%), Gaps = 23/537 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-RGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+   YNVV+  + +A+    A+ +  EMR  + +APD  TYST+I  F K+G  D A 
Sbjct: 38  APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 97

Query: 75  SWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             L++M  +D ++ D+V Y+++++   +     +A  +   +K  G+ PD   ++ +I  
Sbjct: 98  EILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157

Query: 134 FGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           +  A+   EA +L  E +     KPD V+Y+ L++ + ++    +A+ +   M    C  
Sbjct: 158 WCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 217

Query: 193 DLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           ++ T + ++      G LD A D   LF  M   G  P+VV+Y TL+     A     A 
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALD---LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M       + V+YN ++  Y +    E+A  L +EM  +   P+ ITY+ ++  +
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334

Query: 310 GKAGKLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
             A +L+ A  L + +++ +G++ D V Y  ++  Y R      A   + E+      PN
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   + I  L +AGR++ A  V +   +      +  F  +I    R        ++  
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC-------VFSDQVHFQML 477
            M + G  P       +L  + +    E A +L+  M+++         +  +Q    ++
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALI 514

Query: 478 SLYGARKDFNMLESLFERLDS-DSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                 ++ +   ++ E L S +    +++   +V G+  RA R  +A +++N ++K
Sbjct: 515 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLL-RAGRTEEAGKLINSISK 570



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 47/388 (12%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + E  +  P+V  Y+ +L  + +A   + A  LF  M  +G  P+  TY+TLI       
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D+A   + +M       D V Y+ L++   +L    +A  +F  + +   +PD + Y 
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328

Query: 129 TMINVFGKAKLFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            ++  F  A   +EAR L+E M+   G+ PD V+YS ++  Y    +FVEA     EM  
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            N                                   + P+ V+Y++L+    +A     
Sbjct: 389 RN-----------------------------------VAPNAVTYSSLIDGLCKAGRVDH 413

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ + + M  K +E +V T+N++I    +  + ++A  L+  M   G+EP  +TY+T++ 
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 473

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVE-------IDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            + + G+++ A  LF+ +R    +       +    +  +I    +   +  A  ++ EL
Sbjct: 474 GFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 533

Query: 361 RQPNTIPRE----TAITILARAGRIEEA 384
           R     P E      +  L RAGR EEA
Sbjct: 534 RSRECEPAEEDCLAIVDGLLRAGRTEEA 561



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 194/391 (49%), Gaps = 15/391 (3%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            +P  V+++ +++ + + ++  +AL+ F +M E   P + T  N++++   +  +   A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTY-NVVVNGLCKARLTSKAY 61

Query: 215 RLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIK 272
            +   MR    + P +V+Y+T++  + +      A  + R ++ R  I  +VVTY +++ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK-LRSSGVE 331
              +  + ++A  +++EM+ +G+EP+  T+S +I  W  A K+D A  L+++ L SS  +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLH--ELRQ--PNTIPRETAITILARAGRIEEATWV 387
            D V Y  +I  + + G +  A ++L   E R+  PN +   + +  L +AG +++A  +
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           FR+    G V ++  +  +I       K      + ++M +    PD+     +L+ Y +
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERLDSDSNINKK 505
           L   E A  L+ EM  + C   D++ +  L + G      + E+  L E + + + I+  
Sbjct: 302 LGRIEEAKQLFKEMATKSC-LPDRITYTCL-VRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 506 ELHH--VVAGIYERANRLNDASRIMNRMNKR 534
            + +  VVAG Y RA R  +A+  +  M  R
Sbjct: 360 VVTYSIVVAG-YSRAKRFVEAAEFIQEMIAR 389



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 9/229 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L+ +   A   P V  Y++V+    RAK++  A     EM  R +AP+  TYS+LI   
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  D A+  L+ M   RV   +  ++++I    +L D  +A  +   + + G+ P +
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 465

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMR--------EQGVKPDTVSYSTLLNLYVENHKFV 176
           V Y T++  F +    + A  L E MR           + P+  ++S L+    +  +  
Sbjct: 466 VTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREID 524

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +A++V  E+    C      C  ++D   +    ++A +L  S+ K+G+
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 186/369 (50%), Gaps = 14/369 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +  ++  + R  +   A  L D M + G+ P++ TY T++    K G   SA++ 
Sbjct: 79  PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138

Query: 77  LQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L++ME+   +  D+V+YS +I+   K   ++ A ++F  ++  GI PD+V Y+ MIN F 
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDL 194
            +  + EA+ L++EM  + + PD V++S L+N  V+      A  +  EM     CP ++
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP-NV 257

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKM-----------GIDPSVVSYNTLLRVYGEAE 243
            TCN ++D        KDA  +F +M+K            G++P V +YN L+       
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
            F EA  L+  M  + I  + VTY++MI    K    ++AT +   M ++   PN +T++
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFN 377

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I  + KAG +D    LF ++   G+  + + Y T+I  + +VG +  +  +  E+   
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437

Query: 364 NTIPRETAI 372
              P    I
Sbjct: 438 GVYPDTITI 446



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 173/339 (51%), Gaps = 13/339 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P V  Y+ ++  + +  +   A  LF EM+ +GI PD  TYS +I
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M   ++S D+V +S LI    K  D + A  +   + SSG+ 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMRE-----------QGVKPDTVSYSTLLNLYV 170
           P++V  NT+++    +   K+A  + + M++            GV+PD  +Y+ L++  +
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              KF+EA  ++ EM       D  T + MI+   +     +A ++F SM      P++V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           ++NTL+  Y +A +  + + LF  M R+ I  N +TY T+I+ + K      + ++ QEM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 291 QNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSS 328
            + G+ P+ IT   ++  +W K  +L +A  + ++L+ S
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKE-ELKKALAMLEELQMS 472



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 222/480 (46%), Gaps = 28/480 (5%)

Query: 50  IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           I  D Y+++ LI CF        A+S   ++ +      LV ++ L+         S+A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +F ++      P++V + T++N   +     EA  L++ M E G++P+ ++Y T+++  
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 170 VENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            +    V AL++  +M E+ +   D+   + +ID   +     DA  LF  M+  GI P 
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V+Y+ ++  +  +  + EA  L + M  ++I  +VVT++ +I    K  +   A +L+Q
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLY 337
           EM + G+ PN +T +T++     +GKL  A  +F+ ++ S           GVE D   Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I      G    A+ L  E+      P+T+   + I  L +  R++EAT +F     
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +I  F  +I  + +     + +E+F +M   G   ++     ++  + K+     
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 454 ADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           + D++ EM   G V+ D +  + ML+   ++++     ++ E L    +      HH+V 
Sbjct: 427 SLDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMD------HHLVG 479



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 123/282 (43%), Gaps = 13/282 (4%)

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +I  ++ ++N +IK +    +   A +   ++   G  P  +T++T++       ++  A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITI 374
             LF ++    V    V + T++    R G V  A     R++ +  QPN I   T +  
Sbjct: 70  LDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           + + G    A  + R+  +   +K D+ ++  +I+   ++ ++ +   +F +M+  G FP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESL 492
           D    + ++N +    ++  A  L  EM     +  D V F  +++      D N  + L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK-ISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 493 F-ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             E + S    N    + ++ G+ + + +L DA  +   M K
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCD-SGKLKDALEMFKAMQK 285


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 220/489 (44%), Gaps = 39/489 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM------ 69
           +P  F +N +L ++++AK    A  L  +M   GI  D +T++ LI CF + G+      
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 70  ----------------FDSAISWL-------QQME-QDRVSG-----DLVLYSNLIELAR 100
                           F++ I  L       Q +   D+V       D V Y  LI    
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K+   + A+ +  R+    + P+ V YN +I+   KAKL  +A  L  +M  + + PD  
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+ L++ +    K   A+ +F +M + N   ++ T NI++D + +     DA  +   M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K  I P VV+YN+L+  Y       +A  +F  M    +  NV  Y TM+  + K    
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A NL +EM+ R I PN +TYS++I    K G++  A  L  ++   G   + V Y ++
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGE 396
           + A  +   V  A  LL  L+     P     TI    L ++GR+E+A  VF      G 
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  +  MI+ F     +   + +  KM   G  P++    LV+ S  +  E +TA+ 
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEK 537

Query: 457 LYSEMQEEG 465
           L  EM   G
Sbjct: 538 LLREMIVRG 546



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 216/478 (45%), Gaps = 5/478 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           +  +   P  + ++ +++   K     +A+S  QQME + +  D   ++ LI    +L  
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
            S + SIF+++   G  P  + +NT+I          +A    +++  QG   D VSY T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+N   +  +   AL +   ++      +    N++ID   +  +  DA  L+  M    
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P V +YN L+  +        AI LF  M+++ I  NV T+N ++  + K  +   A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++  M    I+P+ +TY++++  +    K+++A  +F  + S GV  +  +Y TM+  +
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++ +V  A  L  E+R     PN +   + I  L + GRI  A  +  +  D G+  +I
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  +++   +N      I +   ++  G  PD +   +++    +    E A +++ +
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFED 471

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYER 517
           +  +G       +  M+  +  +  F+   +L  +++ +  I N K    V+  ++E+
Sbjct: 472 LLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 163/317 (51%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P VF YN ++       +   A  LF++M++  I P+ YT++ L+  F KEG  + A
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              L  M +D +  D+V Y++L++    ++  +KA  IF  + S G++ ++  Y TM+N 
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K K+  EA  L EEMR + + P+ V+YS+L++   +  +   AL +  EM++   P +
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + ++D   +      A  L  +++  GI P + +Y  L++   ++    +A ++F 
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K    +V  Y  MI+ +      +KA  L+ +M++ G  PNA TY  +I    +  
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKD 530

Query: 314 KLDRAAMLFQKLRSSGV 330
           + D A  L +++   G+
Sbjct: 531 ENDTAEKLLREMIVRGL 547



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 141/314 (44%), Gaps = 6/314 (1%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P    +N +L    +A+    A+ L + M+   IE +  T+N +I  + +   +  + ++
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             ++  +G  P AIT++T+I      G + +A     K+ + G  +D V Y T+I    +
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 347 VGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           VG +  A +LL     +L QPN +     I  + +A  + +A  ++ Q        D+  
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I  FS   K    I++F KM+     P+ +   ++++ + K  +   A  + + M 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 463 EEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
           ++  +  D V +  ++  Y +    N  + +F+ + S   I   +++  +   + +   +
Sbjct: 299 KDD-IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 522 NDASRIMNRMNKRR 535
           ++A  +   M  R+
Sbjct: 358 DEAINLFEEMRCRK 371


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 34/442 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
            AYN ++     A Q + A  L  EM    + PD YTY+TLI      G   +A++ L +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M + R   D+V Y+ L+E   K S Y +A+ +   ++  G  PD+V YN ++N   +   
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A   ++ +   G +P+TVSY+ +L       ++ +A  +  EM +  CP ++ T N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I    +  + + A  +   + K G  P+ +SYN LL  + + +   +A+    LM  + 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              ++V+YNT++    +S E + A  L+ +++++G  P  I+Y+T+I    KAGK   A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            L  ++ S G++ D + Y T+                                  L R  
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAG-------------------------------LCRED 326

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           RIE+A   F +  D G   +  ++  +I    + ++  + I++F  M   G  P+     
Sbjct: 327 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 386

Query: 440 LVLNSYGKLREFETADDLYSEM 461
           +++         + A DL  E+
Sbjct: 387 ILIEGLAYEGLIKEARDLLDEL 408



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 6/357 (1%)

Query: 122 PDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           PD   YNT+I  + G+ +      +L E +R + V PD V+Y+ LL    +   + +A+ 
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMK 88

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM +  C  D+ T N++++   Q     DA     ++   G +P+ VSYN +L+   
Sbjct: 89  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            AE + +A  L   M +K    NVVT+N +I    +    E A  +++++   G  PN++
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +Y+ ++  + K  K+D+A      + S G   D V Y T++ A  R G V  A  LLH+L
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           +     P  I   T I  L +AG+ +EA  +  +    G   DI  +  +     R  + 
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            + I  F K++  G  P++ +   ++    K RE  +A DL++ M   GC+ ++  +
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 385



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 178/364 (48%), Gaps = 11/364 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+LD +    R  P V  Y ++L    +   ++ A  L DEMR +G  PD  TY+ ++
Sbjct: 51  ALAVLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               +EG  D AI +L+ +       + V Y+ +++       +  A  +   +   G  
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V +N +I+   +  L + A  ++E++ + G  P+++SY+ LL+ + +  K  +A++ 
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229

Query: 182 FAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
              M    C  D+ + N ++      G++D+A +   L   ++  G  P ++SYNT++  
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE---LLHQLKDKGCAPVLISYNTVIDG 286

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +A    EA+ L   M  K ++ +++TY+T+     +    E A     ++Q+ GI PN
Sbjct: 287 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 346

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRL 356
            + Y+ II    K  +   A  LF  +  +G   +   Y  +I  +AYE  GL+  A+ L
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE--GLIKEARDL 404

Query: 357 LHEL 360
           L EL
Sbjct: 405 LDEL 408


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  SP  F Y  ++    R      A+ +F+ M  +G   +  +Y+T+I    + G  D
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             IS  ++M +D     +  Y+ +I          + + +F+ ++     P++  Y  M+
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K +   E+R ++ EM E+G+ P  V+Y+ L+  Y E  +   AL +   M   NC 
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCR 421

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + +      A  L   M +  + PS+V+YN+L+ V  +A  F  A  L
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             L++   +  +  TY+  I    KS   E+A +L   ++ +GI+ N + Y+ +I    K
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AGK+D A  L +++ S     +   Y ++I    + G V     ++  + +    P    
Sbjct: 542 AGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVAT 601

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            TIL     R G  + A  VF Q    G   D+  +   I  +  +        +  +M 
Sbjct: 602 YTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMI 661

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            AG  PDS    L++++Y +L     A ++   M + GC
Sbjct: 662 EAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 226/507 (44%), Gaps = 40/507 (7%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           + + ++  SV +YN +L  + R    +    ++ EM    I P+ YT +T++  + K G 
Sbjct: 170 DNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGN 229

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
              A  ++ ++ Q  +S D   Y++LI    + +D + A  +F+ + + G   + V+Y T
Sbjct: 230 IVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTT 289

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+   +A    E   L ++MRE    P   +Y+ +++    N + +E + +F EM E +
Sbjct: 290 IIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS 349

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  ++ T  +M+D   +     ++ R+   M + G+ PSVV+YN L+R Y E      A+
Sbjct: 350 CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAAL 409

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +  LM+      N  TYN +I  + K     KA  L+ +M    + P+ +TY+++I + 
Sbjct: 410 EILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQ 469

Query: 310 GKAGKLD-----------------------------------RAAMLFQKLRSSGVEIDP 334
            KAG  D                                    A  LF  L+  G++ + 
Sbjct: 470 CKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANE 529

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQ 390
           V+Y  +I  + + G +  A  LL  +   + +P  +    L     + G+++E   +   
Sbjct: 530 VMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVEN 589

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G    ++ +  +IE   R   + +   VF +M S G+ PD +     +++Y     
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQML 477
            + A+ + + M E G V  D + + +L
Sbjct: 650 VKEAEGMMARMIEAG-VMPDSLTYTLL 675



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 158/325 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  YN ++R      + E A  +   M      P+  TY+ LI  F K      A++ 
Sbjct: 387 PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTL 446

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M + +++  LV Y++LI +  K   +  A  +   LK +G+VPD   Y+  I+   K
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +K  +EA  L   ++E+G+K + V Y+ L++ + +  K  EA+S+   M+  +C  + +T
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSST 566

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I    +    ++   +  +M KMG+ P+V +Y  L+        F  A  +F  M 
Sbjct: 567 YNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV 626

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               + +V TY   I  Y  S   ++A  +M  M   G+ P+++TY+ +I+ + + G   
Sbjct: 627 SFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAY 686

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  + +++  +G +    ++  +I
Sbjct: 687 DAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/450 (20%), Positives = 192/450 (42%), Gaps = 44/450 (9%)

Query: 74  ISWLQQMEQDRVSGDLVL----YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           + +L+QM +D       L    Y+ L+ +  +     +   +++ + +  IVP++   NT
Sbjct: 160 LDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M+N + K     EA L + ++ + G+ PD+ +Y++L+  Y  N             N+VN
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRN-------------NDVN 266

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                                  A ++F  M   G   + VSY T++    EA    E I
Sbjct: 267 ----------------------SAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF+ M+  +    V TY  +I     +  + +  +L  EM+ R  EPN  TY+ ++   
Sbjct: 305 SLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAM 364

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K  KLD +  +  ++   G+    V Y  +I  Y   G +  A  +L  +   N  P E
Sbjct: 365 CKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNE 424

Query: 370 TA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 I   ++   + +A  +  +  ++     +  +  +I +  +   + +  ++ + 
Sbjct: 425 RTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDL 484

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           ++  G  PD    ++ +++  K +  E A DL++ ++E+G   ++ ++  ++  +     
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544

Query: 486 FNMLESLFERLDSDSNI-NKKELHHVVAGI 514
            +   SL ER+ S+  + N    + ++ G+
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGV 574



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 122/260 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E++ +PS+  YN ++    +A  ++ A+ L D +++ G+ PD++TYS  I    K    +
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      +++  +  + V+Y+ LI+   K     +AIS+  R+ S   +P+   YN++I
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K    +E   ++E M + GVKP   +Y+ L+   +    F  A  VF +M      
Sbjct: 572 YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T    I  Y      K+A+ +   M + G+ P  ++Y  L+  Y    L  +A ++
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNV 691

Query: 252 FRLMQRKEIEQNVVTYNTMI 271
            + M     + +   +N +I
Sbjct: 692 LKRMLDAGCDPSHPIWNNLI 711


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 224/487 (45%), Gaps = 47/487 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y  V+  + +AK+ + A  LF EM++ G+ PD YTY+ LI  F K G+ + A 
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           SW  +M     S ++V Y+ L+    K     +A  IF R+      P+ + Y+ +I+  
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567

Query: 135 GK-----------AKLFK-----EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            K           AKL       E+    E      + P+ V+Y  L+N   +  K  +A
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + ++D + ++     A  +F  M K G  PSV +Y +L+ R
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M +     NVVTY  M+    K+ E EKA NL+  M+ +G  P
Sbjct: 688 MFKDGRL-DLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I   GKAGK+D    LF ++++ G   + V Y+ +I      GL+  A  LL
Sbjct: 747 NVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLL 806

Query: 358 HELRQPN---------TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            E++Q +         T  +  +   LA  G +EE      ++ D   +    V+G +I+
Sbjct: 807 DEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEM-----ESHDTAPIA--PVYGMLID 859

Query: 409 LFSRNKKYANVIEVFEKM--------RSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            FS+  +    +E+ ++M         ++     S I AL L+S     + E A  LYSE
Sbjct: 860 SFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSS-----QVEEAVALYSE 914

Query: 461 MQEEGCV 467
           M+  G V
Sbjct: 915 MRRRGIV 921



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 220/485 (45%), Gaps = 31/485 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q E+A  +  EM   G   DR T  +      KEG +  A+
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDAL 259

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L   E++    D VL + +I    + S +++A+S   R++ +  +P++V Y T++  F
Sbjct: 260 DLL---EREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M  +G  P    +++L++ Y     +  A  +F  MN   CP   
Sbjct: 317 LKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGY 376

Query: 195 TTCNIMI-DVYGQLDMAKD-----ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + G+ ++        A++++  M       + ++     R       F +A
Sbjct: 377 VVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + + M RK    +  TY  +I    ++   +KA  L QEM+  G+ P+  TY+ +I  
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
           + KAG +++A   F ++RS+G   + V Y  ++ AY +   +  A  + H +      PN
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556

Query: 365 TIPRETAITILARAGRIEEATWVFRQA------------FDAGEVKDIS----VFGCMIE 408
            I     I  L +AG I++A  V+ +             F+  +   IS     +G ++ 
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVN 616

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              + +K ++  ++ + M +AG  P+  +   +++ + K+ E ++A +++  M +  C +
Sbjct: 617 GLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK--CGY 674

Query: 469 SDQVH 473
              VH
Sbjct: 675 LPSVH 679



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/506 (21%), Positives = 206/506 (40%), Gaps = 59/506 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQW------ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P    YN+ + ++   ++       +LA  +++EM       ++   +    C    G F
Sbjct: 374 PGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKF 433

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   +++M +     D   Y+ +I    +     KA  +F  +K  G+ PD+  Y  +
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA L ++A+   +EMR  G  P+ V+Y+ LL+ Y+++ +  +A  +F  M    C
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 191 PLDLTTCNIMID-------------VYGQLDMAKD---ADRLFWSMRKMGIDPSVVSYNT 234
             +  T + +ID             VY +L    D   +D  F       I P+VV+Y  
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGA 613

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+    +A+   +A  L   M     E N + Y+ ++  + K  E + A  +   M   G
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
             P+  TY+++I    K G+LD A  +  ++       + V Y  M+    + G    A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733

Query: 355 RLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            LL  + +    PN +     I  L +AG+++    +F Q    G   +   +  +I   
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793

Query: 411 SR---------------------------------NKKYANVIEVFEKMRSAGYFPDSHI 437
                                              +K++   + + E+M S    P + +
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPV 853

Query: 438 IALVLNSYGKLREFETADDLYSEMQE 463
             ++++S+ K    ETA +L+ EM E
Sbjct: 854 YGMLIDSFSKAGRLETALELHKEMME 879



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 199/463 (42%), Gaps = 71/463 (15%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V+ Y +++ +  +A   E A   FDEMR  G +P+  TY+ L+  + K      A  
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL----------------KSSG 119
              +M  D    + + YS LI+   K  +  KA  ++++L                 +  
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I P++V Y  ++N   KA+   +A  L++ M   G +P+ + Y  L++ + +  +   A 
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL- 235
            VF  M +      + T   +ID     G+LD+A    ++   M K   +P+VV+Y  + 
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM---KVLSQMLKDSCNPNVVTYTAMV 720

Query: 236 --LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
             L   GE E   +A++L  LM++K    NVVTY  +I   GK+ + +    L  +M+ +
Sbjct: 721 DGLCKTGETE---KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTK 777

Query: 294 GIEPNAITYSTIIAIWGKAG------------KLDRAAMLFQKLRSS------------- 328
           G  PN +TY  +I     AG            K        Q  R++             
Sbjct: 778 GCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG 837

Query: 329 ---------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRE---TAI 372
                       I PV Y  +I ++ + G +  A  L  E+ +     N   ++   + I
Sbjct: 838 LLEEMESHDTAPIAPV-YGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLI 896

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNK 414
             L  + ++EEA  ++ +    G V D+S F C+++ L  RNK
Sbjct: 897 QALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNK 939



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/372 (21%), Positives = 159/372 (42%), Gaps = 13/372 (3%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + +A+    RLK  G  P  V YN ++ V   A   + A  + +EM   G   D  +  +
Sbjct: 185 WGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGS 244

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
                 +  ++ +AL +   +   +  LD   C  MI    +  +  +A      MR   
Sbjct: 245 FAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNS 301

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P+VV+Y TLL  + + +  G    +  +M  +    +   +N+++  Y  + ++  A 
Sbjct: 302 YIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAY 361

Query: 285 NLMQEMQNRGIEPNAITYSTII-AIWGK-----AGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            L   M   G  P  + Y+  I +I G+        LD A  +++++  +   ++ +   
Sbjct: 362 KLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTA 421

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDA 394
                   VG    A +++ E+ +   +P  +     IT L +A R+++A  +F++    
Sbjct: 422 NFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKV 481

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+  +  +I+ F +          F++MRSAG  P+      +L++Y K ++   A
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQA 541

Query: 455 DDLYSEMQEEGC 466
           +D++  M  + C
Sbjct: 542 NDIFHRMVGDAC 553



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 141/321 (43%), Gaps = 5/321 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+   Y+ ++    +  + + A  +F  M + G  P  +TY++LI    K+G  D 
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L QM +D  + ++V Y+ +++   K  +  KA+++ S ++  G  P++V Y  +I+
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALID 756

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA        L  +M+ +G  P+ V+Y  L+N         +A  +  EM + + P 
Sbjct: 757 GLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPK 816

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L      +  + +  +A     L   M      P    Y  L+  + +A     A+ L 
Sbjct: 817 YLQGYRTTVQGFSKRFLASLG--LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELH 874

Query: 253 RLMQRKEIEQNVVT---YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           + M       N+ +   + ++I+    S + E+A  L  EM+ RGI P+   +  ++   
Sbjct: 875 KEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGL 934

Query: 310 GKAGKLDRAAMLFQKLRSSGV 330
            +  K + A  L   +   GV
Sbjct: 935 IERNKWNEALQLCYGICQEGV 955



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 40/244 (16%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+   SP+V  Y  ++  + +A + +    LF +M+ +G AP+  TY  LI      G+ 
Sbjct: 740 EKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLL 799

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L +M+Q                 + L  Y   +  FS                 
Sbjct: 800 DDAHLLLDEMKQ-------------THWPKYLQGYRTTVQGFS----------------- 829

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                  K F  +  L+EEM      P    Y  L++ + +  +   AL +  EM EV+ 
Sbjct: 830 -------KRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSS 882

Query: 191 PLDLTTCNIMIDVYGQLDMA---KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            L++ + ++   +   L ++   ++A  L+  MR+ GI P + ++  L++   E   + E
Sbjct: 883 SLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNE 942

Query: 248 AIHL 251
           A+ L
Sbjct: 943 ALQL 946


>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
 gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
          Length = 637

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 19/428 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S + Y  +++  LR+++      +++EMR++G   D + Y+ L+    K GM D A    
Sbjct: 185 SGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVF 244

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+Q     D   Y+ LI ++ K    SK +S F  + S G V +L+A+NT+I   GK 
Sbjct: 245 EDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKN 304

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN---HKFVEALSVFAEMNEVNCPLDL 194
           K+  +   ++ +M E   +P+  +YS  L++       H+  E L + +        ++ 
Sbjct: 305 KMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRF------MNR 358

Query: 195 TTCNIMIDVYGQLDMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           +  + ++    +   A +A  +F   W+  + G   + VS   +L V   AE   EAI L
Sbjct: 359 SIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVS---MLEVLCNAEKTLEAIDL 415

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M  K I  +V  YN +    GK  +    +NL  +M+  GI P+  TY+ +I+ +G+
Sbjct: 416 LHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGR 475

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G +D+A+ LF+ + +S  + D V Y ++I    + G +  A  L  E+++    P+   
Sbjct: 476 VGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFT 535

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I    ++ ++E A  +F +    G   +I  +  +++   R  K     +++E M+
Sbjct: 536 YSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 595

Query: 428 SAGYFPDS 435
             G  PDS
Sbjct: 596 QQGLIPDS 603



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 35/404 (8%)

Query: 9   INEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           + EE R   Y   +FAYN++L  + +A   + A  +F++M+Q+   PD YTY+ LI   G
Sbjct: 208 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSG 267

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G     +S+  +M       +L+ ++ +IE   K     K I + S++  +   P+  
Sbjct: 268 KAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQF 327

Query: 126 AYNTMINVFG--------------------------------KAKLFKEARLLIEEMREQ 153
            Y+  +++                                  K+    EA  +   M   
Sbjct: 328 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 387

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
             K D  ++ ++L +     K +EA+ +   M E     D+   N++    G+L      
Sbjct: 388 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 447

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M+  GI P V +YN ++  YG   L  +A  LF +M+    + +VVTYN++I  
Sbjct: 448 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 507

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK  + ++A  L +EMQ +G +P+  TYS +I  +GK+ K++ A  LF ++ S G   +
Sbjct: 508 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 567

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            V Y  ++   ER G    A +L   ++Q   IP     +IL R
Sbjct: 568 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILER 611



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 35/220 (15%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN+V   + + KQ      LFD+M+  GI PD +TY+ +I+ +G+ G+ D       
Sbjct: 428 VGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD------- 480

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
                                       KA  +F  +++S   PD+V YN++IN  GK  
Sbjct: 481 ----------------------------KASELFEVMEASSCKPDVVTYNSLINCLGKHG 512

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA +L +EM+E+G  PD  +YS L+  + +++K   A S+F EM    C  ++ T N
Sbjct: 513 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 572

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           I++D   +    ++A +L+ +M++ G+ P  ++Y+ L R+
Sbjct: 573 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERL 612



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 129/256 (50%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++++ ++     AH +F  M       DR  + +++           AI  L  M 
Sbjct: 361 YSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMP 420

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+ +Y+ +     KL   S   ++F ++K++GI+PD+  YN MI+ +G+  L  
Sbjct: 421 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 480

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L E M     KPD V+Y++L+N   ++    EA  +F EM E     D+ T +I+I
Sbjct: 481 KASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILI 540

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +  + A  LF  M   G  P++V+YN LL          EA  L+  M+++ + 
Sbjct: 541 ECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLI 600

Query: 262 QNVVTYNTMIKIYGKS 277
            + +TY+ + ++  +S
Sbjct: 601 PDSITYSILERLESRS 616



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/382 (19%), Positives = 170/382 (44%), Gaps = 7/382 (1%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G++    +Y  ++  ++ + +  +   V+ EM      LD+   N+++D   +  M   A
Sbjct: 181 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 240

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            ++F  M++    P   +Y  L+R+ G+A    + +  F  M  K    N++ +NT+I+ 
Sbjct: 241 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 300

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK+   +K   ++ +M     +PN  TYS  + I    G+L R   L + L      ++
Sbjct: 301 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR---LNEVLDICSRFMN 357

Query: 334 PVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +Y  ++ +  + G  + A     R+ +   + +     + + +L  A +  EA  +  
Sbjct: 358 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 417

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              + G V D+ ++  +     + K+ + +  +F+KM++ G  PD     ++++SYG++ 
Sbjct: 418 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 477

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + A +L+  M+   C      +  +++  G   D +    LF+ +           + 
Sbjct: 478 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 537

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           ++   + ++N++  A  + + M
Sbjct: 538 ILIECFGKSNKVEMACSLFDEM 559



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 84/160 (52%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF YN+++ +  R    + A  LF+ M      PD  TY++LI C GK G  D A   
Sbjct: 461 PDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHML 520

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M++     D+  YS LIE   K +    A S+F  + S G  P++V YN +++   +
Sbjct: 521 FKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLER 580

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
               +EA  L E M++QG+ PD+++YS L  L   + + V
Sbjct: 581 RGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRTV 620


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 8/458 (1%)

Query: 26   LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
            LR+ L   +++ A GLF EM Q    P    ++ ++T   K   FD  I    +ME   +
Sbjct: 587  LRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGI 646

Query: 86   SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
            S DL  ++ LI    + S +S A+++  ++   G  P +V   +++N F +   F+EA  
Sbjct: 647  SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 146  LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            L++ M E G++P+ V Y+T++N   +N     AL +F  M +     D  T N +I    
Sbjct: 707  LVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLC 766

Query: 206  QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                  DA RL   M K  IDP+V+ +  L+  + +     EA +L++ M R+ +  N++
Sbjct: 767  NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826

Query: 266  TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            TYN++I  +        A ++   M ++G  P+ +TY+T+I  + K+ +++    LF ++
Sbjct: 827  TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886

Query: 326  RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
               G+  D   Y T+I  Y + G +  A+++ + +      P+ +     +  L   G+I
Sbjct: 887  THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946

Query: 382  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            E+A  +           DI  +  +I+   RN K      +F  +   G   D+  IA +
Sbjct: 947  EKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA--IAYI 1004

Query: 442  LNSYGKLREF--ETADDLYSEMQEEGCVFSDQVHFQML 477
                G  R      AD L + M+E+G + S++++ + L
Sbjct: 1005 TMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 212/430 (49%), Gaps = 4/430 (0%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            ++R  PS+  +  VL  + +  ++++   LF +M   GI+ D Y+++ LI CF +   F 
Sbjct: 608  QSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFS 667

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A++ L +M +      +V   +L+    + + + +A+S+   +   G+ P++V YNT+I
Sbjct: 668  LALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVI 727

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            N   K +    A  +   M ++G+  D V+Y+TL++    + ++ +A  +  +M +    
Sbjct: 728  NGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKID 787

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             ++     +ID + +     +A  L+  M +  + P++++YN+L+  +      G+A H+
Sbjct: 788  PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHM 847

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            F LM  K    +VVTYNT+I  + KS   E    L  EM ++G+  +A TY+T+I  + +
Sbjct: 848  FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIP 367
            AGKL+ A  +F ++   GV  D V Y  ++      G +  A  ++ +L++     + I 
Sbjct: 908  AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 368  RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                I  + R  +++EA  +FR     G   D   +  MI    RN       ++  +M+
Sbjct: 968  YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 428  SAGYFPDSHI 437
              G+ P   I
Sbjct: 1028 EDGFMPSERI 1037



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 204/447 (45%), Gaps = 17/447 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           L + ++E A  LF EM Q    P    ++ L+T       +++ I + QQME   +S DL
Sbjct: 41  LHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDL 100

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             ++ LI    + S  S A+SI  ++   G  P +V + ++++ F       +A  L+  
Sbjct: 101 YSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVAS 160

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMIDVYGQLD 208
           M + G +P+ V Y+TL++   +N     AL +  EM +      DL T N ++       
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             + A R+   M K  I+P V ++  L+  + +     EA  L++ M +  I  N VTYN
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280

Query: 269 TMIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           ++I    ++G+ L H K T     M ++G  PN +TY+T+I  + K+ +++    LFQ++
Sbjct: 281 SLINGLCMHGR-LYHAKKT--FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRI 381
              G+  D   Y T+I  Y +VG +  AK +   +      P      IL       G I
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH---II 438
             A   F       +   I  +  MI    +  K     E+F ++   G  PD+    I+
Sbjct: 398 GSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIM 457

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            L L   G  RE   AD+L+  M+E+G
Sbjct: 458 ILGLCKNGPRRE---ADELFRRMKEDG 481



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 192/422 (45%), Gaps = 11/422 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  +  +L  +   +++E       +M   GI+ D Y+++ LI CF +      A+S 
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 77  LQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           L +M +      +V + +L+    L  ++ D   A S+ + +  SG  P++V YNT+I+ 
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHD---AFSLVASMVKSGYEPNVVVYNTLIDC 179

Query: 134 FGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             K      A  L+ EM ++G +  D V+Y+TLL     + ++ +A  +  +M +     
Sbjct: 180 LCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T   +ID + +     +A  L+  M +  I P+ V+YN+L+           A   F
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF 299

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  K    NVVTYNT+I  + KS   E    L Q M   G+  +  TY+T+I  + + 
Sbjct: 300 DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQV 359

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPR 368
           GKL  A  +F  + S GV  D + +  ++      G +  A    +++R        +  
Sbjct: 360 GKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAY 419

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I  L +A ++EEA  +F +    G   D   +  MI    +N       E+F +M+ 
Sbjct: 420 NIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479

Query: 429 AG 430
            G
Sbjct: 480 DG 481



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 131/600 (21%), Positives = 250/600 (41%), Gaps = 69/600 (11%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L+ + ++ R +  +  YN +L  +  + +W  A  +  +M +R I PD +T++ LI
Sbjct: 189 ALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALI 248

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F K+G  D A    +QM Q  +  + V Y++LI           A   F  + S G  
Sbjct: 249 DAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF 308

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNT+IN F K++  ++   L + M  +G+  DT +Y+TL++ Y +  K   A  +
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 182 FAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           F+ M       D+ T  I++    V G++  A      F  MR       +V+YN ++  
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK---FNDMRSGEKYLGIVAYNIMIHG 425

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI--- 295
             +A+   EA  LF  +  + ++ +  TY  MI    K+    +A  L + M+  GI   
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQ 485

Query: 296 ----------EPNAITYSTIIAIWGKAGKLDRAAMLF-----QKLRSSGVEIDPVLYQTM 340
                       N ++  TII    +   +  +  L+       L SS V + P+   + 
Sbjct: 486 AEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSS 545

Query: 341 IVAYERVGLV--------------------------AHAKRL---LH------------E 359
           +  + R  L+                           + +RL   LH            E
Sbjct: 546 VKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCE 605

Query: 360 LRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + Q   IP        +T +A+  + +   ++F +  + G   D+  F  +I  F R  +
Sbjct: 606 MLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSR 665

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
           ++  + +  KM   G+ P    +  +LN + +   F+ A  L   M E G   +  ++  
Sbjct: 666 FSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNT 725

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           +++     +D N    +F  ++    +     ++ +      + R  DA+R++  M KR+
Sbjct: 726 VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 7/323 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMF 70
           ++ Y P+V  YN ++  + +     +A  L +EM ++G +A D  TY+TL+T     G +
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L+ M + R++ D+  ++ LI+   K  +  +A  ++ ++  S I P+ V YN++
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN          A+   + M  +G  P+ V+Y+TL+N + ++ +  + + +F  M     
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAELFGE 247
             D  T N +I  Y Q+   + A  +F  M   G+ P ++++  LL    V GE    G 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE---IGS 399

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+  F  M+  E    +V YN MI    K+ + E+A  L   +   G++P+A TY+ +I 
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459

Query: 308 IWGKAGKLDRAAMLFQKLRSSGV 330
              K G    A  LF++++  G+
Sbjct: 460 GLCKNGPRREADELFRRMKEDGI 482



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 5/355 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS+  +  +L       +   A  L   M + G  P+   Y+TLI C  K G  + A+
Sbjct: 131 YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIAL 190

Query: 75  SWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             L +ME + R++ DLV Y+ L+       ++ +A  I   +    I PD+  +  +I+ 
Sbjct: 191 ELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDA 250

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K     EA+ L ++M +  + P+TV+Y++L+N    + +   A   F  M    C  +
Sbjct: 251 FVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPN 310

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I+ + +    +D  +LF  M + G+     +YNTL+  Y +      A  +F 
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFS 370

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP--NAITYSTIIAIWGK 311
            M    +  +++T+   I ++G  +  E  + +++    R  E     + Y+ +I    K
Sbjct: 371 WMVSCGVTPDIITH--CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           A K++ A  LF +L   GV+ D   Y  MI+   + G    A  L   +++   I
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 122/558 (21%), Positives = 220/558 (39%), Gaps = 95/558 (17%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            + AYN+++  + +A + E A  LF  +   G+ PD  TY+ +I    K G    A    
Sbjct: 415 GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELF 474

Query: 78  QQMEQDRV-------------SGDLVLYSNLIELARK---------LSDYSKAISIFSRL 115
           ++M++D +             + + V    +I   ++         L  Y    +++S L
Sbjct: 475 RRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSL 534

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL--------- 166
              G++P  +A ++ +  F +  L          + E+G  P++ S+S            
Sbjct: 535 --VGLIP--IASSSSVKGFVRRHLL---------LLERGNNPESRSFSGASHHHHHHHHH 581

Query: 167 ----NLYVENH--KFVEALSVFAEM---NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
                L  E H  KF +A  +F EM     +   +D T     I    + D+      LF
Sbjct: 582 HYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVI---YLF 638

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M  +GI   + S+  L+  +     F  A+ L   M +   + ++VT  +++  + + 
Sbjct: 639 HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++A +L+  M   G+EPN + Y+T+I    K   L+ A  +F  +   G+  D V Y
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I      G    A RLL ++ +    PN I     I    + G + EA  ++++   
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +I  +  +I  F    +  +   +F+ M S G FPD      ++  + K +  E 
Sbjct: 819 RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
              L+ EM  +G             L G    +N L                 +H     
Sbjct: 879 GMKLFCEMTHQG-------------LVGDAFTYNTL-----------------IHG---- 904

Query: 514 IYERANRLNDASRIMNRM 531
            Y +A +LN A ++ NRM
Sbjct: 905 -YCQAGKLNVAQKVFNRM 921



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 121/268 (45%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            +  P+V  +  ++   ++      A  L+ EM +R + P+  TY++LI  F  +G    A
Sbjct: 785  KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                  M       D+V Y+ LI    K       + +F  +   G+V D   YNT+I+ 
Sbjct: 845  KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            + +A     A+ +   M + GV PD V+Y+ LL+    N K  +AL +  ++ +    +D
Sbjct: 905  YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + T NI+I    + D  K+A  LF S+ + G+    ++Y T++       L  EA  L  
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024

Query: 254  LMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             M+      +   Y+  ++ +  SL  E
Sbjct: 1025 RMKEDGFMPSERIYDETLRDHYTSLSAE 1052


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 187/375 (49%), Gaps = 20/375 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM++ GIAPD Y Y+TLI  F K G  + A 
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +W  +ME+D  + ++V Y+ LI    K    SKA  ++  + S G  P++V Y  +I+  
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 135 GKAKLFKEARLLIEEMREQGV-----------------KPDTVSYSTLLNLYVENHKFVE 177
            KA   ++A  + + M+++ V                 +P+  +Y  L++   + ++  E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL- 236
           A  +   M+   C  +    + +ID   +     +A  +F +M + G DP+V +Y++L+ 
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
           R++ +  L   A+ +   M       NVV Y  MI    K  + ++A  LM  M+ +G  
Sbjct: 458 RLFKDKRL-DLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCN 516

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN +TY+ +I  +GK+G++++   L Q++ S G   + V Y+ +I      GL+  A +L
Sbjct: 517 PNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKL 576

Query: 357 LHELRQPNTIPRETA 371
           L E++Q    PR  A
Sbjct: 577 LEEMKQ-TYWPRHVA 590



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 206/457 (45%), Gaps = 29/457 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQ-----WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           P    YN+++  +  +++      +LA   + EM + G+  ++   S    C    G F+
Sbjct: 145 PGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFE 204

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A + +++M       D   YS +I      S   KA  +F  +K +GI PD+  Y T+I
Sbjct: 205 KAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLI 264

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F KA   ++AR   +EM   G  P+ V+Y+ L++ Y+++ K  +A  V+  M    C 
Sbjct: 265 DSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCT 324

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID-PSVVSYNTLLRVYGEAELFGEAIH 250
            ++ T   +ID   +    + A +++  M+K  ++ P V                   +H
Sbjct: 325 PNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV------------------DMH 366

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR++     E NV TY  ++    K+ + ++A +L++ M   G EPN + Y  +I    
Sbjct: 367 -FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCC 425

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA-KRLLHELRQPNTI 366
           KAGKLD A  +F  +   G + +   Y ++I      +R+ L      ++L     PN +
Sbjct: 426 KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVV 485

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L + G+ +EA  +     + G   ++  +  MI+ F ++ +    +E+ ++M
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            S G  P+     +++N        + A  L  EM++
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/550 (22%), Positives = 232/550 (42%), Gaps = 28/550 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT-CFGKEGM 69
           E+  + P    Y  ++  +  A  +E A      MR     P+  TY  L+  C  KE +
Sbjct: 34  EKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKL 93

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
                  L  M  +       ++++L+    +  DY+ A  +  ++   G  P  V YN 
Sbjct: 94  -GRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNI 152

Query: 130 MI-NVFGKAKLFKEARLLIE----EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           +I  +    +  K+   L E    EM E GV  + V+ S          KF +A +V  E
Sbjct: 153 LIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIRE 212

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D +T + +I         + A +LF  M++ GI P V  Y TL+  + +A  
Sbjct: 213 MMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGF 272

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A + F  M+R     NVVTY  +I  Y KS +  KA  + + M ++G  PN +TY+ 
Sbjct: 273 IEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTA 332

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV-----------------LYQTMIVAYERV 347
           +I    KAGK+++A+ +++ ++   VEI  V                  Y  ++    + 
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
             V  A+ LL  +     +PN +  +  I    +AG+++EA  VF    + G   ++  +
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   ++K+    ++V  KM      P+  I   +++   K+ + + A  L   M+E
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE 512

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
           +GC  +   +  M+  +G          L +++ S         + V+         L++
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDE 572

Query: 524 ASRIMNRMNK 533
           A +++  M +
Sbjct: 573 AHKLLEEMKQ 582



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 163/395 (41%), Gaps = 26/395 (6%)

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            A  L    K     S L+    VPD V Y  MI+   +A LF+EA   +  MR     P
Sbjct: 16  FAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           + ++Y  LL   +   K      + + M    C       N ++  Y +      A +L 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFG-EAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
             M + G  P  V YN L+     +E  G + + L      + +E  VV     I  + +
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195

Query: 277 SL----EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            L    + EKA N+++EM ++G  P+  TYS +I     A K+++A  LFQ+++ +G+  
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           D  +Y T+I ++ + G +  A+    E+ +    PN +     I    ++ ++ +A  V+
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR-----------------SAGY 431
                 G   +I  +  +I+   +  K     ++++ M+                  A  
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            P+      +++   K  + + A DL   M  EGC
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 10/322 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+VF Y  ++  + +A Q + A  L   M   G  P+   Y  LI    K G  D 
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A      M +     ++  YS+LI+   K      A+ + S++  +   P++V Y  MI+
Sbjct: 433 AQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMID 492

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K     EA  L+  M E+G  P+ V+Y+ +++ + ++ +  + L +  +M+   C  
Sbjct: 493 GLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP 552

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL- 251
           +  T  ++I+      +  +A +L   M++      V  Y  ++  +     F  +++L 
Sbjct: 553 NFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLS 610

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP----NAITYSTIIA 307
           F + +   +    V Y  +I  + K+   E A  L +E+ +    P    N   + T+I 
Sbjct: 611 FEISENDSVPVAPV-YRVLIDNFIKAGRLEIALELNEELSS--FSPFSAANQNIHITLIE 667

Query: 308 IWGKAGKLDRAAMLFQKLRSSG 329
               A K D+A  L+  + S G
Sbjct: 668 NLSLAHKADKAFELYADMISRG 689



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 2/176 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P+V+ Y+ ++  + + K+ +LA  +  +M +   AP+   Y+ +I    K G  D
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +  ME+   + ++V Y+ +I+   K     K + +  ++ S G  P+ V Y  +I
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N      L  EA  L+EEM++         Y  ++  +  N +F+ +L +  E++E
Sbjct: 562 NHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISE 615



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P+V  Y  ++    ++ + E    L  +M  +G AP+  TY  LI      G+ 
Sbjct: 511 EEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLL 570

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L++M+Q      +  Y  +IE   +  ++  ++ +   +  +  VP    Y  +
Sbjct: 571 DEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EFIASLYLSFEISENDSVPVAPVYRVL 628

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN----HKFVEALSVFAEM 185
           I+ F KA   + A  L EE+      P + +   +    +EN    HK  +A  ++A+M
Sbjct: 629 IDNFIKAGRLEIALELNEEL--SSFSPFSAANQNIHITLIENLSLAHKADKAFELYADM 685


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 218/455 (47%), Gaps = 15/455 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P VFA+N V++   R+   E A  ++  M + G  PD  +Y  LI    K G  D 
Sbjct: 39  AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE 98

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           ++  L +M     +  +  YS+L+    K      A S+F  +   G  PD + +  +I 
Sbjct: 99  SLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELIL 158

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A   K+A    ++M + G +P+   Y+ LL+    + +  +A ++FAEM   +C  
Sbjct: 159 GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T N ++D   +    ++  +LF +MR  G  P+V++++TL+          +A+ +F
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M     + N  TY T+I    ++ +  +A  L ++M    I P+A+ Y+++IA + K 
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338

Query: 313 GKLDRAAMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           G +D A  L++++ S G  + P  V + T+I  + ++G +  A  L+ E+       ++ 
Sbjct: 339 GSMDEAEKLYREM-SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC 397

Query: 367 PRETAITILARAGRIEEATWVFRQ----AFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
                I  L+RA +++EA  V++Q     F    V  +S  G + +  + ++ YA    V
Sbjct: 398 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA----V 453

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           FE  R +G  P+     ++  S  KL   E A  L
Sbjct: 454 FEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 214/466 (45%), Gaps = 6/466 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +VF Y+ +++++++  + E ++ + +EM   G  PD + ++ ++  F +    + A    
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           Q M +     D V Y  LI    K+    +++ I S +   G  P + AY++++    KA
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +    A  L +EM   G  PD + +  L+    +  K  +A   F +M +  C  ++   
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+++         + A+ LF  M+     P VV+YNTLL    +A    E   LF  M+ 
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                NV+T++T+I    ++ E EKA  +   M   G +PN  TY+T+I+   +A K+ +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTIPRETAI 372
           A  LF+K+  + +  D V Y ++I  Y + G +  A++L  E+      QP  +   T I
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               + G++  A  +  +    G   D   +  +I   SR  K    +EV+++MR   + 
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            D       +    K    + A  ++   ++ G V + +  F++LS
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET-FRILS 473



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/495 (23%), Positives = 221/495 (44%), Gaps = 5/495 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           MR + IA + +TYS++I    KE   + +   L++M     + D+  ++ +++   + ++
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             KA  ++  +  SG  PD V+Y+ +I+   K     E+  ++ EM  +G  P   +YS+
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+    +  +   A S+F EM       D      +I    Q    KDA   F  M K G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P+V  YN LL     +    +A  LF  M+      +VVTYNT++    K+   E+  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L + M+  G  PN IT+ST+I    + G+L++A  +F  +  +G + +   Y T+I   
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ-AFDAGEVKD 399
            R   V  A+ L  ++ Q    P+ +   + I    + G ++EA  ++R+ +  AG    
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I  F  +I+ F +  K     E+  +M + G   DS    +++    +  + + A ++Y 
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           +M+E+  +         +       + +   ++FE       +   E   +++    +  
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 520 RLNDASRIMNRMNKR 534
           R+ DA ++M     R
Sbjct: 481 RVEDAQKLMEPAKAR 495



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 63/143 (44%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P++  +N ++    +  +   A+ L  EM  +G+A D  TY  LI    +    D 
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+   +QM + +   D V   + +    K  +  +A ++F   + SG VP+   +  +  
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 133 VFGKAKLFKEARLLIEEMREQGV 155
              K    ++A+ L+E  + + +
Sbjct: 475 SLIKLGRVEDAQKLMEPAKARDI 497


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 186/369 (50%), Gaps = 14/369 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +  ++  + R  +   A  L D M + G+ P++ TY T++    K G   SA++ 
Sbjct: 79  PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138

Query: 77  LQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L++ME+   +  D+V+YS +I+   K   ++ A ++F  ++  GI PD+V Y+ MIN F 
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDL 194
            +  + EA+ L++EM  + + PD V++S L+N  V+      A  +  EM     CP ++
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP-NV 257

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKM-----------GIDPSVVSYNTLLRVYGEAE 243
            TCN ++D        KDA  +F +M+K            G++P V +YN L+       
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
            F EA  L+  M  + I  + VTY++MI    K    ++AT +   M ++   PN +T++
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFN 377

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I  + KAG +D    LF ++   G+  + + Y T+I  + +VG +  +  +  E+   
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437

Query: 364 NTIPRETAI 372
              P    I
Sbjct: 438 GVYPDTITI 446



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +L  + E +   P V  Y+ ++  + +  +   A  LF EM+ +GI PD  TYS +I
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F   G +  A   LQ+M   ++S D+V +S LI    K  D + A  +   + SSG+ 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMRE-----------QGVKPDTVSYSTLLNLYV 170
           P++V  NT+++    +   K+A  + + M++            GV+PD  +Y+ L++  +
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              KF+EA  ++ EM       D  T + MI+   +     +A ++F SM      P++V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           ++NTL+  Y +A +  + + LF  M R+ I  N +TY T+I+ + K      + ++ QEM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 291 QNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSS 328
            + G+ P+ IT   ++  +W K  +L RA  + ++L+ S
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKE-ELKRALAMLEELQMS 472



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 222/480 (46%), Gaps = 28/480 (5%)

Query: 50  IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           I  D Y+++ LI CF        A+S   ++ +      LV ++ L+         S+A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +F ++      P++V + T++N   +     EA  L++ M E G++P+ ++Y T+++  
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 170 VENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            +    V AL++  +M E+ +   D+   + +ID   +     DA  LF  M+  GI P 
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           +V+Y+ ++  +  +  + EA  L + M  ++I  +VVT++ +I    K  +   A +L+Q
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS-----------GVEIDPVLY 337
           EM + G+ PN +T +T++     +GKL  A  +F+ ++ S           GVE D   Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I      G    A+ L  E+      P+T+   + I  L +  R++EAT +F     
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +I  F  +I  + +     + +E+F +M   G   ++     ++  + K+     
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 454 ADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
           + D++ EM   G V+ D +  + ML+   ++++     ++ E L    +      HH+V 
Sbjct: 427 SLDIFQEMISSG-VYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMD------HHLVG 479



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 123/282 (43%), Gaps = 13/282 (4%)

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +I  ++ ++N +IK +    +   A +   ++   G  P  +T++T++       ++  A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITI 374
             LF ++    V    V + T++    R G V  A     R++ +  QPN I   T +  
Sbjct: 70  LDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           + + G    A  + R+  +   +K D+ ++  +I+   ++ ++ +   +F +M+  G FP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESL 492
           D    + ++N +    ++  A  L  EM     +  D V F  +++      D N  + L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK-ISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 493 F-ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             E + S    N    + ++ G+ + + +L DA  +   M K
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCD-SGKLKDALEMFKAMQK 285


>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 875

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 237/488 (48%), Gaps = 13/488 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S   YN ++    +A Q + A  +F EM ++ I P   T++T+I   G +G  +    
Sbjct: 327 SLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVAL 386

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +Q+ME+ R   D   Y+ LI +  K +D + A S F R+K   + PDLV+Y T++  F 
Sbjct: 387 LMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFS 446

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDL 194
              +  +A  L+ EM E+G++ D  + S L  +Y+E     ++   F   +   N   + 
Sbjct: 447 IRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSEC 506

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N  ID YG+    K+A R+F + R      +V+ +N +++ YG  + + +A  LF  
Sbjct: 507 YSAN--IDAYGERGHVKEAARVF-ACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDLFDS 563

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +  +  +Y+++++I   +   +KA + +++MQ  G+  + + Y  +I+ + K GK
Sbjct: 564 MESHGVVPDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGK 623

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRET 370
           L+ A  +++++    V+ D ++Y  +I A+   G V  A   +  ++      NT+   +
Sbjct: 624 LEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNS 683

Query: 371 AITILARAGRIEEA--TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            I +  + G + EA  T+   Q+ D G   +     CMI+L+S         E+FE M+ 
Sbjct: 684 LIKLYTKVGYLREAQETYKLLQSSDVG--PETYSSNCMIDLYSEQSMVKPAEEIFESMKR 741

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            G   +    A++L  Y +L  FE A  +  +M+E G +     +  +L LY     F  
Sbjct: 742 KGD-ANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALDGRFKE 800

Query: 489 LESLFERL 496
               F+ +
Sbjct: 801 AVGTFKEM 808



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 257/589 (43%), Gaps = 59/589 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W      Y  +V  YN+++R + +AKQW     L +EM  + I+P   TY TL
Sbjct: 186 RAMEIFEWFKSRGCYELNVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTL 245

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFS------- 113
           I  + K G+ + A+ WL++M +  +  D V    ++++ +K  ++ KA   F        
Sbjct: 246 IDVYSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREA 305

Query: 114 -RLKSSGIVPDLV-------------AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
            R K +G     V              YNTMI+ +GKA   KEA  +  EM  + + P T
Sbjct: 306 LRHKVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTT 365

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V+++T++++     +  E   +  +M E+ CP D  T NI+I ++ + +    A   F  
Sbjct: 366 VTFNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKR 425

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M+K  + P +VSY TLL  +    +  +A +L   M  K IE +  T + + ++Y ++  
Sbjct: 426 MKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGM 485

Query: 280 HEK----------ATNLMQEMQN--------RG------------IEPNAIT---YSTII 306
            EK          A N+  E  +        RG            +E N +T   ++ +I
Sbjct: 486 LEKSWLWFWRFHLAGNMSSECYSANIDAYGERGHVKEAARVFACRLEQNKLTVLEFNVMI 545

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP--- 363
             +G     ++A  LF  + S GV  D   Y +++       L   AK  L ++++    
Sbjct: 546 KAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLV 605

Query: 364 -NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            + +     I+   + G++E A  V+++        DI V+G +I  F+ +      I  
Sbjct: 606 SDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISY 665

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
            + M+ AG   ++ I   ++  Y K+     A + Y  +Q             M+ LY  
Sbjct: 666 IDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETYSSNCMIDLYSE 725

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +      E +FE +    + N+   + ++  +Y+R      A +I  +M
Sbjct: 726 QSMVKPAEEIFESMKRKGDANEF-TYAMMLCMYKRLGWFEQAIQIAKQM 773



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 1/296 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  +NV+++     K +E A  LFD M   G+ PD+ +YS+L+       + D A  +L
Sbjct: 537 TVLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYL 596

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++M++  +  D V Y  +I    KL     A  ++  +    + PD++ Y  +IN F  +
Sbjct: 597 KKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADS 656

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              KEA   I+ M+  G+  +TV Y++L+ LY +     EA   +  +   +   +  + 
Sbjct: 657 GCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETYSS 716

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M K A+ +F SM++ G D +  +Y  +L +Y     F +AI + + M+ 
Sbjct: 717 NCMIDLYSEQSMVKPAEEIFESMKRKG-DANEFTYAMMLCMYKRLGWFEQAIQIAKQMRE 775

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +   +++YN ++ +Y      ++A    +EM   GI+P+  T+ ++  +  K G
Sbjct: 776 LGLLTYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTFKSLGIVLVKCG 831



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 195/434 (44%), Gaps = 60/434 (13%)

Query: 100 RKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           ++   + +A+ IF   KS G    +++ YN MI + GKAK ++    L  EM  + + P 
Sbjct: 179 KEQCSWERAMEIFEWFKSRGCYELNVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPI 238

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF- 217
             +Y TL+++Y +     +AL    +MN+     D  T  I++ +Y +    + A+  F 
Sbjct: 239 NSTYGTLIDVYSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFK 298

Query: 218 -WSMR-------------------KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            WS+R                   +M +  S  +YNT++  YG+A    EA  +F  M R
Sbjct: 299 KWSLREALRHKVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLR 358

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K I    VT+NTMI I G   + E+   LMQ+M+     P+  TY+ +I I  K   ++ 
Sbjct: 359 KRILPTTVTFNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINM 418

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           AA  F++++   ++ D V Y+T++ A+    +V  A+ L+ E+ +      E   + L R
Sbjct: 419 AASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTR 478

Query: 378 ----AGRIEEA-TWVFR---------QAFDA--------GEVKDIS-VFGC--------- 405
               AG +E++  W +R         + + A        G VK+ + VF C         
Sbjct: 479 MYIEAGMLEKSWLWFWRFHLAGNMSSECYSANIDAYGERGHVKEAARVFACRLEQNKLTV 538

Query: 406 -----MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
                MI+ +   K Y    ++F+ M S G  PD    + ++         + A     +
Sbjct: 539 LEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYLKK 598

Query: 461 MQEEGCVFSDQVHF 474
           MQE G V SD V +
Sbjct: 599 MQEAGLV-SDCVQY 611



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 1/257 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA        Y  V+ + ++  + E+A  ++ EM    + PD   Y  LI  F   G  
Sbjct: 600 QEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCV 659

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             AIS++  M+   + G+ V+Y++LI+L  K+    +A   +  L+SS + P+  + N M
Sbjct: 660 KEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETYSSNCM 719

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+++ +  + K A  + E M+ +G   +  +Y+ +L +Y     F +A+ +  +M E+  
Sbjct: 720 IDLYSEQSMVKPAEEIFESMKRKG-DANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGL 778

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L + N ++ +Y      K+A   F  M   GI P   ++ +L  V  +  +  +A+ 
Sbjct: 779 LTYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTFKSLGIVLVKCGISKQAVG 838

Query: 251 LFRLMQRKEIEQNVVTY 267
                 +K+    + T+
Sbjct: 839 KLEATTKKDRHSGLQTW 855


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 204/449 (45%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL+ +  AK+W     L +EM +    P+  T++TLI+   + G+F+     
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ ++E   L+ EM ++    D V+++ L++ + +N      + +  +M    C  D+ T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVIT 404

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  SM   G  P+ +SY  +L+    AE + +A  L   M 
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    N +T+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK D
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   + + G+                                PNTI   +  + L+
Sbjct: 525 EALELLNVMVNKGM-------------------------------SPNTIIYSSIASALS 553

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R GRI +   +F    D     D  ++  +I    +  +    IE    M S+G  P+  
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
              +++         + A ++ +E+  +G
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 229/533 (42%), Gaps = 39/533 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+ + Y  V+R +    +   A  + DEM +RG AP    Y  ++    + G F SA+ 
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ +     + D+   + ++          KA+ +   L S G  PD+V+YN ++    
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            AK +   + L+EEM      P+ V+++TL++    N  F     V A+M E  C  D+ 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIR 298

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID   +    K A  +   M   G+ P+VV YNTLL+    AE + E   L   M
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K+   + VT+N ++  + ++   ++   L+++M   G  P+ ITY+T+I  + K G +
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418

Query: 316 DRAAMLFQKLRSSGVE-----------------------------------IDPVLYQTM 340
           D A ML + + + G +                                   ++P+ + T+
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 341 IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    + GLV  A  LL ++      P+ I   T I  L +AG+ +EA  +     + G 
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +  ++  +    SR  +   VI++F+ ++      D+ +   V++S  K  E E A +
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             + M   GCV ++  +  ++    +       + +   L S   + K  + H
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 651



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/427 (21%), Positives = 181/427 (42%), Gaps = 9/427 (2%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P+   Y  ++          +A  +++EM  +G  P    Y  +L        F  A+
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            V  +++   C LD+  CN++++          A  L   +   G +P VVSYN +L+  
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             A+ +G    L   M R     N+VT+NT+I    ++   E+   ++ +M   G  P+ 
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+TII    K G L  A  +  ++ S G++ + V Y T++            + LL E
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 360 LRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +   +    +    IL     + G ++    +  Q    G + D+  +  +I  F +   
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               + + + M + G  P++    +VL        +  A+DL S+M ++GC   + + F 
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL-NPITFN 476

Query: 476 MLSLYGARKDF--NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM-N 532
            L  +  +K      +E L + L +  + +      V+ G+  +A + ++A  ++N M N
Sbjct: 477 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTDEALELLNVMVN 535

Query: 533 KRRTFNS 539
           K  + N+
Sbjct: 536 KGMSPNT 542



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 1/131 (0%)

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           Y  M+  Y R G +  A+RL   +   PN       +  L   GRI +A  V  +    G
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
                 ++  ++E   R   + + + V E + + G   D     LVLN+       + A 
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 456 DLYSEMQEEGC 466
            L  ++   GC
Sbjct: 213 HLLRDLPSFGC 223


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 250/574 (43%), Gaps = 59/574 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P V +YN +L  V+R KQ  ++A G+F EM + G++P+ YTY+ LI  F   G  +  
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI------------- 120
           + +  +ME++    ++V Y+ +I+   KL    +A  +   +   G+             
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 121 ----------------------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
                                 VPD V +NT+IN +     F +A +L  EM + G+ P+
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+Y+TL+N   +      A+    +M +     +  T   +ID + Q    K A ++  
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M + G  P++++YN L+  +       +A  L + M  +    +VV+Y+T+I  + ++ 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           E EKA  L  EM  +GI P+  TYS++I    K  +L     LFQ++ S G+  D V Y 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I AY   G +  A RL  E+ Q    P+ +     I    +  R +EA  +  +    
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 395 GEVKDISVFGCMIELFSRNKKYANVI----------------EVFEKMRSAGYFPDSHII 438
             V +   +  +I+    N ++ + +                 V E M   GY  +  + 
Sbjct: 583 ESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVY 641

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG-CVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
            ++++ + K+   E A +LY EM   G    S  +     SLY   K+   L  L +   
Sbjct: 642 NVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE-LNQLLDYTL 700

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               I +  L  V+ GI  +   ++    ++  M
Sbjct: 701 KSCRITEAALAKVLIGINSKEGNMDAVFNVLKDM 734



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 214/470 (45%), Gaps = 10/470 (2%)

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           E +F    +   Q +      DLV+ S       +++  +KA+SI +  KS G +P +++
Sbjct: 115 EDLFQCLKNSYYQCKSSSAVFDLVVKS-----CARVNLINKALSIVNLAKSYGFMPGVLS 169

Query: 127 YNTMINVFGKAKL-FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           YN +++   + K   K A  + +EM E GV P+  +Y+ L+  +         L  F EM
Sbjct: 170 YNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM 229

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
               C  ++ T N +ID Y +L    +A +L   M   G++P+++SYN ++         
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            E   +   M ++    + VT+NT+I  Y       +A  L  EM   G+ PN +TY+T+
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           I    KAG L+RA     ++R  G+  +   Y T+I  + + G +  A +++ E+ +   
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P  I     I      GR+E+A+ + ++  + G + D+  +  +I  F RN++     +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +  +M + G  PD    + ++    K R      DL+ EM   G    +  +  +++ Y 
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
              D +    L + +           ++V+   + + +R  +A R++ ++
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 204/454 (44%), Gaps = 7/454 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + Y  ++R +    +   A  L D+M +RG  P+  TY+ L+    K   F+ A++
Sbjct: 139 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMA 198

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M     + ++V Y+ +I    +      A  + +RL S G  PD V+Y T++    
Sbjct: 199 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLC 258

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +K + +   L  EM E+   P+ V++  L+  +        A+ V  +M E  C  + T
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CNI+I+   +     DA +   +M   G +P  +SY T+L+    AE + +A  L + M
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM 378

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R     N VT+NT I I  +    E+A  L+++MQ  G     +TY+ ++  +   G +
Sbjct: 379 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAY---ERVGLVAH-AKRLLHELRQPNTIPRETA 371
           D A  LF   RS   + + + Y T++      ER+   A     +LH    PN +     
Sbjct: 439 DSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVL 495

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +    + G ++EA  +  Q  + G   ++  +  + +  +++    + +E+   + S G 
Sbjct: 496 VNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGV 555

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD    + ++    K    E A  ++   Q+ G
Sbjct: 556 SPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 176/419 (42%), Gaps = 44/419 (10%)

Query: 7   DWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           D +N    Y   P   +Y  +L+ +  +K+W+    LF EM ++   P+  T+  LI  F
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            + GM + AI  LQQM +   + +  L + +I    K      A    + + S G  PD 
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDT 352

Query: 125 VAY-----------------------------------NTMINVFGKAKLFKEARLLIEE 149
           ++Y                                   NT I +  +  L ++A +LIE+
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M+E G     V+Y+ L+N +        AL +F  M    C  +  T   ++      + 
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 469

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
              A  L   M      P+VV++N L+  + +     EAI L   M       N++TYNT
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +     K    E A  L+  + ++G+ P+ IT+S+II I  K  +++ A  +F   +  G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEA 384
           +    ++Y  +++   +   + +A   L  +     +P E+   I    LAR G ++EA
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 192/446 (43%), Gaps = 19/446 (4%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G APD Y  + LI    + G    A   L+  E      D+  Y+ L+        Y   
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVA---GYCRYGHL 126

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            +    + S  + PD   Y  +I V        +A  L+++M  +G +P+ V+Y+ LL  
Sbjct: 127 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDA-DRLFWSMRKMG 224
             +N  F +A++V  EM    C  ++ T N++I+     G++D A+D  +RLF      G
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLF----SYG 242

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P  VSY TLL+    ++ + +   LF  M  K    N VT++ +I+ + +    E+A 
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++Q+M       N    + +I    K G++D A      + S G   D + Y T++   
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            R      AK LL E+ + N  P E    T I IL + G IE+A  +  Q  + G    +
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  ++  F       + +E+F   RS    P++     +L         + A +L +E
Sbjct: 423 VTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAE 479

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDF 486
           M    C   + V F +L  +  +K F
Sbjct: 480 MLHRDCP-PNVVTFNVLVNFFCQKGF 504



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 156/371 (42%), Gaps = 24/371 (6%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A +  +R +S  + P+  A   +  +  +  L   ARL+       G  PD    + L+ 
Sbjct: 25  AAAAATRPESPNVAPN-PASARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIR 83

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDADRLFWSMRKMG 224
                 +  +A  V         P+D+   N ++     YG LD A+   RL  SM    
Sbjct: 84  NLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMP--- 137

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P   +Y  L+RV  +     +A+ L   M R+  + NVVTY  +++   K+   E+A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++ EM+ +G  PN +TY+ II    + G++D A  L  +L S G + D V Y T++   
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL--- 254

Query: 345 ERVGLVAHAK-----RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
              GL A  +      L  E+ + N +P E    +L     R G +E A  V +Q  +  
Sbjct: 255 --KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              + ++   +I    +  +  +  +    M S G  PD+     VL    +   +  A 
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372

Query: 456 DLYSEMQEEGC 466
           +L  EM    C
Sbjct: 373 ELLKEMVRNNC 383


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/506 (22%), Positives = 237/506 (46%), Gaps = 7/506 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+V +Y  ++     A+    A    +EM   G++P+  TYS +I+ +G+ G  ++
Sbjct: 221 AGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEA 280

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A  W Q+   +    + V+Y+N+I    K  +  +A +I + ++  G+   L  YN +++
Sbjct: 281 AERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMD 340

Query: 133 VFGKAKLFKEARLLIEEMR---EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            +   +   +   +   ++   E G+ P  VSY  L+NLY +  K  +AL +  EM +  
Sbjct: 341 GYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQG 400

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +  T +++ID Y QL    +A  +F  M   GI P  ++YN L+  + +      A+
Sbjct: 401 IKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRAL 460

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+  +    + TY  +I  + K  +   A   +++M+  G  P+A TY+ I+   
Sbjct: 461 ELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGL 520

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            +AG++DRAA +  ++  +GV  +   Y T+I  Y  +G +  A +  + +++    P+ 
Sbjct: 521 AQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDV 580

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           I   + +    +AGR++    +  +   AG   +  ++  +++ +++        ++ +K
Sbjct: 581 IAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQK 640

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           MR  G  PD H     +N+  K  +   A +   +M+++G   + Q +  ++  + +   
Sbjct: 641 MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASY 700

Query: 486 FNMLESLFERLDSDSNINKKELHHVV 511
                  ++ + S   I  K L+H +
Sbjct: 701 PEKALICYDEMKSAGMIPDKPLYHCI 726



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 222/514 (43%), Gaps = 58/514 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR---GIAPDRYTY 57
           R+ AI+  + EE     ++  YN+++   +  +  +    +F  ++ R   G++P   +Y
Sbjct: 315 RAEAIMTAM-EEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSY 373

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
             LI  + K G  D A+    +ME   +  +   YS +I+   +L D + A S+F  + +
Sbjct: 374 GCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSN 433

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           +GI PD + YN ++N F K                                   N +   
Sbjct: 434 AGIKPDGITYNILMNAFCK-----------------------------------NGQMNR 458

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           AL + A M   +CP  L T  I+ID +   G L MA +  R    M+  G  PS  +YN 
Sbjct: 459 ALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVR---DMKMAGFRPSAATYNV 515

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++    +A     A  +   M    +  N  +Y T+I+ Y    +   A      ++  G
Sbjct: 516 IMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           ++P+ I Y++++    KAG++     +  ++ ++GV ++  +Y  ++  + + G +  A 
Sbjct: 576 LKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEAS 635

Query: 355 RLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            ++ ++R     P      + I    +AG + +AT    Q    G   ++  +  +I  +
Sbjct: 636 DIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGW 695

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLRE--FETADDLYSEMQEE 464
           +        +  +++M+SAG  PD  +   ++ S        RE  F+    + SEM ++
Sbjct: 696 ASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQ 755

Query: 465 G-CV-FSDQVHFQMLSLYGARKDFNMLESLFERL 496
           G CV F+   H+Q   +   R+  ++  ++ ER+
Sbjct: 756 GICVDFATAKHWQRFLIKAERQSGDLTRAV-ERI 788



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 7/275 (2%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++++ YG+      A   F SMR  GI+P+V SY  L+  Y  A+    AI     M+ +
Sbjct: 197 LLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAE 256

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  N  TY+ +I  YG+  + E A    Q   +     N + Y+ II  + KAG ++RA
Sbjct: 257 GVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERA 316

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-------QPNTIPRETA 371
             +   +   G+E    LY  ++  Y     V     +   L+        P  +     
Sbjct: 317 EAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCL 376

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I + ++ G++++A  +  +  D G   +   +  +I+ + +    AN   VFE M +AG 
Sbjct: 377 INLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGI 436

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            PD     +++N++ K  +   A +L + M+   C
Sbjct: 437 KPDGITYNILMNAFCKNGQMNRALELLARMESGDC 471



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/447 (18%), Positives = 164/447 (36%), Gaps = 83/447 (18%)

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           + NL+E   K  D  K +  F R+K     P    +  ++N +GK      AR   E MR
Sbjct: 166 FRNLVEDHPK--DARKVVDAFKRIKK----PKQRDHTLLVNYYGKRGDKHSARAAFESMR 219

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
             G++P+  SY+ L++ Y        A++   EM                          
Sbjct: 220 AAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEM-------------------------- 253

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
                       G+ P+  +Y+ ++  YG       A   F+    +    N V YN +I
Sbjct: 254 ---------EAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNII 304

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIE----------------------------------- 296
             Y K+   E+A  +M  M+ +G+E                                   
Sbjct: 305 HAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTET 364

Query: 297 ---PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
              P  ++Y  +I ++ K GK+D+A  +  ++   G++ +   Y  +I  Y ++G  A+A
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424

Query: 354 KRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             +  ++     +P+ I     +    + G++  A  +  +         +  +  +I+ 
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           F +        E    M+ AG+ P +    ++++   +  + + A  +  EM   G   +
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERL 496
           ++ +  ++  Y    D  +    F R+
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRI 571



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 53/113 (46%)

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            FE MR+AG  P+ H    ++++Y   ++   A     EM+ EG   +   +  ++S YG
Sbjct: 214 AFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYG 273

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
              D    E  F+R  S++  +   +++ +   Y +A  +  A  IM  M ++
Sbjct: 274 RLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQ 326


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 252/533 (47%), Gaps = 10/533 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   +YN V+  + + K+   A  LF EM+     P+  T+S LI  F K G  +     
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL 221

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+  + GD+ +YS LI       D  +   +F+ +    + P++V Y+ ++N   K
Sbjct: 222 LEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK 281

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + +KEA  +++ M    V+PD V+Y+ L +   +N +  +A+ V   M +     +  T
Sbjct: 282 KQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVT 341

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +     DA  +  +M K G  P VV+Y+TL++         EA+ L  L+ 
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLM 401

Query: 257 RKE--IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            KE  I+ +V  +N +I+   K      A  +   M  RG   N +TY+ +I  +  AGK
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGK 461

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ET 370
           L +A  L++    SG+  +   Y  +I    ++ +++ AK L ++ R   T P      T
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNT 521

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L R   +E+A  +F++  +A    D+  F  +I+   +     +  E+  +M +  
Sbjct: 522 LMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMN 581

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNML 489
             PD+   ++++N + KL + + A  LY  M   G V  D V F  +L  Y  +     +
Sbjct: 582 LVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHV-PDAVLFDSLLKGYSLKGKTEKV 640

Query: 490 ESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
            S+ +++ D D  ++ K    ++A +   +  + D  +I+ + ++  +  +S+
Sbjct: 641 VSMLQQMADKDVVLDSKLTSTILACLCNMSKDV-DIEKILPKFSQHTSVGASI 692



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 208/455 (45%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS  + N ++ N+ +AK ++    +  +M    + P   + S LI  F        A   
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  + +     ++  ++ L++   +  D  KA+ +F  +K + ++PD V+YNT+IN   K
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   EA+ L +EM+    KP++V++S L++ + +N    E   +  EM ++    D+  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  +      +    LF  M +  + P+VV+Y+ L+    + + + EA  +   M 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             ++  +VV Y  +     K+     A  ++  M  RG EPN +TY+ II    K G++D
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR------QPNTIPRET 370
            A  + + +   G + D V Y T++     VG +  A  LL+ L       +P+      
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L +  R+  A  V+    + G   +I  +  +I+ +    K    +E+++    +G
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             P++    +++N   K++    A  L+++ +  G
Sbjct: 477 ISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 11/425 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y+ ++  + + ++W+ A  + D M    + PD   Y+ L     K G    AI 
Sbjct: 266 TPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIK 325

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVF 134
            L  M +     + V Y+ +I    K      A+ I   +   G  PD+V Y+T++  + 
Sbjct: 326 VLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLC 385

Query: 135 GKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           G  K+ +   LL   M +E  +KPD  +++ ++    +  +   A  V+  M E   P +
Sbjct: 386 GVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSN 445

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI+ID Y        A  L+      GI P+  +Y  L+    + ++   A  LF 
Sbjct: 446 IVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFN 505

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             +       V  YNT++    +    E+A NL QEM+N   +P+ ++++ II    KAG
Sbjct: 506 KKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAG 565

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            ++ A  L  ++ +  +  D + +  +I  + ++G +  A  L   +     +P      
Sbjct: 566 DVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFD 625

Query: 374 ILARA----GRIEEATWVFRQAFDAGEVKD----ISVFGCMIELFSRNKKYANVIEVFEK 425
            L +     G+ E+   + +Q  D   V D     ++  C+  + S++     ++  F +
Sbjct: 626 SLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNM-SKDVDIEKILPKFSQ 684

Query: 426 MRSAG 430
             S G
Sbjct: 685 HTSVG 689



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 151/341 (44%), Gaps = 4/341 (1%)

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P   + NT+I+   KAK +     +  +M    V P   S S L+  +V   K   A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V   + +    L++   N+++  + Q   +  A  LF  M++  + P  VSYNT++    
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + +   EA  LF+ M+  E + N VT++ +I  + K+ + E+   L++EM+  G+E +  
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            YS +I+ +   G ++R   LF ++    V  + V Y  ++ A  +      A ++L  +
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 361 RQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P   A T+LA    + GR  +A  V       GE  +   +  +I    +  + 
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            + + + E M   G  PD    + ++     + + + A DL
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 122/252 (48%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           +++E    P VFA+N+V++ + + ++   A  ++  M +RG   +  TY+ LI  +   G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A+   +      +S +   Y+ LI    K+   S A  +F++ ++SG  P +  YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T++    +    ++AR L +EMR     PD VS++ +++  ++      A  +  EM  +
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           N   D  T +I+I+ + +L    +A  L+  M   G  P  V +++LL+ Y       + 
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640

Query: 249 IHLFRLMQRKEI 260
           + + + M  K++
Sbjct: 641 VSMLQQMADKDV 652



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++  SP+   Y V++  + + +   +A GLF++ R  G  P    Y+TL+    +E   +
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +  Q+M       D+V ++ +I+   K  D   A  +   + +  +VPD + ++ +I
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F K     EA  L E M   G  PD V + +LL  Y    K  + +S+  +M + +  
Sbjct: 594 NRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653

Query: 192 LDLTTCNIMIDVYGQLDMAKDAD 214
           LD    + ++      +M+KD D
Sbjct: 654 LDSKLTSTILACL--CNMSKDVD 674


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 184/373 (49%), Gaps = 6/373 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P + A+N +L+   R    + A  +  EM + G++PD +TY  L+  +   G +
Sbjct: 343 KEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRW 402

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +SA   L+QME   V  +  ++S ++   R   ++ K   +   +K+S + PD   YN M
Sbjct: 403 ESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVM 462

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--- 187
           I+ FGK      A    + M  +G++PD V+++TL++ + ++     A  +F EM E   
Sbjct: 463 IDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGY 522

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           + CP   TT NIMI+  G+ +   +   L   M+  G+ P+VV+Y TL+ +YG +  F +
Sbjct: 523 LPCP---TTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFND 579

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI     M+   ++ +   YN +I  + +    E+A N  + M + G+ P+ +  +++I 
Sbjct: 580 AIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLIN 639

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +G+  +   A  + Q ++ + V+ D V Y T++ A  RV        +  E+      P
Sbjct: 640 AFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTP 699

Query: 368 RETAITILARAGR 380
              A  +L  A R
Sbjct: 700 DGKARAMLRSALR 712



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           ++  G+ P   T+  +I+  G  G  + A +  ++M++  +   +  ++ L++   +   
Sbjct: 307 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +A SI S ++ SG+ PD   Y  +++ +     ++ AR L+++M  + V+P+T  +S 
Sbjct: 367 LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSR 426

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +L  Y +  ++ +   V  EM   N   D    N+MID +G+ +    A   +  M   G
Sbjct: 427 ILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I+P VV++NTL+  + +      A  LF  MQ +       TYN MI   G+  + ++  
Sbjct: 487 IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+ +MQ++G+ PN +TY+T++ I+G +G+ + A    + ++S+G++    +Y  +I A+
Sbjct: 547 ILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAF 606

Query: 345 ERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + GL   A    + ++ +  +P+ +   + I       R  EA  + +   +     D+
Sbjct: 607 AQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDV 666

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
             +  +++   R  K+  V  V+E+M  +G  PD    A++
Sbjct: 667 VTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAML 707



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 204/493 (41%), Gaps = 45/493 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +   YN ++    R    E A  L   MRQ G   D   YS +I    +    D  I  L
Sbjct: 208 TPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKID--IPLL 265

Query: 78  QQM----EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           Q++    E D++  D +L +++I    K  D ++A+   S +++SG+ P    +  +I+ 
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            G     +EA  + EEM+E G+KP   +++ LL  Y       EA S+ +EM +     D
Sbjct: 326 LGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPD 385

Query: 194 LTTCNIMIDVYGQLD---------------------------MAKDADRLFWS------- 219
             T  +++D Y  +                            +A   DR  W        
Sbjct: 386 EHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLR 445

Query: 220 -MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M+   + P    YN ++  +G+      A+  +  M  + IE +VVT+NT+I  + K  
Sbjct: 446 EMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHG 505

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            H++A  L +EMQ RG  P   TY+ +I   G+  K D   +L  K++S G+  + V Y 
Sbjct: 506 YHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYT 565

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDA 394
           T++  Y   G    A   L  ++     P  T     I   A+ G  E+A   +R     
Sbjct: 566 TLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISD 625

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    +     +I  F  +++      + + M+     PD      ++ +  ++ +F+  
Sbjct: 626 GLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKV 685

Query: 455 DDLYSEMQEEGCV 467
             +Y EM   GC 
Sbjct: 686 PAVYEEMILSGCT 698



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 189/438 (43%), Gaps = 48/438 (10%)

Query: 57  YSTLITCFGK-EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           YS LI   G+ E ++++ I     + Q +    L  Y+ LI    + +D  KA+++ SR+
Sbjct: 182 YSILIHALGRSEKLYEAFI-----LSQKQTLTPLT-YNALIGACARNNDLEKALNLMSRM 235

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVENH 173
           +  G   D + Y+ +I    +        L  L EE+    ++ D +  + ++  + +  
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAG 295

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
               AL   + +         +T   +I   G     ++A+ +F  M++ G+ P + ++N
Sbjct: 296 DPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFN 355

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            LL+ Y       EA  +   M++  +  +  TY  ++  Y      E A +L+++M+ R
Sbjct: 356 ALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR 415

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            ++PN   +S I+A +   G+  +   + +++++S V+ D   Y  MI  + +   + HA
Sbjct: 416 NVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHA 475

Query: 354 ----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
                R+L E  +P+ +                  TW                   +I+ 
Sbjct: 476 METYDRMLSEGIEPDVV------------------TW-----------------NTLIDC 500

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             ++  +    E+FE+M+  GY P      +++NS G+  +++    L  +MQ +G + +
Sbjct: 501 HRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN 560

Query: 470 DQVHFQMLSLYGARKDFN 487
              +  ++ +YG    FN
Sbjct: 561 VVTYTTLVDIYGHSGRFN 578



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 17/309 (5%)

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+   G +E   EA   F L Q++ +    +TYN +I    ++ + EKA NLM  M+
Sbjct: 182 YSILIHALGRSEKLYEA---FILSQKQTL--TPLTYNALIGACARNNDLEKALNLMSRMR 236

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
             G + + I YS II    +  K+D   +  L++++ S  +E+D +L   +I+ + + G 
Sbjct: 237 QDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGD 296

Query: 350 VAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A   L  ++     P+ +     I+ L   GR EEA  +F +  + G    I  F  
Sbjct: 297 PNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNA 356

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++ ++R         +  +M  +G  PD H   L++++Y  +  +E+A  L  +M+   
Sbjct: 357 LLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 416

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH---VVAGIYERANRLN 522
              +  +  ++L+ Y  R ++   +  FE L    N N K   H   V+   + + N L+
Sbjct: 417 VQPNTFIFSRILASYRDRGEW---QKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLD 473

Query: 523 DASRIMNRM 531
            A    +RM
Sbjct: 474 HAMETYDRM 482



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/469 (20%), Positives = 197/469 (42%), Gaps = 46/469 (9%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G+  + +SWLQ+   +      +LYS LI     L    K    F   +   + P  + Y
Sbjct: 160 GLGYAVVSWLQR--HNLCFSYELLYSILI---HALGRSEKLYEAFILSQKQTLTP--LTY 212

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL--SVFAEM 185
           N +I    +    ++A  L+  MR+ G + D ++YS ++      +K    L   ++ E+
Sbjct: 213 NALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEI 272

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADR--LFWSM-RKMGIDPSVVSYNTLLRVYGEA 242
                 LD    N +I  + +   A D +R   F SM +  G++P   ++  ++   G  
Sbjct: 273 ESDKIELDGLLLNDIILGFAK---AGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNH 329

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  +F  M+   ++  +  +N ++K Y +    ++A +++ EM+  G+ P+  TY
Sbjct: 330 GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTY 389

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             ++  +   G+ + A  L +++ +  V+ +  ++  ++ +Y   G       +L E++ 
Sbjct: 390 GLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKN 449

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N  P                               D   +  MI+ F +     + +E 
Sbjct: 450 SNVKP-------------------------------DRHFYNVMIDTFGKFNCLDHAMET 478

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           +++M S G  PD      +++ + K    + A +L+ EMQE G +     +  M++  G 
Sbjct: 479 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 538

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++ ++ ++ L  ++ S   +     +  +  IY  + R NDA   +  M
Sbjct: 539 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAM 587



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 47/243 (19%), Positives = 97/243 (39%), Gaps = 15/243 (6%)

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS +I   G++ KL  A +L QK       + P+ Y  +I A  R   +  A  L+  
Sbjct: 180 LLYSILIHALGRSEKLYEAFILSQK-----QTLTPLTYNALIGACARNNDLEKALNLMSR 234

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE----LFS 411
           +RQ     + I     I  L R  +I+    + ++ ++  E   I + G ++      F+
Sbjct: 235 MRQDGFQSDFINYSLIIQSLTRTNKID--IPLLQKLYEEIESDKIELDGLLLNDIILGFA 292

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +       +     ++++G  P +     V+++ G     E A+ ++ EM+E G     +
Sbjct: 293 KAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIK 352

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +L  Y  +      ES+   ++       +  + ++   Y    R   A  ++ +M
Sbjct: 353 AFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM 412

Query: 532 NKR 534
             R
Sbjct: 413 EAR 415


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 224/468 (47%), Gaps = 12/468 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y++++R     K+ + A   FD M+ +G+ P  +  + +++ F K    + A     +M 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + R+   +V ++ +I +  K     KA      +++ GI P++V YNT+I+ +      +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            AR++ + M+ +GVKPD+ +Y + ++   +  K  EA  +  +M E+       T N +I
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 202 DVY---GQLDMAKD-ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           D Y   G L+MA D  D+    M + G+ P+V +YN L+          EA  + + M  
Sbjct: 304 DGYCNKGNLEMAFDYRDK----MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K +  + VTYN +I  Y +    +KA  L  EM ++GI+P  +TY+++I +  K G++ +
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL-- 375
           A  LF+K+   G+  D +++  +I  +   G +  A  +L E+ Q   +P E     L  
Sbjct: 420 ADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQ 479

Query: 376 --ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              R G++E A  +  +    G   D   +  +I  +S+     +   V ++M S G+ P
Sbjct: 480 GRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP 539

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
                  ++    K  E + A+ L  EM  +G   +D  +  ++   G
Sbjct: 540 TLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 182/367 (49%), Gaps = 1/367 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++       + E A  +FD M+ RG+ PD YTY + I+   KEG  + A   
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M++  +    V Y+ LI+      +   A     ++   G++P +  YN +I+    
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  +I+EM E+G+ PD+V+Y+ L+N Y       +A ++  EM          T
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I V  +    K AD LF  + + GI P ++ +N L+  +        A  + + M 
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           + ++  + VT+NT+++   +  + E A  L++EM++RGI+P+ I+Y+T+I+ + K G + 
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-TAITIL 375
            A  +  ++ S G     + Y  +I    +     HA++LL E+      P + T ++++
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583

Query: 376 ARAGRIE 382
              G +E
Sbjct: 584 EGIGNVE 590



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 174/402 (43%), Gaps = 6/402 (1%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           VLY  LI    +L     A   F  +K  G++P + A N M+++F K+   ++A +L  E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M    +K   V+++ ++N+  +  K  +A      M  +    ++ T N +I  Y     
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  +F  M+  G+ P   +Y + +    +     EA  +   M+   +    VTYNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  Y      E A +   +M   G+ P   TY+ +I       K+D A  + +++   G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEAT 385
           +  D V Y  +I  Y R G V  A  L  E+     QP  +   + I +L++ GR+++A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F +    G   D+ +F  +I+    N        + ++M      PD      ++   
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDF 486
            +  + E A +L  EM+  G +  D + +  ++S Y  R D 
Sbjct: 482 CREGKVEAARELIEEMKSRG-IKPDHISYNTLISGYSKRGDM 522



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 141/300 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P+   YN ++         E+A    D+M + G+ P   TY+ LI     +   
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM 347

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   +++M +  +  D V Y+ LI    +  +  KA ++   + S GI P  V Y ++
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I V  K    K+A  L E++  +G+ PD + ++ L++ +  N     A ++  EM+++  
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N ++    +    + A  L   M+  GI P  +SYNTL+  Y +     +A  
Sbjct: 468 VPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFR 527

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M        ++TYN +I+   K+ E + A  L++EM ++GI PN  TY ++I   G
Sbjct: 528 VRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 140/303 (46%), Gaps = 4/303 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +++I    +L    DA   F  M+  G+ P V + N +L ++ ++    +A  L+  M R
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I+ +VVT+N MI +  K  + +KA   +  M+  GI+PN +TY+TII  +   G+++ 
Sbjct: 185 MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A M+F  ++  GV+ D   Y + I    + G +  A  +L ++++    P  +   T I 
Sbjct: 245 ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLID 304

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                G +E A     +    G +  +S +  +I     + K      + ++M   G  P
Sbjct: 305 GYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVP 364

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           DS    +++N Y +    + A  L+ EM  +G   +   +  ++ +   R      + LF
Sbjct: 365 DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLF 424

Query: 494 ERL 496
           E++
Sbjct: 425 EKI 427



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ A+L  + ++ +  P    +N +++   R  + E A  L +EM+ RGI PD  +Y+TL
Sbjct: 454 RAFAMLKEM-DQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I+ + K G    A     +M     +  L+ Y+ LI+   K  +   A  +   + S GI
Sbjct: 513 ISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572

Query: 121 VPDLVAYNTMINVFG 135
            P+   Y ++I   G
Sbjct: 573 TPNDNTYLSLIEGIG 587


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 243/515 (47%), Gaps = 22/515 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  SP  F     +    R+K  + A  +F+EM  R    +  +Y+ LI    + G  D
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            A+S   +M+ D    ++  Y+ LI+ L RK  +  KA+ +   +    +VPDL+ YN++
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRK--NVHKAMGLLDEMLERNLVPDLITYNSL 333

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    +A     A  L+  M+E+G+ PD  +Y   ++   ++++  EA  +F  + E   
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++   +++ID Y ++    +A  LF  M      P+  ++N L+     A    EA+ 
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M +  ++  V T+N +I    K  + + A   +Q+M + G +P A TY+  I ++ 
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYC 513

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            AGK+  A  +  +++  GV  D   Y ++I AY ++GL   A  +L  +   +  P   
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHH 573

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN----KKYANVIEVFEKM 426
             T L+   ++ +  +V  ++ + G V+ +S FG   ++   N     ++  VIE+FE+M
Sbjct: 574 --TFLSLIKQLFDKRYVVEKSGETG-VESVSNFG---DVPGSNMWKMMEFDIVIELFEEM 627

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              G  PDS     +++   K+     A  L  +MQ+EG   S+ V   ++S     + +
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 487 NMLESLFERLDSDSNINKKELHH---VVAGIYERA 518
               ++ E  D   + +  +L H   ++ G+YE  
Sbjct: 688 GEAANIVE--DMICSGHSPQLEHCKTLICGLYEEG 720



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 215/506 (42%), Gaps = 37/506 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V++   + ++  Y P+V+ Y  +++ + R K    A GL DEM +R + PD  TY++LI
Sbjct: 277 AVSLFVRMKDDCCY-PNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G  DSA   L  M++  +  D   Y   I+   K +   +A  +F  L   G+ 
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            +++ Y+ +I+ + K     EA  L E+M  +   P+  +++ L++         EALS+
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M ++     + T NI+I    +     DA +    M   G  P   +YN  + VY  
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA  +   M+ + +  +  TY ++IK YGK      A ++++ M +   EP+  T
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 302 YSTIIA------------------------------IWGKAGKLDRAAMLFQKLRSSGVE 331
           + ++I                               +W K  + D    LF+++   G  
Sbjct: 575 FLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW-KMMEFDIVIELFEEMEKHGCT 633

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWV 387
            D   Y+ +I    +V  +  A +LL ++++    P E      I+   +  +  EA  +
Sbjct: 634 PDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANI 693

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
                 +G    +     +I       +      VF+K+R  GY  D     ++++   K
Sbjct: 694 VEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLK 753

Query: 448 LREFETADDLYSEMQEEGCVFSDQVH 473
               E    L+ EM++ GC FS + +
Sbjct: 754 QGLVEEFSQLFEEMEKNGCNFSPRTY 779



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 218/500 (43%), Gaps = 37/500 (7%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF-GK 66
           WI++   +  +V +Y  +L              L D  +     P +   S +  C+   
Sbjct: 90  WISQTPNFKHNVDSYASLLT-------------LIDHHKIVSDVP-KIIVSMIKCCYSAP 135

Query: 67  EGMFDSAISWLQQMEQDRVSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + +F S I   ++M +D ++   L  Y+ L+ L  +     +   +++ +    +  D+ 
Sbjct: 136 DALFVSDIC--RKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIY 193

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +N MINV+ K    KEA+  + +M + G+ PD  + ++ +  Y  +     A  VF EM
Sbjct: 194 TFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM 253

Query: 186 ---NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
              NEV       + N +I    +     +A  LF  M+     P+V +Y  L++     
Sbjct: 254 PNRNEV-------SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK 306

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +  +A+ L   M  + +  +++TYN++I    ++   + A  L+  M+ RG+ P+  TY
Sbjct: 307 NVH-KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTY 365

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
              I    K+ +++ A  LF  L   GV  + ++Y  +I  Y +VG V  A  L  ++  
Sbjct: 366 GCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLS 425

Query: 363 PNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
            N  P        I  L  AG ++EA  +F Q    G    +  F  +I    +   + +
Sbjct: 426 KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDD 485

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             +  +KM S+G  P +      +  Y    + + A+D+  +M+EEG    D  +  ++ 
Sbjct: 486 AHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIK 545

Query: 479 LYG----ARKDFNMLESLFE 494
            YG        F++L+S+F+
Sbjct: 546 AYGKLGLTYSAFDVLKSMFD 565



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 176/407 (43%), Gaps = 32/407 (7%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           + D + EE   S +V  Y+V++    +  + + A  LF++M  +  +P+ YT++ LI   
Sbjct: 384 LFDSLTEEG-VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGL 442

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G    A+S   QM +  +   +  ++ LI    K  D+  A     ++ SSG  P  
Sbjct: 443 CSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVA 502

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             YN  I V+  A   +EA  ++ +M+E+GV PD  +Y++L+  Y +      A  V   
Sbjct: 503 RTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562

Query: 185 MNEVNC-PLDLTTCNIMIDVY------------GQLDMAKDAD----------------R 215
           M + +C P   T  +++  ++            G   ++   D                 
Sbjct: 563 MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIE 622

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  M K G  P    Y  L+    + E  G A+ L   MQ++ I  + + +N +I    
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCC 682

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++ +A N++++M   G  P      T+I    + G+ +R   +F+KLR  G   D +
Sbjct: 683 KLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ--PNTIPRETAITILARAGR 380
            ++ +I    + GLV    +L  E+ +   N  PR  +I      G+
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGK 789



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 184/428 (42%), Gaps = 12/428 (2%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
            Y+ L+T   + G+ D       +M ++ VS D+  ++ +I +  K+    +A     ++
Sbjct: 159 CYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKM 218

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
             +G+ PD     + I  + ++K    A  + EEM  +    + VSY+ L++   E  + 
Sbjct: 219 IQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRI 274

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EA+S+F  M +  C  ++ T   +I    + ++ K A  L   M +  + P +++YN+L
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEMLERNLVPDLITYNSL 333

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +     A     A  L  LM+ + +  +  TY   I    KS   E+A  L   +   G+
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
             N I YS +I  + K GK+D A  LF+K+ S     +   +  +I      G +  A  
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 356 LLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           L  ++ +    P      IL     + G  ++A    ++   +GE      +   IE++ 
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYC 513

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
              K     ++  +M+  G  PD      ++ +YGKL    +A D+   M +  C   + 
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADC---EP 570

Query: 472 VHFQMLSL 479
            H   LSL
Sbjct: 571 SHHTFLSL 578


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%), Gaps = 4/375 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R    VF +N+++    R ++ + A  +  ++ + G  PD  T+S+LI     E  F
Sbjct: 111 ELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKF 170

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +  +M       +L  Y+ +I+   K+   + A+ +  ++  +G  PD+V YNT+
Sbjct: 171 ARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K +L  EA  +  E++ +GV+PD  +YS L++    + +  EA ++F EM  +N 
Sbjct: 231 IDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNI 290

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T NI++D   +  M  +A  +   M + G++P+  +YN+L+  Y       EA  
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM 350

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M  K    NVV+YN +I  Y K+   ++A  L  EM  RG+ PN   Y+T+I+   
Sbjct: 351 VFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC 410

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           +AG+   A  LF+ +++ G   D V    ++ +  ++G + +A RL   ++    +PN +
Sbjct: 411 QAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLV 470

Query: 367 PRETAITILARAGRI 381
             +  I  + ++G+I
Sbjct: 471 TYDILIRAMYKSGKI 485



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 4/382 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  ++ +L  ++R K +     L   +    I  D + ++ LI CF +    D A S 
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D V +S+LI        +++A+  F  + +SG  P+L  YNT+I  F K
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+++M + G +PD V Y+T+++   ++    EAL +F+E+       D+ T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I++      D  ++A  LF  M  + I P VV++N L+    +  +  EA  + ++M 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +E N  TYN+++  Y    +  +A  +   M  +G  PN ++Y+ +I  + KA ++D
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
            A  LF ++   G+  +   Y T+I    + G    A+ L  +++     P     TI  
Sbjct: 382 EARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441

Query: 375 --LARAGRIEEATWVFRQAFDA 394
             L + G ++ A  +FR   D+
Sbjct: 442 DSLCKLGYLDNALRLFRAMQDS 463



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 156/303 (51%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P++  YN +++   +  +  +A GL  +M + G  PD   Y+T+I    K+ +   A+
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +++   V  D+  YS L+          +A ++F+ + S  I+PD+V +N +++  
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K  +  EA+ +I+ M E+GV+P+  +Y++L+N Y   +K  EA  VF  M    C  ++
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + NI+I+ Y +     +A  LF  M   G+ P+  +YNTL+    +A    EA  LF+ 
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           MQ +    ++VT   ++    K    + A  L + MQ+  ++PN +TY  +I    K+GK
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484

Query: 315 LDR 317
           + R
Sbjct: 485 IYR 487



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 185/393 (47%), Gaps = 5/393 (1%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V +  L+    ++  Y   +S+  R++   I  D+  +N +IN F + +    A  ++ 
Sbjct: 84  IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           ++ + G +PD V++S+L+N      KF  A+  F EM       +L T N +I  + ++ 
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
               A  L   M K G  P +V YNT++    +  L  EA+ +F  ++ K +  +V TY+
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            ++     S + E+A+ L  EM +  I P+ +T++ ++    K G L  A  + + +   
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEA 384
           GVE +   Y +++  Y     V  A+ +   +     +P   +  IL     +A RI+EA
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +F +    G + +   +  +I    +  ++    E+F+ M++ G  PD     ++L+S
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             KL   + A  L+  MQ+  C+  + V + +L
Sbjct: 444 LCKLGYLDNALRLFRAMQDS-CLKPNLVTYDIL 475


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 229/500 (45%), Gaps = 41/500 (8%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W   EA  Y P V  + +++  + +  + + A G  D M+++G+AP+ +TY+TLI    +
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
               D A+     ME   +      Y   I+   K  +  KAI  F ++K++GIVP++VA
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            N  +    +    +EA+     +++ G+ PD ++Y+ L+  Y +  +  +A+ + +EM 
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E  C  ++   N +ID   + D   +A ++F  M++M + P+VV+YNTLL   G+     
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ 594

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  LF+ M   +   N +++NT++    K+ E + A  ++  M      P+ +TY+T+I
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654

Query: 307 AIWGKAGKLDRAAMLFQKLRS-------------SGVEIDPVLYQTMIVAYERVGLVA-H 352
               K  +++ A  LF +++               GV  D  +     VA E V  V  H
Sbjct: 655 YGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDH 714

Query: 353 AKR--------------------LLHELRQPNTIPRETAITI-----LARAGRIEEATWV 387
           A                      L  E    NTI  + ++ I     L + G+  +A  V
Sbjct: 715 ADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNV 774

Query: 388 FRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           F +   +  +   +  +  +I+   + +       +F KM++AG  PD     L L++ G
Sbjct: 775 FLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALG 834

Query: 447 KLREFETADDLYSEMQEEGC 466
           K  + +   DLY EM   GC
Sbjct: 835 KSGKIKELFDLYEEMLFRGC 854



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 205/433 (47%), Gaps = 11/433 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+++ + + +R + RA + + A+G+   M   G  PD  TY+ LI      G  ++A   
Sbjct: 260 PNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKEL 319

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI---FSRLKSSGIVPDLVAYNTMINV 133
             +M+      D V Y  L++   K SD+    +I   +S +++ G +PD+V +  +I+ 
Sbjct: 320 FLKMKASSHKPDRVTYITLLD---KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K     EA   ++ M++QGV P+  +Y+TL+   +  ++  EAL +F  M  +     
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T  + ID YG+   +  A + F  M+  GI P++V+ N  L    E     EA   F 
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFN 496

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +++  +  + +TYN +++ YGK+   + A  L+ EM+  G +P  +  +++I    KA 
Sbjct: 497 GLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKAD 556

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
           ++D A  +FQ+++   +    V Y T++    + G V  A    K ++ +   PNTI   
Sbjct: 557 RVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFN 616

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T +  L + G ++ A  +  +  +     D+  +  +I    +  +      +F +M+  
Sbjct: 617 TLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV 676

Query: 430 GYFPDSHIIALVL 442
            Y PD   +  +L
Sbjct: 677 IY-PDYVTLCTLL 688



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 234/515 (45%), Gaps = 11/515 (2%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           ++Y  ++  +L++     A  ++  M   GI P   TYS L+   GK    ++ +  LQ+
Sbjct: 193 YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQE 252

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME   +  ++  ++  I +  +     +A  I  R+  +G  PD+V Y  +I+    A  
Sbjct: 253 MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNEVNCPLDLTTCN 198
              A+ L  +M+    KPD V+Y TLL+ +  +H  ++A+  F +EM       D+ T  
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKF-SDHGDLDAIKEFWSEMEADGYLPDVVTFT 371

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           I+ID   ++    +A      M+K G+ P++ +YNTL+          EA+ LF  M+  
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESL 431

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +E    TY   I  YGKS E  KA    ++M+  GI PN +  +  +    + G+L+ A
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
              F  L+  G+  D + Y  ++  Y + G V  A +LL E+ +    P  +   + I  
Sbjct: 492 KEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDT 551

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L +A R++EA  +F++  +      +  +  ++    +  +      +F+ M +    P+
Sbjct: 552 LYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPN 611

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESL 492
           +     +L+   K  E + A  +   M E  C F D + +  + +YG  K+   N    L
Sbjct: 612 TISFNTLLDCLCKNGEVDLALKMLFRMTEMNC-FPDVLTYNTV-IYGLIKENRVNYAFWL 669

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           F ++      +   L  ++ G+  +  R+ DA R+
Sbjct: 670 FHQMKKVIYPDYVTLCTLLPGVI-KDGRIEDAFRV 703



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 179/384 (46%), Gaps = 4/384 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P V  Y V++  +  A +   A  LF +M+     PDR TY TL+  F   G  
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+   +  +ME D    D+V ++ LI+   K+    +A      +K  G+ P+L  YNT+
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    +     EA  L   M   G++    +Y   ++ Y ++ +  +A+  F +M     
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++  CN  +    +    ++A   F  ++K G+ P  ++YN L+R YG+A    +AI 
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M+    +  VV  N++I    K+   ++A  + Q M+   + P  +TY+T++A  G
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-- 368
           K G++  A  LF+ + +     + + + T++    + G V  A ++L  + + N  P   
Sbjct: 589 KEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVL 648

Query: 369 --ETAITILARAGRIEEATWVFRQ 390
              T I  L +  R+  A W+F Q
Sbjct: 649 TYNTVIYGLIKENRVNYAFWLFHQ 672



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 156/315 (49%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +PS+ AYN ++  +L+A+  E+A GLF +M+  G  PD +TY+  +   GK G       
Sbjct: 785  TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              ++M       + + ++ +I    K +   KAI ++  L S    P    Y  +I+   
Sbjct: 845  LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K    +EA+   EEM + G  P+   Y+ L+N + +      A  +F  M +     DL 
Sbjct: 905  KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            + +IM+D    +    DA   F  ++  G+DP +V YN ++   G ++   EA+ LF  M
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            + + I  ++ TYN +I   G +   E+A  + +E+Q +G+EPN  TY+ +I     +G  
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 316  DRAAMLFQKLRSSGV 330
            DRA  +++K+   G 
Sbjct: 1085 DRAYAVYKKMMVGGC 1099



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 39/320 (12%)

Query: 85   VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
            ++  L  Y++LI+   K      A  +F ++K++G  PD+  YN  ++  GK+   KE  
Sbjct: 784  ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843

Query: 145  LLIEEMREQGVKPDTVS-----------------------------------YSTLLNLY 169
             L EEM  +G KP+T++                                   Y  L++  
Sbjct: 844  DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903

Query: 170  VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            ++  +  EA   F EM +  C  +    NI+++ +G+    + A  LF  M K GI P +
Sbjct: 904  LKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDL 963

Query: 230  VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
             SY+ ++          +A+H F  ++   ++ ++V YN MI   G+S   E+A +L  E
Sbjct: 964  KSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDE 1023

Query: 290  MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            M+NRGI P+  TY+ +I   G AG ++ A  ++++L+  G+E +   Y  +I  +   G 
Sbjct: 1024 MRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083

Query: 350  VAHA----KRLLHELRQPNT 365
               A    K+++    +PNT
Sbjct: 1084 PDRAYAVYKKMMVGGCRPNT 1103



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 200/495 (40%), Gaps = 85/495 (17%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V  YN V+  +++  +   A  LF +M++  I PD  T  TL+    K+G  + A   
Sbjct: 645  PDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRV 703

Query: 77   LQQME------------QDRVSGDLV-------------LYSN--------LIELARKLS 103
             ++              +D + G L+             L  N        LI L + L 
Sbjct: 704  AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763

Query: 104  DYSKAI---SIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
             + KA+   ++F +L KS  I P L AYN++I+   KA+L         EM         
Sbjct: 764  KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARL--------TEM--------- 806

Query: 160  VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
                              A  +F +M    C  D+ T N+ +D  G+    K+   L+  
Sbjct: 807  ------------------AWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848

Query: 220  MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
            M   G  P+ +++N ++    ++    +AI L+  +   +      TY  +I    K   
Sbjct: 849  MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908

Query: 280  HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             E+A    +EM + G  PN   Y+ ++  +GK G ++ A  LF+++   G+  D   Y  
Sbjct: 909  LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968

Query: 340  MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            M+     VG V  A     EL+     P+ +     I  L R+ R+EEA  +F +  + G
Sbjct: 969  MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028

Query: 396  EVKDISVFGCMIELFSRNKKYANVIE----VFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
               D+  +  +I     N   A ++E    ++E+++  G  P+      ++  +      
Sbjct: 1029 ITPDLYTYNALI----LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 452  ETADDLYSEMQEEGC 466
            + A  +Y +M   GC
Sbjct: 1085 DRAYAVYKKMMVGGC 1099



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 206/460 (44%), Gaps = 16/460 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++E+ R        + +F+ ++   I   +  Y T+  V       +EA + +E+MR+ G
Sbjct: 128 VLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              +  SY  L++L +++    EAL V+  M        L T + ++   G+    +   
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   M  +G+ P++ ++   +R+ G A    EA  + + M       +VVTY  +I   
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             + +   A  L  +M+    +P+ +TY T++  +   G LD     + ++ + G   D 
Sbjct: 308 CNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDV 367

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           V +  +I A  +VG V  A   L  +++    PN     T I  L R  R++EA  +F  
Sbjct: 368 VTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNS 427

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G       +   I+ + ++ +    I+ FEKM++ G  P+       L S  +   
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR 487

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQML-SLYG--ARKDFNMLESLFERLDSDSNINKKEL 507
            E A + ++ +++ G +  D + + +L   YG   R D + ++ L E  ++  +     +
Sbjct: 488 LEEAKEFFNGLKKCG-LAPDAITYNILMRCYGKAGRVD-DAIKLLSEMEENGCDPEVVII 545

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRR------TFNSSL 541
           + ++  +Y +A+R+++A ++  RM + +      T+N+ L
Sbjct: 546 NSLIDTLY-KADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 61/116 (52%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P +  YN+++  + R+++ E A  LFDEMR RGI PD YTY+ LI   G  GM + A   
Sbjct: 996  PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKM 1055

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             ++++   +  ++  Y+ LI       +  +A +++ ++   G  P+   +  + N
Sbjct: 1056 YEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 201/430 (46%), Gaps = 4/430 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   ++  +++ +    Q   A  LFD+M   G  PD   Y+TLI    K G   +AI  
Sbjct: 142 PDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRL 201

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ ME+     D+V+Y  LI    K    ++A ++FS + + GI P++V  N+++     
Sbjct: 202 LRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCN 261

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K    L+ EM +  + P+ +S +T+++   +     +A  V   M +     D+ T
Sbjct: 262 LGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVT 321

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID +       +A ++F  M   G  P+V SYNTL+  Y + E   +A++LF  M 
Sbjct: 322 YTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMC 381

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R+++  N VTYNT+I         + A  L +EM   G  P+ +TY  ++    K   LD
Sbjct: 382 RQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLD 441

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  L + +  S ++ D  +Y  +I    R G +  A+ L   L     +PN        
Sbjct: 442 KAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMT 501

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G ++EAT +F +  +     D   +  + + F RN + +  I++ E+M + G+ 
Sbjct: 502 HGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS 561

Query: 433 PDSHIIALVL 442
            D     L++
Sbjct: 562 CDVSTTTLLV 571



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 200/449 (44%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  +  +L ++ + K++     L  +M   GI  + YT + LI  F      + A S 
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI+         +A+ +F ++   G  PD+V Y T+IN   K
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +PD V Y TL++   ++ +  +A ++F+EM       ++ T
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           CN ++     L   K  + L   M    I P+ +S  T++    +  +  +A  +  +M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +E +VVTY  +I  +    E ++A  +   M ++G  PN  +Y+T+I  + K  ++D
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A  LF+++    +  + V Y T+I          H                      L 
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLI----------HG---------------------LC 400

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             GR+++A  +FR+    G++ D+  +  +++   +N      + + + +  +   PD  
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQ 460

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
           I  +V++   +  E E A DL+S +  +G
Sbjct: 461 IYTIVIDGMCRAGELEDARDLFSNLSSKG 489



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 162/350 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF EM  +GI+P+  T ++L+      G +
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L +M   ++  + +  + +++   K    ++A  +   +  SG+ PD+V Y  +
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+         EA  + + M  +G  P+  SY+TL+N Y +  +  +A+ +F EM     
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +I     +   +DA  LF  M   G  P +V+Y  LL    +     +A+ 
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   ++ ++  Y  +I    ++ E E A +L   + ++G++PN  TY+ +     
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G LD A  LF ++  +    D   Y T+   + R    + A +LL E+
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +++  P+  +   V+  + +      AH + D M Q G+ PD  TY+ LI         D
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     M     + ++  Y+ LI    K+    KA+ +F  +    ++P+ V YNT+I
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        ++A  L  EM   G  PD V+Y  LL+   +N    +A+++   +   N  
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+    I+ID   +    +DA  LF ++   G+ P+V +YN +     +  L  EA  L
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M       +  TYNT+ + + ++ E  +A  L++EM  RG   +  T + ++ +   
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576

Query: 312 AGKLDRA 318
            G LD++
Sbjct: 577 DG-LDQS 582



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 4/266 (1%)

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y   +   DA   F  M  M   PS+V +  +L    + + +   + L R M    I  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V T N +I  +        A +++ ++   G +P+  +++T+I      G++  A  LF 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAG 379
           K+   G + D V+Y T+I    + G  + A RLL  +     QP+ +   T I  L +  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +  +A  +F +    G   +I     ++       ++ +V  +  +M  +   P++  + 
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 440 LVLNSYGKLREFETADDLYSEMQEEG 465
            V+++  K      A D+   M + G
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSG 314



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 1/150 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L  I E +   P +  Y +V+  + RA + E A  LF  +  +G+ P+ +TY+ +
Sbjct: 442 KAMALLKAI-EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIM 500

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
                K G+ D A     +M+++  S D   Y+ + +   + ++ S+AI +   + + G 
Sbjct: 501 THGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGF 560

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
             D+     ++ +     L +     +E+M
Sbjct: 561 SCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 252/558 (45%), Gaps = 53/558 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK----- 66
           E++ SP+VF YN+++R    A   ++A  LFD+M  +G  P+  TY+TLI  + K     
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257

Query: 67  -----------EGMFDSAISW-------------------LQQMEQDRVSGDLVLYSNLI 96
                      +G+  + IS+                   L +M +   S D V Y+ LI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +   K  ++ +A+ + + +   G+ P ++ Y ++I+   KA     A   +++MR +G+ 
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+  +Y+TL++ + +     EA  V  EMN+      + T N +I+ +      +DA  +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M++ G+ P VVSY+T+L  +  +    EA+ + R M  K I+ + +TY+++I+ + +
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
               ++A +L +EM   G+ P+  TY+ +I  +   G L++A  L  ++   GV  D V 
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-TAITILARAGRIEEATWVFRQAFDAG 395
           Y  +I    +      AKRLL +L    ++P + T  T++     IE  + V        
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV-------S 610

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            +K   + G M E            +VFE M    + PD     ++++ + +  +   A 
Sbjct: 611 LIKGFCMKGMMTE----------ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
            LY EM + G +        ++         N L S+   +     +++ E   V+  I 
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720

Query: 516 ERANRLNDASRIMNRMNK 533
            R   ++    ++  M K
Sbjct: 721 HREGNMDVVLDVLAEMAK 738



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 189/417 (45%), Gaps = 41/417 (9%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-FKEARLLIEEMREQGVKPDT 159
           +LS   KA+SI    ++ G +P +++YN +++   ++K     A  + +EM E  V P+ 
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV 205

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +Y+ L+  +        AL++F +M    C  ++ T N +ID Y +L    D  +L  S
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G++P+++SYN ++          E   +   M R+    + VTYNT+IK Y K   
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A  +  EM   G+ P+ ITY+++I    KAG ++RA     ++R  G+  +   Y T
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385

Query: 340 MIVAYERVGLVAHAKRLLHELR-------------------------------------- 361
           ++  + + G +  A R+L E+                                       
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+ +   T ++   R+  ++EA  V R+  + G   D   +  +I+ F   ++     
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +++E+M   G  PD      ++N+Y    + E A  L++EM E+G V  D V + +L
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-VLPDVVTYSVL 561



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 26/320 (8%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L+ + E+   SP V +Y+ VL    R+   + A  +  EM ++GI PD  TYS+LI
Sbjct: 434 AIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F ++     A    ++M +  +  D   Y+ LI       D  KA+ + + +   G++
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 122 PDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLL----NL-------- 168
           PD+V Y+ +IN   K    +EA RLL++   E+ V P  V+Y TL+    N+        
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSL 611

Query: 169 ---YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
              +       EA  VF  M   N   D T  NIMI  + +    + A  L+  M K G 
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671

Query: 226 DPSVVSYNTLLRVYGEA----ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
               V+   L++   +     EL    +H+ R  +  E EQ  V    +++I  +    +
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV----LVEINHREGNMD 727

Query: 282 KATNLMQEMQNRGIEPNAIT 301
              +++ EM   G  PN I+
Sbjct: 728 VVLDVLAEMAKDGFLPNGIS 747


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 219/469 (46%), Gaps = 6/469 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + S  V +Y  V++ +  +K+ + A  LF+E++  G +P+   Y+ +I    K G  +  
Sbjct: 103 KASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDG 162

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +   ++M           Y+ +I+   K      A  +F ++   G VPD + Y T+I+ 
Sbjct: 163 LKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 222

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F KA    EAR L++ M  +G +P  V+Y ++++ + +     EA  V A+M E  C   
Sbjct: 223 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 282

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L     ++  Y     A++A ++   M   G  P V+ Y +L+ +        EA H+F 
Sbjct: 283 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 342

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K    + +TY T+I+ + K    E A  +++ M   G+ P+   Y++++  + K  
Sbjct: 343 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-- 371
           ++D+A  ++ ++ +SG++ + V +  ++    + G    A  L  E+ +   +P      
Sbjct: 403 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSY 462

Query: 372 ---ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I  L +AGR+ EA   F++  D G + +   +  +I   ++  +     ++ E M  
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 522

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G  PD    + ++         +TA D++ EM + GC   ++V +++L
Sbjct: 523 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA-PNEVTYKVL 570



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 219/489 (44%), Gaps = 51/489 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +YN V+  +    + + A+  F+ M   G  PD   ++TLI  F K G        
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSD----YSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           L Q  + R   D+ LY+++I    K  D    Y +A++  + L       D+++Y T+I 
Sbjct: 65  LNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL-------DVISYTTVIK 116

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               +K   EA  L EE++  G  P+ V+Y+ +++  ++  +  + L  F EM+  +C  
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             TT  ++ID   +  M  DA ++F  M + G  P  ++Y TL+  + +A    EA  L 
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M  K  E   VTY +++  + K     +A  ++ +M+ RG EP    ++++++ +   
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G+ + A  +  ++ + G   D +LY ++                               I
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSL-------------------------------I 325

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
            +L   GR+ EA  VF    + G   D   +G +I+ FS+        E+ E M  +G  
Sbjct: 326 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD------F 486
           PD      +++ Y KL   + A  +Y  M   G +  + V F +L ++G  KD      F
Sbjct: 386 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG-IKPNAVTFNVL-MHGLFKDGKTDRAF 443

Query: 487 NMLESLFER 495
           ++ + + E+
Sbjct: 444 SLFKEMLEK 452



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/456 (21%), Positives = 207/456 (45%), Gaps = 9/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V A+  ++    +A Q ++ H L ++  +R   PD + Y+++I  + K G  D+   +
Sbjct: 40  PDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG--Y 96

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + +   + S D++ Y+ +I+         +A  +F  LK++G  P++VAY  +I+   K
Sbjct: 97  FRAVTP-KASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLK 155

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   ++     EEM      P   +Y+ +++   +     +A  VF +M +  C  D  T
Sbjct: 156 AGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 215

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID + +     +A +L   M   G +P+ V+Y +++  + + ++  EA  +   M+
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +  E  +  + +++  Y      E+A  ++ EM  RG  P+ I Y+++I +    G++ 
Sbjct: 276 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 335

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A  +F  +   G   D + Y T+I  + ++G V  A  +L  + +    P   A   L 
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  R+++A  V+ +   +G   +   F  ++    ++ K      +F++M      
Sbjct: 396 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEV 455

Query: 433 PDSHI-IALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P + +   ++++  GK      A   + EM + G +
Sbjct: 456 PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGII 491



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y VV+  + +A+    A  +F++M Q+G  PD  TY+TLI  F K    D A   
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M         V Y +++    KL   ++A  + ++++  G  P L  + ++++ +  
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  ++ EM  +G  PD + Y++L++L     +  EA  VF  M E  C  D  T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE----LFG------ 246
              +I  + ++   + A  +   M K G+ P   +YN+L+  Y + E     FG      
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415

Query: 247 -------------------------EAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                                     A  LF+ +++++E+   +V+Y  +I   GK+   
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A    QEM +RGI P   TY+++I    KAG++  A  L + +   GV  D   Y  +
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQAFDAG 395
           I       +V  A  +  E+ +    P E    +L R    AGR  +   V +Q F  G
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV-KQHFSQG 593



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 10/319 (3%)

Query: 6   LDWINE---------EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT 56
           LD INE         E    P +F +  +L   L   + E A+ +  EM  RG APD   
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 320

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y++LI      G    A      M +   + D + Y  +I+   K+ +   A  I   + 
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            SG+ PD  AYN++++ + K +   +A  + + M   G+KP+ V+++ L++   ++ K  
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440

Query: 177 EALSVFAEMNEVN-CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            A S+F EM E    P  L +  I+ID  G+     +A   F  M   GI P   +Y +L
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSL 500

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +A    EA  L   M +  +  +V  Y+ +I     S   + A ++ QEM  RG 
Sbjct: 501 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 560

Query: 296 EPNAITYSTIIAIWGKAGK 314
            PN +TY  +   +  AG+
Sbjct: 561 APNEVTYKVLRRGFRAAGR 579



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 37/294 (12%)

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           MG +P++VSYNT++      +   EA   F  M     E +V+ + T+I  + K+ + + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAG----------------------------- 313
              L+ +   R   P+   Y+++I  + KAG                             
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 314 ---KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
              ++D A  LF++L+++G   + V Y  +I    + G +    +   E+   + +P  T
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 371 AITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             T+    L +A  + +A  VF Q    G V D   +  +I+ FS+  K     ++ + M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            + G  P +     +++ + KL     A ++ ++M+E GC     +   +LS Y
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 39/278 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y  ++  +    +   A  +FD M ++G APD  TY T+I  F K G  ++A  
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD------------ 123
            L+ M +  V  D   Y++L++   KL    +A  ++ R+ +SGI P+            
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434

Query: 124 ------------------------LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
                                   LV+Y  +I+  GKA    EA L  +EM ++G+ P+ 
Sbjct: 435 KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPEC 494

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +Y++L+    +  +  EA  +  +M ++    D+   + +I       M   A  +F  
Sbjct: 495 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 554

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           M K G  P+ V+Y  L R +  A   G A+ L  + Q 
Sbjct: 555 MMKRGCAPNEVTYKVLRRGFRAA---GRALDLEAVKQH 589



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ ++   + E+    P++ +Y +++  + +A +   A   F EM  RGI P+ +TY++L
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSL 500

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G    A   ++ M +  V+ D+  YS LI      S    A  +F  +   G 
Sbjct: 501 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 560

Query: 121 VPDLVAYNTM 130
            P+ V Y  +
Sbjct: 561 APNEVTYKVL 570


>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Brachypodium distachyon]
          Length = 858

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 241/490 (49%), Gaps = 34/490 (6%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           +LA   FD     G     +  S LI+ + + G+ + A+  L+ M+   +    V Y+ +
Sbjct: 215 DLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAV 274

Query: 96  IELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           I+   K   D    +  F ++    + PD   +N++++   +A   ++AR L +EM   G
Sbjct: 275 IDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLG 334

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  D  +Y+T ++   +      A+ V  +M   N   ++ T + +ID Y +L+   +A 
Sbjct: 335 IGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEAL 394

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +L+  M+ +GI    V YNT+L +Y +A  +GE   +   M+   IE++ VTYN++I  Y
Sbjct: 395 KLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGY 454

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           GK    +  + L+Q+M+ RG+ P+ +TYST+I I+ KAG    A  ++   + SG++ D 
Sbjct: 455 GKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDV 514

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           VL+ + I    + GLV  A  LL+++ +    PN +   T I    ++  + E      +
Sbjct: 515 VLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE------E 568

Query: 391 AFDAGEVKDISVF-GCMIEL--------------FSRNKKYANVIEVFEKMRSAGYFPDS 435
             +AGE+  + V+ G +I                  R+++   ++E+F+KM   G  P+ 
Sbjct: 569 DPEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNV 628

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY-GARKDFNMLESLFE 494
              + +LN+  +   FE A  L  +++    +F + V+     L  G ++ ++  +SLF 
Sbjct: 629 VTFSAILNACSRCNNFEDAALLLEQLR----LFDNFVYGVAYGLLMGYQEIWSQAQSLFN 684

Query: 495 ---RLDSDSN 501
              R+DS ++
Sbjct: 685 QLGRMDSPTS 694



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 44/357 (12%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P    +N +L    RA   E A  LFDEM   GI  D YTY+T I    K G  + A
Sbjct: 299 RLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELA 358

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +  L  ME   V  ++V YS LI+   KL  Y +A+ ++ ++KS GI  D V YNT++ +
Sbjct: 359 MQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAI 418

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + KA  + E  ++ +EM + G++ DTV+Y++L+N Y +  +      +  +M        
Sbjct: 419 YVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPS 478

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + +ID+Y +  M  DA  ++   ++ G+ P VV +++ +    +  L   A+ L  
Sbjct: 479 VLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLN 538

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKS--LEHE------------------KATN-------- 285
            M    I+ NVVTYNT+I  +GKS  L  E                  +A N        
Sbjct: 539 DMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSA 598

Query: 286 ----------------LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
                           L Q+M  +G+ PN +T+S I+    +    + AA+L ++LR
Sbjct: 599 IDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLR 655



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 12/297 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E++        YN ++    +  + ++   L  +MR+RG+AP   TYSTLI  + K GM 
Sbjct: 436 EDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMH 495

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +     ++  +  D+VL+S+ I+   K      A+S+ + +   GI P++V YNT+
Sbjct: 496 GDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTI 555

Query: 131 INVFGKAKLFKEARLLIEEMREQGV---------KPDTVSYSTLLNLYVENHKFVEALSV 181
           I+ FGK+K+  E      EM   GV          P T   S +      + +    L +
Sbjct: 556 IDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILEL 615

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M +     ++ T + +++   + +  +DA  L   +R        V+Y  L+   G 
Sbjct: 616 FQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNFVYGVAYGLLM---GY 672

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            E++ +A  LF  + R +   +   YN +  +     + + A  ++ E  NR +  N
Sbjct: 673 QEIWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQLVVLEGVNRRVWDN 729



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 126/285 (44%), Gaps = 5/285 (1%)

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I   G++     A R F +    G   +V + + L+  Y  + L  EA+ +   M+   +
Sbjct: 205 IGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGL 264

Query: 261 EQNVVTYNTMIKIYGKSLEHEKAT-NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
               VTYN +I   GK     + T    ++M    + P+  T++++++   +AG L+ A 
Sbjct: 265 RPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDAR 324

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
            LF ++   G+  D   Y T I A  + G +  A ++L ++     +PN +   T I   
Sbjct: 325 ALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGY 384

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           ++  + +EA  ++ +    G   D   +  ++ ++ +  KY  +  V ++M  +G   D+
Sbjct: 385 SKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDT 444

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
                ++N YGK    +    L  +M+  G   S   +  ++ +Y
Sbjct: 445 VTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIY 489


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 203/421 (48%), Gaps = 4/421 (0%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           + + R    V AY  V+  +LR  Q + A+ LFD M  RG +PD  TYS++I+   K   
Sbjct: 199 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 258

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A     +M ++ V  D ++Y++L+          +AI IF ++   G+ PD+V Y  
Sbjct: 259 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 318

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++   K     EAR + + + ++G KPD+ +Y TLL+ Y      VE   +   M +  
Sbjct: 319 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             L     N+++  Y + +   +A  +F +MR+ G++P +V+Y T+L +   A    +A+
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             F  ++ + +  N+V + T+I       + +K   L  EM +RGI  + I ++ I+   
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K G++  A  LF  +   G+E +   Y T+I  Y   G +  A +LL  +     +P+ 
Sbjct: 499 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 558

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I   ++ GRIE+   + R+    G    I  +  +++   +  +     E++ +
Sbjct: 559 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLR 618

Query: 426 M 426
           M
Sbjct: 619 M 619



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 184/438 (42%), Gaps = 33/438 (7%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM--EQDRVSGDLVLYSNLIELARKL 102
           M + G  PD ++Y+ L+     +     A+  L  M   + R   D+V Y+ +I    + 
Sbjct: 162 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 221

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
               KA S+F  +   G  PD+V Y+++I+   K +   +A  +   M + GV PD + Y
Sbjct: 222 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 281

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           ++L++ Y  + K  EA+ +F +M       D+ T   ++D   +   + +A ++F S+ K
Sbjct: 282 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P   +Y TLL  Y       E   L  LM +K ++     +N ++  Y K  + ++
Sbjct: 342 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 401

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  +   M+ +G+ P+ + Y T++ I   AG++D A   F  L+S G+            
Sbjct: 402 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA----------- 450

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
                               PN +   T I  L    + ++   +  +  D G   D   
Sbjct: 451 --------------------PNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 490

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  ++    +  +      +F+ M   G  P+++    +++ Y    + + A  L   M 
Sbjct: 491 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV 550

Query: 463 EEGCVFSDQVHFQMLSLY 480
             G   SD  +  +++ Y
Sbjct: 551 FNGVKPSDVTYNTIINGY 568



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/469 (21%), Positives = 185/469 (39%), Gaps = 81/469 (17%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI---APDRYTYSTLITCFGKEGMFDSAI 74
           S+F  N  L +V RA    +A  LF+ M + G    AP+  TY  +I C  + G  D A 
Sbjct: 61  SIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAF 119

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + + +          V+ + L      L   S+                      +    
Sbjct: 120 ATVGR----------VITTGLRHEPNPLQSSSQG--------------------PLCTAG 149

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNCPL 192
           G+A       +++  M E G KPD  SY+ LL    ++    +AL +   M  ++  CPL
Sbjct: 150 GRAMRMD---IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 206

Query: 193 DLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D+     +I+     GQLD A     LF +M   G  P VV+Y++++    + +   +A 
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYS---LFDAMLDRGPSPDVVTYSSIISALSKTQAMDKAT 263

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  M +  +  + + Y +++  Y  S + ++A  + ++M   G+EP+ +TY+ ++   
Sbjct: 264 QVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL 323

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K GK   A  +F  L   G + D   Y T++  Y   G +     LL            
Sbjct: 324 CKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLD----------- 372

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                            + ++    G      +F  ++  ++++ K    + VF  MR  
Sbjct: 373 ----------------LMMKKGMQLGH----HIFNMIMGAYAKHNKVDEALLVFSNMRQQ 412

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG-----CVFSDQVH 473
           G  PD      VL+        + A   ++ ++ EG      VF+  +H
Sbjct: 413 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 461



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 181/448 (40%), Gaps = 86/448 (19%)

Query: 93  SNLIELARKLSDYSKA-----ISIFSRLKSSGIV---PDLVAYNTMINVFGKAKLFKEAR 144
           +++ +L R LSD ++A     IS+F+R+  +G     P++  Y  +I    +      A 
Sbjct: 60  ASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAF 119

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             +  +   G++                             +E N PL  ++   +    
Sbjct: 120 ATVGRVITTGLR-----------------------------HEPN-PLQSSSQGPLCTAG 149

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQ 262
           G+   A   D +   M ++G  P + SY  LL+   + +   +A+ L  +M   +     
Sbjct: 150 GR---AMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 206

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +VV Y T+I    +  + +KA +L   M +RG  P+ +TYS+II+   K   +D+A  +F
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
            ++  +GV  D ++Y +++  Y                                 +G+ +
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGY-------------------------------CSSGKPK 295

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F++    G   D+  +  +++   +N K     ++F+ +   G+ PDS     +L
Sbjct: 296 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 355

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           + Y          DL   M ++G      + F M  + GA    N ++   E L   SN+
Sbjct: 356 HGYATEGALVEMHDLLDLMMKKGMQLGHHI-FNM--IMGAYAKHNKVD---EALLVFSNM 409

Query: 503 NKKEL------HHVVAGIYERANRLNDA 524
            ++ L      +  V  I   A R++DA
Sbjct: 410 RQQGLNPDIVNYGTVLDILCTAGRVDDA 437


>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 232/498 (46%), Gaps = 43/498 (8%)

Query: 5    ILDWINEE-ARYSPSVFA-YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
            I+D  N + +R+ P + A YN ++    +A + + A  +F EM + G+A D  T++T+I 
Sbjct: 634  IMDSSNTDGSRHKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIY 693

Query: 63   CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              G  G    A + L +ME+  +S D   Y+  + L     +   A+  + +++  G+ P
Sbjct: 694  TCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFP 753

Query: 123  DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
            D+V +  +++V  +  +  E   +I EM+   V+ D  S   ++ +YV N   ++   +F
Sbjct: 754  DVVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYV-NEGLLDKAKIF 812

Query: 183  AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
             E + +   L   T   +ID Y +  +  +A+ +F   R +G    VV YN +++ YG+A
Sbjct: 813  LEEHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKA 872

Query: 243  ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +L+ +A  LF+ M+      N  TYN++I+++      ++A +++ EMQ  G +P  +T+
Sbjct: 873  KLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTF 932

Query: 303  STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY------------------------- 337
            S +IA + + G+L  A  +++++   GV+ + V+Y                         
Sbjct: 933  SAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDE 992

Query: 338  ----------QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
                       ++I AY +VG +  AK L   ++     P+ +   + I + A  G + E
Sbjct: 993  FGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSE 1052

Query: 384  ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
            A  +F      G    +S F  M+ L+         I+V ++M+ +G+  D      V+ 
Sbjct: 1053 AKLIFDDLRQKGSADGVS-FATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASFNKVMA 1111

Query: 444  SYGKLREFETADDLYSEM 461
             Y    +     +L  EM
Sbjct: 1112 CYATNGQLSACGELLHEM 1129



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 235/558 (42%), Gaps = 96/558 (17%)

Query: 1    RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            R + + +WI  +  Y P+V  YNVVLR + RA++W+     + EM + G+ P   TY  L
Sbjct: 471  RVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGML 530

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR-------------------- 100
            +  +GK G+   A+ W++ M+   V  D V  + ++ + +                    
Sbjct: 531  VDVYGKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWCVGKV 590

Query: 101  KLSDY------------------------SKAISIFSRLKSSGIV-----------PDLV 125
            +L D+                        ++   I  R   S I+           P L 
Sbjct: 591  ELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRHKPRLT 650

Query: 126  A-YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
            A YNT+I+++GKA   K+A  +  EM + GV  DT++++T++     +    EA ++  E
Sbjct: 651  ATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTE 710

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            M E     D  T NI + +Y        A + +  +R++G+ P VV++  +L V  E  +
Sbjct: 711  MEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNM 770

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIY------------------------------ 274
             GE   +   M+R  +  +  +   +IK+Y                              
Sbjct: 771  VGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVAI 830

Query: 275  -----GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
                  K L  E A N+    ++ G + + + Y+ ++  +GKA   D+A  LF+ +R+ G
Sbjct: 831  IDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHG 889

Query: 330  VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
               +   Y ++I  +    LV  A+ +L E++    +P  +     I   AR GR+ +A 
Sbjct: 890  TWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAV 949

Query: 386  WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             V+ +    G   +  V+G +I  FS        +  F KM   G   +  ++  ++ +Y
Sbjct: 950  GVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY 1009

Query: 446  GKLREFETADDLYSEMQE 463
             K+   E A  LY  M++
Sbjct: 1010 SKVGCLEGAKTLYEGMKD 1027



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/605 (20%), Positives = 244/605 (40%), Gaps = 78/605 (12%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            EE   SP    YN+ L         + A   + ++R+ G+ PD  T+  ++    +  M 
Sbjct: 712  EERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMV 771

Query: 71   DSAISWLQQMEQDRVSGD-------LVLYSN---------------------------LI 96
                + + +M++ RV  D       + +Y N                           +I
Sbjct: 772  GEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVAII 831

Query: 97   ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
            +   +   +++A ++F   +  G   D+V YN M+  +GKAKL+ +A  L + MR  G  
Sbjct: 832  DAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTW 891

Query: 157  PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
            P+  +Y++L+ ++       EA  + AEM ++       T + +I  Y +L    DA  +
Sbjct: 892  PNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGV 951

Query: 217  FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            +  M ++G+ P+ V Y +L+  + E     EA+  FR M    I  N +   ++IK Y K
Sbjct: 952  YEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSK 1011

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                E A  L + M++    P+ +  +++I ++   G +  A ++F  LR  G   D V 
Sbjct: 1012 VGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKG-SADGVS 1070

Query: 337  YQTMIVAYERVGLVAHAKRLLHELRQ---------------------------------- 362
            + TM+  Y+ +G++  A  +  E++Q                                  
Sbjct: 1071 FATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHEMI 1130

Query: 363  -----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                 P+T   +   T+L + G   EA      ++  G  K  +    +  +FS    +A
Sbjct: 1131 SRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEG--KPYARQAVITSVFSTVGLHA 1188

Query: 418  NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              +E  E   +A    DS    + + +YG     + A  ++ +MQ+EG       +  + 
Sbjct: 1189 FALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLA 1248

Query: 478  SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
              YG       L+ ++ +L        + L   +   Y  A R + A  +   M  +  F
Sbjct: 1249 GCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEM--KFAF 1306

Query: 538  NSSLV 542
            +++++
Sbjct: 1307 DTTML 1311



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/510 (21%), Positives = 220/510 (43%), Gaps = 78/510 (15%)

Query: 22  YNVVLRNVLRAKQWEL-------AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ VL ++LRA + E        + G      Q  I  ++ ++  ++  F          
Sbjct: 427 YSGVLPSILRALESEXNIEDTLSSCGKLSPKEQTVILKEQSSWERVLRVF---------- 476

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            W++  E D V  +++ Y+ ++ +  +   + +    +  +  +G++P    Y  +++V+
Sbjct: 477 EWIKSQE-DYVP-NVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGMLVDVY 534

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GKA L KEA L I+ M+ +GV PD V+ +T++ +  +  +F  A   + +       L  
Sbjct: 535 GKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWCVGKVELGD 594

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWS--MRKMG--------IDPS-----------VVSYN 233
                + D   ++  A  + + F S  + K+G        +D S             +YN
Sbjct: 595 FDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRHKPRLTATYN 654

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TL+ +YG+A    +A  +F  M +  +  + +T+NTMI   G      +A  L+ EM+ R
Sbjct: 655 TLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEMEER 714

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           GI P+  TY+  ++++   G +D A   ++K+R  G+  D V ++ ++       +V   
Sbjct: 715 GISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMVGEV 774

Query: 354 KRLLHELRQP------NTIP--------------------------------RETAITIL 375
           + ++ E+++       ++IP                                R   I   
Sbjct: 775 ETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVAIIDAY 834

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           A  G   EA  VF    D G+ KD+  +  M++ + + K Y     +F+ MR+ G +P+ 
Sbjct: 835 AEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNE 894

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
                ++  +      + A D+ +EMQ+ G
Sbjct: 895 STYNSLIQMFSGGDLVDEARDILAEMQKMG 924


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 4/385 (1%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           + + R    V AY  V+  +LR  Q + A+ LFD M  RG +PD  TYS++I+   K   
Sbjct: 198 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 257

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A     +M ++ V  D ++Y++L+          +AI IF ++   G+ PD+V Y  
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++   K     EAR + + + ++G KPD+ +Y TLL+ Y      VE   +   M +  
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 377

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             L     N+++  Y + +   +A  +F +MR+ G++P +V+Y T+L +   A    +A+
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             F  ++ + +  N+V + T+I       + +K   L  EM +RGI  + I ++ I+   
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K G++  A  LF  +   G+E +   Y T+I  Y   G +  A +LL  +     +P+ 
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557

Query: 366 IPRETAITILARAGRIEEATWVFRQ 390
           +   T I   ++ GRIE+   + R+
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLRE 582



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 206/458 (44%), Gaps = 11/458 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI---APDRYTYSTLITCFGKEGMFDSAI 74
           S+F  N  L +V RA    +A  LF+ M + G    AP+  TY  +I C  + G  D A 
Sbjct: 61  SIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAF 119

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
           + + ++    +    +L+S L++        S A+ I   R+   G  PDL +Y  ++  
Sbjct: 120 ATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKG 179

Query: 134 FGKAKLFKEARLLIEEMRE-QGVKP-DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K  ++A  L+  M + +G  P D V+Y+T++N  +   +  +A S+F  M +    
Sbjct: 180 LCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 239

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + +I    +      A ++F  M K G+ P  + Y +L+  Y  +    EAI +
Sbjct: 240 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 299

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M R  +E +VVTY  ++    K+ +  +A  +   +  RG +P++ TY T++  +  
Sbjct: 300 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT 359

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G L     L   +   G+++   ++  ++ AY +   V  A  +   +RQ    P+ + 
Sbjct: 360 EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN 419

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T + IL  AGR+++A   F      G   +I VF  +I       K+  V E+  +M 
Sbjct: 420 YGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI 479

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G   D+     ++ +  K      A +L+  M   G
Sbjct: 480 DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 517



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 36/475 (7%)

Query: 9   INEEARYSPSVFAYNVVLRNVL-RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           I    R SP +F+   +L+ +  R +  +    +   M + G  PD ++Y+ L+     +
Sbjct: 126 ITTGLRMSPILFS--PLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDD 183

Query: 68  GMFDSAISWLQQM--EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
                A+  L  M   + R   D+V Y+ +I    +     KA S+F  +   G  PD+V
Sbjct: 184 KTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVV 243

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y+++I+   K +   +A  +   M + GV PD + Y++L++ Y  + K  EA+ +F +M
Sbjct: 244 TYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 303

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  D+ T   ++D   +   + +A ++F S+ K G  P   +Y TLL  Y      
Sbjct: 304 CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGAL 363

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            E   L  LM +K ++     +N ++  Y K  + ++A  +   M+ +G+ P+ + Y T+
Sbjct: 364 VEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV 423

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           + I   AG++D A   F  L+S G+                                PN 
Sbjct: 424 LDILCTAGRVDDALSQFNSLKSEGLA-------------------------------PNI 452

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I  L    + ++   +  +  D G   D   F  ++    +  +      +F+ 
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           M   G  P+++    +++ Y    + + A  L   M   G   SD  +  +++ Y
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 567



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 149/309 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y  ++  + +  +   A  +FD + +RG  PD  TY TL+  +  EG        
Sbjct: 310 PDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDL 369

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  +     +++ ++    K +   +A+ +FS ++  G+ PD+V Y T++++   
Sbjct: 370 LDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCT 429

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    +A      ++ +G+ P+ V ++TL++      K+ +   +  EM +    LD   
Sbjct: 430 AGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 489

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +     +A  LF  M ++GI+P+  +YNTL+  Y       EA+ L  +M 
Sbjct: 490 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV 549

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + VTYNT+I  Y ++   E    L++EM  +G+ P  +TY  ++    +AG+  
Sbjct: 550 FNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTV 609

Query: 317 RAAMLFQKL 325
            A  L+ ++
Sbjct: 610 AAKELYLRM 618



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 189/459 (41%), Gaps = 53/459 (11%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--ISWLQQMEQ---DRV 85
           RA +   AH +FD + +RG   DR +   L            A  IS   +M +      
Sbjct: 39  RATEPGDAHQVFDRLLKRG---DRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSA 95

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA-R 144
           + ++  Y  +I   R+L     A +   R+ ++G+    + ++ ++      +   +A  
Sbjct: 96  APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNCPLDLTTCNIMID 202
           +++  M E G KPD  SY+ LL    ++    +AL +   M  ++  CPLD+     +I+
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215

Query: 203 VY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
                GQLD A     LF +M   G  P VV+Y++++    + +   +A  +F  M +  
Sbjct: 216 GLLREGQLDKAYS---LFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  + + Y +++  Y  S + ++A  + ++M   G+EP+ +TY+ ++    K GK   A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            +F  L   G + D   Y T++  Y   G +     LL                      
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLD--------------------- 371

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                  + ++    G      +F  ++  ++++ K    + VF  MR  G  PD     
Sbjct: 372 ------LMMKKGMQLGH----HIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 421

Query: 440 LVLNSYGKLREFETADDLYSEMQEEG-----CVFSDQVH 473
            VL+        + A   ++ ++ EG      VF+  +H
Sbjct: 422 TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 180/448 (40%), Gaps = 87/448 (19%)

Query: 93  SNLIELARKLSDYSKA-----ISIFSRLKSSGIV---PDLVAYNTMINVFGKAKLFKEAR 144
           +++ +L R LSD ++A     IS+F+R+  +G     P++  Y  +I    +      A 
Sbjct: 60  ASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAF 119

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             +  +   G++   + +S LL    +  +  +A+                         
Sbjct: 120 ATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAM------------------------- 154

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM--QRKEIEQ 262
                    D +   M ++G  P + SY  LL+   + +   +A+ L  +M   +     
Sbjct: 155 ---------DIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 205

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +VV Y T+I    +  + +KA +L   M +RG  P+ +TYS+II+   K   +D+A  +F
Sbjct: 206 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 265

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
            ++  +GV  D ++Y +++  Y                                 +G+ +
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGY-------------------------------CSSGKPK 294

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F++    G   D+  +  +++   +N K     ++F+ +   G+ PDS     +L
Sbjct: 295 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 354

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           + Y          DL   M ++G      + F M  + GA    N ++   E L   SN+
Sbjct: 355 HGYATEGALVEMHDLLDLMMKKGMQLGHHI-FNM--IMGAYAKHNKVD---EALLVFSNM 408

Query: 503 NKKEL------HHVVAGIYERANRLNDA 524
            ++ L      +  V  I   A R++DA
Sbjct: 409 RQQGLNPDIVNYGTVLDILCTAGRVDDA 436


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 223/470 (47%), Gaps = 10/470 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS+   N +L+++LRA    L   + + M   GI+PD YTYSTLI  + K   FD+A  
Sbjct: 206 APSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKK 265

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M +     + V Y+ LI    +     +A      ++  G+VPD   Y  +IN   
Sbjct: 266 VLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLC 325

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLDL 194
           K++   EA+ L++EM    +KP+ V Y+ L++ ++      EA  +  EM      P  +
Sbjct: 326 KSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 385

Query: 195 TTCNIM--IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T  N++  +   GQ+D A     L   M +    P  ++YN ++  +       +A  L 
Sbjct: 386 TYDNLVRGLCKMGQMDRAS---LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 442

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+   I  NV TY+ MI    +S E EKA++L++EM  +G++PNA  Y+ +I+ + + 
Sbjct: 443 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 502

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           G +  A  +F K+    V  D   Y ++I    +VG V  + +   ++++   +P E   
Sbjct: 503 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 562

Query: 373 TILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           + L       G +E A  + ++  D G   +  ++  ++E + ++     V   F+ M  
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            G   D+ I  +++++       E A  + S +++ G V    V+  ++S
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 197/444 (44%), Gaps = 31/444 (6%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YNV++  + R+   E A G   +M   G+ PD +TY  LI    K    + A + L +M 
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V+Y+NLI+   +  +  +A  +   + ++G+ P+ + Y+ ++    K     
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A LL+++M     +PDT++Y+ ++  +  +H   +A  + +EM       ++ T +IMI
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               Q    + A  L   M   G+ P+   Y  L+  Y        A  +F  M +  + 
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 521

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++  YN++I    K    E++T    +MQ RG+ PN  TYS +I  + K G L+ A  L
Sbjct: 522 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 581

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            Q++  +G++ + V+Y  ++ +Y                                ++  I
Sbjct: 582 VQRMLDTGLKPNDVIYIDLLESY-------------------------------FKSDDI 610

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+ +  F+   D G + D  ++G +I   S +        V   +   G  PD H+ + +
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           ++   K  + E A  +  EM ++G
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKG 694



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 210/457 (45%), Gaps = 38/457 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP+V+ Y++++  + ++ + E A  L +EM  +G+ P+ + Y+ LI+ + +EG  
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M +  V  DL  Y++LI    K+    ++   F++++  G++P+   Y+ +
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ + K    + A  L++ M + G+KP+ V Y  LL  Y ++    +  S F  M +   
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD     I+I         + A R+   + K G  P V  Y++L+    +     +A  
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M +K ++ N+V YN +I    KS +   A N+   +  +G+ PN +TY+++I    
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G +  A  L+ ++ ++G+  D  +Y  +                              
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVL------------------------------ 775

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             T  + AG +E+A ++  + F  G    IS F  +++ F +  K    +++   +   G
Sbjct: 776 -TTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833

Query: 431 YFPDSHIIALV---LNSYGKLREFETADDLYSEMQEE 464
             P++  I  +   L+  GKL E  T   ++ E+Q++
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHT---IFVELQQK 867



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 213/462 (46%), Gaps = 5/462 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A+LD ++  A   P+V  Y  ++   +R    + A  +  EM   G+ P++ TY  L+  
Sbjct: 335 ALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  D A   L+QM +D    D + Y+ +IE   +      A  + S ++++GI P+
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  Y+ MI+   ++   ++A  L+EEM  +G+KP+   Y+ L++ Y        A  +F 
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M +VN   DL   N +I    ++   +++ + F  M++ G+ P+  +Y+ L+  Y +  
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A  L + M    ++ N V Y  +++ Y KS + EK ++  + M ++G+  +   Y 
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            +I     +G ++ A  +   +  +G   D  +Y ++I    +      A  +L E+ + 
Sbjct: 634 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              PN +     I  L ++G I  A  VF      G V +   +  +I+   +    +N 
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
             ++ +M + G  PD+ + +++        + E A  L  EM
Sbjct: 754 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 204/471 (43%), Gaps = 31/471 (6%)

Query: 51  APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS----------------- 93
           APD + +  +  C G   +F+ A   L +M +   S  +VL S                 
Sbjct: 121 APDAFAHLAMSLCAGS--LFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLD 178

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE- 152
            L++  +K      A  +   ++  G+ P +   N ++    K  L  +A  L+ ++RE 
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALL----KDLLRADAMALLWKVREF 234

Query: 153 ---QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
               G+ PD  +YSTL+  Y +  +F  A  V  EM E  C L+  T N++I    +   
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            ++A      M   G+ P   +Y  L+    ++    EA  L   M   E++ NVV Y  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  + +    ++A  +++EM   G++PN ITY  ++    K G++DRA++L +++    
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
              D + Y  +I  + R      A RLL E+      PN       I  L ++G  E+A+
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +  +    G   +  V+  +I  + R    +   E+F+KM      PD +    ++   
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            K+   E +   +++MQE G + ++  +  ++  Y    D    E L +R+
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 21/339 (6%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y +++ N+  +   E A  +   + + G  PD + YS+LI+   K    + A   L +M 
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  V  ++V Y+ LI+   K  D S A ++F+ + + G+VP+ V Y ++I+   K     
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L  EM   G+ PD   YS L           +A+ +  EM  +     +++ N ++
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF-LRGHASISSFNNLV 810

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D + +    ++  +L   +   G+ P+ ++   ++    EA    E   +F  +Q+K  E
Sbjct: 811 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 870

Query: 262 QNVVTYNT------------------MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
                +++                  MI+ + K    +KA  L   +  +       +Y 
Sbjct: 871 SAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYL 930

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
            I+    + GKL  A  L +++   G  I P   Q +I+
Sbjct: 931 AIVDNLCRKGKLSEALNLLKEMDKRG--ICPSENQCLIL 967



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 21/301 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y+ ++  + +    E A G+ DEM ++G+ P+   Y+ LI    K G    A + 
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +    +  + V Y++LI+ + K+ D S A  +++ + ++GI PD   Y+ +      
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNEVNCPLDLT 195
           A   ++A  LIEEM  +G      S++ L++ + +  K  E L +    M     P  LT
Sbjct: 782 AGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 840

Query: 196 TCNIM--------------IDVYGQLDMAKDADR----LFWSMRKMGIDPSVVSYNTLLR 237
             NI+              I V  Q   ++ A R    LF  M   G  P  V  + ++R
Sbjct: 841 IENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV-VDDMIR 899

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            + +     +A+ L  ++  K       +Y  ++    +  +  +A NL++EM  RGI P
Sbjct: 900 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959

Query: 298 N 298
           +
Sbjct: 960 S 960


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 224/488 (45%), Gaps = 42/488 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y++++    +    + A  LF E + +    +   YS +I    + G  D A   +
Sbjct: 320 TVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELV 379

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++ME+D +   + +Y +++     + D  K + +F RLK  G  P +++Y  +IN++ K 
Sbjct: 380 REMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKV 439

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               +A  + +EM   G+K +  +YS L+N ++  H F  A S+F +M +     D    
Sbjct: 440 GKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 499

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N++++ + ++     A R+F  M+K  + PS  ++  ++  +  A     A     LM+R
Sbjct: 500 NLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRR 559

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                 V+TYN +I    +  + EKA +++ +M   GI PN  TY+ I+  +  +G + +
Sbjct: 560 SGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 619

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVA---------------------------------- 343
           A   F K++ SG+++D  +Y+T++ A                                  
Sbjct: 620 AFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID 679

Query: 344 -YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            + R G V  A  LL ++++    PN     + I    +AG ++ A  V ++  D G   
Sbjct: 680 GWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKP 739

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS---HIIALVLNSYGKLREFETAD 455
           ++  F  +I+ ++R       ++ FE+M+SAG  PD    H +   L S   + E  T  
Sbjct: 740 NVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYT 799

Query: 456 DLYSEMQE 463
            ++S  +E
Sbjct: 800 GIFSVCRE 807



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 187/393 (47%), Gaps = 10/393 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + P++ +Y  ++   ++  +   A  +  EM   GI  +  TYS LI  F     F
Sbjct: 418 KECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDF 477

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A S  + M +  +  D  +Y+ L+E   K+ +  +AI IF R++   + P    +  +
Sbjct: 478 ANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPI 537

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  A   K A   ++ MR  G  P  ++Y+ L++  V  H+  +A+SV  +M+    
Sbjct: 538 IEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGI 597

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T  I++  Y        A   F  +++ G+   V  Y TLLR   ++     A+ 
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + R M  ++I +N   YN +I  + +  +  +A +L+++M+  GI PN  T+++ I    
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACC 717

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KAG + RA  + Q++   G++ +   + T+I  + RV L   A +   E++     P E 
Sbjct: 718 KAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEA 777

Query: 371 A-----ITILARAGRIEEATW-----VFRQAFD 393
           A      ++L+RA  +E +T+     V R+ F+
Sbjct: 778 AYHCLVTSLLSRATVMEGSTYTGIFSVCREMFE 810



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/444 (20%), Positives = 201/444 (45%), Gaps = 14/444 (3%)

Query: 26  LRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
            R VL  R + W+     F+ + +    P R  +  ++  + K G    A +  + M   
Sbjct: 225 FRRVLESRPEDWQAVVSAFERIPK----PSRREFGLMVVYYAKRGDKHHARATFENMRAR 280

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
            +  +  ++++L+       D   A+S    +KS GI   +V Y+ +I+ +GK    + A
Sbjct: 281 GIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSA 340

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCNIMI 201
             L +E + +    + + YS +++ + ++     A  +  EM E  ++ P+D+   + M+
Sbjct: 341 DNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVY--HSMM 398

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             Y  +   K    +F  +++ G  P+++SY  L+ +Y +     +AI + + M+   I+
Sbjct: 399 HGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIK 458

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N  TY+ +I  +    +   A ++ ++M   G++P+   Y+ ++  + K G +DRA  +
Sbjct: 459 HNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI 518

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F++++   ++     ++ +I  +   G +  A   L  +R+    P  +     I  L R
Sbjct: 519 FERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVR 578

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
             ++E+A  V  +   AG   +   +  ++  ++ +       E F K++ +G   D +I
Sbjct: 579 KHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 638

Query: 438 IALVLNSYGKLREFETADDLYSEM 461
              +L +  K    ++A  +  EM
Sbjct: 639 YETLLRACCKSGRMQSALAVTREM 662



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 4/273 (1%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +  M+  Y K  +   A    + M+ RGIEPNA  +++++  +  AG +  A    ++++
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIE 382
           S G+E+  V Y  +I  Y +      A  L  E +      N I     I    ++G ++
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 373

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  + R+  + G    I V+  M+  ++  +     + VFE+++  G+ P       ++
Sbjct: 374 RAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLI 433

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           N Y K+ +   A  +  EM+  G   +++ +  +++ +    DF    S+FE +      
Sbjct: 434 NLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQ 493

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
             + +++++   + +   ++ A RI  RM K R
Sbjct: 494 PDRAIYNLLVEAFCKMGNMDRAIRIFERMQKER 526


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 44/534 (8%)

Query: 2   SVAILDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           S   L    E AR+  +P V   N VLR +  A +W+    ++ +M Q G+ P  +TY+T
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDL---VLYS-------------------NLIE 97
           L+  F K G  D A++ L+ ME  R +G L   V Y+                   +++ 
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEA-RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR 293

Query: 98  LARKLSDYS---------------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
           L++K S ++               KA ++   +++ GIVP +V YNT+I+   K    + 
Sbjct: 294 LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A++  +EMR +G+ PD ++Y++L+N Y +     +AL +F ++        + T NI+ID
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            Y +L   + A RL   M +    P V +Y  L+               F  M  K +E 
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +   YNT I           A  L +EM  RGI  + +TY+ +I    K G L  A +L+
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARA 378
            K+ + G+ +D V Y  +I A+   G +  AK +   +      P     TI      R 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +  A   FR+  + G   +   +  ++    R  +  +  + F +M   G  P+ +  
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            L+++   K   +  A  LY EM ++G       H  +   +G    ++ ++ L
Sbjct: 654 TLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYL 707


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 201/430 (46%), Gaps = 4/430 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G  ++AI  
Sbjct: 135 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 194

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ MEQ     D+V+Y+++I+   K    ++A ++FS++   GI PD+  Y ++I+    
Sbjct: 195 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K    L+ +M    + PD V +ST+++   +  K  EA  V   M       ++ T
Sbjct: 255 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 314

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D +       +A ++F +M   G  P+V+SYNTL+  Y + +   +A +LF  M 
Sbjct: 315 YNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 374

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +KE+  N VTYNT++         + A  L  EM   G  P+  TY  ++    K   LD
Sbjct: 375 QKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 434

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + +  S ++ D  +Y  +I    R G +  A+ +   L     +PN       I
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 494

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R G ++EA  +F +    G   D   +  + +   +NK+    I++ ++M + G+ 
Sbjct: 495 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 554

Query: 433 PDSHIIALVL 442
            D     L++
Sbjct: 555 ADVSTTTLLV 564



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 204/454 (44%), Gaps = 4/454 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + KQ+     L ++M   GI PD YT + LI  F        A S 
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +  +  D   ++ LI           A+ +F ++   G  P++V Y T+IN   K
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +PD V Y+++++   ++ +  EA ++F++M       D+ T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I     L   K    L   M    I P VV ++T++    +     EA  +  +M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E NVVTYN ++  +    E ++A  +   M + G  PN I+Y+T+I  + K  ++D
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
           +A  LF+++    +  + V Y T++     VG +  A  L HE+     IP      I  
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   ++EA  + +    +    DI ++  +I+   R  +     ++F  + S G  
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           P+     +++N   +    + A+ L+ EM   GC
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 189/415 (45%), Gaps = 4/415 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  Y  ++  + +      A  L   M Q    PD   Y+++I    K+     A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +   +M    +S D+  Y++LI     L ++    ++ +++ +S I+PD+V ++T+++  
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA  +++ M  +GV+P+ V+Y+ L++ +    +  EA+ VF  M       ++
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + N +I+ Y ++     A  LF  M +  + P+ V+YNTL+          +AI LF  
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       ++ TY  ++    K    ++A  L++ ++   ++P+   Y+ +I    +AG+
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L+ A  +F  L S G+  +   Y  MI    R GL+  A +L  E+      P+     T
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               L +      A  + ++    G   D+S    ++E+   +K   +V ++  +
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 164/350 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF +M  +GI+PD +TY++LI        +
Sbjct: 199 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 258

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L QM   ++  D+V++S +++   K    ++A  +   +   G+ P++V YN +
Sbjct: 259 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M   G  P+ +SY+TL+N Y +  +  +A  +F EM +   
Sbjct: 319 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N ++     +   +DA  LF  M   G  P + +Y  LL    +     EA+ 
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   ++ ++  Y  +I    ++ E E A ++   + ++G+ PN  TY+ +I    
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           + G LD A  LF ++  +G   D   Y T+     +      A +LL E+
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 186/435 (42%), Gaps = 39/435 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+S   +M         V ++ L+    K   Y    S+ +++ S GI PD+   N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 130 MINVFGK-----------AKLFK------------------------EARLLIEEMREQG 154
           +IN F             AK+ K                        +A  L ++M  +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            +P+ V+Y TL+N   +      A+ +   M + NC  D+     +ID   +     +A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            LF  M   GI P + +Y +L+        +     L   M   +I  +VV ++T++   
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K  +  +A +++  M  RG+EPN +TY+ ++       ++D A  +F  +  +G   + 
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           + Y T+I  Y ++  +  A  L  E+ Q    PNT+   T +  L   GR+++A  +F +
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G++ D++ +  +++   +       + + + +  +   PD  I  +V++   +  E
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 451 FETADDLYSEMQEEG 465
            E A D++S +  +G
Sbjct: 468 LEAARDIFSNLSSKG 482



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 7/309 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           ++  P V  ++ V+  + +  +   AH + D M  RG+ P+  TY+ L+     +   D 
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+     M  +  + +++ Y+ LI    K+    KA  +F  +    ++P+ V YNT+++
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                   ++A  L  EM   G  PD  +Y  LL+   +     EA+++   +   N   
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450

Query: 193 DLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D+    I+ID     G+L+ A+D   +F ++   G+ P+V +Y  ++       L  EA 
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARD---IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 507

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  M       +  TYNT+ +   ++ E  +A  L+QEM  RG   +  T + ++ + 
Sbjct: 508 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567

Query: 310 GKAGKLDRA 318
               KLD++
Sbjct: 568 CD-DKLDQS 575


>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
 gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 642

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 209/458 (45%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN V+  +++  Q E  H ++ EM   G   PD  TYS LI+ + K G  DS
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI    +M+ + +     +Y+ L+ +  K+    KA+ +F  +K +G  P +  Y  +I 
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    EA    ++M   G+ PD V  + L+N+  +  +  E  +VF+EM    C  
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC-- 369

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHL 251
                                             P+VVSYNT+++   E++    E    
Sbjct: 370 ---------------------------------TPTVVSYNTVIKALFESKAHVSEVSSW 396

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   +  +  TY+ +I  Y K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A + + A  LF++L+ +   +   +Y  MI  + + G ++ A  L +E++   + P   A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               ++ + +AG I EA  + R+  + G   DI+    ++  F+R       IE+FE ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +G  PD      +L  +     FE A  +  EM+++G
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 21/503 (4%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSD 104
           ++R    D  TY TLI C  +  ++      +Q++ ++  VS    + S L++   +   
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYS 163
            SKA+S+F + K     P    YN++I +  +    ++   +  EM  +G   PDT++YS
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNC--PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
            L++ Y +  +   A+ +F EM + NC  P +      ++ +Y ++   + A  LF  M+
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKD-NCMQPTE-KIYTTLLGIYFKVGKVEKALDLFEEMK 295

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G  P+V +Y  L++  G+A    EA   ++ M R  +  +VV  N ++ I GK    E
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + TN+  EM      P  ++Y+T+I A++     +   +  F K+++  V      Y  +
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +   V  A  LL E+ +    P   A    I  L +A R E A  +F++  +   
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+ F +  K +  +++F +M++ G  PD +    +++   K      A+ 
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYG----ARKDFNMLESLFERLDSDSNINKKEL-HHVV 511
           L  +M+E GC      H  +L+ +      R+   M E++       S I    + ++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KHSGIKPDGVTYNTL 590

Query: 512 AGIYERANRLNDASRIMNRMNKR 534
            G +  A    +A+R+M  M  +
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDK 613



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 12/275 (4%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAH-----GLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           R +P+V +YN V++ +  +K    AH       FD+M+   ++P  +TYS LI  + K  
Sbjct: 368 RCTPTVVSYNTVIKALFESK----AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAY 127
             + A+  L++M++         Y +LI    K   Y  A  +F  LK + G V   V Y
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-Y 482

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MI  FGK     EA  L  EM+ QG  PD  +Y+ L++  V+     EA S+  +M E
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C  D+ + NI+++ + +  + + A  +F +++  GI P  V+YNTLL  +  A +F E
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           A  + R M+ K  E + +TY++++   G +++HEK
Sbjct: 603 AARMMREMKDKGFEYDAITYSSILDAVG-NVDHEK 636



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 38/343 (11%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD   E  R   SP+V+ Y  +++ + +A + + A+G + +M + G+ PD    + L+  
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347

Query: 64  FGKEG------------------------------MFDSAI------SWLQQMEQDRVSG 87
            GK G                              +F+S        SW  +M+ D VS 
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
               YS LI+   K +   KA+ +   +   G  P   AY ++IN  GKAK ++ A  L 
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           +E++E      +  Y+ ++  + +  K  EA+ +F EM       D+   N ++    + 
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
            M  +A+ L   M + G    + S+N +L  +    +   AI +F  ++   I+ + VTY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           NT++  +  +   E+A  +M+EM+++G E +AITYS+I+   G
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 109/212 (51%), Gaps = 1/212 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK++E A+ LF E+++         Y+ +
Sbjct: 427 KALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G    A+    +M+      D+  Y+ L+    K    ++A S+  +++ +G 
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             D+ ++N ++N F +  + + A  + E ++  G+KPD V+Y+TLL  +     F EA  
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +  EM +     D  T + ++D  G +D  KD
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 50/102 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE      + ++N++L    R      A  +F+ ++  GI PD  TY+TL+ CF   GMF
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
           + A   +++M+      D + YS++++    +      +S F
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/560 (22%), Positives = 251/560 (44%), Gaps = 45/560 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+   N +L ++++A + ++++ +FD M   G+ PD Y +ST++  F   G  D AI  
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ME+  V+ ++V Y+N+I    K     +A     +++   + P LV Y  +IN   K
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F EA  +++EM ++G  P+ V Y+TL++ Y        AL +  +M       +  T
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV---------YGEAELF-- 245
           CN +I  Y + +  + A+ L   M   G    V++  T   V         +  A LF  
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGG---GVINQGTFTSVIHRLCLKCRFDSALLFIM 396

Query: 246 ---------------------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                                       EAI L+  +  K    N VT N +I    ++ 
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E+A  L++EM  RG+  ++I+Y+T+I    K GK++    L +++   G++ D   Y 
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
            ++     +G +  A  L HE ++    P      I+     +A R+EE   +F++    
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
              ++  V+G +I  +  N        + + MRS G    S   + +++    +   ++A
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
           + L  EM++EG   +   +  ++  Y      + ++S+ + +  ++    K  + ++   
Sbjct: 637 NQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMING 696

Query: 515 YERANRLNDASRIMNRMNKR 534
           + +   +  A++++N M ++
Sbjct: 697 HCKLGNMKAAAKLLNEMAQK 716



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 200/421 (47%), Gaps = 8/421 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+    N +++   ++ Q E A  L +EM   G   ++ T++++I     +  FDSA+ 
Sbjct: 334 SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALL 393

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           ++ +M       +  L + L+    +    S+AI ++ RL   G   + V  N +I+   
Sbjct: 394 FIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLC 453

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A   +EA  L++EM E+G+  D++SY+TL+    +  K  E   +  EM       D+ 
Sbjct: 454 EAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMY 513

Query: 196 TCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           T N+++  +G  +M K  +A  L+   +K G  P   +Y  ++  Y +A    E   LF+
Sbjct: 514 TYNMLL--HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M   +IEQN V Y T+I+ Y ++    +A  L  +M++RGI   + TYS++I      G
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            +D A  L  ++R  G+  + V Y  +I  Y ++G +     +L E+   N  P +   T
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 374 IL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           I+     + G ++ A  +  +    G V D   +  +   F +  K    ++V + M + 
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751

Query: 430 G 430
           G
Sbjct: 752 G 752



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  ++ +    N ++  +  A   E A  L  EM +RG+  D  +Y+TLI    KEG  +
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVE 494

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                 ++M +  +  D+  Y+ L+     +    +A  ++   K +G  PD   Y  MI
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + KA   +E   L +EM    ++ + V Y TL+  Y EN    EA  +  +M     P
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIP 614

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T + +I     + +   A++L   MRK G+ P+VV Y  L+  Y +     +   +
Sbjct: 615 QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSI 674

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M    +  N +TY  MI  + K    + A  L+ EM  +GI P+A+TY+ +   + K
Sbjct: 675 LQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCK 734

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            GK++ A  +   + + G+ +D + Y T+I  + +
Sbjct: 735 EGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 229/487 (47%), Gaps = 8/487 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  PS+  Y V++  +++ ++++ A+ +  EM  RG AP+   Y+TLI  + + G  
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A+     M  + +S + V  ++LI+   K +    A  +   + + G V +   + ++
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+       F  A L I EM  +  KP+    + L++   +N K  EA+ ++  + E   
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF 438

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +I    +    ++A +L   M + G+    +SYNTL+    +     E   
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M R+ I+ ++ TYN ++       + E+A  L  E +  G  P+A TY  +I  + 
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYC 558

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KA +++    LFQ++ +  +E + V+Y T+I AY   G +  A RL  ++R    IP+ +
Sbjct: 559 KANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS-RGIPQTS 617

Query: 371 A-----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           A     I  L+  G ++ A  +  +    G   ++  +  +I  + +  +   V  + ++
Sbjct: 618 ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQE 677

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M      P+     +++N + KL   + A  L +EM ++G +  D V +  L+  G  K+
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG-IVPDAVTYNALT-NGFCKE 735

Query: 486 FNMLESL 492
             M E+L
Sbjct: 736 GKMEEAL 742



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 127/262 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P ++ YN++L  +    + E A GL+ E ++ G  PD YTY  +I  + K    +     
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M   ++  + V+Y  LI    +  +  +A  +   ++S GI      Y+++I+    
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L   A  L++EMR++G+ P+ V Y+ L+  Y +  +  +  S+  EM+  N   +  T
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKIT 689

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             IMI+ + +L   K A +L   M + GI P  V+YN L   + +     EA+ +  LM 
Sbjct: 690 YTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMS 749

Query: 257 RKEIEQNVVTYNTMIKIYGKSL 278
              I  + +TY T+I  + K L
Sbjct: 750 TGGISLDDITYTTLIDGWHKPL 771



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 195/467 (41%), Gaps = 47/467 (10%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           +FS L + G+ P L   N +++   KA   K +  + + M   GV PD   +ST++N + 
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              +  +A+ +F +M +V    ++ T N +I    +     +A +    M K  + PS+V
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y  L+    + E F EA  + + M  +    N V YNT+I  Y +      A  +  +M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--------- 341
            + GI PN++T +++I  + K+ +++ A  L +++ + G  I+   + ++I         
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 342 ---------------------VAYERVGLVAHAK---------RLLHELRQPNTIPRETA 371
                                +     GL  + K         RLL +    NT+     
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L  AG  EEA  + ++  + G V D   +  +I    +  K     ++ E+M   G 
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            PD +   ++L+    + + E A  L+ E ++ G       +  M+  Y         E 
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568

Query: 492 LFERLDSDSNINKKELHHVVAGIYERA----NRLNDASRIMNRMNKR 534
           LF+ + +     K E + VV G   RA      + +A R+ + M  R
Sbjct: 569 LFQEMVT----MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 209/458 (45%), Gaps = 41/458 (8%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN V+  +++  Q E  H ++ EM   G   PD  TYS LI+ + K G  DS
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI    +M+ + +     +Y+ L+ +  K+    KA+ +F  +K +G  P +  Y  +I 
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    EA    ++M   G+ PD V  + L+N+  +  +  E  +VF+EM    C  
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC-- 369

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHL 251
                                             P+VVSYNT+++   E++    E    
Sbjct: 370 ---------------------------------TPTVVSYNTVIKALFESKAHVSEVSSW 396

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+   +  +  TY+ +I  Y K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A + + A  LF++L+ +   +   +Y  MI  + + G ++ A  L +E++   + P   A
Sbjct: 457 AKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516

Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               ++ + +AG I EA  + R+  + G   DI+    ++  F+R       IE+FE ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +G  PD      +L  +     FE A  +  EM+++G
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 21/503 (4%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSD 104
           ++R    D  TY TLI C  +  ++      +Q++ ++  VS    + S L++   +   
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYS 163
            SKA+S+F + K     P    YN++I +  +    ++   +  EM  +G   PDT++YS
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNC--PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
            L++ Y +  +   A+ +F EM + NC  P +      ++ +Y ++   + A  LF  M+
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKD-NCMQPTE-KIYTTLLGIYFKVGKVEKALDLFEEMK 295

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G  P+V +Y  L++  G+A    EA   ++ M R  +  +VV  N ++ I GK    E
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + TN+  EM      P  ++Y+T+I A++     +   +  F K+++  V      Y  +
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +   V  A  LL E+ +    P   A    I  L +A R E A  +F++  +   
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFG 475

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+ F +  K +  +++F +M++ G  PD +    +++   K      A+ 
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYG----ARKDFNMLESLFERLDSDSNINKKEL-HHVV 511
           L  +M+E GC      H  +L+ +      R+   M E++       S I    + ++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KHSGIKPDGVTYNTL 590

Query: 512 AGIYERANRLNDASRIMNRMNKR 534
            G +  A    +A+R+M  M  +
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDK 613



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 12/275 (4%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAH-----GLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           R +P+V +YN V++ +  +K    AH       FD+M+   ++P  +TYS LI  + K  
Sbjct: 368 RCTPTVVSYNTVIKALFESK----AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAY 127
             + A+  L++M++         Y +LI    K   Y  A  +F  LK + G V   V Y
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRV-Y 482

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MI  FGK     EA  L  EM+ QG  PD  +Y+ L++  V+     EA S+  +M E
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C  D+ + NI+++ + +  + + A  +F +++  GI P  V+YNTLL  +  A +F E
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           A  + R M+ K  E + +TY++++   G +++HEK
Sbjct: 603 AARMMREMKDKGFEYDAITYSSILDAVG-NVDHEK 636



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 38/343 (11%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD   E  R   SP+V+ Y  +++ + +A + + A+G + +M + G+ PD    + L+  
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347

Query: 64  FGKEG------------------------------MFDSAI------SWLQQMEQDRVSG 87
            GK G                              +F+S        SW  +M+ D VS 
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
               YS LI+   K +   KA+ +   +   G  P   AY ++IN  GKAK ++ A  L 
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELF 467

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           +E++E      +  Y+ ++  + +  K  EA+ +F EM       D+   N ++    + 
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
            M  +A+ L   M + G    + S+N +L  +    +   AI +F  ++   I+ + VTY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           NT++  +  +   E+A  +M+EM+++G E +AITYS+I+   G
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 1/212 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK++E A  LF E+++         Y+ +
Sbjct: 427 KALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FGK G    A+    +M+      D+  Y+ L+    K    ++A S+  +++ +G 
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             D+ ++N ++N F +  + + A  + E ++  G+KPD V+Y+TLL  +     F EA  
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +  EM +     D  T + ++D  G +D  KD
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 50/102 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE      + ++N++L    R      A  +F+ ++  GI PD  TY+TL+ CF   GMF
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
           + A   +++M+      D + YS++++    +      +S F
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 200/449 (44%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VL+ +  AK+W     L +EM + G  P+  T++TLI    + G+F+     
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L QM     + D+ +Y+ +++   K      A  I  R+ S G+ P++V YNT++     
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ +++A  L+ EM +     D V+++ L++ + +N      + +  +M E  C  D+ T
Sbjct: 343 AERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVIT 402

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  SM   G  P+ +SY  +L+    AE + +A  L   M 
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMI 462

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +    N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK D
Sbjct: 463 EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTD 522

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   + + G+                                PNTI   +  + L+
Sbjct: 523 EALELLNVMVNKGM-------------------------------SPNTIIYSSIASALS 551

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + GRI     +F    D     D  ++  +I    +       IE    M S+G  P+  
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNES 611

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
              +++         + A ++ +E+  +G
Sbjct: 612 TYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 162/345 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +  Y  VL  V +    E+AH + D M   G+ P+   Y+T++        ++ A  
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M  +    D V ++ L++   +     + I +  ++   G VPD++ Y T+IN F 
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  EA +L++ M   G +P+T+SY+ +L       ++V+A  + ++M E  C  +  
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L  +M
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 531

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  N + Y+++     K     +   +   +Q+  I  +A+ Y+ +I+   K G  
Sbjct: 532 VNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGT 591

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           DRA      + SSG   +   Y  +I      G V  A+ +L EL
Sbjct: 592 DRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 204/445 (45%), Gaps = 14/445 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM---FDSA 73
           P+ + Y  V+R +    +   A  + DEMR+RG AP    Y  ++      G    F SA
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 74  ISWLQQMEQDRVSGDLVLYSNLI--ELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTM 130
           +  LQ +     + D V   NL+   +  +     +A+ +   L +S G  PD+V+YN +
Sbjct: 173 VRVLQDLHGRGCALD-VGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +     AK +   + L+EEM   G  P+ V+++TL+     N  F     V A+M +  C
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+     ++D   +    + A  +   M   G+ P+VV YNT+L+    AE + +A  
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M   +   + VT+N ++  + ++    +   L+++M   G  P+ ITY+T+I  + 
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
           K G +D A ML + + + G   + + Y  ++           A+ L+ ++ +    PN +
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I  L + G +E+A  + +Q    G   D+  +  +I+   +  K    +E+   M
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 531

Query: 427 RSAGYFPDSHI---IALVLNSYGKL 448
            + G  P++ I   IA  L+  G++
Sbjct: 532 VNKGMSPNTIIYSSIASALSKEGRI 556



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 146/349 (41%), Gaps = 12/349 (3%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           YN M++ + +A     AR L   +    V P+  +Y  ++       +  +ALSV  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMA---KDADRLFWSMRKMGIDPSVVSYNTLLR-VYGEA 242
              C       +++++           + A R+   +   G    V + N +L  V  + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 243 ELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
               EA+ L R L      + +VV+YN ++K    +    +  +LM+EM   G  PN +T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T+I    + G  +R   +  ++   G   D  +Y T++    + G +  A  +L  + 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +PN +   T +  L  A R E+A  +  + FD     D   F  +++ F +N    
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            VIE+ E+M   G  PD      V+N + K    + A  L   M   GC
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 68/139 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP + +Y+ V+  + +A + + A  L + M  +G++P+   YS++ +   KEG  +  I 
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               ++   +  D VLY+ +I    K     +AI   + + SSG +P+   Y  +I    
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLA 621

Query: 136 KAKLFKEARLLIEEMREQG 154
                KEA+ ++ E+  +G
Sbjct: 622 SEGFVKEAQEMLTELCSKG 640


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 203/432 (46%), Gaps = 4/432 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G   +AI
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ M Q     +++ Y+ +I+   K    ++A++IFS + + GI P++  YN++I+  
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   +K    L+ EM +  + P+ V ++TL++   +      A  V   M +     D+
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDV 319

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   ++D +       +AD++F +M + G  P+V+SY+TL+  Y + +   +A++LF  
Sbjct: 320 VTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEE 379

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M ++E+  N+VTYNT+I           A  L  EM   G  P+ +TY  ++    K   
Sbjct: 380 MCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRH 439

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           LD+A  + + +  S +  D   Y  +I    RVG +  A  L   L      P     TI
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499

Query: 375 ----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
               L   G + EAT +FR+    G   D   +  +   F RN +  + I++ ++M   G
Sbjct: 500 MINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559

Query: 431 YFPDSHIIALVL 442
           +  D+  I L++
Sbjct: 560 FSADASTITLIV 571



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 203/458 (44%), Gaps = 4/458 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  +  +L ++   K +     L  +M   GI  D YT + +I  F      D   S 
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P+ V Y T+I+   K
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               + A  L+  M ++  +P+ ++Y+T+++   ++ +  EAL++F+EM       +++T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I    +    K    L   M    I P+VV + TL+    +  +   A  +  +M 
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E +VVTY  ++  +    E ++A  +   M  +G  PN I+YST+I  + K  ++D
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
           +A  LF+++    +  + V Y T+I     VG +  A  L HE+     IP      I  
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +++A  + +    +    DI  +  +I+   R  +     ++F  + S G  
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
           PD     +++N          A  L+ EM  +GC   D
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/503 (21%), Positives = 222/503 (44%), Gaps = 16/503 (3%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ ++T       + + +S  +QM+   +  D+   + +I     
Sbjct: 62  FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+      S+ +++   G  PD   + T+I          EA  L ++M  +G +P+ V+
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL++   +      A+ +   M + NC  ++ T N +ID   +     +A  +F  M 
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI 241

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR---KEIEQNVVTYNTMIKIYGKSL 278
             GI P+V +YN++  ++G  + F E  H+  LM      +I  NVV + T++    K  
Sbjct: 242 AKGISPNVSTYNSI--IHGLCK-FSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG 298

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
               A +++  M  RG+EP+ +TY+ ++       ++D A  +F  +   G   + + Y 
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS 358

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           T+I  Y ++  +  A  L  E+ Q    PN +   T I  L   GR+ +A  +F +   +
Sbjct: 359 TLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVAS 418

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G++ D+  +  +++   + +     + + + +  +   PD     +V++   ++ E E A
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478

Query: 455 DDLYSEMQEEGC---VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
            DL+S +  +G    V++  +    L L G   +      LF  +++D        ++++
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT---KLFREMNTDGCSPDDCTYNLI 535

Query: 512 AGIYERANRLNDASRIMNRMNKR 534
              + R N    A +++  M  R
Sbjct: 536 TRGFLRNNETLSAIQLLQEMLGR 558



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 12/353 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  YN ++  + +  +W+    L +EM    I P+   ++TL+    KEGM   A  
Sbjct: 246 SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHD 305

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M Q  V  D+V Y+ L++     S+  +A  +F  +   G  P++++Y+T+IN + 
Sbjct: 306 VVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYC 365

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L EEM ++ + P+ V+Y+TL++      +  +A+++F EM       DL 
Sbjct: 366 KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLV 425

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL----RVYGEAELFGEAIHL 251
           T  I++D   +      A  +  ++    + P + SYN ++    RV GE E  G+   L
Sbjct: 426 TYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV-GELEAAGD---L 481

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           F  +  K +  +V TY  MI   G  L+    +AT L +EM   G  P+  TY+ I   +
Sbjct: 482 FSSLSSKGLHPDVWTYTIMIN--GLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGF 539

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            +  +   A  L Q++   G   D      ++      GL    K++LHE  Q
Sbjct: 540 LRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 1/307 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +++  P+V  +  ++  + +     +AH + D M QRG+ PD  TY+ L+         D
Sbjct: 277 DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      M +   + +++ YS LI    K+    KA+ +F  +    +VP++V YNT+I
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI 396

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        ++A  L  EM   G  PD V+Y  LL+   +     +A+++   +   N  
Sbjct: 397 HGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLA 456

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ + NI+ID   ++   + A  LF S+   G+ P V +Y  ++       L  EA  L
Sbjct: 457 PDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M       +  TYN + + + ++ E   A  L+QEM  RG   +A T + I+ +   
Sbjct: 517 FREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSD 576

Query: 312 AGKLDRA 318
            G LD++
Sbjct: 577 DG-LDQS 582



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 1/149 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L  I E +  +P + +YN+V+  + R  + E A  LF  +  +G+ PD +TY+ +
Sbjct: 442 QAMAMLKAI-EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIM 500

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I     +G+   A    ++M  D  S D   Y+ +     + ++   AI +   +   G 
Sbjct: 501 INGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             D      ++ +     L +  + ++ E
Sbjct: 561 SADASTITLIVEMLSDDGLDQSVKQILHE 589


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 211/457 (46%), Gaps = 4/457 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  PS+  ++ +L ++ R K +     L+ +M   GI  + YT + LI  F        A
Sbjct: 49  RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFA 108

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S L  + +         ++ LI          +A+ +F ++   G  PD++ Y T+IN 
Sbjct: 109 FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 168

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K      A   +  M ++  +P  V YST+++   ++ +  EALS+F++M       +
Sbjct: 169 LCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPN 228

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T + +I     L   K+A RLF++M    I P  +++NTL+    +  +  +A ++  
Sbjct: 229 NFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVD 288

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M + +++ +VVTYN+++  +    E  K  N+   M  +G  P+ I+Y+T+I  + K  
Sbjct: 289 VMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQ 348

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
            +D+A  LF+++   G+  D V Y T+I     VG +  A  L HE+    + P+ +   
Sbjct: 349 IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 408

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                L +  R+ EA  + +         DI ++  +++   R  +     ++F K+ S 
Sbjct: 409 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSK 468

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           G  PD     +++N   +      A  L+ EM E GC
Sbjct: 469 GLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 209/433 (48%), Gaps = 6/433 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   +  ++R +    +   A  LFD+M   G  PD  TY TLI    K G   +AI
Sbjct: 120 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAI 179

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L+ MEQ      +V+YS +I+   K    ++A+S+FS + + GI P+   Y+++I+  
Sbjct: 180 RFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 239

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +KEA  L   M  + + PD ++++TL++   +    V+A  V   M + +   D+
Sbjct: 240 CILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDV 299

Query: 195 TTCNIMIDVYG-QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            T N ++D +  + +M K  + +F +M + G  PSV+SY TL+  Y + ++  +A+ LF 
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVN-VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFE 358

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M ++ +  + VTYNT+I           A  L  EM   G  P+ +TY  +     K  
Sbjct: 359 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 418

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +L  A +L + +  + ++ D  +Y  ++    R G +  A+ L  +L      P     T
Sbjct: 419 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 478

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           I    L + G + EA+ +F +  + G   +   +  +   F RN +    I++F++M S 
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538

Query: 430 GYFPDSHIIALVL 442
           G+  D     L++
Sbjct: 539 GFSIDVSTTTLLV 551



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 207/455 (45%), Gaps = 10/455 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + +  N+++ +     +   A  +  ++ + G  P   T++TLI     EG    A+   
Sbjct: 88  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M  +    D++ Y  LI    K+ + S AI     ++     P +V Y+T+I+   K 
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   EA  L  +M  +G+ P+  +YS+L++ L +  H + EA+ +F  M       D  T
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH-WKEAIRLFYAMIHRKIMPDQLT 266

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +  M   A  +   M +  + P VV+YN+L+  +      G+ +++F  M 
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK    +V++Y T+I  Y K    +KA  L +EM  +G+ P+ +TY+T+I      G+L 
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
            A  LF ++   G   D V Y+ +     +   +A A  LL  +   N  P     +I  
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + RAG +E A  +F +    G   D+  +  MI    +    A   ++F +M   G  
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCS 506

Query: 433 PDSHIIALVLNSYGKLREFET--ADDLYSEMQEEG 465
           P++    L+  + G LR  ET  A  L+ EM   G
Sbjct: 507 PNACTYNLI--TRGFLRNNETLRAIQLFQEMLSRG 539



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 168/347 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ F Y+ ++  +     W+ A  LF  M  R I PD+ T++TL+    KEGM   A  
Sbjct: 226 SPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHY 285

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M Q  +  D+V Y++L++     S+  K +++F  +   G VP +++Y T+IN + 
Sbjct: 286 VVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYC 345

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K ++  +A  L EEM +QG+ PDTV+Y+TL++      +  +A+++F EM       DL 
Sbjct: 346 KIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 405

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I+ D   +     +A  L   +    +DP +  Y+ ++     A     A  LF  +
Sbjct: 406 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 465

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  +V TY  MI    +     +A+ L  EM   G  PNA TY+ I   + +  + 
Sbjct: 466 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            RA  LFQ++ S G  ID      ++      GL    K++L E  Q
Sbjct: 526 LRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 193/432 (44%), Gaps = 4/432 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LF+ M +    P    +S L+T   +   + + +S  +QM+   +  +    + LI 
Sbjct: 38  ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
               L+    A S+   +   G  P    + T+I          EA  L ++M  +G +P
Sbjct: 98  SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D ++Y TL+N   +      A+     M + NC   +   + +ID   +     +A  LF
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLF 217

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   GI P+  +Y++L+        + EAI LF  M  ++I  + +T+NT++    K 
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 277

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
               KA  ++  M    ++P+ +TY++++       ++ +   +F  +   G     + Y
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISY 337

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I  Y ++ ++  A  L  E+ Q    P+T+   T I  L   GR+ +A  +F +   
Sbjct: 338 TTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 397

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G++ D+  +  + +   +N + A  + + + +      PD HI ++V++   +  E E 
Sbjct: 398 YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEA 457

Query: 454 ADDLYSEMQEEG 465
           A DL+S++  +G
Sbjct: 458 ARDLFSKLSSKG 469



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 5/340 (1%)

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L   M      P  V +S LL        +   LS++ +M+    P +  T NI+I
Sbjct: 37  DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +  L+    A  +   + K+G  PS  ++ TL+R        GEA+ LF  M  +  +
Sbjct: 97  NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V+TY T+I    K      A   ++ M+ R   P  + YSTII    K  +L  A  L
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL 216

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILAR 377
           F  + + G+  +   Y ++I     +G    A RL    +H    P+ +   T +  L +
Sbjct: 217 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 276

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G + +A +V      +    D+  +  +++      +    + VF+ M   G  P    
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              ++N Y K++  + A  L+ EM ++G +  D V +  L
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQG-LIPDTVTYNTL 375



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 65/139 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P +  Y++V+  + RA + E A  LF ++  +G+ PD  TY+ +I    ++G+ 
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M+++  S +   Y+ +     + ++  +AI +F  + S G   D+     +
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550

Query: 131 INVFGKAKLFKEARLLIEE 149
           + +     L +  + ++ E
Sbjct: 551 VEMLSDDGLDQSVKQILCE 569


>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Vitis vinifera]
          Length = 723

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 1/365 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++    +WI  +  +      YNV ++++   +Q++L   L +EM   G+  D  TYST+
Sbjct: 181 KTYLFFNWIKTQNLFPMETIFYNVTMKSLRFGRQFQLIEELANEMISTGVELDNITYSTI 240

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ITC  +  +FD A+ W ++M +  +  D V YS ++++  KL    + +S++ R ++SG 
Sbjct: 241 ITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGW 300

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD +A+  +  +FG+A  +   R +++EM+  GV+P+ V Y+TLL    +  K   A S
Sbjct: 301 KPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARS 360

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM       D  T   ++ +YG+   A+DA  L+  MR  G     + YNTLL +  
Sbjct: 361 LFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCA 420

Query: 241 EAELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           +  L  EA  LF  M++ E    +  +Y  M+ IYG     ++A  L  EM   G++ N 
Sbjct: 421 DLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINV 480

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +  + +    G+A ++D    +F+     GV+ D  L   ++           A ++L  
Sbjct: 481 MGCTCLSQCLGRARRIDDLVKVFEVSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLAC 540

Query: 360 LRQPN 364
           L+Q N
Sbjct: 541 LQQAN 545



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N + L   L  + K    F+ +K+  + P + + YN  +      + F+    L  EM  
Sbjct: 168 NALLLLNSLKPWPKTYLFFNWIKTQNLFPMETIFYNVTMKSLRFGRQFQLIEELANEMIS 227

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            GV+ D ++YST++      + F +A+  F  M +     D  T + ++DVY +L   ++
Sbjct: 228 TGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEE 287

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              L+   R  G  P  +++  L +++GEA  +    ++ + M+   ++ N+V YNT+++
Sbjct: 288 VLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLE 347

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             GK+ +   A +L +EM   G+ P+A T + ++ I+GKA     A  L++++RS+G  +
Sbjct: 348 AMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPM 407

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D +LY T++     +GL   A++L  ++++     P++      + I    G ++ A  +
Sbjct: 408 DFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQL 467

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +  + G   ++    C+ +   R ++  ++++VFE     G  PD  +   +L+    
Sbjct: 468 FDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEVSLERGVKPDDRLCGCLLSVVSF 527

Query: 448 LREFETADDLYSEMQE 463
               E A+ + + +Q+
Sbjct: 528 CEGAEDANKVLACLQQ 543



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 124/242 (51%), Gaps = 5/242 (2%)

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +E + +TY+T+I    +    +KA    + M   G+ P+ +TYS I+ ++ K GK++   
Sbjct: 230 VELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVL 289

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
            L+++ R+SG + DP+ +  +   +   G     + +L E++    QPN +   T +  +
Sbjct: 290 SLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAM 349

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +AG+   A  +F +   +G + D      +++++ + +   + +E++E+MRS G+  D 
Sbjct: 350 GKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDF 409

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
            +   +L+    L   E A+ L+ +M++ E C      +  ML++YG+  + +    LF+
Sbjct: 410 ILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFD 469

Query: 495 RL 496
            +
Sbjct: 470 EM 471



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 120/251 (47%), Gaps = 5/251 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G++   ++Y+T++       LF +A+  F  M +  +  + VTY+ ++ +Y K  +
Sbjct: 225 MISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGK 284

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            E+  +L +  +  G +P+ I ++ +  ++G+AG  D    + Q+++S GV+ + V+Y T
Sbjct: 285 VEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNT 344

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++ A  + G    A+ L  E+     IP    +T L     +A    +A  ++ +    G
Sbjct: 345 LLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNG 404

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETA 454
              D  ++  ++ + +         ++FE M+ + +  PDS     +LN YG     + A
Sbjct: 405 WPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRA 464

Query: 455 DDLYSEMQEEG 465
             L+ EM E G
Sbjct: 465 MQLFDEMSELG 475



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 6/184 (3%)

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILA 376
           L  ++ S+GVE+D + Y T+I   +R  L   A +    + +   +P E      + + A
Sbjct: 221 LANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYA 280

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G++EE   ++ +   +G   D   F  + ++F     Y  +  V ++M+S G  P+  
Sbjct: 281 KLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLV 340

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG-ARKDFNMLESLFER 495
           +   +L + GK  +   A  L+ EM   G +   +    ++ +YG AR   + LE L+ER
Sbjct: 341 VYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALE-LWER 399

Query: 496 LDSD 499
           + S+
Sbjct: 400 MRSN 403



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 75/168 (44%)

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T IT   R    ++A   F + +  G + D   +  +++++++  K   V+ ++
Sbjct: 233 DNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLY 292

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+ R++G+ PD    A++   +G+  +++    +  EM+  G   +  V+  +L   G  
Sbjct: 293 ERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKA 352

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +  SLFE +     I   +    +  IY +A    DA  +  RM
Sbjct: 353 GKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERM 400


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 212/458 (46%), Gaps = 32/458 (6%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y ++L  + R  + E A  +  ++ + G+ P + +Y+ L+  + +EG    AI   +QM
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+  +  + + ++ +I    +  +   A +   R+   G+ P +  YN++IN +G+   F
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
                 ++EM + G+KP+ +SY +L+N   ++ K ++A  V A+M       +    N++
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I+    L   KDA R F  M + GID ++V+YNTL+   G      +A  LF  M  K  
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +V+TYN++I  Y KS+  +K   L  +M+  GI+P   T+  +I    K G +    M
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM 626

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
            FQ++    +  D  +Y  MI +Y                               A  G 
Sbjct: 627 -FQEMLQMDLVPDQFVYNEMIYSY-------------------------------AEDGN 654

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           + +A  + +Q  D G   D   +  +I  + R+++ + +  + + M++ G  P      +
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           ++     L++F  A   Y EM E G + +  + +Q++S
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLIS 752



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 242/529 (45%), Gaps = 24/529 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            PSVFAYN+VL  + + ++ + A  LFDEM QR + P+  TY+TLI  + K G  + A+ 
Sbjct: 189 GPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALG 248

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD---LVAYNTMIN 132
           + ++M++  V  +LV Y++L+           A  +   ++ SG +P       ++   N
Sbjct: 249 FKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSN 308

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             G   LF    + I+E           +Y  LLN      +  +A  V A++ E     
Sbjct: 309 GAGDDGLFDGKEIRIDER----------TYCILLNGLCRVGRIEKAEEVLAKLVENGVTP 358

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              + NI+++ Y Q    K A      M + G++P+ +++NT++  + E      A    
Sbjct: 359 SKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWV 418

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M  K +   V TYN++I  YG+     +    + EM   GI+PN I+Y ++I    K 
Sbjct: 419 RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKD 478

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IPR 368
            KL  A ++   +   GV  +  +Y  +I A   +  +  A R   E+ Q       +  
Sbjct: 479 RKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTY 538

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I  L R GR+++A  +F Q    G   D+  +  +I  ++++      +E+++KM+ 
Sbjct: 539 NTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKI 598

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            G  P       ++ +  K     T D ++ EM +   V    V+ +M  +Y   +D N+
Sbjct: 599 LGIKPTVGTFHPLIYACRK-EGVVTMDKMFQEMLQMDLVPDQFVYNEM--IYSYAEDGNV 655

Query: 489 LESLF---ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           ++++    + +D   + +K   + ++   Y R  R+++   +++ M  +
Sbjct: 656 MKAMSLHQQMVDQGVDCDKVTYNSLILA-YLRDRRVSEIKHLVDDMKAK 703



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/471 (22%), Positives = 194/471 (41%), Gaps = 40/471 (8%)

Query: 32  AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
           +K  + A  L+  MR+ G  P   + + L+        F+  ++    +       D V 
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y   ++ A  L D  K   +   +   G+ P + AYN ++    K +  K+AR L +EM 
Sbjct: 160 YGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMI 219

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++ + P+TV+Y+TL++ Y +     EAL     M E N   +L T N +++         
Sbjct: 220 QRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVD 279

Query: 212 DADRLFWSMRKMGIDPS--------------------------------VVSYNTLLRVY 239
           DA  +   M   G  P                                  +  N L RV 
Sbjct: 280 DAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV- 338

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G  E   +A  +   +    +  + ++YN ++  Y +  + +KA    ++M+ RG+EPN 
Sbjct: 339 GRIE---KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           IT++T+I+ + + G++D A    +++   GV      Y ++I  Y + G        L E
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +     +PN I   + I  L +  ++ +A  V       G   +  ++  +IE      K
Sbjct: 456 MDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSK 515

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             +    F++M  +G          ++N  G+    + A+DL+ +M  +GC
Sbjct: 516 LKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 167/369 (45%), Gaps = 38/369 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+   +N V+       + + A      M ++G++P   TY++LI  +G++G F
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                +L +M++                                   +GI P++++Y ++
Sbjct: 447 VRCFEFLDEMDK-----------------------------------AGIKPNVISYGSL 471

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   K +   +A +++ +M  +GV P+   Y+ L+       K  +A   F EM +   
Sbjct: 472 INCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L T N +I+  G+    K A+ LF  M   G +P V++YN+L+  Y ++    + + 
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM-QEMQNRGIEPNAITYSTIIAIW 309
           L+  M+   I+  V T++ +  IY    E     + M QEM    + P+   Y+ +I  +
Sbjct: 592 LYDKMKILGIKPTVGTFHPL--IYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSY 649

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G + +A  L Q++   GV+ D V Y ++I+AY R   V+  K L+ +++    +P+ 
Sbjct: 650 AEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKV 709

Query: 370 TAITILARA 378
               IL + 
Sbjct: 710 DTYNILIKG 718



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/453 (21%), Positives = 186/453 (41%), Gaps = 44/453 (9%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R R I   R+  S L+T         +A S L ++    VS       NL+ L       
Sbjct: 54  RGRTITARRFLRSLLLT--------KTAFSSLSELHA-HVSKPF-FSDNLLWLCSVSKML 103

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
            +A  ++S ++  G VP   + N ++     ++ F++   +  ++ + G +PD V+Y   
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +   V      +   +   M +      +   N+++    ++   KDA +LF  M +  +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+ V+YNTL+  Y +     EA+     M+ + +E N+VTYN+++     S   + A  
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283

Query: 286 LMQEMQNRGIEPNAI----------------------------TYSTIIAIWGKAGKLDR 317
           ++ EM+  G  P                               TY  ++    + G++++
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  +  KL  +GV    + Y  ++ AY + G V  A     ++     +PN I   T I+
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403

Query: 374 ILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                G ++ A TWV R+  + G    +  +  +I  + +   +    E  ++M  AG  
Sbjct: 404 KFCETGEVDHAETWV-RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIK 462

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+      ++N   K R+   A+ + ++M   G
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRG 495


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    +  +++ +    Q   A    D++  +GI  D+ +Y TLI    K G    AI
Sbjct: 125 YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +++++      ++ +Y+ +I+   K    S+A  +FS + + GI  D+V Y T+I  F
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             A   KEA  L+ EM  + + P+  +Y+ L++   +  K  EA +V A M +     D+
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  +   K A  +F +M  MG+ P V SY  L+  + + ++  EA++LF+ 
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKE 364

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +K +   +VTY+++I    KS       +L+ EM++RGI  N ITY+++I    K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           LDRA  LF K++  G+                               +P +      +  
Sbjct: 425 LDRAIALFNKMKDQGI-------------------------------RPCSFTFTILLDG 453

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+++A   F+     G   D+  +  MI    +       + +  KM   G  P+
Sbjct: 454 LCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPN 513

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    +++N+  K  E + A+ L  +M   G
Sbjct: 514 AVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 212/458 (46%), Gaps = 4/458 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R++P +  +N +L +  + K +  A  L   +  +GI PD  T + LI CF   G     
Sbjct: 54  RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S L ++ +       + ++ LI+        +KA+    +L + GI  D V+Y T+IN 
Sbjct: 114 FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLING 173

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    + A  L+ ++  +  KP+   Y+T+++   +     EA  +F+EM       D
Sbjct: 174 VCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISAD 233

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   +I  +      K+A  L   M    I+P+V +YN L+    +     EA ++  
Sbjct: 234 VVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLA 293

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M +  ++ +V+TY+T++  Y    E +KA ++   M   G+ P+  +Y+ +I  + K  
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNK 353

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
            +D A  LF+++    +    V Y ++I    + G +++   L+ E+R      N I   
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYN 413

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + G ++ A  +F +  D G       F  +++   +  +  +  E F+ + + 
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTK 473

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           GY  D +   +++N + K    E A  + S+M+E GCV
Sbjct: 474 GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCV 511



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 191/434 (44%), Gaps = 39/434 (8%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+S   +M   R +  ++ ++ +++   K+  YS A+S+  RL+  GI PDL+  N +
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 131 INVFGK-----------AKLFK------------------------EARLLIEEMREQGV 155
           IN F             AK+ K                        +A    +++  QG+
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           K D VSY TL+N   +      A+ +  +++      ++   N +ID   +  +  +A  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  M   GI   VV+Y TL+  +  A    EAI L   M  K I  NV TYN ++    
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  + ++A N++  M    ++P+ ITYST++  +    +L +A  +F  +   GV  D  
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQA 391
            Y  +I  + +  +V  A  L  E+ Q N +P      + I  L ++GRI     +  + 
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            D G   ++  +  +I+   +N      I +F KM+  G  P S    ++L+   K    
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 452 ETADDLYSEMQEEG 465
           + A + + ++  +G
Sbjct: 461 KDAQEAFQDLLTKG 474



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 152/315 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  V  Y  ++     A + + A GL +EM  + I P+ YTY+ L+    KEG    A +
Sbjct: 231 SADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKN 290

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M +  V  D++ YS L++    + +  KA  +F+ +   G+ PD+ +Y  +IN F 
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFC 350

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  EA  L +EM ++ + P  V+YS+L++   ++ +      +  EM +   P ++ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVI 410

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID   +      A  LF  M+  GI P   ++  LL    +     +A   F+ +
Sbjct: 411 TYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    +V  YN MI  + K    E+A  ++ +M+  G  PNA+T+  II    K  + 
Sbjct: 471 LTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEN 530

Query: 316 DRAAMLFQKLRSSGV 330
           D+A  L +++   G+
Sbjct: 531 DKAEKLLRQMICRGL 545



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/420 (21%), Positives = 182/420 (43%), Gaps = 42/420 (10%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+S F+R+      P ++ +N +++ F K K +  A  L   +  +G++PD ++ + L+N
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 168 LYVENHKFVEALSVFAEM----------------------NEVNCPL------------- 192
            +    +     SV A++                       +VN  L             
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF 162

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  +   +I+   ++   + A +L   +      P+V  YNT++    + +L  EA  LF
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K I  +VVTY T+I  +  + + ++A  L+ EM  + I PN  TY+ ++    K 
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK+  A  +   +  + V+ D + Y T++  Y  V  +  A+ + + +      P   + 
Sbjct: 283 GKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSY 342

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           TIL     +   ++EA  +F++      V  I  +  +I+   ++ + + V ++ ++MR 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKD 485
            G   +      +++   K    + A  L+++M+++G   C F+  +    L   G  KD
Sbjct: 403 RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKD 462



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 35/284 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P V  Y+ ++       + + A  +F+ M   G+ PD ++Y+ LI  F K  M D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++  ++M Q  +   +V YS+LI+   K    S    +   ++  GI  +++ YN++I
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L  +M++QG++P + +++ LL+   +  +  +A   F         
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQ-------- 468

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            DL T    +DVY                           YN ++  + +  L  EA+ +
Sbjct: 469 -DLLTKGYHLDVY--------------------------KYNVMINGHCKQGLLEEALTM 501

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
              M+      N VT++ +I    K  E++KA  L+++M  RG+
Sbjct: 502 LSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 24/121 (19%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+ + + ++    P  F + ++L  + +  + + A   F ++  +G   D Y Y+ +
Sbjct: 427 RAIALFNKMKDQG-IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G+ + A++ L +ME++    + V +  +I    K  +  KA  +  ++   G+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545

Query: 121 V 121
           +
Sbjct: 546 L 546


>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
 gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
          Length = 731

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 261/593 (44%), Gaps = 61/593 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +  W   +  Y  +VF YN++LR + RA +WEL    + EM    + P  +TYS L
Sbjct: 99  KAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYSIL 158

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +   G+ GM D AI + + M +  V  D V+ S  + L R+  D  +A   F  L S  +
Sbjct: 159 VDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENL 218

Query: 121 VPDLV-------AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           V            YNTMI+ +G+   F E   +  EM + GV+  TV+++ ++++Y +  
Sbjct: 219 VDGTTKRPENPETYNTMISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKAG 278

Query: 174 KFVEALSVFAEMNE-VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
           +  EA  +   M +  +C  D+ T N +I++Y + D  +        MR  G+    V++
Sbjct: 279 RTREAELLVTNMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTF 338

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
            TL+  Y    +  +A  L + M+      +   Y  MI +Y ++ +  KA ++ + + +
Sbjct: 339 RTLISAYAANNVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHS 398

Query: 293 R-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
           R G+E +  TY  ++ ++ +   LD+A  +F+  +++G++  P LY  M+ AY       
Sbjct: 399 RGGLEVS--TYVGVMDVYAEHKCLDQAREVFELAKNAGLKT-PSLYNVMMKAYGACDRFT 455

Query: 352 HAKRLLHELRQPNTIPRETA-------------------ITILARA-------------- 378
            A  +   + +    P E +                   + +L +A              
Sbjct: 456 DAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVV 515

Query: 379 ------GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 GR+ EA  VF++   +G   D+  +  ++  ++         +  + +++AG+ 
Sbjct: 516 SFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFV 575

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLSLYGARKDFNMLES 491
           PD+ +   ++  Y  L     A+ +Y E+      VF+      ML+LY     F   E 
Sbjct: 576 PDTIVYTSMMKLYSNLGLIAEAEKIYEEISRLSPDVFAANT---MLNLYIKSGMFTEAEQ 632

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLN---DASRIMNR---MNKRRTFN 538
           LF  +        +    ++  +Y  A ++    D +R+M+R   +   R FN
Sbjct: 633 LFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFN 685



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/483 (22%), Positives = 212/483 (43%), Gaps = 56/483 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++   ++  + EL  G  + MR  G++ D+ T+ TLI+ +    +   A + 
Sbjct: 298 PDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYAANNVVWKAEAL 357

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +Q+ME      D  +Y+ +I +  +  D  KA S+F  L S G + ++  Y  +++V+ +
Sbjct: 358 VQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHSRGGL-EVSTYVGVMDVYAE 416

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   +AR + E  +  G+K  +        LY                           
Sbjct: 417 HKCLDQAREVFELAKNAGLKTPS--------LY--------------------------- 441

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N+M+  YG  D   DA  +F +M K G  P+  S+N+L+++  +  L      +  L++
Sbjct: 442 -NVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVK 500

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               + ++ + ++++  YG      +A  + +EM   G+E + I YS ++  + +AG   
Sbjct: 501 AAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAR 560

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--PNTIPRETAITI 374
            A      L+++G   D ++Y +M+  Y  +GL+A A+++  E+ +  P+     T + +
Sbjct: 561 EAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEISRLSPDVFAANTMLNL 620

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGC--MIELFSRNKKYANVIEVFEKMRSAGYF 432
             ++G   EA  +FR A   G+   ++   C  M++L+    K    ++V   M      
Sbjct: 621 YIKSGMFTEAEQLFR-AMQRGK-PGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLI 678

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            D+    +V+  Y K      A +   EM+  G V S             R  F+  E +
Sbjct: 679 TDARAFNVVIAMYVKAGLMREALEALKEMRRAGLVPS-------------RSTFSCFEEI 725

Query: 493 FER 495
            ER
Sbjct: 726 LER 728



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 10/297 (3%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL- 115
           Y+ ++  +G    F  A++  + ME+D  S +   +++LI+L  K     + + I  R+ 
Sbjct: 441 YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCK----GRLLEILQRVL 496

Query: 116 ---KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
              K++G  P L + +++++ +G     +EA  + +EM   GV+ D + YS LLN Y E 
Sbjct: 497 VLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEA 556

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
               EA      +       D      M+ +Y  L +  +A++++  + +  + P V + 
Sbjct: 557 GFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEISR--LSPDVFAA 614

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NT+L +Y ++ +F EA  LFR MQR +   N V    M+K+Y ++ + E+  ++ + M  
Sbjct: 615 NTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSR 674

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           R +  +A  ++ +IA++ KAG +  A    +++R +G+      +       ER G+
Sbjct: 675 RFLITDARAFNVVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 16/311 (5%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           Q D  K  +   W  R+   + +V  YN LLR  G A  +      +  M  + +   + 
Sbjct: 94  QRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIF 153

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+ ++ ++G++   ++A    + M   G+EP+ +  ST + +  + G L+ A   F  L
Sbjct: 154 TYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGL 213

Query: 326 RSSGV-------EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----TIPRETAITI 374
            S  +         +P  Y TMI  Y      A   ++  E+ +      T+     I +
Sbjct: 214 FSENLVDGTTKRPENPETYNTMISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHV 273

Query: 375 LARAGRIEEATWV---FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             +AGR  EA  +    +Q  D     D++ +  +IE++ +N K   V    E+MR +G 
Sbjct: 274 YGKAGRTREAELLVTNMKQRKDC--CPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGV 331

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
             D      ++++Y        A+ L  EM+  G +    ++  M+++Y   +D    ES
Sbjct: 332 SADQVTFRTLISAYAANNVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAES 391

Query: 492 LFERLDSDSNI 502
           +F  L S   +
Sbjct: 392 VFRFLHSRGGL 402


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 199/449 (44%), Gaps = 31/449 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN VLR +  A++W     L +EM   G  P+  T+STLI    + G+F+     
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV 274

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     
Sbjct: 275 HAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCS 334

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  ++EA  L+ EM ++    D V+++ L++   +N      + V  +M E  C  D+ T
Sbjct: 335 ADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+ + +  +  +A  L  SM   G  P+ VSY  +L+    AE + +A  L   M 
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAG  D
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   +   G+                                PNTI   +  + L+
Sbjct: 515 EALELLNVMVKKGM-------------------------------SPNTIIYSSIASALS 543

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             GRI +   +F    D     D  ++  +I    +  +    IE    M S+G  P+  
Sbjct: 544 GEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNES 603

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
              +++         + A ++ +E+  +G
Sbjct: 604 TYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 167/349 (47%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V  Y  ++  V + ++ E+A G+ + M   G++P+   Y+TL+        ++
Sbjct: 280 EHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWE 339

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M       D V ++ L++   +     + I +  ++   G +PD++ Y T+I
Sbjct: 340 EAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVI 399

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F K  L  EA +L+  M   G +P+TVSY+ +L       ++V+A  + ++M +  CP
Sbjct: 400 NGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCP 459

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L
Sbjct: 460 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALEL 519

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M +K +  N + Y+++           K   + + +Q+  +  +A+ Y+ +I+   K
Sbjct: 520 LNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCK 579

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            G+ DRA      + SSG   +   Y  +I      G V  A+ +L EL
Sbjct: 580 RGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 204/453 (45%), Gaps = 12/453 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+ + Y  ++R +    +   A  + D+M +RG AP    Y   +    +   F  A+ 
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVF 134
            L+ +     + D+   + +++         +A+ +   L  S G  PD+V+YN ++   
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             A+ +   + L+EEM   G  P+ V++STL+     N  F     V A+M E  C  D+
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                +ID   + +  + A  +   M   G+ P+VV YNTLL+    A+ + EA  L   
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K+   + VT+N ++    ++   ++   ++++M   G  P+ ITY+T+I  + K G 
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           +D A ML + + + G   + V Y  ++           A+ L+ ++ Q    PN +   T
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + G +E+A  + +Q    G   D+  +  +I+   +       +E+   M   G
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 431 YFPDSHI---IALVLNSYGKLRE----FETADD 456
             P++ I   IA  L+  G++ +    FE   D
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 46/358 (12%)

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S  + P+   Y  ++          +A  ++++M  +G  P    Y   L        F 
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
            A+ V  +++   C LD+  CN+++      G +D                         
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD------------------------- 198

Query: 234 TLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
                        EA+ L R L+     E +VV+YN +++    +       +LM+EM  
Sbjct: 199 -------------EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA 245

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
            G  PN +T+ST+I    + G  +R   +  ++   G   D  +Y T+I    +   +  
Sbjct: 246 AGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A+ +L+ +      PN +   T +  L  A R EEA  +  + FD     D   F  +++
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
              +N     VIEV E+M   G  PD      V+N + K    + A  L   M   GC
Sbjct: 366 FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 229/487 (47%), Gaps = 7/487 (1%)

Query: 51  APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
           AP  YTY+ LI C+ +    D  +    ++ +  +  D+  Y+ LI+   K  +  KA  
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           +F +++  GI+P++V Y+++IN   K K   +A  ++ +M   GV+P+ ++Y+ L++ Y 
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
            +  + E++ VF EM+      D+  CN  +    +    K+A  +F SM   G  P V+
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           SY  LL  Y  A       +LF +M  + +  +   +NT+I  Y +    +K+  + ++M
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             +G+ P+ IT+ST+I+ + + G+LD A   F  +  +GV  D  +Y  +I        +
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 414

Query: 351 AHAKRLLHELRQPNTIPR-----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
             AK L+ ++      P       + I  L + GR+ E   V       G+  ++  F  
Sbjct: 415 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 474

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +++ +         + + + M S G  PD +    +++ Y K    + A  L+ +M  + 
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534

Query: 466 CVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
              +   +  +L  L+ AR+     E   E ++S   ++      V+ G+  R N  ++A
Sbjct: 535 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC-RNNCTDEA 593

Query: 525 SRIMNRM 531
           + ++ ++
Sbjct: 594 NMLLEKL 600



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 196/450 (43%), Gaps = 32/450 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  +L     A        LF+ M   G+ PDR+ ++TLI  + + GM D ++  
Sbjct: 291 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M +  V+ D++ +S +I    +L     A+  F+ +  +G+ PD   Y+ +I     
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +   +A+ LI +M  +G+ P  + + ++++N   +  +  E   V   +       +L 
Sbjct: 411 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 470

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D Y  +   K+A  L  SM  +G++P + +YNTL+  Y +     +A+ LFR M
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +    V+YN ++    ++     A  +  EM   G+  +  TY+T++    +    
Sbjct: 531 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 590

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A ML +KL S  V+ D + +  +I A  +VG                           
Sbjct: 591 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG--------------------------- 623

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
               R +EA  +F      G V  I  +  MI    + + + +   +F  M  +   PDS
Sbjct: 624 ----RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 679

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
            I+  ++       E   A +  S++ ++G
Sbjct: 680 RILNEIIRMLLNKGEVAKAGNYLSKIDKKG 709



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 217/505 (42%), Gaps = 46/505 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y+ ++  + + K+ + A  +  +M   G+ P+  TY+ LI  +   GM+
Sbjct: 180 EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMW 239

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY--- 127
             ++   ++M    +  D+   ++ +    K     +A  IF  +   G  PD+++Y   
Sbjct: 240 KESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGAL 299

Query: 128 --------------------------------NTMINVFGKAKLFKEARLLIEEMREQGV 155
                                           NT+IN + +  +  ++ L+ E+M +QGV
Sbjct: 300 LHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGV 359

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL---DMAKD 212
            PD +++ST+++ +    +  +A+  F  M +   P D    + +I   GQ    D+ K 
Sbjct: 360 NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ--GQCNRRDLVK- 416

Query: 213 ADRLFWSMRKMGIDPSVVSYNT-LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           A  L   M   GI P  + + T ++    +     E   +  L+       N++T+N+++
Sbjct: 417 AKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLV 476

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y      ++A  L+  M++ G+EP+  TY+T++  + K G++D A  LF+ +    V 
Sbjct: 477 DGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVT 536

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TIPRETAITI---LARAGRIEEATWV 387
           +  V Y  ++    +      AK + HE+ +    +   T  T+   L R    +EA  +
Sbjct: 537 LTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 596

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             + F      DI  F  +I    +  +     E+F  + + G  P      +++ +  K
Sbjct: 597 LEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIK 656

Query: 448 LREFETADDLYSEMQEEGCVFSDQV 472
              FE AD+L+S M++  C    ++
Sbjct: 657 EESFEDADNLFSSMEKSSCTPDSRI 681



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 140/299 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +  ++ N+ +  +      + D +   G  P+  T+++L+  +   G    A+ 
Sbjct: 431 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 490

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  ME   V  D+  Y+ L++   K      A+++F  +    +    V+YN +++   
Sbjct: 491 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 550

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A+    A+ +  EM E G+     +Y+T+L     N+   EA  +  ++  +N   D+ 
Sbjct: 551 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 610

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+I    ++   ++A  LF ++   G+ P++++Y  ++    + E F +A +LF  M
Sbjct: 611 TFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 670

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++     +    N +I++     E  KA N + ++  +GI P A T S +I ++   GK
Sbjct: 671 EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 729


>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 207/451 (45%), Gaps = 40/451 (8%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + IL+WI +   + P V  +N+++    ++KQW  A   F  M+     P   +++ L+ 
Sbjct: 67  ILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLA 126

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLV---------LYSNLIELARKLSDYSKAISIFS 113
            + +    + A     +M++   S   V          Y+  +E+  K    S+A   F 
Sbjct: 127 AYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFR 186

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
            ++  GI+P +  +  MIN++GKA    +A  L   MR+    P+  +Y+ L+N +    
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG 246

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
             V A  +FAE+  V    D+ T N +++ Y + +    A  +F +M + G+ P  VSYN
Sbjct: 247 NCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYN 306

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            L+  +G A L  +A  ++  M+    +  + ++  ++  Y K+ +  +A  L++E++N 
Sbjct: 307 ILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G++P+   ++++++ +G +G++D    L + + SS  + D     T+I AY         
Sbjct: 367 GVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAY--------- 417

Query: 354 KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
                                 A+ G IE+A  VF      G   D+  +  ++  +++ 
Sbjct: 418 ----------------------AQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQR 455

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           K +   + +F+KM  AG  PD     + L+S
Sbjct: 456 KLFRKCVSIFQKMVKAGCIPDRATAKVFLSS 486



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 201/417 (48%), Gaps = 15/417 (3%)

Query: 94  NLIELARKLSDYSKAISIFSR-LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N+ EL R+L ++   I I    L+ +   PD+  +N +I+ +GK+K ++EA      M++
Sbjct: 53  NVAEL-RRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKD 111

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CP--------LDLTTCNIMIDV 203
               P   S++ LL  Y    +  +A  +F EM E N  P          + T N  ++V
Sbjct: 112 FQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEV 171

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
            G+      A+  F  M+K GI P+V ++  ++ +YG+A    +A  LFR M++     N
Sbjct: 172 LGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPN 231

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           + TY  ++  + +     +A  +  E+Q+ G  P+  TY+ ++  + +      A  +FQ
Sbjct: 232 LYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQ 291

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAG 379
            +  +GV  D V Y  +I A+ R GL A A+ +   +++    P   +  +L    A+AG
Sbjct: 292 AMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG 351

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           ++ EA  + R+  ++G   D  +F  ++  +  + +   +  + E M S+   PD   + 
Sbjct: 352 KVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLN 411

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            ++N+Y +    E A+++++ ++ +G          ++  Y  RK F    S+F+++
Sbjct: 412 TLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKM 468



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 179/393 (45%), Gaps = 13/393 (3%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D+  ++ LI+   K   + +A   F  +K    +P   ++N ++  + +    ++A  L 
Sbjct: 82  DVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLF 141

Query: 148 EEMREQGVKPDTV---------SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            EM+E    P TV         +Y+T L +  ++ +  +A   F +M +      + T  
Sbjct: 142 HEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFT 201

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           IMI++YG+   +  AD LF SMRK    P++ +Y  L+  +        A  +F  +Q  
Sbjct: 202 IMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSV 261

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               +V TYN +++ Y +      A  + Q M   G+ P+ ++Y+ +I  +G+AG    A
Sbjct: 262 GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADA 321

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             ++  ++ +G +     +  ++ +Y + G V  A+RL+ E+     +P+T    + ++ 
Sbjct: 322 QAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSA 381

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              +GRI+E   +      +    DIS    +I  +++        EVF  + S G  PD
Sbjct: 382 YGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPD 441

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
                 ++ +Y + + F     ++ +M + GC+
Sbjct: 442 VMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCI 474



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 172/402 (42%), Gaps = 44/402 (10%)

Query: 145 LLIEEMREQGV--KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           +LI E   QG   KPD   ++ L++ Y ++ ++ EA   F  M +  C    T+ N+++ 
Sbjct: 67  ILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLA 126

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVV---------SYNTLLRVYGEAELFGEAIHLFR 253
            Y +    + A++LF  M++    P  V         +YNT L V G++    +A   FR
Sbjct: 127 AYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFR 186

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQ++ I   V T+  MI IYGK+   +KA +L + M+     PN  TY+ ++    + G
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG 246

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
              RA  +F +L+S G   D   Y  ++ AY R      AK                   
Sbjct: 247 NCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKE------------------ 288

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                        VF+   +AG   D   +  +I+ F R    A+   V++ M+ AG+ P
Sbjct: 289 -------------VFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKP 335

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNMLESL 492
                 L+L+SY K  +   A+ L  E++  G V  D   F  +LS YG     + +ESL
Sbjct: 336 TMKSHMLLLSSYAKAGKVTEAERLVREIENSG-VKPDTFMFNSLLSAYGNSGRIDEMESL 394

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            E + S          + +   Y +   +  A  + N +  +
Sbjct: 395 LESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESK 436


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 203/458 (44%), Gaps = 41/458 (8%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
            +  P   AYN ++  ++   Q+E  H L++EM   G   PD  TYS LI+ F K G  DS
Sbjct: 1179 KCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDS 1238

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            AI  L +M++  +     +Y+ LI L  K +D   A+S+F  ++     PD+  Y  +I 
Sbjct: 1239 AIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIR 1298

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              GKA    EA     EM+ +G +PDTV  + ++N   +  +  +A+ +F EM  + C  
Sbjct: 1299 GLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRC-- 1356

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHL 251
                                              PSVV+YNT+++   E++    E    
Sbjct: 1357 ---------------------------------IPSVVTYNTIIKALFESKSRASEVPSW 1383

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            F  M+   I  +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GK
Sbjct: 1384 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 1443

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            A + D A  LFQ+L+ +       +Y  MI    + G +  A  +  E+ +    P+   
Sbjct: 1444 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 1503

Query: 368  RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                ++ LAR G ++EA    R+  + G + DI+ +  ++   ++       +E+   M+
Sbjct: 1504 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563

Query: 428  SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             +   PD      VL +      FE A  L  EM   G
Sbjct: 1564 QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG 1601



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 197/468 (42%), Gaps = 36/468 (7%)

Query: 25   VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME-QD 83
            V+R +  AK    A  +F +++ R   P    Y+++I     EG ++       +M  + 
Sbjct: 1155 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214

Query: 84   RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
                D V YS LI    KL     AI + + +K  G+ P    Y  +I +F K      A
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 144  RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
              L EEMR Q  +PD  +Y+ L+    +  +  EA   F EM    C  D    N MI+ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 204  YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHLFRLMQRKEIEQ 262
             G+     DA +LF  M  +   PSVV+YNT+++   E++    E    F  M+   I  
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 263  NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + D A  LF
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 323  QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
            Q+L+ +       +Y  MI          H                      L +AGR++
Sbjct: 1455 QELKENCGSSSARVYAVMI---------KH----------------------LGKAGRLD 1483

Query: 383  EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            +A  +F +    G   D+  +  ++   +R       +    +M+  G  PD +   ++L
Sbjct: 1484 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 1543

Query: 443  NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
            N   K      A ++ S M++   V  D V +   ++ GA     M E
Sbjct: 1544 NGLAKTGGPHRAMEMLSNMKQS-TVRPDVVSYN--TVLGALSHAGMFE 1588



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 218/493 (44%), Gaps = 19/493 (3%)

Query: 53   DRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS---KAI 109
            D  TY  LI C      +      +Q+M ++ +   +V  + L ++ R L +     +AI
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNAKMVRQAI 1169

Query: 110  SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNL 168
            +IF ++K+    P   AYN+MI +      +++   L  EM  +G   PDTV+YS L++ 
Sbjct: 1170 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISA 1229

Query: 169  YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            + +  +   A+ +  EM E+          ++I ++ + + A  A  LF  MR     P 
Sbjct: 1230 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPD 1289

Query: 229  VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V +Y  L+R  G+A    EA H F  MQR+    + V  N MI   GK+   + A  L Q
Sbjct: 1290 VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQ 1349

Query: 289  EMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM+     P+ +TY+TII A++    +       F++++ SG+      Y  +I  + + 
Sbjct: 1350 EMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKT 1409

Query: 348  GLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
              +  A  LL E+ +    P   A    I  L +A R + A  +F++  +        V+
Sbjct: 1410 NRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVY 1469

Query: 404  GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
              MI+   +  +  + I +F++M   G  PD +    +++   +    + A      MQE
Sbjct: 1470 AVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQE 1529

Query: 464  EGCVFSDQVHFQMLS----LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
             GC+     +  +L+      G  +   ML ++ +       ++    ++ V G    A 
Sbjct: 1530 HGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS----YNTVLGALSHAG 1585

Query: 520  RLNDASRIMNRMN 532
               +AS++M  MN
Sbjct: 1586 MFEEASKLMKEMN 1598



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 39/340 (11%)

Query: 11   EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
            EE R+    P VF Y  ++R + +A + + A+  F EM++ G  PD    + +I   GK 
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 1338

Query: 68   GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G  D A+   Q+ME  R    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 1339 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 1398

Query: 127  YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LYVE-- 171
            Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++             L+ E  
Sbjct: 1399 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 1458

Query: 172  ---------------NH-----KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
                            H     +  +A+++F EMN++ C  D+   N ++    +  M  
Sbjct: 1459 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 1518

Query: 212  DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            +A      M++ G  P + SYN +L    +      A+ +   M++  +  +VV+YNT++
Sbjct: 1519 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 1578

Query: 272  KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                 +   E+A+ LM+EM   G E + ITYS+I+   GK
Sbjct: 1579 GALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 2/272 (0%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
            E  R  PSV  YN +++ +  +K +       F+ M++ GI+P  +TYS LI  F K   
Sbjct: 1352 ETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 1411

Query: 70   FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             + A+  L++M++         Y +LI+   K   Y  A  +F  LK +        Y  
Sbjct: 1412 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 1471

Query: 130  MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
            MI   GKA    +A  + +EM + G  PD  +Y+ L++         EALS    M E  
Sbjct: 1472 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 1531

Query: 190  CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
            C  D+ + NI+++   +      A  +  +M++  + P VVSYNT+L     A +F EA 
Sbjct: 1532 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAS 1591

Query: 250  HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             L + M     E +++TY+++++  GK ++HE
Sbjct: 1592 KLMKEMNTLGFEYDLITYSSILEAIGK-VDHE 1622



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 174/385 (45%), Gaps = 11/385 (2%)

Query: 158  DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDAD 214
            DT +Y  L++      ++ E   +  EM  V  P+ + T   + DV    G   M + A 
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEM--VRNPICVVTPTELSDVVRMLGNAKMVRQAI 1169

Query: 215  RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKI 273
             +F+ ++     P   +YN+++ +      + +   L+  M  +     + VTY+ +I  
Sbjct: 1170 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISA 1229

Query: 274  YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            + K    + A  L+ EM+  G++P    Y+ +IA++ K      A  LF+++R      D
Sbjct: 1230 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPD 1289

Query: 334  PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
               Y  +I    + G +  A     E+++    P+T+     I  L +AGR+++A  +F+
Sbjct: 1290 VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQ 1349

Query: 390  QAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +      +  +  +  +I+ LF    + + V   FE+M+ +G  P S   +++++ + K 
Sbjct: 1350 EMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKT 1409

Query: 449  REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
               E A  L  EM E+G       +  ++   G  K +++   LF+ L  +   +   ++
Sbjct: 1410 NRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVY 1469

Query: 509  HVVAGIYERANRLNDASRIMNRMNK 533
             V+     +A RL+DA  + + MNK
Sbjct: 1470 AVMIKHLGKAGRLDDAINMFDEMNK 1494


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 206/442 (46%), Gaps = 7/442 (1%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           R  +P+RYT+  ++  F K+G         +QM  + +S D + Y+ LI+   K     +
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A  ++  + S G+ P +  YN+++N F K    KEA  L + M E+G +PD V+YST+++
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 168 LYVENHKFVEALS-VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
              +  K  EAL  +F +M E  C  +    N +I+   + +  + A +L   M   G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P  ++YNT+L          EA   F  M  +    +VV YN ++    K  + ++A  L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            +++  +G  P+ +TY++I+    +   +D A  +F+K+ +SG   +   Y  ++  + R
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISV 402
              V  A ++L E+ +   +P      I    L +   +++A  +F    D G   DI  
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  ++    +  K  +   +F++M      PD     ++++   K  + + A DL  +M 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421

Query: 463 EEGCVFSDQVHFQMLSLYGARK 484
             GC   D V +  L + G RK
Sbjct: 422 CSGCA-PDYVAYNTL-MNGLRK 441



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 209/455 (45%), Gaps = 5/455 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ + + VVL++  +  +    + LF++M   GI+PD   Y+ LI  + K+G  D A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M    +   +  Y++L+    K +   +A+ +F  +   G  PD+V Y+T+I+   
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 136 KAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           K     EA  +L  +M E+G   +TV+Y+ L+N   ++     A  +  EM       D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++    ++    +A + F SM   G  P VV+YN LL    +     EA+ LF+ 
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  K    + VTYN+++    +    ++A  + ++M   G  PN  TYS +++   +A K
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           +D A  + +++   G   D V Y  ++    +  LV  A  L   +      P+ +    
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L +  ++ +A  +F +  +   V D+  F  +++   +  K     ++ ++M  +G
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             PD      ++N   K      AD L   M+E+G
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 192/425 (45%), Gaps = 5/425 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP    YN+++    +  + + A+ L++EM   G+ P  YTY++L+  F KE     A+ 
Sbjct: 40  SPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME 99

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS-IFSRLKSSGIVPDLVAYNTMINVF 134
             + M +     D+V YS +I    K    ++A+  +F ++   G   + VAYN +IN  
Sbjct: 100 LFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +  + A  L+EEM  +G  PD ++Y+T+L+      K  EA   F  M       D+
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDV 219

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N ++D   +     +A +LF  +   G  P  V+YN++L          EA  +F+ 
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 279

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N  TY+ ++  + ++ + + A  +++EM   G  P+ +TY+ ++    K   
Sbjct: 280 MVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D+A  LF  +  +G   D V Y  ++    +   V  A+ L   + +   +P      I
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 399

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     +AG+++EA  +  Q   +G   D   +  ++    +  ++     + + M+  G
Sbjct: 400 LMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459

Query: 431 YFPDS 435
           +  D 
Sbjct: 460 FLSDC 464



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 2/281 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    YN +L  + R  +   A   FD M  RG +PD   Y+ L+    KEG  D A+
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239

Query: 75  SWLQQMEQDRVSGDLVLYSN-LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              + +       D V Y++ L+ LARK S+  +A  +F ++ +SG  P+   Y+ +++ 
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARK-SNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +AK   +A  ++EEM + G  PD V+Y+ LL+   + +   +A  +F+ M +  C  D
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + + +++++   + +   DA  LF  M +  + P VV++N L+    +A    EA  L  
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
            M       + V YNT++    K   H +A  L Q M+ +G
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 5/291 (1%)

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           +D  +LF  M   GI P  + YN L+  Y +     EA  L+  M    +E ++ TYN++
Sbjct: 25  RDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSL 84

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA-AMLFQKLRSSG 329
           +  + K  + ++A  L + M  +G EP+ +TYSTII+   K GK+  A  MLF K+   G
Sbjct: 85  LNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
              + V Y  +I    +   +  A +LL E+      P+ I   T ++ L R G++ EA 
Sbjct: 145 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAK 204

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             F      G   D+  +  +++   +  K    +++F+ + + GY PD+     +L   
Sbjct: 205 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 264

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            +    + A++++ +M   GC  +   +  +LS +   K  +    + E +
Sbjct: 265 ARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 31/447 (6%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           + +YN VL+ +  AK+W     L DEM +   AP+  T++TLI    + G+F+     L 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     A+
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +KEA  L+ EM ++    D V+++ L++ + +N      + +  +M    C  D+ T  
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+ + +  +  +A  L  SM   G  P+ VSY  +L+    A  + +A  L   M ++
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             L   + + G+  + ++Y ++  A                               L+R 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACA-------------------------------LSRE 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR+ +   +F    D     D  ++  +I    +  +    I+ F  M S G  P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++         + A +L SE+   G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 7/441 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + +  V+R +    +   A  + DEM  +G AP    Y  ++    + G F +++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M     + D    + ++    +     +A+ +  +L   G   D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK + +   L++EM      P+ V+++TL+     N  F     V A+M+E  C  D+  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A+ +   M   G+ P+VV YNT+L+    AE + EA  L   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K+   + VT+N ++  + ++   ++   L+++M + G  P+ ITY+T+I  + K G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A ML + + S G + + V Y  ++      G    A+ L+ ++ Q    PN +   T I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +E+A  + +Q    G   D+  +  +I+   +  K    +E+   M + G  
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 433 PDSHI---IALVLNSYGKLRE 450
           P++ I   IA  L+  G++ +
Sbjct: 529 PNTIIYSSIACALSREGRVNK 549



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN VL+ +  A++W+ A  L  EM Q+    D  T++ L+  F + G+ D  I  
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+QM                                    S G +PD++ Y T+IN F K
Sbjct: 379 LEQM-----------------------------------LSHGCMPDVITYTTVINGFCK 403

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L  EA +L++ M   G KP+TVSY+ +L       ++V+A  + ++M +  CP +  T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L  +M 
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  N + Y+++     +     K   +   +++  I  +A+ Y+ +I+   K  + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           RA   F  + S+G   +   Y  +I      GL   A+ LL EL
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 190/455 (41%), Gaps = 41/455 (9%)

Query: 124 LVAYNTMINVFGKA---------------------------KLFKEARL-----LIEEMR 151
           +VAYN M+  + +A                            L    R+     +++EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            +G  P    Y  +L     +  F  ++ V   M+   C LD   CN++++   +     
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A  L   +   G +  +VSYN +L+    A+ +G+   L   M R +   N+VT+NT+I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               ++   E+   ++ +M   G  P+   Y+TII    K G L+ A  +  ++ S G++
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
            + V Y T++           A+ LL E+ Q +    +    IL     + G ++    +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q    G + D+  +  +I  F +       + + + M S G  P++    +VL     
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSDSNINKK 505
              +  A++L S+M ++GC   + V F  L  +  +K      +E L + L +  + +  
Sbjct: 439 AGRWVDAEELMSQMIQQGCP-PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM-NKRRTFNS 539
               V+ G+  +A +  +A  ++N M NK  + N+
Sbjct: 498 SYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNT 531


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 198/405 (48%), Gaps = 9/405 (2%)

Query: 6   LDWINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           L++I E +    + P  + +N ++  + +A   + A  + D M Q G  PD YTY+++I+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K G    A+ +L QM     S + V Y+ LI    K +   +A  +   L S GI+P
Sbjct: 339 GLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+  +N++I      +  + A  L EEMR +G +PD  +Y+ L++      K  EAL++ 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            +M    C   + T N +ID + + +  ++A+ +F  M   G+  + V+YNTL+    ++
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               +A  L   M  +  + +  TYN+++  + +  + +KA +++Q M + G EP+ +TY
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LR 361
            T+I+   KAG+++ A+ L + ++  G+ + P  Y  +I    R      A  L  E L 
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 362 QPNTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDIS 401
           Q    P   +  I+ R      G I EA     +  + G V + S
Sbjct: 639 QNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 186/389 (47%), Gaps = 9/389 (2%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + NV++    +  + E A     EM  Q G  PD+YT++TL+    K G    AI  +  
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q+    D+  Y+++I    KL +  +A+    ++ +    P+ V YNT+I+   K   
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLN--LYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +EA  L   +  +G+ PD  ++++L+       NH+   A+ +F EM    C  D  T 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTY 438

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N++ID         +A  +   M   G   SV++YNTL+  + +A    EA  +F  M+ 
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             + +N VTYNT+I    KS   E A+ LM +M   G +P+  TY++++  + + G + +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----IT 373
           AA + Q + S+G E D V Y T+I    + G V  A +LL  ++         A    I 
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQ 618

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISV 402
            L R  +  EA  +FR+  +  E    +V
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAAPDAV 647



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 219/466 (46%), Gaps = 5/466 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +NV+++ + RA Q   A  + ++M   G+ PD  T++T++  + +EG  D A+  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIVPDLVAYNTMINVFG 135
            +QM +   S   V  + ++    K      A++    + +  G  PD   +NT++N   
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   K A  +++ M ++G  PD  +Y+++++   +  +  EA+    +M   +C  +  
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I    + +  ++A  L   +   GI P V ++N+L++          A+ LF  M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K  E +  TYN +I       + ++A N++++M+  G   + ITY+T+I  + KA K+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
             A  +F ++   GV  + V Y T+I    +   V  A +L+ ++    ++P+     + 
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +T   R G I++A  + +     G   DI  +G +I    +  +     ++   ++  G 
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               H    V+    + R+   A +L+ EM E+     D V ++++
Sbjct: 607 ALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 213/488 (43%), Gaps = 6/488 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + ++ W+ ++    P    YN +L  ++     +L      +M   GI PD  T++ LI 
Sbjct: 138 LGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIK 197

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              +      AI  L+ M    +  D   ++ +++   +  D   A+ I  ++   G   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSV 181
             V+ N +++ F K    ++A   I+EM  Q G  PD  +++TL+N   +      A+ +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M +     D+ T N +I    +L   K+A      M      P+ V+YNTL+    +
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCK 377

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA  L R++  K I  +V T+N++I+    +  H  A  L +EM+++G EP+  T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ +I      GKLD A  + +++  SG     + Y T+I  + +   +  A+ +  E+ 
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                 N++   T I  L ++ R+E+A+ +  Q    G+  D   +  ++  F R     
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIK 557

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              ++ + M S G  PD      +++   K    E A  L   +Q +G   +   +  ++
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVI 617

Query: 478 -SLYGARK 484
             L+  RK
Sbjct: 618 QGLFRKRK 625



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 207/446 (46%), Gaps = 13/446 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ- 153
           L+ L R  S +     I   +K+SG       +  +I  + + +L  E   ++  M +  
Sbjct: 90  LLRLGRSGS-FDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDF 148

Query: 154 GVKPDTVSYSTLLNLYVE--NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           G+KPDT  Y+ +LNL V+  N K VE     A+M+      D++T N++I    +    +
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEI--AHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            A  +   M   G+ P   ++ T+++ Y E      A+ +   M       + V+ N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 272 KIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
             + K    E A N +QEM N+ G  P+  T++T++    KAG +  A  +   +   G 
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATW 386
           + D   Y ++I    ++G V  A   L ++      PNT+   T I+ L +  ++EEAT 
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           + R     G + D+  F  +I+     + +   +E+FE+MRS G  PD     ++++S  
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS-NINKK 505
              + + A ++  +M+  GC  S   +  ++  +         E +F+ ++    + N  
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM 531
             + ++ G+  ++ R+ DAS++M++M
Sbjct: 507 TYNTLIDGLC-KSRRVEDASQLMDQM 531


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 199/405 (49%), Gaps = 9/405 (2%)

Query: 6   LDWINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           L++I E +    + P  + +N ++  + +A   + A  + D M Q G  PD YTY+++I+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K G    A+  L QM     S + V Y+ LI    K +   +A  +   L S GI+P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+  +N++I      +  + A  L EEMR +G +PD  +Y+ L++      K  EAL++ 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            +M    C   + T N +ID + + +  ++A+ +F  M   G+  + V+YNTL+    ++
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               +A  L   M  +  + +  TYN+++  + +  + +KA +++Q M + G EP+ +TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            T+I+   KAG+++ A+ L + ++  G+ + P  Y  +I    R      A  L  E+ +
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 363 PNTIPRET-AITILAR-----AGRIEEATWVFRQAFDAGEVKDIS 401
            N  P +  +  I+ R      G I EA     +  + G V + S
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 192/392 (48%), Gaps = 15/392 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + NV++    +  + E A     EM  Q G  PD+YT++TL+    K G    AI  +  
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q+    D+  Y+++I    KL +  +A+ +  ++ +    P+ V YNT+I+   K   
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLN--LYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +EA  L   +  +G+ PD  ++++L+       NH+   A+ +F EM    C  D  T 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTY 438

Query: 198 NIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N++ID     G+LD   +A  +   M   G   SV++YNTL+  + +A    EA  +F  
Sbjct: 439 NMLIDSLCSKGKLD---EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   + +N VTYNT+I    KS   E A  LM +M   G +P+  TY++++  + + G 
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH--ELRQPNTIPR--ET 370
           + +AA + Q + S+G E D V Y T+I    + G V  A +LL   +++  N  P     
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            I  L R  +  EA  +FR+  +  E    +V
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 206/468 (44%), Gaps = 5/468 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           ++++DW+ +E    P    YN +L  ++     +L      +M   GI PD  T++ LI 
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              +      AI  L+ M    +  D   ++ +++   +  D   A+ I  ++   G   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSV 181
             V+ N +++ F K    ++A   I+EM  Q G  PD  +++TL+N   +      A+ +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M +     D+ T N +I    +L   K+A  +   M      P+ V+YNTL+    +
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                EA  L R++  K I  +V T+N++I+    +  H  A  L +EM+++G EP+  T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ +I      GKLD A  + +++  SG     + Y T+I  + +      A+ +  E+ 
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                 N++   T I  L ++ R+E+A  +  Q    G+  D   +  ++  F R     
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              ++ + M S G  PD      +++   K    E A  L   +Q +G
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/494 (22%), Positives = 212/494 (42%), Gaps = 43/494 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAH-GLFD-EMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +S ++ + +V L + LR++  + A   LF+   ++   +P+   Y  ++   G+ G FD 
Sbjct: 42  HSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDD 101

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIE-----------------------LARKLSDYSKAI 109
               L+ M+  R       +  LIE                       L      Y++ +
Sbjct: 102 MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML 161

Query: 110 SIF-------------SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           ++              +++   GI PD+  +N +I    +A   + A L++E+M   G+ 
Sbjct: 162 NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD  +++T++  Y+E      AL +  +M E  C     + N+++  + +    +DA   
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281

Query: 217 FWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
              M    G  P   ++NTL+    +A     AI +  +M ++  + +V TYN++I    
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  E ++A  ++ +M  R   PN +TY+T+I+   K  +++ A  L + L S G+  D  
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQA 391
            + ++I           A  L  E+R     P E      I  L   G+++EA  + +Q 
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             +G  + +  +  +I+ F +  K     E+F++M   G   +S     +++   K R  
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 452 ETADDLYSEMQEEG 465
           E A  L  +M  EG
Sbjct: 522 EDAAQLMDQMIMEG 535



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 212/461 (45%), Gaps = 15/461 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ- 153
           L+ L R  S +     I   +KSS        +  +I  + + +L  E   +++ M ++ 
Sbjct: 90  LLRLGRSGS-FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF 148

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+KPDT  Y+ +LNL V+ +         A+M+      D++T N++I    +    + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +   M   G+ P   ++ T+++ Y E      A+ +   M       + V+ N ++  
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 274 YGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           + K    E A N +QEM N+ G  P+  T++T++    KAG +  A  +   +   G + 
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVF 388
           D   Y ++I    ++G V  A  +L ++      PNT+   T I+ L +  ++EEAT + 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           R     G + D+  F  +I+     + +   +E+FE+MRS G  PD     ++++S    
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS-NINKKEL 507
            + + A ++  +M+  GC  S   +  ++  +         E +F+ ++    + N    
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 508 HHVVAGIYERANRLNDASRIMNRM------NKRRTFNSSLV 542
           + ++ G+  ++ R+ DA+++M++M        + T+NS L 
Sbjct: 509 NTLIDGLC-KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 235/504 (46%), Gaps = 10/504 (1%)

Query: 37  LAHGLFDEMRQRGI---APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS 93
           LA  LF  M +      AP  YTY+ LI C+ +    D  +    ++ +  +  D+  Y+
Sbjct: 169 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYN 228

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            LI+   K  +  KA  +F +++  GI+P++V Y+++IN   K K   +A  ++ +M   
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           GV+P+ ++Y+ L++ Y  +  + E++ VF EM+      D+  CN  +    +    K+A
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F SM   G  P V+SY  LL  Y  A       +LF +M  + +  +   +NT+I  
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 408

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y +    +K+  + ++M  +G+ P+ IT+ST+I+ + + G+LD A   F  +  +GV  D
Sbjct: 409 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-----ETAITILARAGRIEEATWVF 388
             +Y  +I        +  AK L+ ++      P       + I  L + GR+ E   V 
Sbjct: 469 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 528

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
                 G+  ++  F  +++ +         + + + M S G  PD +    +++ Y K 
Sbjct: 529 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 588

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKEL 507
              + A  L+ +M  +    +   +  +L  L+ AR+     E   E ++S   ++    
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 648

Query: 508 HHVVAGIYERANRLNDASRIMNRM 531
             V+ G+  R N  ++A+ ++ ++
Sbjct: 649 ATVLGGLC-RNNCTDEANMLLEKL 671



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 196/450 (43%), Gaps = 32/450 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  +L     A        LF+ M   G+ PDR+ ++TLI  + + GM D ++  
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M +  V+ D++ +S +I    +L     A+  F+ +  +G+ PD   Y+ +I     
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSY-STLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +   +A+ LI +M  +G+ P  + + ++++N   +  +  E   V   +       +L 
Sbjct: 482 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D Y  +   K+A  L  SM  +G++P + +YNTL+  Y +     +A+ LFR M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +    V+YN ++    ++     A  +  EM   G+  +  TY+T++    +    
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 661

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A ML +KL S  V+ D + +  +I A  +VG                           
Sbjct: 662 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG--------------------------- 694

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
               R +EA  +F      G V  I  +  MI    + + + +   +F  M  +   PDS
Sbjct: 695 ----RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 750

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
            I+  ++       E   A +  S++ ++G
Sbjct: 751 RILNEIIRMLLNKGEVAKAGNYLSKIDKKG 780



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 217/505 (42%), Gaps = 46/505 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y+ ++  + + K+ + A  +  +M   G+ P+  TY+ LI  +   GM+
Sbjct: 251 EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMW 310

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY--- 127
             ++   ++M    +  D+   ++ +    K     +A  IF  +   G  PD+++Y   
Sbjct: 311 KESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGAL 370

Query: 128 --------------------------------NTMINVFGKAKLFKEARLLIEEMREQGV 155
                                           NT+IN + +  +  ++ L+ E+M +QGV
Sbjct: 371 LHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGV 430

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL---DMAKD 212
            PD +++ST+++ +    +  +A+  F  M +   P D    + +I   GQ    D+ K 
Sbjct: 431 NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ--GQCNRRDLVK- 487

Query: 213 ADRLFWSMRKMGIDPSVVSYNT-LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           A  L   M   GI P  + + T ++    +     E   +  L+       N++T+N+++
Sbjct: 488 AKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLV 547

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y      ++A  L+  M++ G+EP+  TY+T++  + K G++D A  LF+ +    V 
Sbjct: 548 DGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVT 607

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TIPRETAITI---LARAGRIEEATWV 387
           +  V Y  ++    +      AK + HE+ +    +   T  T+   L R    +EA  +
Sbjct: 608 LTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 667

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             + F      DI  F  +I    +  +     E+F  + + G  P      +++ +  K
Sbjct: 668 LEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIK 727

Query: 448 LREFETADDLYSEMQEEGCVFSDQV 472
              FE AD+L+S M++  C    ++
Sbjct: 728 EESFEDADNLFSSMEKSSCTPDSRI 752



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 140/299 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +  ++ N+ +  +      + D +   G  P+  T+++L+  +   G    A+ 
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  ME   V  D+  Y+ L++   K      A+++F  +    +    V+YN +++   
Sbjct: 562 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 621

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A+    A+ +  EM E G+     +Y+T+L     N+   EA  +  ++  +N   D+ 
Sbjct: 622 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 681

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+I    ++   ++A  LF ++   G+ P++++Y  ++    + E F +A +LF  M
Sbjct: 682 TFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 741

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++     +    N +I++     E  KA N + ++  +GI P A T S +I ++   GK
Sbjct: 742 EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 224/459 (48%), Gaps = 9/459 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N  L  + +  + +L++  F +M   GIA   +TY+ +I    KEG   +A
Sbjct: 212 RVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTA 271

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S   QM+Q  ++ D+V Y++LI+   KL    ++  +F  +K  G  PD++ YN +IN 
Sbjct: 272 KSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINC 331

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K +   +A   + EM+  G+KP+ V+YSTL++   + H   +A+    +M  V    +
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPN 391

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID   +     DA +L   M ++ +  +VV+Y TLL    +     EA  LFR
Sbjct: 392 EFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFR 451

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M +  +  N+ TY  ++  + K+   E A  L++E++ + I+P+ + Y TI  IWG   
Sbjct: 452 AMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTI--IWGLCS 509

Query: 314 --KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
             KL+    +  ++++ G+  + V+Y   + AY + G    A  LL E+     +   + 
Sbjct: 510 QNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVT 569

Query: 368 RETAITILARAGRIEEATWVFRQAFDAG-EVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
               I  L + G +EEA   F +  D   +  +++V   +I+   +N       ++F++M
Sbjct: 570 FCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEM 629

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     PD      +++   K ++F+ A ++ S M E G
Sbjct: 630 QDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 212/429 (49%), Gaps = 5/429 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  + SVF YN+++  + +      A  LF +M+Q G+ PD  TY++LI  +GK G+ D 
Sbjct: 246 AGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDE 305

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           +    ++M+      D++ Y+ LI    K     KA      +K+SG+ P++V Y+T+I+
Sbjct: 306 SFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID 365

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K  + ++A   + +MR  G+ P+  +Y++L++   +     +AL +  EM +V    
Sbjct: 366 ALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF 425

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   ++D   +     +A+ LF +M K G+ P++ +Y  L+  + + +    A+ L 
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + ++ K+I+ +++ Y T+I       + E+   +M EM+  GI  N++ Y+  +  + K 
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPR 368
           GK   A  L Q++   GVE+  V +  +I    + GLV  A     R+     QPN +  
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAV 605

Query: 369 ETA-ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            TA I  L +   IE A  +F +  D   V D   +  +I+   ++K +   + +  +M 
Sbjct: 606 CTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMS 665

Query: 428 SAGYFPDSH 436
             G   D H
Sbjct: 666 ELGMELDLH 674



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 198/467 (42%), Gaps = 31/467 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPD----RYTYSTLIT 62
           W   +  +  +  +Y +++  +  A+ +  A+    E+   R I P        +ST   
Sbjct: 118 WAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNV 177

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
           C    G+FD+                  L+S  IEL        +A   FSR+    + P
Sbjct: 178 CVPGFGVFDA------------------LFSVFIELGM----LEEAGQCFSRMTRFRVFP 215

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
              + N  +    K      +     +M   G+     +Y+ ++    +    V A S+F
Sbjct: 216 KARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLF 275

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            +M ++    D+ T N +ID YG+L +  ++  LF  M+ +G +P V++YN L+  + + 
Sbjct: 276 HQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKY 335

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           E   +A H    M+   ++ NVVTY+T+I    K    ++A   + +M+  G+ PN  TY
Sbjct: 336 EQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTY 395

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +++I    KAG L  A  L  ++    V  + V Y T++    + G +  A+ L   + +
Sbjct: 396 TSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIK 455

Query: 363 PNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               P     T L        R+E A  + ++  +     D+ ++G +I       K   
Sbjct: 456 AGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEE 515

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              V  +M++ G   +S I  + +++Y K  +   A +L  EM + G
Sbjct: 516 CEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y  ++  +    + E    +  EM+  GI  +   Y+  +  + K G    A++ 
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT-MINVFG 135
           LQ+M    V   +V +  LI+   K     +AI  F+R+    + P+ VA  T +I+   
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    + A+ L +EM+++ + PD ++Y+ L++  +++  F EAL++ + M+E+   LDL 
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLH 674

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               ++    Q ++ + A      M   GI P  +    LLR Y E     EAI L
Sbjct: 675 AYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST-LITCFGKEGMFDSAISW 76
           ++  + V++  + +    E A   F  M    + P+     T LI    K    ++A   
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M+   +  D + Y+ LI+   K  D+ +A++I SR+   G+  DL AY +++    +
Sbjct: 626 FDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQ 685

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             L ++AR+ + EM  +G+ PD +    LL  Y E     EA+ +  E+ +   PLD
Sbjct: 686 GNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK-KVPLD 741


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/561 (21%), Positives = 257/561 (45%), Gaps = 71/561 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R  P  +AYN ++     A++++ A+ L + +R+RG  P   ++++++TC GK+   
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 367

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++    M++D    ++  Y+ +I++       ++A  I   ++ +G+ P+L++ N M
Sbjct: 368 DEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----N 186
           ++   KA   +EA  + E   E+G  P++V+Y +L++   +  K  +A  +F +M    +
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486

Query: 187 EVNCPL--------------------------------DLTTCNIMIDVYGQLDMAKDAD 214
           + N P+                                DLT  N  +D   +    +   
Sbjct: 487 DAN-PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            +F  M+  G  P V SY+ L+    +A    E  ++F+ M ++    +   YN ++   
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS + +KA  +++EM+ + + P   TY +I+    K  +LD A MLF++ +S G+E++ 
Sbjct: 606 CKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 665

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           +LY ++I  + +VG                               RI+EA  +  +    
Sbjct: 666 ILYSSLIDGFGKVG-------------------------------RIDEAYLILEEMMKK 694

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   ++  +  +++   + ++    +  F+ M+     P+++  ++++N   +++++  A
Sbjct: 695 GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 754

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAG 513
              + EMQ++G + +   +  M+S      +     SLFER  ++  I +    + ++ G
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEG 814

Query: 514 IYERANRLNDASRIMNRMNKR 534
           +   ANR  +A ++      R
Sbjct: 815 M-SNANRPMEAYQVFEETRLR 834



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 221/459 (48%), Gaps = 5/459 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++  Y  SV  +  ++R + R  Q E A  L DE++   + PD   Y+  I CFGK G  
Sbjct: 203 QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  +  +++   +  D V Y++++ +  K     +A  +F ++++   VP   AYNTM
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +G A+ F +A  L+E +RE+G  P  VS++++L    +  K  EAL++F  M +   
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK 382

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P +++T NI+ID+        +A ++   M   G+ P+++S N ++    +A    EA  
Sbjct: 383 P-NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F     +    N VTY ++I   GK  + + A  L ++M + G + N I Y+++I  + 
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP--R 368
             G+ +    +++++   G   D  L  T +    + G V   + +  +++    +P  R
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR 561

Query: 369 ETAITI--LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +I I  L +AG+  E + +F+     G   D   +  +++   ++ K     EV E+M
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM 621

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     P       +++   K+   + A  L+ E + +G
Sbjct: 622 KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 220/482 (45%), Gaps = 42/482 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A   ++  ++R+++ E A  +   MR     P    Y+ LI    +    + A+  L+QM
Sbjct: 143 ACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQM 202

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +       + L++ L+    +      A+++   +K S + PD+V YN  I+ FGKA   
Sbjct: 203 QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN-EVNCPLDLTTCNI 199
             A     E++  G++PD VSY++++ +  +  +  EA  +F +M  E + P      N 
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAY-NT 321

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           MI  YG  +   DA +L   +R+ G  PSVVS+N++L   G+     EA+ LF +M +K+
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKD 380

Query: 260 IEQNVVTYNTMIKI-----------------------------------YGKSLEHEKAT 284
            + N+ TYN +I +                                     K+ + E+A 
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            + +    RG  PN++TY ++I   GK GK+D A  LF+K+  +G + +P++Y ++I  +
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500

Query: 345 ERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
              G      ++  E+     +P+     T +  + +AG +E+   +F      G + D+
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV 560

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  +I   ++  +      +F+ M   G+  D+     V++   K  + + A ++  E
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620

Query: 461 MQ 462
           M+
Sbjct: 621 MK 622



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 198/418 (47%), Gaps = 4/418 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ + N+++  + +A Q E AH +F+   +RG  P+  TY +LI   GK+G  D A   
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M       + ++Y++LI              I+  +   G  PDL   NT ++   K
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK 537

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   ++ R + E+M+  G  PD  SYS L++   +  +  E  ++F  M++    LD   
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +      A  +   M+   + P+V +Y +++    + +   EA  LF   +
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K IE NV+ Y+++I  +GK    ++A  +++EM  +G+ PN  T+++++    K  ++D
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A + FQ ++      +   Y  +I    RV     A     E+++    PN +   T I
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           + LA+ G I +A  +F +    G + D + F  +IE  S   +     +VFE+ R  G
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 155/307 (50%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V +Y++++  + +A Q      +F  M Q+G A D   Y+ ++    K G  D A 
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M+   V   +  Y ++++   K+    +A  +F   KS GI  +++ Y+++I+ F
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGF 675

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK     EA L++EEM ++G+ P+  ++++L++  V+  +  EAL  F  M E+ C  + 
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +I+I+   ++     A   +  M+K G+ P+VV+Y T++    +     +A  LF  
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +      +  ++N +I+    +    +A  + +E + RG   N  T  +++    K   
Sbjct: 796 FKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTEC 855

Query: 315 LDRAAML 321
           L++AA++
Sbjct: 856 LEQAAIV 862



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 166/371 (44%), Gaps = 8/371 (2%)

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           +R+L D  + I     LK     P   AY  +I    +A+  + A  L+ +M++ G +  
Sbjct: 154 SRRLEDAFRVIGAMRHLK---FRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVS 210

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
              ++TL+       +   AL++  E+       D+   N+ ID +G+      A + F 
Sbjct: 211 VPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFH 270

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            ++  G+ P  VSY +++ V  +A   GEA  LF  M+ +        YNTMI  YG + 
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             + A  L++ ++ RG  P+ +++++I+   GK  K+D A  LF  ++    + +   Y 
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYN 389

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDA 394
            +I      G V  A ++  E+      P   ++ I    L +A ++EEA  +F  A + 
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   +   +  +I+   +  K  +   +FEKM  AG+  +  I   ++ ++      E  
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 455 DDLYSEMQEEG 465
             +Y EM   G
Sbjct: 510 HKIYKEMIRRG 520



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 173/430 (40%), Gaps = 46/430 (10%)

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           LL      Q + PD  +Y+ +L     +H       V  EM+ +   L    C  ++   
Sbjct: 96  LLASASSSQPLPPD--AYNAVLPFL--SHDLAALEKVLEEMSHLGYGLPNPACAALVATL 151

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +    +DA R+  +MR +   P   +Y  L+    EA     A+ L R MQ    E +V
Sbjct: 152 VRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSV 211

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
             + T+++   +  + E A  L+ E++   +EP+ + Y+  I  +GKAG +D A   F +
Sbjct: 212 PLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHE 271

Query: 325 LRSSGVEIDPV-----------------------------------LYQTMIVAYERVGL 349
           L++ G+  D V                                    Y TMI+ Y     
Sbjct: 272 LKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAER 331

Query: 350 VAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              A +LL  LR+   IP      + +T L +  +++EA  +F          +IS +  
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNI 390

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I++     +     ++ ++M  AG FP+   + ++++   K  + E A  ++    E G
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFER-LDSDSNINKKELHHVVAGIYERANRLNDA 524
           C  +   +  ++   G +   +    LFE+ LD+  + N      ++   +    R  D 
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG-RKEDG 509

Query: 525 SRIMNRMNKR 534
            +I   M +R
Sbjct: 510 HKIYKEMIRR 519



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 93/173 (53%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V+ +N ++  +++ ++ + A   F  M++   +P+ YTYS LI    +   ++ A  
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + Q+M++  +  ++V Y+ +I    K+ + + A S+F R K++G +PD  ++N +I    
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMS 816

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            A    EA  + EE R +G + +  +  +LL+   +     +A  V A ++E+
Sbjct: 817 NANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEI 869


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 223/483 (46%), Gaps = 8/483 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I D I       P+   ++ +L+ + +AK    A  +F +++ R   P    Y+TLI   
Sbjct: 147 IQDMIRSPCSVGPA--EWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILML 204

Query: 65  GKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             EG  +       ++  +   S D + YS LI    KL  Y  A  +F  +K +G+ P 
Sbjct: 205 MHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPT 264

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
              Y T++ ++ K    + A  L+EEM+ +G  P   +Y+ L+    +  +  +A S+F 
Sbjct: 265 EKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFF 324

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M +  C  D+   N +I++ G+    +DA +LF  M  +   P+VV+YNT+++   E++
Sbjct: 325 NMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESK 384

Query: 244 L-FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA   F  M+   I  +  TY  +I  + K+   EKA  L++EM  +G  P    Y
Sbjct: 385 APASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAY 444

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            ++I   G+A + + A  LFQ+L+ +       +Y  MI  +   G ++ A  L  E+++
Sbjct: 445 CSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKK 504

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               P+       ++ + RAG I+EA  + R   + G   DI     ++   ++      
Sbjct: 505 LGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKR 564

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            IE+F KM+ +   PD+     +L+   +   FE A  L  EM+ +G  +    +  +L 
Sbjct: 565 AIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILE 624

Query: 479 LYG 481
             G
Sbjct: 625 AVG 627



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 173/367 (47%), Gaps = 36/367 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  +L    +  + E A  L +EM+ +G AP  +TY+ LI   GK G  D A S 
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN-VFG 135
              M +D    D+VL +NLI +  +      A+ +F ++ S    P++V YNT+I  +F 
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN---CPL 192
                 EA L  E+M+  G+ P + +Y+ L++ + + ++  +AL +  EM+E     CP 
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442

Query: 193 DLTT------------------------CN--------IMIDVYGQLDMAKDADRLFWSM 220
              +                        C         +MI  +G      DA  LF  M
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM 502

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K+G  P V +YN L+     A +  EA  L R M+      ++ ++N ++    K+   
Sbjct: 503 KKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A  +  +M+   I P+A++Y+TI++   +AG  + AA L ++++  G E D + Y ++
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 341 IVAYERV 347
           + A  +V
Sbjct: 623 LEAVGKV 629



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 189/438 (43%), Gaps = 16/438 (3%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           SD  KAI +        +V  ++  +  + +  K + FK A       + Q  + D+ +Y
Sbjct: 76  SDAEKAIEVLKLKVDHRLVHQVLDID--VEIRAKIQFFKWAG------KRQHFQHDSTTY 127

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
             L+    E+    E      +M    C +     + ++ + G+  M   A  +F+ ++ 
Sbjct: 128 MALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKG 187

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLF--RLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              +P+   YNTL+ +    E   E IH     +        + +TY+ +I  +GK   +
Sbjct: 188 RKCNPTATVYNTLILMLMH-EGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  L  EM+  G+ P    Y+TI+A++ K  K++ A  L ++++  G       Y  +
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    +VG V  A  L    L +  +P+ +     I IL RAGR+E+A  +F +      
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366

Query: 397 VKDISVFGCMIELFSRNKKYANVIEV-FEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
             ++  +  +I+    +K  A+   + FEKM++ G  P S   A++++ + K    E A 
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
            L  EM E+G       +  ++   G  K +     LF+ L  +   +   ++ V+   +
Sbjct: 427 LLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHF 486

Query: 516 ERANRLNDASRIMNRMNK 533
               RL+DA  +   M K
Sbjct: 487 GNCGRLSDAVDLFCEMKK 504



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 35/261 (13%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS F Y +++    +  + E A  L +EM ++G  P    Y +LI   G+   +++A  
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANE 462

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q+++++       +Y+ +I+        S A+ +F  +K  G  PD+  YN +++   
Sbjct: 463 LFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMI 522

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A +  EA  L+  MRE G  PD  S++ +LN   +      A+ +F +M E        
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE------ 576

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                                        I P  VSYNT+L     A +F  A  L R M
Sbjct: 577 -----------------------------IMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607

Query: 256 QRKEIEQNVVTYNTMIKIYGK 276
           + K  E + +TY+++++  GK
Sbjct: 608 KLKGFEYDSITYSSILEAVGK 628



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++ ++ RAK++E A+ LF E+++         Y+ +
Sbjct: 424 KALLLLEEMDEKG-FPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FG  G    A+    +M++   S D+  Y+ L+    +     +A S+   ++ +G 
Sbjct: 483 IKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+ ++N ++N   K    K A  +  +M+E  + PD VSY+T+L+       F  A  
Sbjct: 543 TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAK 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EM       D  T + +++  G++D
Sbjct: 603 LMREMKLKGFEYDSITYSSILEAVGKVD 630



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 52/89 (58%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P + ++N++L  + +    + A  +F +M++  I PD  +Y+T+++C  + GMF+ A  
Sbjct: 543 TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAK 602

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSD 104
            +++M+      D + YS+++E   K+ +
Sbjct: 603 LMREMKLKGFEYDSITYSSILEAVGKVDE 631


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 31/447 (6%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           + +YN VL+ +  AK+W     L DEM +   AP+  T++TLI    + G+F+     L 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     A+
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +KEA  L+ EM ++    D V+++ L++ + +N      + +  +M    C  D+ T  
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+ + +  +  +A  L  SM   G  P+ VSY  +L+    A  + +A  L   M ++
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             L   + + G+  + ++Y ++  A                               L+R 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACA-------------------------------LSRE 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR+ +   +F    D     D  ++  +I    +  +    I+ F  M S G  P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++         + A +L SE+   G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 7/441 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + +  V+R +    +   A  + DEM  +G AP    Y  ++    + G F +++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M     + D    + ++    +     +A+ +  +L   G   D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK + +   L++EM      P+ V+++TL+     N  F     V A+M+E  C  D+  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A+ +   M   G+ P+VV YNT+L+    AE + EA  L   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K+   + VT+N ++  + ++   ++   L+++M + G  P+ ITY+T+I  + K G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A ML + + S G + + V Y  ++      G    A+ L+ ++ Q    PN +   T I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +E+A  + +Q    G   D+  +  +I+   +  K    +E+   M + G  
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 433 PDSHI---IALVLNSYGKLRE 450
           P++ I   IA  L+  G++ +
Sbjct: 529 PNTIIYSSIACALSREGRVNK 549



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN VL+ +  A++W+ A  L  EM Q+    D  T++ L+  F + G+ D  I  
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+QM                                    S G +PD++ Y T+IN F K
Sbjct: 379 LEQM-----------------------------------LSHGCMPDVITYTTVINGFCK 403

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L  EA +L++ M   G KP+TVSY+ +L       ++V+A  + ++M +  CP +  T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L  +M 
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  N + Y+++     +     K   +   +++  I  +A+ Y+ +I+   K  + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           RA   F  + S+G   +   Y  +I      GL   A+ LL EL
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 190/455 (41%), Gaps = 41/455 (9%)

Query: 124 LVAYNTMINVFGKA---------------------------KLFKEARL-----LIEEMR 151
           +VAYN M+  + +A                            L    R+     +++EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            +G  P    Y  +L     +  F  ++ V   M+   C LD   CN++++   +     
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A  L   +   G +  +VSYN +L+    A+ +G+   L   M R +   N+VT+NT+I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               ++   E+   ++ +M   G  P+   Y+TII    K G L+ A  +  ++ S G++
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
            + V Y T++           A+ LL E+ Q +    +    IL     + G ++    +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q    G + D+  +  +I  F +       + + + M S G  P++    +VL     
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSDSNINKK 505
              +  A++L S+M ++GC   + V F  L  +  +K      +E L + L +  + +  
Sbjct: 439 AGRWVDAEELMSQMIQQGCP-PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM-NKRRTFNS 539
               V+ G+  +A +  +A  ++N M NK  + N+
Sbjct: 498 SYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNT 531


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 31/447 (6%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           + +YN VL+ +  AK+W     L DEM +   AP+  T++TLI    + G+F+     L 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     A+
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +KEA  L+ EM ++    D V+++ L++ + +N      + +  +M    C  D+ T  
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+ + +  +  +A  L  SM   G  P+ VSY  +L+    A  + +A  L   M ++
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             L   + + G+  + ++Y ++  A                               L+R 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACA-------------------------------LSRE 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR+ +   +F    D     D  ++  +I    +  +    I+ F  M S G  P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++         + A +L SE+   G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 7/441 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + +  V+R +    +   A  + DEM  +G AP    Y  ++    + G F +++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M     + D    + ++    +     +A+ +  +L   G   D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK + +   L++EM      P+ V+++TL+     N  F     V A+M+E  C  D+  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A+ +   M   G+ P+VV YNT+L+    AE + EA  L   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K+   + VT+N ++  + ++   ++   L+++M + G  P+ ITY+T+I  + K G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A ML + + S G + + V Y  ++      G    A+ L+ ++ Q    PN +   T I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +E+A  + +Q    G   D+  +  +I+   +  K    +E+   M + G  
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 433 PDSHI---IALVLNSYGKLRE 450
           P++ I   IA  L+  G++ +
Sbjct: 529 PNTIIYSSIACALSREGRVNK 549



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN VL+ +  A++W+ A  L  EM Q+    D  T++ L+  F + G+ D  I  
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+QM                                    S G +PD++ Y T+IN F K
Sbjct: 379 LEQM-----------------------------------LSHGCMPDVITYTTVINGFCK 403

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L  EA +L++ M   G KP+TVSY+ +L       ++V+A  + ++M +  CP +  T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L  +M 
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  N + Y+++     +     K   +   +++  I  +A+ Y+ +I+   K  + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           RA   F  + S+G   +   Y  +I      GL   A+ LL EL
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 190/455 (41%), Gaps = 41/455 (9%)

Query: 124 LVAYNTMINVFGKA---------------------------KLFKEARL-----LIEEMR 151
           +VAYN M+  + +A                            L    R+     +++EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            +G  P    Y  +L     +  F  ++ V   M+   C LD   CN++++   +     
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A  L   +   G +  +VSYN +L+    A+ +G+   L   M R +   N+VT+NT+I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               ++   E+   ++ +M   G  P+   Y+TII    K G L+ A  +  ++ S G++
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
            + V Y T++           A+ LL E+ Q +    +    IL     + G ++    +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q    G + D+  +  +I  F +       + + + M S G  P++    +VL     
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSDSNINKK 505
              +  A++L S+M ++GC   + V F  L  +  +K      +E L + L +  + +  
Sbjct: 439 AGRWVDAEELMSQMIQQGCP-PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM-NKRRTFNS 539
               V+ G+  +A +  +A  ++N M NK  + N+
Sbjct: 498 SYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNT 531


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 31/447 (6%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           + +YN VL+ +  AK+W     L DEM +   AP+  T++TLI    + G+F+     L 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +   + D+ +Y+ +I+   K      A  I +R+ S G+ P++V YNT++     A+
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +KEA  L+ EM ++    D V+++ L++ + +N      + +  +M    C  D+ T  
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I+ + +  +  +A  L  SM   G  P+ VSY  +L+    A  + +A  L   M ++
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N VT+NT+I    K    E+A  L+++M   G  P+ I+YST+I   GKAGK + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             L   + + G+  + ++Y ++  A                               L+R 
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACA-------------------------------LSRE 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR+ +   +F    D     D  ++  +I    +  +    I+ F  M S G  P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++         + A +L SE+   G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 207/441 (46%), Gaps = 7/441 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + +  V+R +    +   A  + DEM  +G AP    Y  ++    + G F +++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M     + D    + ++    +     +A+ +  +L   G   D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           AK + +   L++EM      P+ V+++TL+     N  F     V A+M+E  C  D+  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A+ +   M   G+ P+VV YNT+L+    AE + EA  L   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K+   + VT+N ++  + ++   ++   L+++M + G  P+ ITY+T+I  + K G +D
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A ML + + S G + + V Y  ++      G    A+ L+ ++ Q    PN +   T I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G +E+A  + +Q    G   D+  +  +I+   +  K    +E+   M + G  
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 433 PDSHI---IALVLNSYGKLRE 450
           P++ I   IA  L+  G++ +
Sbjct: 529 PNTIIYSSIACALSREGRVNK 549



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN VL+ +  A++W+ A  L  EM Q+    D  T++ L+  F + G+ D  I  
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+QM                                    S G +PD++ Y T+IN F K
Sbjct: 379 LEQM-----------------------------------LSHGCMPDVITYTTVINGFCK 403

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L  EA +L++ M   G KP+TVSY+ +L       ++V+A  + ++M +  CP +  T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   +  + + A  L   M   G  P ++SY+T++   G+A    EA+ L  +M 
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  N + Y+++     +     K   +   +++  I  +A+ Y+ +I+   K  + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           RA   F  + S+G   +   Y  +I      GL   A+ LL EL
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 190/455 (41%), Gaps = 41/455 (9%)

Query: 124 LVAYNTMINVFGKA---------------------------KLFKEARL-----LIEEMR 151
           +VAYN M+  + +A                            L    R+     +++EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
            +G  P    Y  +L     +  F  ++ V   M+   C LD   CN++++   +     
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A  L   +   G +  +VSYN +L+    A+ +G+   L   M R +   N+VT+NT+I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               ++   E+   ++ +M   G  P+   Y+TII    K G L+ A  +  ++ S G++
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWV 387
            + V Y T++           A+ LL E+ Q +    +    IL     + G ++    +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q    G + D+  +  +I  F +       + + + M S G  P++    +VL     
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSDSNINKK 505
              +  A++L S+M ++GC   + V F  L  +  +K      +E L + L +  + +  
Sbjct: 439 AGRWVDAEELMSQMIQQGCP-PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM-NKRRTFNS 539
               V+ G+  +A +  +A  ++N M NK  + N+
Sbjct: 498 SYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNT 531


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 237/501 (47%), Gaps = 38/501 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++   DW  E+  Y   V +YN +L  ++++        ++ ++   G +P+  T+  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G    A+ +L+ +++  V+ D+ +++ LI    K  +  +A+ +F  ++SS + 
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK--PDTVSYSTLLNLYVENHKFVEAL 179
           P++V YNT+I+   K+   ++AR L+EEM  +G K  PD V+Y+TL+N +    +  EA 
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 180 SVFAEMNEVNCPLDLTTCNIMI-------DVYGQLDM-------AKDADRLFWS------ 219
           +   +M       D+ TCNI++       DV   L++           D + ++      
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 220 ------------MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                       ++ M   P +V++NTLL  + +A +   A+ +   M R+ I  +V+TY
Sbjct: 250 CVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
             ++    +  + + A  L++E+  +G  P+ I Y++++    K+G+++ A  L +++  
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEE 383
            G     V+Y +++  Y R G V  A+ +L E+   N +P      I    L + G I +
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +       G V D+  +  +I+   +  +     ++ ++M S G FP+   +  V+ 
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVF 489

Query: 444 SYGKLREFETADDLYSEMQEE 464
              ++   + A  L  EM  +
Sbjct: 490 GLCRVGRVDDAWSLVVEMSRK 510



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 210/461 (45%), Gaps = 9/461 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEG 68
           E +R  P +  YN V+  + ++   E A  L +EM ++G   APD  TY+TLI  F +  
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A ++ ++M+   ++ D++  + L+    K  D  +A+ I   +K +G VPD++ YN
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+    A    EA  +++ M      PD V+++TLL+ + +      AL V  EM   
Sbjct: 244 SIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           N   D+ T  I+++   ++   + A  L   + + G  P V++Y +L+    ++    EA
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L + M  +     VV Y++++  Y ++    KA  ++ EM +  + P   TY+ ++  
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             K G + +A  L   L + G   D V Y T+I    +   V  A  L  E+      PN
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPN 480

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   + +  L R GR+++A  +  +        ++ V+  +I+   ++ +  +   V +
Sbjct: 481 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLD 540

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            MR  G   D      ++ S         A  +Y EM   G
Sbjct: 541 AMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARG 581



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 176/421 (41%), Gaps = 47/421 (11%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P V   N+++  + +    E A  + D M+  G  PD  TY+++I      G    
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L+ M     S DLV ++ L++   K     +A+ +   +    I+PD++ Y  ++N
Sbjct: 258 AAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +    + A  L+EE+  QG  PD ++Y++L++   ++ +  EA  +  EM+   C  
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRT 374

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            +   + ++  Y +      A  +   M  + + P + +YN +L    +     +A+ L 
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 434

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT----------- 301
             +  +    +VVTYNT+I    K+    +A +L  EM +RG  PN +T           
Sbjct: 435 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRV 494

Query: 302 ------------------------YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                                   Y+++I    K+ ++D A M+   +R  GV +D   Y
Sbjct: 495 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAY 554

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG---------RIEEATWVF 388
           + +IV+    G VA A  +  E+     +P  +    L  A           +EE  W  
Sbjct: 555 RKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWTNLEENAWSD 614

Query: 389 R 389
           R
Sbjct: 615 R 615



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 44/406 (10%)

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           EQD    D+  Y++L+++  K   + +   ++  L  SG  P+LV +  +I    KA   
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A   +  + E  V PD   ++ L++   ++    +A+ +F  M       ++ T N +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 201 IDVYGQLDMAKDADRLFWSM-RKMGID-PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           I    +    + A  L   M RK G   P +V+YNTL+  +  A    EA      M+  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  +V+T N ++    K  + E+A  ++  M+  G  P+ ITY++II     AGK+  A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL--- 375
           A + + +  S    D V + T++  + + G++  A  +L E+ + N +P     TIL   
Sbjct: 259 AEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315

Query: 376 -ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             R G+++ A ++                                    E++   GY PD
Sbjct: 316 LCRVGQVQVAFYLL-----------------------------------EEIVRQGYIPD 340

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
                 +++   K  E E A  L  EM   GC     ++  ++S Y
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGY 386


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/485 (23%), Positives = 231/485 (47%), Gaps = 7/485 (1%)

Query: 5   ILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           +L  ++ E R +  P+  +Y  ++R +   ++   A GL   M+  G+ PD  TY TLI 
Sbjct: 78  LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIR 137

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
                   D+A+  L +M +  +  ++V+YS L+    K   +     +F  +   GI P
Sbjct: 138 GLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEP 197

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V Y  +I+   +    K+A  +++ M E+G++P+ V+Y+ L+N   +     EAL + 
Sbjct: 198 DVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLR 257

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK--MGIDPSVVSYNTLLRVYG 240
             M+E     D+ T N +I     +    +A  L   M +    + P ++++N+++    
Sbjct: 258 KNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLC 317

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     +A+ +  +M       N+V +N +I    +  + +KA  LM EM + G++P++ 
Sbjct: 318 KIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSF 377

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYS +I  + K  +++RA     ++R  G+E +PV Y  ++ A    G++  A+ L +E+
Sbjct: 378 TYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM 437

Query: 361 RQPNTIPRETAITILA---RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            +   +      T++    ++G  + A    +   D G + D   +   I +F+++   A
Sbjct: 438 DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLA 497

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               V ++M ++G+ PD  +   ++  YG   + E   +L  EM  +      ++   ++
Sbjct: 498 AAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIV 557

Query: 478 SLYGA 482
           +  GA
Sbjct: 558 TSLGA 562



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 224/509 (44%), Gaps = 50/509 (9%)

Query: 53  DRYTYSTLITCFGKEGMFDSAISWLQQMEQD-RVSG--DLVLYSNLIELARKLSDYSKAI 109
           D  +Y+T++    ++G  D+A+  L+ M  + R++   + + Y+ L+         ++A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +   ++  G+ PD+V Y T+I     A     A  L+ EM E G++P+ V YS LL+ Y
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
            +  ++     VF EM+      D+     +ID   +    K A R+   M + G++P+V
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+YN L+    +     EA+ L + M  K ++ +VVTYNT+I      LE ++A  L++E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 290 MQN--RGIEPNAITYSTIIAIWGKAG---------------------------------- 313
           M      + P+ +T++++I    K G                                  
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 314 -KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            K+ +A  L  ++ SSG++ D   Y  +I  + ++  V  A+  L E+R     P     
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 373 TILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIE--LFSRNKKYANVIEVFEKM 426
             L +A    G + +A  +F +  D     D + +  MI     S  KK A   E  + M
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGAFKSGEKKIAE--EFLKDM 471

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              G  PD+   ++ +N + K  +   A+ +  +M   G V    V   ++  YGA+ D 
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531

Query: 487 -NMLESLFERLDSDSNINKKELHHVVAGI 514
             +LE   E    D  ++ K +  +V  +
Sbjct: 532 EKILELTREMTAKDVALDPKIISTIVTSL 560



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 74/354 (20%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++  ++D + E     P+V  YNV++ ++ +      A  L   M ++G+ PD  TY+TL
Sbjct: 217 KAARVMDMMTERG-LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275

Query: 61  ITCFGKEGMFDSAISWLQQMEQD--RVSGDLVLYSNLIELARKLS--------------- 103
           IT        D A++ L++M Q   RV  DL+ ++++I    K+                
Sbjct: 276 ITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN 335

Query: 104 --------------------DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
                                  KA+ +   + SSG+ PD   Y+ +IN F K +  + A
Sbjct: 336 GCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERA 395

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT-------- 195
              + EMR QG++P+ V Y  LL    +     +A  +F EM+  NC LD          
Sbjct: 396 ESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHG 454

Query: 196 ---------------------------TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
                                      T +I I+++ +      A+R+   M   G  P 
Sbjct: 455 AFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPD 514

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           V  +++L++ YG      + + L R M  K++  +    +T++   G S+E +K
Sbjct: 515 VAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQK 568


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 212/447 (47%), Gaps = 34/447 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLF-DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           F  N +LR +++A++   A+ +F DE+  +    +  TY+TLI  F K G  + A   L 
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLA 129

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M++   S D+V +S++++      + S+A+  F   +S    PD V +N +++   KA 
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKAN 187

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EAR +IEEM E+G+ PD V+Y++L++   ++++  EA  +   M +     +L T N
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I  Y +      A +L   M + G  P VV++N+L+  + +     +A  +  LM++ 
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N+VTYN +I     +    +A  L+ EM  RGI P+ ITY+++I I+ +  ++++A
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQA 367

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             +   +   GV  D + Y T+ VA                               L ++
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVA-------------------------------LLKS 396

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
            R +EA  +    FDAG + ++  F  ++E    +++      +   MR  G  P +   
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++    K    + A ++   M  EG
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEG 483



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 41/414 (9%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
             YN ++    +A   E A  L  EM++RG +PD  T+S+++      G    A+ + + 
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR- 164

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD---------------- 123
            E    + D VL++ L+    K +  S+A  +   +   GIVPD                
Sbjct: 165 -ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 124 -------------------LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
                              LV YNT+I  + K      A  LIE M + G  PD V++++
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++ + +  K  +A  V   M +  C  +L T N++I        A +A  L   M   G
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P +++YN+L+ ++       +A  +  LM  + +  + ++Y T+     KS   ++A 
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF 403

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+  M + G  PN  T+++++     + +LD A  L   +R  G +     Y+ ++   
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGL 463

Query: 345 ERVGLVAHAKRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            + G V  AK +L     E  QP      T +  LAR G+ + A   F Q   A
Sbjct: 464 CKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAA 517



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 161/326 (49%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           + +  E    +P    +N+++  + +A Q   A  + +EM +RGI PD  TY++LI    
Sbjct: 160 MQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC 219

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K    + A   L+ M + +V  +LV Y+ LI    K      A  +  R+  SG  PD+V
Sbjct: 220 KSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVV 279

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +N++I+ F +     +A  ++  M++    P+ V+Y+ L++   +  +  EA  + +EM
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
           +      D+ T N +I ++ +    + A ++   M + G+ P  +SY TL     ++E F
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA  L   M       N+ T+N++++    S   ++A +L+  M+  G +P A TY  +
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVE 331
           +    KAG++D A  +   + S G++
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQ 485



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 6/346 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT+I  F KA   + A  L+ EM+E+G  PD V++S+++           A+  F E
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
              V C  D    NI++    + +   +A ++   M + GI P VV+YN+L+    ++  
Sbjct: 166 --SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA  L   M ++++  N+VTYNT+I  Y K+     A  L++ M   G  P+ +T+++
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I+ + +  K+D+A  +   ++      + V Y  +I      G    A  LL E+    
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P+ I   + I I  R  +IE+A  +     + G + D   +  +     +++++    
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF 403

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            + + M  AG  P+      ++      R  + A  L + M+  GC
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGC 449



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 156/327 (47%), Gaps = 4/327 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + ++ + E A  L + M +R + P+  TY+TLI  + K G    A   
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M Q     D+V +++LI    + S   KA  +   +K     P+LV YN +I+    
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLDLT 195
           A    EA  L+ EM  +G+ PD ++Y++L+ ++  N +  +A  +   M E    P  ++
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            C + + +  + +   +A  L  +M   G  P++ ++N+L+     +    EA HL  +M
Sbjct: 386 YCTLAVALL-KSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +R   +    TY  ++    K+   + A  ++  M + GI+P   +  TI+    + GK 
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504

Query: 316 DRAAMLF-QKLRSSGVEIDPVLYQTMI 341
           D A   F Q + +     DP  YQ ++
Sbjct: 505 DLALHYFDQVVAAESKACDPS-YQKLL 530



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 141/309 (45%), Gaps = 7/309 (2%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           + N LLR   +A    +A  +FR  +  +  + N +TYNT+I  + K+ + E+A  L+ E
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M+ RG  P+ +T+S+I+      G L RA   F++  S     D VL+  ++    +   
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQ 188

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           ++ A++++ E+ +    P+ +   + I  L ++ R+EEA  +           ++  +  
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I  + +        ++ E+M  +G  PD      +++ + +  + + A ++   M++  
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
           C  +   +  ++S        N    L   +D    +     ++ + GI+ R  ++  A 
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 526 RIMNRMNKR 534
           +I N M +R
Sbjct: 369 QIQNLMVER 377


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 209/451 (46%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P     N +++ +    Q + A    D++  +G   ++ +Y+TLI    K G   +AI
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L++++      D+V+Y+ +I+   K    S+A  +FS +   GI  D+V YNT+I  F
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 KEA  L+ EM  + + P+  +Y+ L++   +  K  EA SV A M +     D+
Sbjct: 245 CIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  +   K A  +F +M  MG+ P V +Y  L+  + + ++  EA++LF+ 
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +K +   +VTY+++I    KS       +L+ EM++RG   + ITYS++I    K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           LDRA  LF K++                                E+R PN       +  
Sbjct: 425 LDRAIALFNKMKD------------------------------QEIR-PNIFTFTILLDG 453

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+++A  VF+     G   ++  +  MI    +       + +  KM   G  P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     ++ +  K  E + A+ L  +M   G
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 224/478 (46%), Gaps = 5/478 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R++P +  +N +L +  + K +  A  L   +  +GI PD  T + LI CF   G     
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S L ++ +     D V  + LI+         KA+    +L + G   + V+Y T+IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    + A   + ++  +  KPD V Y+T+++   +     EA  +F+EM       D
Sbjct: 174 VCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISAD 233

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I  +  +   K+A  L   M    I+P+V +YN L+    +     EA  +  
Sbjct: 234 VVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M +  ++ +V+TY+T++  Y    E +KA ++   M   G+ P+  TY+ +I  + K  
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---QP-NTIPRE 369
            +D A  LF+++    +    V Y ++I    + G +++   L+ E+R   QP + I   
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYS 413

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + G ++ A  +F +  D     +I  F  +++   +  +  +  EVF+ + + 
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           GY  + +   +++N + K    E A  + S+M++ GC+  +   F+ + +   +KD N
Sbjct: 474 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI-PNAFTFETIIIALFKKDEN 530



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 156/315 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  V  YN ++       + + A GL +EM  + I P+ YTY+ L+    KEG    A S
Sbjct: 231 SADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M +  V  D++ YS L++    + +  KA  +F+ +   G+ PD+  Y  +IN F 
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  EA  L +EM ++ + P  V+YS+L++   ++ +      +  EM +   P D+ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +ID   +      A  LF  M+   I P++ ++  LL    +     +A  +F+ +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    NV TYN MI  + K    E+A  ++ +M++ G  PNA T+ TII    K  + 
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 316 DRAAMLFQKLRSSGV 330
           D+A  L +++ + G+
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 191/428 (44%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ ++  F K   + +A+S   ++E   +  DL+  + LI     
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +   +   S+ +++   G  PD V  NT+I         K+A    +++  QG + + VS
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+N   +      A+    +++      D+   N +ID   +  +  +A  LF  M 
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA 226

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI   VV+YNTL+  +       EAI L   M  K I  NV TYN ++    K  + +
Sbjct: 227 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +++  M    ++P+ ITYST++  +    ++ +A  +F  +   GV  D   Y  +I
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + +  +V  A  L  E+ Q N +P      + I  L ++GRI     +  +  D G+ 
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQP 406

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +I+   +N      I +F KM+     P+     ++L+   K    + A ++
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466

Query: 458 YSEMQEEG 465
           + ++  +G
Sbjct: 467 FQDLLTKG 474



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 178/396 (44%), Gaps = 39/396 (9%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+S F+R+      P ++ +N +++ F K K +  A  L   +  +G++PD ++ + L+N
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKD-ADRLFW----- 218
            +    +     SV A++ +   P D  T N +I    + GQ+  A    D+L       
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162

Query: 219 ----------SMRKMG-----------ID-----PSVVSYNTLLRVYGEAELFGEAIHLF 252
                      + K+G           ID     P VV YNT++    + +L  EA  LF
Sbjct: 163 NQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLF 222

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K I  +VVTYNT+I  +    + ++A  L+ EM  + I PN  TY+ ++    K 
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK+  A  +   +  + V+ D + Y T++  Y  V  V  A+ + + +      P     
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           TIL     +   ++EA  +F++      V  I  +  +I+   ++ + + V ++ ++MR 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            G   D    + +++   K    + A  L+++M+++
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 111/225 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P V  Y+ ++       + + A  +F+ M   G+ PD +TY+ LI  F K  M D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++  ++M Q  +   +V YS+LI+   K    S    +   ++  G   D++ Y+++I
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L  +M++Q ++P+  +++ LL+   +  +  +A  VF ++      
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           L++ T N+MI+ + +  + ++A  +   M   G  P+  ++ T++
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/121 (19%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+ + + ++    P++F + ++L  + +  + + A  +F ++  +G   + YTY+ +
Sbjct: 427 RAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G+ + A++ L +ME +    +   +  +I    K  +  KA  +  ++ + G+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545

Query: 121 V 121
           +
Sbjct: 546 L 546


>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 589

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 193/415 (46%), Gaps = 28/415 (6%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + + +WI   + + P V  +N+++    +  +++ A  L+ ++ +    P   TY+ LI 
Sbjct: 152 ILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIK 211

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIV 121
            +   G+ + A + L +M+   VS  + +Y+  IE L ++  +  +AI +F R+K     
Sbjct: 212 AYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCK 271

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P    YN MIN++GKA     +  L  EMR    KP+  +Y+ L+N +       +A  +
Sbjct: 272 PTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 331

Query: 182 FAEMNE-----------------------VNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           F ++ E                       + C  D  + NIM+D YG+  +  DA+ +F 
Sbjct: 332 FEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 391

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M+++GI P++ S+  LL  Y  A    +   + + M    +E +    N+M+ +YG+  
Sbjct: 392 EMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 451

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           +  K   ++ EM+N     +  TY+ +I I+GKAG L+R   LF +L+    + D V + 
Sbjct: 452 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWT 511

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFR 389
           + I AY R  L      +  E+      P      +L  A     ++E+ T V R
Sbjct: 512 SRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLR 566



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 192/424 (45%), Gaps = 17/424 (4%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           +R+    PD   ++ LI  +G++  F  A S   Q+ + R       Y+ LI+       
Sbjct: 159 LRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGL 218

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL-LIEEMREQGVKPDTVSYS 163
             KA ++   +++  + P +  YN  I    K K   E  + + + M+    KP T +Y+
Sbjct: 219 IEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYN 278

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            ++NLY +  K   +  +F EM    C  ++ T   +++ + +  + + A+ +F  +++ 
Sbjct: 279 LMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 338

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G   S   Y      YG AE+F        LMQ    E +  +YN M+  YG++  H  A
Sbjct: 339 GHIDSRAGYP-----YGAAEIFS-------LMQHMGCEPDRASYNIMVDAYGRAGLHSDA 386

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             + +EM+  GI P   ++  +++ + +A  + +   + +++  +GVE D  +  +M+  
Sbjct: 387 EAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 446

Query: 344 YERVGLVAHAKRLLHELRQ-PNTIPRET---AITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y R+G     +++L E+   P T    T    I I  +AG +E    +F +  +     D
Sbjct: 447 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPD 506

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +   I  +SR K Y   +E+FE+M  +G  PD     ++L++     + E    +  
Sbjct: 507 VVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLR 566

Query: 460 EMQE 463
            M +
Sbjct: 567 TMHK 570



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 13/327 (3%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+   YN+++    +A +  ++  LF EMR     P+  TY+ L+  F +EG+ + A
Sbjct: 269 RCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKA 328

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               +Q+++D   G +         +R    Y  A  IFS ++  G  PD  +YN M++ 
Sbjct: 329 EEIFEQLQED---GHID--------SRAGYPYGAA-EIFSLMQHMGCEPDRASYNIMVDA 376

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +G+A L  +A  + EEM+  G+ P   S+  LL+ Y       +  ++  EM+E     D
Sbjct: 377 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPD 436

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N M+++YG+L      +++   M        + +YN L+ +YG+A        LF 
Sbjct: 437 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 496

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            ++ +  + +VVT+ + I  Y +   + K   + +EM + G  P+  T   +++      
Sbjct: 497 ELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSED 556

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++++   + + +   GV +  ++   M
Sbjct: 557 QVEQVTSVLRTMH-KGVSVSSLVPNLM 582



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 160/351 (45%), Gaps = 10/351 (2%)

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+   N++ID YGQ    K+A+ L+  + +    P+  +Y  L++ Y  A L  +A  + 
Sbjct: 167 DVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVL 226

Query: 253 RLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             MQ   +  +V  YN  I+ +  +    E+A ++ Q M+    +P   TY+ +I ++GK
Sbjct: 227 IEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLYGK 286

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A K   +  LF ++RS   + +   Y  ++ A+ R GL   A+ +  +L++   I     
Sbjct: 287 ASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHID---- 342

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
               +RAG    A  +F      G   D + +  M++ + R   +++   VFE+M+  G 
Sbjct: 343 ----SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 398

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P      L+L++Y + R+    + +  EM E G      V   ML+LYG    F  +E 
Sbjct: 399 APTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 458

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
           +   +++         ++++  IY +A  L     +   + K R F   +V
Sbjct: 459 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL-KERNFKPDVV 508


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 222/463 (47%), Gaps = 7/463 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-EQD 83
           V++ + +AK    A  +F +++ R   P   TY+++I    +EG  +       +M  + 
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEG 196

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
               D + YS L+    KL     AI +F  +K++G+ P    Y T++ ++ K+   ++A
Sbjct: 197 DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSG-DEKA 255

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
             L++EM+++G  P   +Y+ L+    ++ +  +A SVF  M +  C  D+   N +I++
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINI 315

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG-EAIHLFRLMQRKEIEQ 262
           +G+    +DA +LF  MR +   P+VV+YNT+++   E++    EA   F  M+   +  
Sbjct: 316 FGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTP 375

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + + A  LF
Sbjct: 376 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 435

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
            +L+ +       +Y  MI    + G  + A  L +E+++    P+       ++ L RA
Sbjct: 436 LELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRA 495

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G IEEA    R   + G   D++    ++   +R  +     E+F KM+ +   PD+   
Sbjct: 496 GMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSY 555

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
             +L S  +   FE A  L  EM   G  +    +  +L   G
Sbjct: 556 NTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVG 598



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 202/443 (45%), Gaps = 7/443 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
           +  P+   YN ++  +++    E  H L+ EM   G   PD  TYS L++ F K G  D 
Sbjct: 161 KCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDY 220

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           AI    +M+ + +     +Y+ L+ +  K  D  KA+ +   +K  G  P +  Y  +I 
Sbjct: 221 AIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIK 279

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GK+   ++A  +   M + G KPD V  + L+N++ +  +  +AL +F +M  + C  
Sbjct: 280 GLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAP 339

Query: 193 DLTTCNIMID-VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           ++ T N +I  ++     A +A   F  M+  G+ PS  +Y+ L+  + +     +A+ L
Sbjct: 340 NVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLL 399

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K        Y ++I   GK+  +E A  L  E++      +A  Y+ +I   GK
Sbjct: 400 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGK 459

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G+   A  LF +++  G   D   Y  ++    R G++  A   L  + +    P   +
Sbjct: 460 CGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNS 519

Query: 372 ITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             I    LAR GR E+AT +F +  D+    D   +  ++   SR+  +    ++  +M 
Sbjct: 520 HNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMG 579

Query: 428 SAGYFPDSHIIALVLNSYGKLRE 450
           S G+  D    + +L + GK+ E
Sbjct: 580 SRGFEYDHITYSSILEAVGKVDE 602



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 38/338 (11%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF Y  +++ + ++ + E A+ +F  M + G  PD    + LI  FGK G  + A+ 
Sbjct: 268 APTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALK 327

Query: 76  WLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              QM   + + ++V Y+ +I+ L    +  S+A S F ++K++G+ P    Y+ +I+ F
Sbjct: 328 LFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGF 387

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K    ++A LL+EEM E+G  P   +Y +L+N   +  ++  A  +F E+ E NC    
Sbjct: 388 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE-NCGRSS 446

Query: 195 TTC-NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                +MI   G+     +A  LF  M+K+G +P V +YN L+     A +  EA    R
Sbjct: 447 ARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALR 506

Query: 254 LMQ----------------------RKE-------------IEQNVVTYNTMIKIYGKSL 278
            M+                      R E             I+ + V+YNT++    +S 
Sbjct: 507 TMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSG 566

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             E+A  LM+EM +RG E + ITYS+I+   GK  + D
Sbjct: 567 MFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDD 604



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 222/500 (44%), Gaps = 16/500 (3%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS----GDLVLYSNLIELARK 101
           ++R    D  TY  LI C    G+F      +Q+M +         DL   S ++++  K
Sbjct: 87  KRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADL---SEVVKILGK 143

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTV 160
               +KA+S+F ++KS    P    YN+MI +  +    ++   L  EM  +G   PDT+
Sbjct: 144 AKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTM 203

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS L++ +V+  +   A+ +F EM              ++ +Y +    K A  L   M
Sbjct: 204 TYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEK-ALGLVQEM 262

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +  G  P+V +Y  L++  G++    +A  +F  M +   + +VV  N +I I+GK+   
Sbjct: 263 KDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRL 322

Query: 281 EKATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           E A  L  +M++    PN +TY+T+I A++        AA  F+K++++GV      Y  
Sbjct: 323 EDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSI 382

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAG 395
           +I  + +   V  A  LL E+ +    P   A    I  L +A R E A  +F +  +  
Sbjct: 383 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENC 442

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
                 ++  MI+   +  + +  +++F +M+  G  PD +    +++   +    E A 
Sbjct: 443 GRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAF 502

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL-HHVVAGI 514
                M+E GC      H  +L+             +F ++  DS I    + ++ + G 
Sbjct: 503 SALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKM-KDSLIKPDAVSYNTILGS 561

Query: 515 YERANRLNDASRIMNRMNKR 534
             R+    +A+++M  M  R
Sbjct: 562 LSRSGMFEEAAKLMREMGSR 581



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 1/271 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           + +P+V  YN V++ +  +K     A   F++M+  G+ P  +TYS LI  F K    + 
Sbjct: 336 KCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEK 395

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L++M++         Y +LI    K   Y  A  +F  LK +        Y  MI 
Sbjct: 396 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIK 455

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GK     EA  L  EM++ G  PD  +Y+ L++  V      EA S    M E  C  
Sbjct: 456 NLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTP 515

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           DL + NI+++   +    + A  +F  M+   I P  VSYNT+L     + +F EA  L 
Sbjct: 516 DLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLM 575

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           R M  +  E + +TY+++++  GK  E ++ 
Sbjct: 576 REMGSRGFEYDHITYSSILEAVGKVDEDDEP 606



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++  + +AK++E A+ LF E+++         Y+ +
Sbjct: 395 KALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I   GK G    A+    +M++   + D+  Y+ L+    +     +A S    ++ +G 
Sbjct: 454 IKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGC 513

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PDL ++N ++N   +    ++A  +  +M++  +KPD VSY+T+L     +  F EA  
Sbjct: 514 TPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAK 573

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EM       D  T + +++  G++D
Sbjct: 574 LMREMGSRGFEYDHITYSSILEAVGKVD 601



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 51/94 (54%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P + ++N++L  + R  + E A  +F +M+   I PD  +Y+T++    + GMF
Sbjct: 509 EENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMF 568

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           + A   +++M       D + YS+++E   K+ +
Sbjct: 569 EEAAKLMREMGSRGFEYDHITYSSILEAVGKVDE 602


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 223/469 (47%), Gaps = 6/469 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D + +  R  PS+ + N +L N+++  +   A  ++D+MR+  I PD +T + ++
Sbjct: 15  ALHVFDNMGKYGR-KPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMV 73

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + K G  + A+ ++++ME+     + V Y++L++    L D   A  +   +   G++
Sbjct: 74  NAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVM 133

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            + V    +I  + K    +EA  ++ EM +E GV  D  +Y  L++ Y +  K  +A+ 
Sbjct: 134 RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIR 193

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V  EM +V   ++L  CN +I+ Y +     + +RL   MRK+ + P   SY TL+  Y 
Sbjct: 194 VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
              L  +A ++   M RK IE  VVTYNT++K   +  +++ A  L   M  RG+ PN +
Sbjct: 254 RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEV 313

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            Y T++    K G   RA  L+  + + G+      + TMI    ++G +  AK     +
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +    P+ I   T      + G +EEA  +  +         I ++  +I     +KK 
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKI 433

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + +I++  +M + G  P+      ++  +      + A   Y EM  +G
Sbjct: 434 SKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG 482



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 39/487 (8%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F  N ++    +  Q      L   MR+  + PD Y+Y TL+  + ++G+   A +  
Sbjct: 206 NLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVC 265

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            QM +  +   +V Y+ L++   +  DY  A+ ++  +   G+ P+ V Y T+++   K 
Sbjct: 266 DQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKM 325

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             F  A  L +++  +G+     +++T++N   +  +   A   F  M E+ C  D  T 
Sbjct: 326 GDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             + D Y ++   ++A ++   M K  I PS+  YN+L+     ++   + I L   M  
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  NVVTY  +I  +      +KA +   EM  +G  PN I  S I++   + G++D 
Sbjct: 446 RGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDE 505

Query: 318 AAMLFQKLRSSGVEID-----------------------------------PVLYQTMIV 342
           A ML QK+    + +D                                    V+Y   + 
Sbjct: 506 ANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMA 565

Query: 343 AYERVGLVAHAKR----LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              + G V  A+R    L H    P+     T I   + AG + EA  +  +  + G V 
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           +I+ +  ++    ++        +F+K+   G  P+     ++++ Y K      A DL 
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 459 SEMQEEG 465
            +M +EG
Sbjct: 686 GKMLKEG 692



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 204/456 (44%), Gaps = 40/456 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+  +  +  +YN ++   +     E A G+   M ++G+  ++ T + LI  + K+   
Sbjct: 93  EKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKV 152

Query: 71  DSAISWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           + A   L++ME +D V  D   Y  LI+   K+     AI +   +   G+  +L   N+
Sbjct: 153 EEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNS 212

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN + K     E   L+  MR+  +KPD+ SY TL++ Y  +    +A +V  +M    
Sbjct: 213 LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQM---- 268

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                                         +RK GI+P+VV+YNTLL+       + +A+
Sbjct: 269 ------------------------------LRK-GIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L+ LM ++ +  N V Y T++    K  +  +A  L  ++  RGI  +   ++T+I   
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            K G++D A   F+++   G + D + Y+T+   Y +VG V  A ++  ++ +    P  
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSI 417

Query: 369 ---ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               + I  L  + +I +   +  +    G   ++  +G +I  +    +       + +
Sbjct: 418 EMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE 477

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           M   G+ P+  I + +++S  +L   + A+ L  +M
Sbjct: 478 MIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 199/486 (40%), Gaps = 76/486 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN +L+ + R   ++ A  L+  M QRG+ P+   Y TL+     +G+F      
Sbjct: 275 PTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLL-----DGLF------ 323

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                                   K+ D+S+A++++  + + GI   + A+NTMIN   K
Sbjct: 324 ------------------------KMGDFSRALTLWDDILARGINKSIYAFNTMINGLCK 359

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A+   + M E G KPD ++Y TL + Y +     EA  +  +M +      +  
Sbjct: 360 MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419

Query: 197 CN-IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N +++ ++    ++K  D L   M   G+ P+VV+Y  L+  + +     +A   +  M
Sbjct: 420 YNSLIVGLFTSKKISKLID-LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM 478

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM---------------QNRGIE---- 296
             K    NV+  + ++    +    ++A  L+Q+M               QN  I     
Sbjct: 479 IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDC 538

Query: 297 ----------------PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                           PN + Y+  +A   K+GK++ A   F  L       D   Y T+
Sbjct: 539 WKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTL 598

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  +   G V  A  L  E+     +P  T     +  L ++G ++ A  +F +    G 
Sbjct: 599 IHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGL 658

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + ++  +  +I+ + ++      +++  KM   G  P     + ++N + K  + E A  
Sbjct: 659 IPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMK 718

Query: 457 LYSEMQ 462
           L +EM+
Sbjct: 719 LLNEMK 724



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 175/381 (45%), Gaps = 12/381 (3%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++ V+ +  + K A  + + M + G KP   S ++LL+  V+  +   A+ V+ +M  ++
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ TC IM++ Y +    + A      M K+G + + VSYN+L+  Y        A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAI 308
            + + M  K + +N VT   +IK Y K  + E+A  +++EM+   G+  +   Y  +I  
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
           + K GK+  A  +  ++   G++++  +  ++I  Y + G V   +RLL  +R    +P+
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           +    T +    R G   +A  V  Q    G    +  +  +++   R   Y + + ++ 
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC-----VFSDQVH--FQML 477
            M   G  P+      +L+   K+ +F  A  L+ ++   G       F+  ++   +M 
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 478 SLYGARKDFNMLESLFERLDS 498
            + GA++ F  +E L  + D 
Sbjct: 362 EMDGAKETFKRMEELGCKPDG 382



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 38/401 (9%)

Query: 2   SVAILDWINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           S A+  W +  AR  + S++A+N ++  + +  + + A   F  M + G  PD  TY TL
Sbjct: 329 SRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTL 388

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
              + K G  + A    ++ME++ +   + +Y++LI         SK I + + + + G+
Sbjct: 389 SDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGL 448

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LY---------- 169
            P++V Y  +I  +       +A     EM  +G  P+ +  S +++ LY          
Sbjct: 449 SPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANM 508

Query: 170 ----------VENHKFVEALSVFAEMNEVNC-----PLDLTTC----------NIMIDVY 204
                     V +H+ +E     A++ +++C      LD +            NI +   
Sbjct: 509 LLQKMVDFDLVLDHRCLEDFQN-ADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGL 567

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +     DA R F  +      P   +Y TL+  +  A    EA +L   M  K +  N+
Sbjct: 568 CKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNI 627

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            TYN ++    KS   ++A  L  ++  +G+ PN +TY+ +I  + K+G    A  L  K
Sbjct: 628 TTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGK 687

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           +   G+    + Y ++I  + +   V  A +LL+E++  N 
Sbjct: 688 MLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 160/379 (42%), Gaps = 50/379 (13%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  YN ++  +  +K+      L  EM  RG++P+  TY  LI  +  +G  D A S 
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 77  LQQMEQDRVSGDLVLYSNLIE-------------LARKLSDYSKAIS------------- 110
             +M     + ++++ S ++              L +K+ D+   +              
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 111 ------IFSRLKSSGI---VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 I   L  S I   +P+ V YN  +    K+    +AR     +      PD  +
Sbjct: 535 KLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFT 594

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL++ +       EA ++  EM       ++TT N +++   +      A RLF  + 
Sbjct: 595 YCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P+VV+YN L+  Y ++    EA+ L   M ++ I  +++TY+++I  + K  + E
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVE 714

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L+ EM+   ++    T+S ++    + G + + +                L+  M 
Sbjct: 715 EAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK---------------LHNMMH 759

Query: 342 VAYERVGLVAHAKRLLHEL 360
           +A    G+ +H +  L EL
Sbjct: 760 MACPSAGITSHKQMELSEL 778



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 123/253 (48%), Gaps = 7/253 (2%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQR 257
           +++ VY +  M K+A  +F +M K G  PS+ S N+LL  +    E +  A+ ++  M+R
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESY-SAVLVYDQMRR 59

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
            +I  +V T   M+  Y K+ + E+A   ++EM+  G E NA++Y++++  +   G ++ 
Sbjct: 60  LDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEG 119

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETAITIL- 375
           A  + + +   GV  + V    +I  Y +   V  A+++L E+ ++   +  E A   L 
Sbjct: 120 AKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALI 179

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               + G++ +A  V  +    G   ++ V   +I  + +N +      +   MR     
Sbjct: 180 DGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLK 239

Query: 433 PDSHIIALVLNSY 445
           PDS+    +++ Y
Sbjct: 240 PDSYSYCTLVDGY 252


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 232/499 (46%), Gaps = 47/499 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P  F+YNVV+  + R+ +   A  +FDEM  RG+AP++ TY+T+I    K G  +
Sbjct: 188 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLE 247

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN--- 128
           +      QM QD    ++V Y+ L+    +     +  ++   + S  ++PD   Y+   
Sbjct: 248 AGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILF 307

Query: 129 ----------TMINVFGKA-----------------KLFKEARL-----LIEEMREQGVK 156
                     TM+++FG++                  L K+ ++     ++E +   G+ 
Sbjct: 308 DGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 367

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P T  Y+TL+N Y +      A S+F +M   +   D  T N +I+   +++M  +A+ L
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M K G+DPSV ++NTL+  YG A    +   +   MQ K I+ NV+++ +++K + K
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           + +  +A  ++ +M ++ + PNA  Y++II  + ++G  ++A +L +K++SSGV      
Sbjct: 488 NGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFT 547

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    +   +  A+ L++ L     +P+ +   T I+     G  + A  + ++  
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                  +  +  ++       +  ++  +++ M      P S I       YG   E E
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSI-------YGTRCENE 660

Query: 453 T-ADDLYSEMQEEGCVFSD 470
           +    L  EM E+G  F D
Sbjct: 661 SKVASLKKEMSEKGIAFDD 679



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/521 (19%), Positives = 224/521 (42%), Gaps = 41/521 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N++L ++L   +       F  +   G  PD + ++  +      G  D A++ 
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 77  LQQM--EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI--- 131
           L++M   +     D   Y+ +I    +    S A+ +F  +   G+ P+ + YNTMI   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 132 -----------------------NV---------FGKAKLFKEARLLIEEMREQGVKPDT 159
                                  NV           +A    E R L++EM    + PD 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +YS L +           LS+F E  +    +   TC+I+++   +      A+++   
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +   G+ P+   YNTL+  Y +      A  +F  M+ + I  + +TYN +I    K   
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A +L+ EM+  G++P+  T++T+I  +G+AG+L++   +   ++  G++ + + + +
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAG 395
           ++ A+ + G +  A  +L ++   + +P      + I     +G  E+A  +  +   +G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               I  +  +++   +N +     E+   + + G  PD      ++++     + + A 
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRAL 600

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +L  EM +     + + +  +LS  G+    + +E L++ +
Sbjct: 601 ELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHM 641



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 43/286 (15%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E++   PSV  +N ++    RA Q E    +  +M+ +GI  +  ++ +++  F K G  
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++ L  M    V  +  +Y+++I+   +     +A  +  ++KSSG+   +  YN +
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    K     EA  LI  +  QG++PD VSY+T+++                       
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIIS----------------------- 588

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                 CN      G  D A +   L   M K  I P++ +Y+ LL   G A    +   
Sbjct: 589 ----ACCN-----KGDTDRALE---LLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE-KATNLMQEMQNRGI 295
           L++ M  K +E +         IYG   E+E K  +L +EM  +GI
Sbjct: 637 LYQHMVHKNVEPSS-------SIYGTRCENESKVASLKKEMSEKGI 675



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/421 (19%), Positives = 164/421 (38%), Gaps = 76/421 (18%)

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P L + N ++          + R     +   G +PDT +++  +   V      EAL+
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 181 VFAEM--NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           +   M  +E   P D  + N++I    +     DA ++F  M   G+ P+ ++YNT++  
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +         L   M +   + NVVTYN ++    ++   ++   LM EM +  + P+
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 299 AITYS-------------TIIAIWG----------------------KAGKLDRAAMLFQ 323
             TYS             T+++++G                      K GK+ +A  + +
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 324 KLRSSGVEIDPVLYQTMIVAYERV------------------------------GL---- 349
            L  +G+     +Y T+I  Y +V                              GL    
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 350 -VAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +  A+ L+ E+ +    P      T I    RAG++E+   V     D G   ++  FG
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +++ F +N K    + + + M      P++ +   ++++Y +    E A  L  +M+  
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539

Query: 465 G 465
           G
Sbjct: 540 G 540



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/321 (19%), Positives = 128/321 (39%), Gaps = 38/321 (11%)

Query: 183 AEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           A    V  PL  L++CN++++    +    D    F  +   G  P   ++N  ++    
Sbjct: 111 ACAGSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVA 170

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A    EA+ + R M R E                                     P+A +
Sbjct: 171 AGDLDEALAMLRRMGRSE---------------------------------GAPPPDAFS 197

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----L 357
           Y+ +IA   ++GK   A  +F ++   GV  + + Y TMI  + + G +    RL    L
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            + R+PN +     ++ L RAGR++E   +  +      + D   +  + +  +R     
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            ++ +F +    G    ++  +++LN   K  +   A+ +   +   G V +  ++  ++
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 478 SLYGARKDFNMLESLFERLDS 498
           + Y   +D     S+FE++ S
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKS 398


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 215/499 (43%), Gaps = 37/499 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPSV  Y+++L    +A  +  A  L DEMR +G  PD  TY+ LI     EG  D A++
Sbjct: 194 SPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALN 253

Query: 76  WLQQMEQDRVSGDLVLYSNLI-------------ELARKLSD------------------ 104
            L  +       D V Y+ ++             EL  +++                   
Sbjct: 254 ILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLC 313

Query: 105 ----YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
                 +AI +   +   G +PD+V Y+++++         +A  L+  ++  G KPDT+
Sbjct: 314 QQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 373

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T+L       ++  A  + AEM   +CP D  T N +I    Q  +   A ++   M
Sbjct: 374 AYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQM 433

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            + G +P +V+YN+++          +A+ L   +Q    + ++VT+NT++K        
Sbjct: 434 SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E A  LM  M +    P+A T++T+I    + G L +A    + +  +G   +   Y  +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553

Query: 341 IVAYERVGLVAHAKRLLHELRQ--PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           + A  + G    A +LL  +    P+ I   T I+ + +AG++EEA  + R     G   
Sbjct: 554 VDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D   +  +     R       I +  +++  G  PD+     +L  + +    + A D +
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCF 673

Query: 459 SEMQEEGCVFSDQVHFQML 477
           + M   GC+  +  +  +L
Sbjct: 674 AHMVSSGCMPDESTYIILL 692



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 197/450 (43%), Gaps = 7/450 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +V  YN ++    RA + E A  L   M      PD +T++ LI      G    A++
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALA 183

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M     S  +V YS L++   K S Y +A+ +   +++ G  PD+V YN +IN   
Sbjct: 184 VFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 EA  ++ ++   G KPD V+Y+ +L     + ++ E   +FAEM    C  D  
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++    Q  +   A ++   M + G  P +V+Y+++L    +     +A+ L   +
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +    + + + Y T++K      + E A  LM EM      P+ +T++T+IA   + G +
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           DRA  + +++  +G   D V Y ++I        +  A  LL  L+    +P+ +   T 
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +  L    R E+A  +      +    D + F  +I    +       IE  + M   G 
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGC 543

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEM 461
            P+     +V+++  K  + + A  L S M
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGM 573



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 209/475 (44%), Gaps = 7/475 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F +N ++R +    +   A  +FD+M  RG +P   TYS L+    K   +  A+
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M       D+V Y+ LI       D  +A++I S L S G  PD V Y  ++   
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             ++ +KE   L  EM      PD V+++T++    +      A+ V   M+E  C  D+
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDI 337

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D    +    DA  L   ++  G  P  ++Y T+L+     E +  A  L   
Sbjct: 338 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M   +   + VT+NT+I    +    ++A  ++++M   G  P+ +TY++II        
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC 457

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRET 370
           +D A  L   L+S G + D V + T++     V     A++L    +H    P+     T
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNT 517

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            IT L + G + +A    +   + G + + S +  +++   +  K    +++   M +  
Sbjct: 518 VITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG- 576

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
             PD      V+++  K  + E A DL   M   G +  D + ++ L+    R+D
Sbjct: 577 -TPDLITYNTVISNITKAGKMEEALDLLRVMVSNG-LSPDTITYRSLAYGICRED 629



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 195/460 (42%), Gaps = 43/460 (9%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI----------------------- 147
           +F+ L +S  V   V YNTM+N + +A   ++AR LI                       
Sbjct: 120 VFATLGASATV---VTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRG 176

Query: 148 ---------EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
                    ++M  +G  P  V+YS LL+   +   + +A+ +  EM    C  D+ T N
Sbjct: 177 RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN 236

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++I+         +A  +   +   G  P  V+Y  +L+    +E + E   LF  M   
Sbjct: 237 VLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASN 296

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           +   + VT+NT++    +    ++A  ++  M   G  P+ +TYS+I+      G++D A
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDA 356

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITI 374
             L  +L+S G + D + Y T++     +    HA+ L+ E+   +  P E    T I  
Sbjct: 357 VELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIAS 416

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + G ++ A  V  Q  + G   DI  +  +I+     +   + +E+   ++S G  PD
Sbjct: 417 LCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL-- 492
                 +L     +  +E A+ L   M    C   D   F  +     +K   +L+++  
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCP-PDATTFNTVITSLCQKGL-LLQAIET 534

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
            + +  +  I  +  +++V     +A +  +A ++++ M 
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 138/323 (42%), Gaps = 40/323 (12%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------- 242
           PL +  CNI+I          DA+R+F +   +G   +VV+YNT++  Y  A        
Sbjct: 95  PLPVVPCNILIKRLCSGGRVADAERVFAT---LGASATVVTYNTMVNGYCRAGRIEDARR 151

Query: 243 ---------ELF---------------GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                    + F                +A+ +F  M  +    +VVTY+ ++    K+ 
Sbjct: 152 LISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            + +A  L+ EM+ +G EP+ +TY+ +I      G +D A  +   L S G + D V Y 
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDA 394
            ++ +          + L  E+      P E    T +T L + G ++ A  V     + 
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + DI  +  +++      +  + +E+  +++S G  PD+     VL     + ++E A
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHA 391

Query: 455 DDLYSEMQEEGCVFSDQVHFQML 477
           ++L +EM    C   D+V F  +
Sbjct: 392 EELMAEMVCSDCP-PDEVTFNTV 413



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +  YN V+ N+ +A + E A  L   M   G++PD  TY +L     +E   D AI 
Sbjct: 577 TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIR 636

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +++   +S D   Y++++    +      AI  F+ + SSG +PD   Y  ++    
Sbjct: 637 MLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696

Query: 136 KAKLFKEARLLIEEMREQGV 155
              L  EA+ L+  +   GV
Sbjct: 697 YECLLDEAKQLLVNLCSLGV 716



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 21/256 (8%)

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G    L  L+QR+EI+  +   +++    G                 + +    +  + +
Sbjct: 60  GPKRRLRSLIQREEIDDALALVDSIASGGGS---------------GKCLPLPVVPCNIL 104

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPN 364
           I      G++  A  +F  L +S      V Y TM+  Y R G +  A+RL+  +   P+
Sbjct: 105 IKRLCSGGRVADAERVFATLGASATV---VTYNTMVNGYCRAGRIEDARRLISGMPFPPD 161

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T      I  L   GR+ +A  VF      G    +  +  +++   +   Y   + + +
Sbjct: 162 TFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLD 221

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGAR 483
           +MR+ G  PD     +++N+     + + A ++ S++   GC      +  +L SL G+ 
Sbjct: 222 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSE 281

Query: 484 KDFNMLESLFERLDSD 499
           + +  +E LF  + S+
Sbjct: 282 R-WKEVEELFAEMASN 296


>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 503

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 209/422 (49%), Gaps = 12/422 (2%)

Query: 53  DRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
           D  +++ L T  G+  M D A+ +   + +D+    + +Y+ LI      + Y   + ++
Sbjct: 69  DPRSFTILFTFLGRMAMPDQALVFFGMLPKDKQFHSVHVYNTLITCLTNCNRYD--LELY 126

Query: 113 SRLKSSGIVPDLVAYNTMIN--VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
             L    + PD V ++ ++N  V G   L KE   L ++M ++G+ P    + T +  + 
Sbjct: 127 HNLAFYEVFPDSVTFSVLMNSAVKGGGSL-KEVWALYQDMVQRGISPSVSVFGTFIKAFC 185

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
           +  +  EAL +  EM ++N P ++   NI+ID YG++   ++A+ L   MR+ GI P+V 
Sbjct: 186 DAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVG 245

Query: 231 SYNTLLRVYGEAEL---FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +YN L+  Y EA+    F  A  L   M+   +  +VVT+  ++  YG     E+A  + 
Sbjct: 246 TYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVF 305

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M+ RG++PN+ +Y+ +I  + +    ++AA  F+ +R  GV      Y  ++ AY R 
Sbjct: 306 NRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRA 365

Query: 348 GLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G +   + +   ++    +  R T +TIL    + GR +EA  +  +  + G   D+ V+
Sbjct: 366 GDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVY 425

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++  + R  ++    ++  +M++AG+ PDS     ++  + ++R+   A   + EM  
Sbjct: 426 NMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMN 485

Query: 464 EG 465
            G
Sbjct: 486 RG 487



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 187/395 (47%), Gaps = 10/395 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-MFDSAISW 76
           SV  YN ++  +    +++L   L+  +    + PD  T+S L+    K G       + 
Sbjct: 104 SVHVYNTLITCLTNCNRYDLE--LYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWAL 161

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q M Q  +S  + ++   I+         +A+ I + ++   +  ++V YN +I+ +G+
Sbjct: 162 YQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGR 221

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE---NHKFVEALSVFAEMNEVNCPLD 193
               +EA  L+ EMRE+G++P+  +Y+ L+  Y+E     +FV A  +  EM       D
Sbjct: 222 VGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPD 281

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T  +++  YG   + + A+++F  M+  G+ P+  SY  L+  Y E     +A   F 
Sbjct: 282 VVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFE 341

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +++++ +   V TY  ++  Y ++ + E    + + M+  G     +TY TI+  + K G
Sbjct: 342 MIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQG 401

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-TAI 372
           +   A  L ++ ++ G + D ++Y  ++ +Y R G    A  +L E++    +P   T  
Sbjct: 402 RYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYC 461

Query: 373 TILARAGRIEEATWVF---RQAFDAGEVKDISVFG 404
           T++    R+ + T      R+  + G++ D   + 
Sbjct: 462 TLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYA 496



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 8/295 (2%)

Query: 22  YNVVLRNVL-----RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF---GKEGMFDSA 73
           +NVV+ N+L     R  Q E A GL  EMR+RGI P+  TY+ LIT +     +  F  A
Sbjct: 207 FNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVA 266

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              +++ME   +  D+V ++ L+          +A  +F+R+K+ G+ P+  +Y  +IN 
Sbjct: 267 EGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINA 326

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + + +  ++A    E +R+QGV P   +Y+ LL+ Y          +V+  M    C   
Sbjct: 327 YAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVAT 386

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   ++D + +    K+A  L    +  G  P ++ YN LL  Y       +A  +  
Sbjct: 387 RVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILL 446

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            M+      +  TY T+I  + +  +  KA    +EM NRG  P+  TY+ + AI
Sbjct: 447 EMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKLRAI 501



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 152/345 (44%), Gaps = 14/345 (4%)

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  D  +  I+    G++ M   A   F  + K     SV  YNTL+        +   +
Sbjct: 66  CLCDPRSFTILFTFLGRMAMPDQALVFFGMLPKDKQFHSVHVYNTLITCLTNCNRYD--L 123

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            L+  +   E+  + VT++ ++      G SL+   A  L Q+M  RGI P+   + T I
Sbjct: 124 ELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWA--LYQDMVQRGISPSVSVFGTFI 181

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
             +  AG+L  A ++  ++    V  + V+Y  +I AY RVG +  A+ L+ E+R    Q
Sbjct: 182 KAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQ 241

Query: 363 PNTIPRETAITILARAGRIEE---ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           PN       IT    A    +   A  +  +   +G   D+  F  ++  +         
Sbjct: 242 PNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQA 301

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            +VF +M++ G  P+S+    ++N+Y + R  E A   +  ++++G   + + +  +L  
Sbjct: 302 EQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDA 361

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           Y    D  M++++++ +  +  +  +  +  +   +++  R  +A
Sbjct: 362 YRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEA 406



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y  +L    RA   E+   ++  M+  G    R TY T++  F K+G +  A  
Sbjct: 349 NPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARD 408

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++ +      DL++Y+ L+    +   + KA  I   +K++G +PD   Y T+I  F 
Sbjct: 409 LIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFL 468

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           + +   +A     EM  +G  PD  +Y+ L
Sbjct: 469 RVRDQTKALKYHREMMNRGQLPDPKTYAKL 498


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 202/453 (44%), Gaps = 34/453 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V AYN ++     A Q + A     E   R +  D YT  TLI      G   +
Sbjct: 122 AACGPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTAN 178

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++ L +M + R   D+V Y+ L+E   K S Y +A+ +   ++  G  PD+V YN ++N
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A   ++ +   G +P+TVSY+ +L       ++ +A  +  EM +  CP 
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T N++I    +  + + A  +   + K G  P+ +SYN LL  + + +   +A+   
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  +    ++V+YNT++    +S E + A  L+ +++++G  P  I+Y+T+I    KA
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A  L  ++ S G++ D + Y T+                                
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAG----------------------------- 449

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R  RIE+A   F +  D G   +  ++  +I    + ++  + I++F  M   G  
Sbjct: 450 --LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+     +++         + A DL  E+   G
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 182/412 (44%), Gaps = 38/412 (9%)

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR------------- 144
           L +KLS   +       L + G  PD++AYN M+  +  A     AR             
Sbjct: 104 LIKKLSASGRTAEARRVLAACG--PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAY 161

Query: 145 -------------------LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                               +++EM  +   PD V+Y+ LL    +   + +A+ +  EM
Sbjct: 162 TCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 221

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +  C  D+ T N++++   Q     DA     ++   G +P+ VSYN +L+    AE +
Sbjct: 222 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 281

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +A  L   M +K    NVVT+N +I    +    E A  +++++   G  PN+++Y+ +
Sbjct: 282 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPL 341

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           +  + K  K+D+A      + S G   D V Y T++ A  R G V  A  LLH+L+    
Sbjct: 342 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 401

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P  I   T I  L +AG+ +EA  +  +    G   DI  +  +     R  +  + I 
Sbjct: 402 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            F K++  G  P++ +   ++    K RE  +A DL++ M   GC+ ++  +
Sbjct: 462 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 513


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 205/431 (47%), Gaps = 6/431 (1%)

Query: 15  YSPSVFAYNVVLRNV-LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P    +  ++R + +  K  E  H LFD+M   G  PD  TY TLI    K G   +A
Sbjct: 127 HQPDTATFTTLIRGIYVEGKIGEALH-LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  L  M Q     ++  Y+ +I+   K    ++A ++FS + + GI PD+  YN++I+ 
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                 +K    L+ EM +  + PD VS++T+++   +  K  EA  V  +M +     +
Sbjct: 246 LCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPN 305

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T   ++D +  L    +A ++F +M   G  P+V+SYNTL+  Y + +   +A++LF 
Sbjct: 306 VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFG 365

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R+E+  + VTY+T+I         + A  L  EM      PN +TY  ++    K  
Sbjct: 366 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 425

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            L  A  L + +  S ++ D  +    I    R G +  A+ L   L     QP+     
Sbjct: 426 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 485

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I  L R G ++EA+ +FR+  + G   +  ++  +   F RN + +  I++ ++M + 
Sbjct: 486 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 545

Query: 430 GYFPDSHIIAL 440
           G+  D+  + L
Sbjct: 546 GFSADASTMTL 556



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 203/461 (44%), Gaps = 4/461 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + K       L  +M   GI P+ YT   LI  F        A S 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  PD+V Y T+IN   K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M ++  +P+  +Y+T+++   ++ +  EA ++F+EM       D+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I     L   K    L   M    I P VVS+NT++    +     EA  +   M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E NVVTY  ++  +    E ++A  +   M  +G  PN I+Y+T+I  + K  ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF ++    +  D V Y T+I     V  +  A  L HE+    + PN +     +
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   + EA  + +    +    DI V    I+   R  +     ++F  + S G  
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           PD    ++++N   +    + A  L+ EM E GC  +  ++
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 519



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/498 (21%), Positives = 223/498 (44%), Gaps = 6/498 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M +    P    ++ L+T   K     + +S   QM+   +  ++     LI     
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           L+    A S+ +++   G  PD   + T+I  ++ + K+  EA  L ++M  +G +PD V
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKI-GEALHLFDKMIGEGFRPDVV 167

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y TL+N   +      A+ +   M + NC  ++   N +ID   +     +A  LF  M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              GI P + +YN+L+        +     L   M   +I  +VV++NT++    K  + 
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A +++ +M  RG+EPN +TY+ ++       ++D A  +F  +   G   + + Y T+
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 341 IVAYERVGLVAHAKRLLHEL-RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y ++  +  A  L  E+ RQ   P+T+   T I  L    R+++A  +F +     +
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + ++  +  +++   +N+  A  + + + +  +   PD  +  + ++   +  E E A D
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           L+S +  +G       +  M++    R   +    LF  +D +       +++ +   + 
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 527

Query: 517 RANRLNDASRIMNRMNKR 534
           R N  + A +++  M  R
Sbjct: 528 RNNETSRAIQLLQEMVAR 545



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 165/347 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +F YN ++  +    +W+    L +EM    I PD  +++T++    KEG    A  
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            + +M Q  V  ++V Y+ L++    LS+  +A+ +F  +   G +P++++YNT+IN + 
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +   +A  L  EM  Q + PDTV+YSTL++      +  +A+++F EM   +   +L 
Sbjct: 353 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 412

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I++D   +     +A  L  ++    +DP +   N  +     A     A  LF  +
Sbjct: 413 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 472

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K ++ +V TY+ MI    +    ++A+ L +EM   G   N   Y+TI   + +  + 
Sbjct: 473 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 532

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            RA  L Q++ + G   D       +      GL    K++L E  Q
Sbjct: 533 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 13/320 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGM 69
           +++  P V ++N V+  + +  +   AH + D+M QRG+ P+  TY+ L+   C   E  
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE-- 321

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+     M       +++ Y+ LI    K+    KA+ +F  +    ++PD V Y+T
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+     +  ++A  L  EM      P+ V+Y  LL+   +N    EA+++   +   N
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441

Query: 190 CPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              D+   NI ID     G+L+ A+D   LF ++   G+ P V +Y+ ++       L  
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARD---LFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  LFR M       N   YNT+ + + ++ E  +A  L+QEM  RG   +A T +  +
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558

Query: 307 AIWGKAGKLDRAAMLFQKLR 326
            +    G LD++  L Q LR
Sbjct: 559 KMLSDDG-LDQS--LKQILR 575



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L  I E +   P +   N+ +  + RA + E A  LF  +  +G+ PD +TYS +I
Sbjct: 430 AMALLKAI-EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G+ D A    ++M+++  + +  +Y+ +     + ++ S+AI +   + + G  
Sbjct: 489 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 548

Query: 122 PD 123
            D
Sbjct: 549 AD 550


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 243/537 (45%), Gaps = 9/537 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTL 60
           ++ +LD +       P   A+   +  +   ++ E A  LFD+MR+    APD   Y+TL
Sbjct: 72  AMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTL 131

Query: 61  ITCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           I  + K G  D A+   ++++Q+     + V +  L+    K+S  + A+++F  +  +G
Sbjct: 132 IAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAG 191

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           +  D+   NT+I+   +  + ++AR L+  M       D  +Y  L+N +    +  E  
Sbjct: 192 LKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVA 251

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           S         C L     N +I  + +     +A +LF S       P V +YN L+ + 
Sbjct: 252 SFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALC 311

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
              +L  EA+ LF+  ++  +  +V TY+ ++  +GK+    KA  +   MQ  G  P+ 
Sbjct: 312 KSKQL-EEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDT 370

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + Y+ +I+  GK GK+D A  L + +   G+  D   Y  +I      G    A      
Sbjct: 371 VVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGM 430

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +++    P+ +   T +  L +  R +EA  +F +      + D++ FG +I+  ++  +
Sbjct: 431 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 490

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + +E   ++   G+ P+S+I   +++ + +  + +   +L+ +M E  C F D + + 
Sbjct: 491 MEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC-FPDSITYT 549

Query: 476 MLSL-YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +L L +  R   +M   L + +  + +      ++V+      A ++ DA  +   M
Sbjct: 550 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 606



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 197/429 (45%), Gaps = 8/429 (1%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSD 104
           RQ+G+     T +  I  FG+ G  D+A+  L  M +      D V ++  +    ++  
Sbjct: 45  RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104

Query: 105 YSKAISIFSRLK-SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSY 162
             +A+++F  ++ +    PD+VAYNT+I  + KA     A  +   ++++G  KP+ VS+
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            TL+    +  +  +AL+VF EM       D+  CN +I    +L M + A RL   M  
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
                   +Y  L+  +  A    E      L +      + V YN +I+ + +     +
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           AT L +    +   P+  TY+ +IA+  K+ +L+ A  LFQ+    GV +D   Y  ++ 
Sbjct: 285 ATQLFESTMTKESVPDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           A+ + G  A A  + + +++    P+T+     I+ L + G+++EA  +       G + 
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 403

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D   +  +I++ S   +Y      F  M+   + PD      +LN   KLR  + A DL+
Sbjct: 404 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463

Query: 459 SEMQEEGCV 467
            EMQ   C+
Sbjct: 464 DEMQANKCM 472



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 207/469 (44%), Gaps = 5/469 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +   + +E    P+  +++ ++  + +  +   A  +F EM   G+  D    +TL
Sbjct: 143 RALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTL 202

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I C  + GM   A   L  M     + D   Y  L+    +     +  S     +  G 
Sbjct: 203 IHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGC 262

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
               V YN +I  F +     EA  L E    +   PD  +Y+ L+ L  ++ +  EAL+
Sbjct: 263 ALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIAL-CKSKQLEEALT 321

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F E  +    LD+ T + ++D +G+   A  A  +F++M+K G  P  V YN L+   G
Sbjct: 322 LFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLG 381

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     EA+ L   M RK I  +  TYN +I +      +EKA +    M+ R   P+ +
Sbjct: 382 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 441

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRL 356
           TY+T++    K  + D A  LF +++++    D   + T+I    + G +  A     RL
Sbjct: 442 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL 501

Query: 357 LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           +     PN+      I+   R+G++++   +F+   +     D   +  ++  FSR    
Sbjct: 502 VKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHT 561

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +  +E+ ++M   G+ P      +++ S     + E A  L+ EM  +G
Sbjct: 562 SMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 214/471 (45%), Gaps = 8/471 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYST 59
           +++ + D + E    +P V AYN ++    +A   + A  +F  ++Q G   P+  ++ T
Sbjct: 107 QAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDT 166

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           L+    K      A++  Q+M    +  D+ + + LI    +L    +A  +   + +  
Sbjct: 167 LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA 226

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
              D   Y  ++N   +A    E    +E  R  G     V+Y+ ++  ++   +  EA 
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 180 SVF-AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            +F + M + + P D+ T N++I +     + ++A  LF    + G+   V +Y+ L+  
Sbjct: 287 QLFESTMTKESVP-DVFTYNLLIALCKSKQL-EEALTLFQEAEQGGVVLDVFTYSYLMDA 344

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +G+A    +A+ +F  MQ+     + V YN +I   GK  + ++A  L+++M  +GI P+
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ +I +    G+ ++A   F  ++      D V Y T++   +++     A  L  
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 464

Query: 359 ELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E++    +P  T     I  LA+AGR+E+A     +    G   +  ++  +I  F R+ 
Sbjct: 465 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSG 524

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     E+F+ M     FPDS    +++  + +      A +L  EM  EG
Sbjct: 525 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 179/399 (44%), Gaps = 5/399 (1%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F Y +++    RA Q        +  R  G A     Y+ +I  F + G    A    + 
Sbjct: 232 FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFES 291

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
                   D+  Y+ LI L  K     +A+++F   +  G+V D+  Y+ +++ FGKA  
Sbjct: 292 TMTKESVPDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGR 350

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A  +   M++ G  PDTV Y+ L++   +  K  EAL +  +MN      D  T NI
Sbjct: 351 AAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 410

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +IDV       + A   F  M++    P VV+YNTLL    +     EA  LF  MQ  +
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              ++ T+ T+I    K+   E A      +   G  PN+  Y+ +I+ + ++G++D+  
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR-- 377
            LFQ +       D + Y  +++ + R G  + A  LL E+ +    P      +L R  
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 590

Query: 378 --AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
             AG++E+A  +F++    G   D+  +  +  L + NK
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNK 629



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 152/324 (46%), Gaps = 1/324 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF YN+++  + ++KQ E A  LF E  Q G+  D +TYS L+  FGK G    A+  
Sbjct: 299 PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M++     D V+Y+ LI    K     +A+ +   +   GI+PD   YN +I+V   
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +++A      M+ +   PD V+Y+TLLN   +  +  EA  +F EM    C  DLTT
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    +DA      + KMG  P+   YN L+  +  +    +   LF+ M 
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + +TY  ++  + +      A  L+QEM   G  P   TY+ +I     AG+++
Sbjct: 538 ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVE 597

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTM 340
            A  LF+++ + G   D   Y  +
Sbjct: 598 DAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/426 (20%), Positives = 174/426 (40%), Gaps = 41/426 (9%)

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHK 174
           +  G+    V     I  FG+A     A  ++++MR     +PDTV+++  ++   E  +
Sbjct: 45  RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +A+++F +M E        TC+                            P VV+YNT
Sbjct: 105 VEQAMTLFDDMRE--------TCDCA--------------------------PDVVAYNT 130

Query: 235 LLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           L+  Y +A     A+ +FR L Q    + N V+++T++    K      A  + QEM   
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G++ +    +T+I    + G L +A  L   + +     D   Y  ++ A+ R G +   
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250

Query: 354 KRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
              +    H+    + +     I    R GR+ EAT +F        V D+  +  +I L
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIAL 310

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             ++K+    + +F++    G   D    + +++++GK      A +++  MQ+ GC+  
Sbjct: 311 -CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMN 529
             V+  ++S  G +   +    L E ++    +     +++V  +     R   A     
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429

Query: 530 RMNKRR 535
            M +R+
Sbjct: 430 MMKRRK 435



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 129/260 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P    YNV++  + +  + + A  L ++M ++GI PD  TY+ +I      G +
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S+   M++ + S D+V Y+ L+   +KL    +A  +F  ++++  +PDL  + T+
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA   ++A      + + G  P++  Y+ L++ +  + +  +   +F +M E +C
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T  I++  + +      A  L   M + G  P++ +YN L+R    A    +A  
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYT 601

Query: 251 LFRLMQRKEIEQNVVTYNTM 270
           LF+ M  K    ++ TY+ +
Sbjct: 602 LFKEMIAKGFNPDMQTYSAL 621



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 35/194 (18%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMR--------------------------- 46
           ++SP V  YN +L  + + ++ + A  LFDEM+                           
Sbjct: 435 KHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDA 494

Query: 47  --------QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
                   + G AP+ Y Y+ LI+ F + G  D      Q M +     D + Y+ L+  
Sbjct: 495 LEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLG 554

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             +    S A+ +   +   G  P L  YN +I     A   ++A  L +EM  +G  PD
Sbjct: 555 FSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPD 614

Query: 159 TVSYSTLLNLYVEN 172
             +YS L NL   N
Sbjct: 615 MQTYSALPNLSTPN 628


>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 564

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 185/379 (48%), Gaps = 17/379 (4%)

Query: 1   RSVAILD-----WINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPD 53
           R+VA+LD      + E A    SP+V  ++  +     A QWE A GL D+M + G+ P+
Sbjct: 122 RAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVPPN 181

Query: 54  RYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFS 113
            +T+S  ++  GK G +  A++ L++M       ++  Y+  I+   K  ++  A  + +
Sbjct: 182 EFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLA 241

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
            ++  G+ P+++ +N+ I+  G    ++EA  L+ +M   GV+P+  SY+  +    +N+
Sbjct: 242 EMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNN 301

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           ++  AL+V  +M       D  +    ID   Q    + A  L   MR  GI P+V S++
Sbjct: 302 RWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFS 361

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           T +   G+ + +G A+ L R M+   +  N V++N  I   G++ +   A +L+ +M + 
Sbjct: 362 TAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSA 421

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP----------VLYQTMIVA 343
           G+    ITY+ +IA  GK  +  RA  + +++ +   + D           V Y   I A
Sbjct: 422 GVPRGTITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDA 481

Query: 344 YERVGLVAHAKRLLHELRQ 362
             R G    A  L+  LR+
Sbjct: 482 CVRAGEWEEAISLVELLRR 500



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 188/412 (45%), Gaps = 31/412 (7%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V+ Y+V++  V R+ +WE    L D MR  G+APD + +   +    K G ++ A++ L 
Sbjct: 69  VYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGGQWERAVALLD 128

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           Q                           +A+ +   + + G+ P++  +++ +   G A 
Sbjct: 129 Q---------------------------RALRLLGEMAAVGLSPNVTTFSSAVAACGNAG 161

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            ++ A  L+++M E+GV P+  ++S  ++   +  ++  AL++   M   NCP ++ T  
Sbjct: 162 QWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYT 221

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             ID  G+    + A  L   MR+ G+ P+V+++N+ +   G    + EA++L R M   
Sbjct: 222 AAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSM 281

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            ++ N+ +Y   +   G +    +A  + ++M++RGI  + ++++  I    + G  + A
Sbjct: 282 GVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMA 341

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
             L  ++R  G+      + T I A  +      A  LL E+ +    PN +    AI  
Sbjct: 342 LALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDA 401

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             RAG+   A  +  +   AG  +    +  +I    + K++A  + V  +M
Sbjct: 402 CGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWARAVSVLREM 453



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 184/402 (45%), Gaps = 23/402 (5%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFD--------EMRQRGIAPDRYT 56
           +LD +  E   +P  FA+   +    +  QWE A  L D        EM   G++P+  T
Sbjct: 91  LLDVMRSEG-VAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTT 149

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           +S+ +   G  G ++ A+  L QM ++ V  +   +S  +    K   +  A++I  R++
Sbjct: 150 FSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMR 209

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           ++   P++  Y   I+  GKA  ++ A+ L+ EMRE+GV P+ +++++ ++      ++ 
Sbjct: 210 AANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQ 269

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EAL++  +M  +    ++ +    +   G  +    A  +   MR  GI    VS+   +
Sbjct: 270 EALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAI 329

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +   +  A+ L   M+ + I   V +++T I   GK  +  +A  L++EM+  G+ 
Sbjct: 330 DACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVS 389

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN ++++  I   G+AG+   A  L  K+ S+GV    + Y  +I A  +    A A  +
Sbjct: 390 PNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWARAVSV 449

Query: 357 LHEL--------------RQPNTIPRETAITILARAGRIEEA 384
           L E+                 + +    AI    RAG  EEA
Sbjct: 450 LREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEA 491



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/449 (22%), Positives = 196/449 (43%), Gaps = 47/449 (10%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
            L++  R  QW+ A    +  R+ G+  D YTYS L++   + G ++  +  L  M  + 
Sbjct: 40  TLKSQGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEG 99

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSR--------LKSSGIVPDLVAYNTMINVFGK 136
           V+ D   +   +    K   + +A+++  +        + + G+ P++  +++ +   G 
Sbjct: 100 VAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGN 159

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  ++ A  L+++M E+GV P+  ++S  ++   +  ++  AL++   M   NCP     
Sbjct: 160 AGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCP----- 214

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                                         P+V +Y   +   G+A  +  A  L   M+
Sbjct: 215 ------------------------------PNVQTYTAAIDACGKAGEWRLAQGLLAEMR 244

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  NV+T+N+ I   G   + ++A NL+++M + G++PN  +Y+  +   G   +  
Sbjct: 245 EKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWA 304

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAI 372
           RA  + +++RS G+  D V +   I A  + G    A  LL E+R     P      TAI
Sbjct: 305 RALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAI 364

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +   +  +   A  + R+  + G   +   F   I+   R  ++   + + +KM SAG  
Sbjct: 365 SACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVP 424

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEM 461
             +     V+ + GK +E+  A  +  EM
Sbjct: 425 RGTITYNAVIAACGKGKEWARAVSVLREM 453



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 173/417 (41%), Gaps = 42/417 (10%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L   L    RK   + +A++  +  +  G+V D+  Y+ +++   ++  ++E  +L++ M
Sbjct: 37  LIQTLKSQGRK-GQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVM 95

Query: 151 REQGVKPDTVSYSTLLNLYVENHKF--------VEALSVFAEMNEVNCPLDLTTCNIMID 202
           R +GV PD  ++   +N   +  ++          AL +  EM  V    ++TT +  + 
Sbjct: 96  RSEGVAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVA 155

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
             G     + A  L   M + G+ P+  +++  +   G+A  +  A+ + R M+      
Sbjct: 156 ACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPP 215

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NV TY   I   GK+ E   A  L+ EM+ +G+ PN IT+++ I+  G  G+   A  L 
Sbjct: 216 NVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLL 275

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
           + + S GV                               QPN      A+T      R  
Sbjct: 276 RDMPSMGV-------------------------------QPNMWSYTAAVTACGDNNRWA 304

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  V  Q    G   D   F   I+  ++   +   + + ++MR  G  P     +  +
Sbjct: 305 RALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAI 364

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDS 498
           ++ GK +++  A  L  EM+E G V  ++V F   +   G    +    SL +++ S
Sbjct: 365 SACGKGQQWGRAVALLREMEEVG-VSPNEVSFNAAIDACGRAGQWRAALSLLDKMSS 420


>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Vitis vinifera]
          Length = 1008

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 228/467 (48%), Gaps = 8/467 (1%)

Query: 5   ILDWINEE-ARYSPSVFA-YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           I+D  N + +R  P + A YN ++    +A + + A  +F EM + G+A D  T++T+I 
Sbjct: 329 IMDSSNTDGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIY 388

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             G  G    A + L +ME+  +S D   Y+  + L     +   A+  + +++  G+ P
Sbjct: 389 TCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFP 448

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V +  +++V  +  +  E   +I EM+   V+ D  S   ++ +YV N   ++   +F
Sbjct: 449 DVVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYV-NEGLLDKAKIF 507

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            E + +   L   T   +ID Y +  +  +A+ +F   R +G    VV YN +++ YG+A
Sbjct: 508 LEEHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKA 567

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +L+ +A  LF+ M+      N  TYN++I+++      ++A  ++ EMQ  G +P  +T+
Sbjct: 568 KLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTF 627

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S +IA + + G+L  A  +++++   GV+ + V+Y ++I  +   G V  A     ++ +
Sbjct: 628 SAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDE 687

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
                N I   + I   ++ G +E A  ++    D     DI     MI L++     + 
Sbjct: 688 FGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSE 747

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              +F+ +R  G   D    A ++  Y  L   + A D+  EM++ G
Sbjct: 748 AKLIFDDLRQKGS-ADGVSFATMMYLYKNLGMLDEAIDVADEMKQSG 793



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 131/560 (23%), Positives = 231/560 (41%), Gaps = 100/560 (17%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R + + +WI  +  Y P+V  YNVVLR + RA++W+     + EM + G+ P   TY  L
Sbjct: 166 RVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGML 225

Query: 61  ITCFGK----------------EGMFDSAIS---------------WLQQMEQDRVSGDL 89
           +  +GK                 G+F   ++               W  +  +D   G +
Sbjct: 226 VDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWCVGKV 285

Query: 90  VLY---------------SNLIELARKLSDYSKAISIFSRLKSSGIV-----------PD 123
            L                S  + L   LS  ++   I  R   S I+           P 
Sbjct: 286 ELGDFDLESVADSDDEIGSAPVSLKHFLS--TELFKIGGRRPISNIMDSSNTDGSRRKPR 343

Query: 124 LVA-YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           L A YNT+I+++GKA   K+A  +  EM + GV  DT++++T++     +    EA ++ 
Sbjct: 344 LTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLL 403

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM E     D  T NI + +Y        A + +  +R++G+ P VV++  +L V  E 
Sbjct: 404 TEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCER 463

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY---------------------------- 274
            + GE   +   M+R  +  +  +   +IK+Y                            
Sbjct: 464 NMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRV 523

Query: 275 -------GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
                   K L  E A N+    ++ G + + + Y+ ++  +GKA   D+A  LF+ +R+
Sbjct: 524 AIIDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRN 582

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
            G   +   Y ++I  +    LV  A+ +L E++    +P  +     I   AR GR+ +
Sbjct: 583 HGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPD 642

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  V+ +    G   +  V+G +I  FS        +  F KM   G   +  ++  ++ 
Sbjct: 643 AVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIK 702

Query: 444 SYGKLREFETADDLYSEMQE 463
           +Y K+   E A  LY  M++
Sbjct: 703 AYSKVGCLEGAKTLYEGMKD 722



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/594 (21%), Positives = 237/594 (39%), Gaps = 76/594 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   SP    YN+ L         + A   + ++R+ G+ PD  T+  ++    +  M 
Sbjct: 407 EERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMV 466

Query: 71  DSAISWLQQMEQDRVSGD-------LVLYSN---------------------------LI 96
               + + +M++ RV  D       + +Y N                           +I
Sbjct: 467 GEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVAII 526

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +   +   +++A ++F   +  G   D+V YN M+  +GKAKL+ +A  L + MR  G  
Sbjct: 527 DAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTW 586

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+  +Y++L+ ++       EA  + AEM ++       T + +I  Y +L    DA  +
Sbjct: 587 PNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGV 646

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           +  M ++G+ P+ V Y +L+  + E     EA+  FR M    I  N +   ++IK Y K
Sbjct: 647 YEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSK 706

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
               E A  L + M++    P+ +  +++I ++   G +  A ++F  LR  G   D V 
Sbjct: 707 VGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKG-SADGVS 765

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ---------------------------------- 362
           + TM+  Y+ +G++  A  +  E++Q                                  
Sbjct: 766 FATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEMI 825

Query: 363 -----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P+T   +   T+L + G   EA      ++  G  K  +    +  +FS    +A
Sbjct: 826 SRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEG--KPYARQAVITSVFSTVGLHA 883

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +E  E   +A    DS    + + +YG     + A  ++ +MQ+EG       +  + 
Sbjct: 884 FALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLA 943

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             YG       L+ ++ +L        + L   +   Y  A R + A  +   M
Sbjct: 944 GCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEM 997



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 178/410 (43%), Gaps = 59/410 (14%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +  +G++P    Y  +++V+GKA L KEA L I+ M+ +GV PD V+ +T++ +  +  +
Sbjct: 210 MAKNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGE 269

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR--KMG-------- 224
           F  A   + +       L       + D   ++  A  + + F S    K+G        
Sbjct: 270 FDWADRFYRDWCVGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNI 329

Query: 225 IDPS-----------VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           +D S             +YNTL+ +YG+A    +A  +F  M +  +  + +T+NTMI  
Sbjct: 330 MDSSNTDGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYT 389

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G      +A  L+ EM+ RGI P+  TY+  ++++   G +D A   ++K+R  G+  D
Sbjct: 390 CGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPD 449

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQP------NTIP-------------------- 367
            V ++ ++       +V   + ++ E+++       ++IP                    
Sbjct: 450 VVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLE 509

Query: 368 ------------RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
                       R   I   A  G   EA  VF    D G+ KD+  +  M++ + + K 
Sbjct: 510 EHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKL 569

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           Y     +F+ MR+ G +P+      ++  +      + A  + +EMQ+ G
Sbjct: 570 YDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMG 619



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 65/374 (17%)

Query: 100 RKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           ++ S + + + +F  +KS    VP+++ YN ++ V G+A+ + E RL   EM + GV P 
Sbjct: 159 KEQSSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPT 218

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             +Y                                    +++DVYG+  + K+A  L W
Sbjct: 219 NNTY-----------------------------------GMLVDVYGKAGLVKEA--LLW 241

Query: 219 --SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE------QNVVTYNTM 270
              M+  G+ P  V+ NT++RV  +A  F  A   +R     ++E      ++V   +  
Sbjct: 242 IKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWCVGKVELGDFDLESVADSDDE 301

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGI--------------EPN-AITYSTIIAIWGKAGKL 315
           I     SL+H  +T L +    R I              +P    TY+T+I ++GKAG+L
Sbjct: 302 IGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRRKPRLTATYNTLIDLYGKAGRL 361

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             AA +F ++   GV +D + + TMI      G ++ A+ LL E+ +    P+T      
Sbjct: 362 KDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIF 421

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +++ A  G I+ A   +R+  + G   D+     ++ +         V  V  +M+ +  
Sbjct: 422 LSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMVGEVETVIAEMKRSRV 481

Query: 432 FPDSHIIALVLNSY 445
             D H I +V+  Y
Sbjct: 482 RVDEHSIPVVIKMY 495



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/379 (20%), Positives = 155/379 (40%), Gaps = 67/379 (17%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    ++ V+    R  +   A G+++EM + G+ P+   Y +LI  F + G  + A+
Sbjct: 620 FKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEAL 679

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + ++M++  +S + ++ ++LI+   K+     A +++  +K     PD+VA N+MIN++
Sbjct: 680 CYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLY 739

Query: 135 GKAKLFKEARLLIE----------------------------------EMREQGVKPDTV 160
               L  EA+L+ +                                  EM++ G+  D  
Sbjct: 740 ADLGLVSEAKLIFDDLRQKGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCA 799

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           S++ ++  Y  N +      +  EM       D  T  +M  V  +  +  +A     S 
Sbjct: 800 SFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESS 859

Query: 221 RKMG---------------------------------IDPSVVSYNTLLRVYGEAELFGE 247
            + G                                 +D     YN  +  YG +    +
Sbjct: 860 YQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDK 919

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  MQ + +E ++VTY  +   YGK+   E    +  +++ R IEPN   +  II 
Sbjct: 920 ALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIID 979

Query: 308 IWGKAGKLDRAAMLFQKLR 326
            +  A + D A ++ Q+++
Sbjct: 980 AYRSAKRHDLAELVSQEMK 998


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 210/452 (46%), Gaps = 34/452 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+   +  +++ +    Q   A    D +   G   D+  Y TLI    K G   +A+
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAAL 182

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++++ + V  ++V+YS +I+   K    + A  ++S + S GI P++V Y+ +I+ F
Sbjct: 183 DLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLD 193
                 K+A  L  +M  + +KPD  +++ L++ + ++ K  E  +VFA M +    P  
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +T C++M D Y  +     A  + ++M + G++P + SYN L+  + + +   EA++LF+
Sbjct: 303 VTYCSLM-DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K I  +VVTYN++I    K  +   A  L+ EM +RG+ P+ ITYS+I+    K  
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++D+A  L  KL+  G+                               +PN       I 
Sbjct: 422 QVDKAIALLTKLKDQGI-------------------------------RPNMYTYTILID 450

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + GR+E+A  +F      G    ++ +  MI  F     +   + +  KM+     P
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           D+    +++ S     E + A+ L  EM   G
Sbjct: 511 DAVTYEIIIRSLFDKDENDKAEKL-REMITRG 541



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 147/281 (52%), Gaps = 5/281 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAI 74
           P V+ +N+++    +  + +    +F  M ++GI P+  TY +L+   C  KE   + A 
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE--VNKAK 322

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L  M Q  V+ D+  Y+ LI+   K+    +A+++F  +    I+PD+V YN++I+  
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K      A  L++EM ++GV PD ++YS++L+   +NH+  +A+++  ++ +     ++
Sbjct: 383 CKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNM 442

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I+ID   +    +DA  +F  +   G + +V +Y  ++  +    LF EA+ L   
Sbjct: 443 YTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSK 502

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           M+      + VTY  +I+      E++KA  L +EM  RG+
Sbjct: 503 MKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGL 542



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/490 (20%), Positives = 206/490 (42%), Gaps = 56/490 (11%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG---MFDS 72
           +P    +N +L +++++K +     L  +M   GI P  + +       G       F +
Sbjct: 73  TPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTT 132

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            I  L    Q  +   L+ + N++ +  +L                    D V Y T+I+
Sbjct: 133 LIKGLCLKGQ--IHQALLFHDNVVAMGFQL--------------------DQVGYGTLIH 170

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    + A  L+  +    V+P+ V YST+++   ++    +A  +++EM       
Sbjct: 171 GLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 230

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T + +I  +  +   KDA  LF  M    I P V ++N L+  + +     E   +F
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 290

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M ++ I+ NVVTY +++  Y    E  KA +++  M  RG+ P+  +Y+ +I  + K 
Sbjct: 291 AMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI 350

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            K+D A  LF+++                          H K ++     P+ +   + I
Sbjct: 351 KKVDEAMNLFKEM--------------------------HHKHII-----PDVVTYNSLI 379

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G+I  A  +  +  D G   DI  +  +++   +N +    I +  K++  G  
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+ +   ++++   K    E A +++ ++  +G   +   +  M+  +  +  F+   +L
Sbjct: 440 PNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 499

Query: 493 FERLDSDSNI 502
             ++  +S I
Sbjct: 500 LSKMKDNSCI 509



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/325 (20%), Positives = 138/325 (42%), Gaps = 20/325 (6%)

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIM------------IDVYGQ 206
           + YS++   +  N+  V+A S+F+ +   N  P  +    I+            + +  Q
Sbjct: 42  IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101

Query: 207 LDMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           ++       LF      + MG  P+ +++ TL++         +A+     +     + +
Sbjct: 102 MEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLD 161

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
            V Y T+I    K  E   A +L++ +    ++PN + YSTII    K   ++ A  L+ 
Sbjct: 162 QVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 221

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAG 379
           ++ S G+  + V Y  +I  +  VG +  A  L +++   N  P      IL     + G
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 281

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           +++E   VF      G   ++  +  +++ +   K+      +   M   G  PD     
Sbjct: 282 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYN 341

Query: 440 LVLNSYGKLREFETADDLYSEMQEE 464
           ++++ + K+++ + A +L+ EM  +
Sbjct: 342 ILIDGFCKIKKVDEAMNLFKEMHHK 366



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/320 (19%), Positives = 138/320 (43%), Gaps = 28/320 (8%)

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI----------- 295
           +A  LF  + R+      + +N ++    KS  +    +L Q+M+  GI           
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118

Query: 296 -----EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
                 PN IT++T+I      G++ +A +    + + G ++D V Y T+I    +VG  
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178

Query: 351 AHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  LL      L QPN +   T I  + +   + +A  ++ +    G   ++  +  +
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F    +  + I++F KM      PD +   ++++ + K  + +    +++ M ++G 
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK-ELHHVVAGIYERANRLNDAS 525
             +   +  ++  Y   K+ N  +S+   + S   +N   + ++++   + +  ++++A 
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTM-SQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 526 RIMNRMNKRR------TFNS 539
            +   M+ +       T+NS
Sbjct: 358 NLFKEMHHKHIIPDVVTYNS 377


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 208/463 (44%), Gaps = 20/463 (4%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  PD  TY TLI    K G   +AI
Sbjct: 127 HQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 186

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  M Q     ++  Y+ +I+   K    ++A ++FS + + GI PD+  YN++I+  
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +K    L+ EM +  + PD VS++T+++   +  K  EA  V  +M +     ++
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNV 306

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   ++D +  L    +A ++F +M   G  P+V+SYNTL+  Y + +   +AIH    
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH---- 362

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
                       Y  ++      L  ++A  +   M  +G  PN I+Y+T+I  + K  +
Sbjct: 363 ------------YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 410

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
           +D+A  LF ++    +  D V Y T+I     V  +  A  L HE+    + PN +    
Sbjct: 411 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 470

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L +   + EA  + +    +    DI V    I+   R  +     ++F  + S G
Sbjct: 471 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 530

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             PD    ++++N   +    + A  L+ EM E GC  +  ++
Sbjct: 531 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 573



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 213/454 (46%), Gaps = 24/454 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+VFAYN ++ ++ + +Q   A  LF EM  +GI+PD +TY++LI        +    + 
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M   ++  D+V ++ +++   K    ++A  +  ++   G+ P++V Y  +++    
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  + + M  +G  P+ +SY+TL+N Y +  +  +A+     M+   C L++  
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM-- 376

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
                          +A ++F +M   G  P+V+SYNTL+  Y + +   +A++LF  M 
Sbjct: 377 --------------DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R+E+  + VTY+T+I         + A  L  EM      PN +TY  ++    K   L 
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + +  S ++ D  +    I    R G +  A+ L   L     QP+       I
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R G ++EA+ +FR+  + G   +  ++  +   F RN + +  I++ ++M + G+ 
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            D+  + L    + K+   +  D    ++   GC
Sbjct: 603 ADASTMTL----FVKMLSDDGLDQSLKQILRNGC 632



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/541 (22%), Positives = 233/541 (43%), Gaps = 23/541 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + K       L  +M   GI P+ YT   LI  F        A S 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  PD+V Y T+IN   K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M ++  +P+  +Y+T+++   ++ +  EA ++F+EM       D+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I     L   K    L   M    I P VVS+NT++    +     EA  +   M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E NVVTY  ++  +    E ++A  +   M  +G  PN I+Y+T+I  + K  ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 317 R-------------------AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           +                   A  +F  +   G   + + Y T+I  Y ++  +  A  L 
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 358 HEL-RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+ RQ   P+T+   T I  L    R+++A  +F +     ++ ++  +  +++   +N
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           +  A  + + + +  +   PD  +  + ++   +  E E A DL+S +  +G       +
Sbjct: 479 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 538

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             M++    R   +    LF  +D +       +++ +   + R N  + A +++  M  
Sbjct: 539 SIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 598

Query: 534 R 534
           R
Sbjct: 599 R 599



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 168/370 (45%), Gaps = 58/370 (15%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGM 69
           +++  P V ++N V+  + +  +   AH + D+M QRG+ P+  TY+ L+   C   E  
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE-- 321

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI-------------------S 110
            D A+     M       +++ Y+ LI    K+    KAI                    
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           +F  +   G +P++++YNT+IN + K +   +A  L  EM  Q + PDTV+YSTL++   
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              +  +A+++F EM  V C               Q+                   P++V
Sbjct: 442 HVERLQDAIALFHEM--VAC--------------SQI-------------------PNLV 466

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y  LL    +     EA+ L + ++   ++ ++   N  I    ++ E E A +L   +
Sbjct: 467 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 526

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            ++G++P+  TYS +I    + G LD A+ LF+++  +G  ++  +Y T+   + R    
Sbjct: 527 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 586

Query: 351 AHAKRLLHEL 360
           + A +LL E+
Sbjct: 587 SRAIQLLQEM 596



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 176/402 (43%), Gaps = 26/402 (6%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D AIS   +M + +     V ++ L+    K+  +S  +S+  ++ S GI P++   + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN F        A  ++ ++ + G +PDT +++TL+       K  EAL +F +M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T   +I+   ++     A RL  SM +    P+V +YNT++    +     EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           +LF  M  K I  ++ TYN++I       E +    L+ EM +  I P+ ++++T++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K GK+  A  +  K+   GVE + V Y  ++  +  +  +  A ++   +      PN 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV---IEV 422
           I   T I    +  RI++A                        L      Y N+   ++V
Sbjct: 342 ISYNTLINGYCKIQRIDKAIHY-------------------TXLMDXXCCYLNMDEAVKV 382

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           F+ M   G  P+      ++N Y K++  + A  L+ EM  +
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 424



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L  I E +   P +   N+ +  + RA + E A  LF  +  +G+ PD +TYS +I
Sbjct: 484 AMALLKAI-EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               + G+ D A    ++M+++  + +  +Y+ +     + ++ S+AI +   + + G  
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602

Query: 122 PD 123
            D
Sbjct: 603 AD 604


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 214/453 (47%), Gaps = 6/453 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y++++    +    E A  LF E + +    +   YS +I    + G  D A   +
Sbjct: 322 TVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELV 381

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           ++ME+D +   + +Y +++       D  K + +F RLK  G  P +++Y  +IN++ K 
Sbjct: 382 REMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKI 441

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               +A  + +EM   G+K +  +YS L+N ++  H F  A S+F +M +     D    
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N++++ + ++     A R+F  M+K  + PS  ++  ++  +  A     A+    LM+R
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                 V+TYN +I    +  + E+A +++ +M   GI PN  TY+ I+  +  +G + +
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 621

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-TIL- 375
           A   F K++ SG+++D  +Y+T++ A  + G +  A  +  E+     IPR T I  IL 
Sbjct: 622 AFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM-SFQKIPRNTFIYNILI 680

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              AR G + EA  + +Q  + G   +I  F   I    +         V ++M   G  
Sbjct: 681 DGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLK 740

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+      ++  + K+   + A   + EM+  G
Sbjct: 741 PNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAG 773



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 186/393 (47%), Gaps = 10/393 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + PS+ +Y  ++   ++  +   A  +  EM   GI  +  TYS LI  F     F
Sbjct: 420 KECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDF 479

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A S  + M +  +  D  +Y+ L+E   K+ +  +AI IF R+K   + P    +  +
Sbjct: 480 ANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPI 539

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F  A   K A   ++ MR  G  P  ++Y+ L++  +  H+   A+SV  +M+    
Sbjct: 540 IEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGI 599

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T  I++  Y        A   F  +++ G+   V  Y TLLR   ++     A+ 
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + R M  ++I +N   YN +I  + +  +  +A +LM++M+  GI PN  T+++ I    
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACC 719

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KAG + RA  + Q++   G++ +   + T+I  + +V L   A +   E++     P E 
Sbjct: 720 KAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEA 779

Query: 371 A-----ITILARAGRIEEATW-----VFRQAFD 393
           A      ++L+RA  +E +T+     V R+ F+
Sbjct: 780 AYHCLVTSLLSRATVMEGSTYTGILSVCREMFE 812



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/451 (20%), Positives = 201/451 (44%), Gaps = 28/451 (6%)

Query: 26  LRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
            R VL  R + W+     F+ + +    P R  +  ++  + K G    A +  + M   
Sbjct: 227 FRRVLESRPEDWQAVVSAFERIPK----PSRREFGLMVVYYAKRGDKHHARATFENMRAR 282

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA------ 137
            +  +  ++++L+       D   A+S    +KS G+   +V Y+ +I  +GK       
Sbjct: 283 GIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESA 342

Query: 138 -KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDL 194
            KLFKEA+  ++ +       + + YS +++ + ++     A  +  EM E  ++ P+D+
Sbjct: 343 DKLFKEAKTKLDNL-------NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDV 395

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              + M+  Y      K    +F  +++ G  PS++SY  L+ +Y +     +A+ + + 
Sbjct: 396 Y--HSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKE 453

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   I+ N  TY+ +I  +    +   A ++ ++M   G++P+   Y+ ++  + K G 
Sbjct: 454 MESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGN 513

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           +DRA  +F++++   ++     ++ +I  +   G +  A   L  +R+    P  +    
Sbjct: 514 MDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNA 573

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L R  ++E A  V  +   AG   +   +  ++  ++ +       E F K++ +G
Sbjct: 574 LIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 633

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              D +I   +L +  K    ++A  +  EM
Sbjct: 634 LKLDVYIYETLLRACCKSGRMQSALAVTREM 664



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 4/273 (1%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +  M+  Y K  +   A    + M+ RGIEPNA  +++++  +  A  +  A    ++++
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIE 382
           S G+E+  V Y  +I  Y +      A +L  E +      N I     I    ++G ++
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 375

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  + R+  + G    I V+  M+  ++  +     + VFE+++  G+ P       ++
Sbjct: 376 RAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLI 435

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           N Y K+ +   A  +  EM+  G   +++ +  +++ +    DF    S+FE +      
Sbjct: 436 NLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQ 495

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
             + +++++   + +   ++ A RI  RM K R
Sbjct: 496 PDRAIYNLLVEAFCKMGNMDRAIRIFERMKKER 528


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 5/432 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G  ++AI
Sbjct: 135 HQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 194

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ MEQ     D+V+Y+++I+   K    ++A ++FS++   GI PD+  Y ++I+  
Sbjct: 195 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 254

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +K    L+ +M    + PD V +ST+++   +  K  EA  V   M       ++
Sbjct: 255 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 314

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D +       +A ++F +M   G  P+V+SYNTL+  Y + +   +A +LF  
Sbjct: 315 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 374

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +KE+  N VTYNT++         + A  L  EM   G  P+  TY  ++    K   
Sbjct: 375 MCQKELIPNTVTYNTLMHXCHVG-RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 433

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           LD A  L + +  S ++ D  +Y  +I    R G +  A+ +   L     +PN      
Sbjct: 434 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 493

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L R G ++EA  +F +    G   D   +  + +   +NK+    I++ ++M + G
Sbjct: 494 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 553

Query: 431 YFPDSHIIALVL 442
           +  D     L++
Sbjct: 554 FSADVSTTTLLV 565



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 203/454 (44%), Gaps = 5/454 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + KQ+     L ++M   GI PD YT + LI  F        A S 
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI           A+ +F ++   G  P++V Y T+IN   K
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +PD V Y+++++   ++ +  EA ++F++M       D+ T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I     L   K    L   M    I P VV ++T++    +     EA  +  +M 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E NVVTYN ++  +    E ++A  +   M + G  PN I+Y+T+I  + K  ++D
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
           +A  LF+++    +  + V Y T++     VG +  A  L HE+     IP      I  
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   ++EA  + +    +    DI ++  +I+   R  +     ++F  + S G  
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           P+     +++N   +    + A+ L+ EM   GC
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 164/350 (46%), Gaps = 1/350 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF +M  +GI+PD +TY++LI        +
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L QM   ++  D+V++S +++   K    ++A  +   +   G+ P++V YN +
Sbjct: 261 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 320

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M   G  P+ +SY+TL+N Y +  +  +A  +F EM +   
Sbjct: 321 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 380

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N ++     +   +DA  LF  M   G  P + +Y  LL    +     EA+ 
Sbjct: 381 IPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   ++ ++  Y  +I    ++ E E A ++   + ++G+ PN  TY+ +I    
Sbjct: 440 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           + G LD A  LF ++  +G   D   Y T+     +      A +LL E+
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 181/434 (41%), Gaps = 38/434 (8%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+S   +M         V ++ L+    K   Y    S+ +++ S GI PD+   N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN F        A  ++ ++ + G +PDT +++TL+       K  +AL +F +M    
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ T   +I+   ++     A RL  SM +    P VV Y +++    +     EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN----------------- 292
           +LF  M  + I  ++ TY ++I       E +  T L+ +M N                 
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 293 ------------------RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                             RG+EPN +TY+ ++       ++D A  +F  +  +G   + 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL---ARAGRIEEATWVFRQA 391
           + Y T+I  Y ++  +  A  L  E+ Q   IP       L      GR+++A  +F + 
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEM 409

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G++ D++ +  +++   +       + + + +  +   PD  I  +V++   +  E 
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 452 ETADDLYSEMQEEG 465
           E A D++S +  +G
Sbjct: 470 EAARDIFSNLSSKG 483



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 8/309 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           ++  P V  ++ V+  + +  +   AH + D M  RG+ P+  TY+ L+     +   D 
Sbjct: 273 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 332

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+     M  +  + +++ Y+ LI    K+    KA  +F  +    ++P+ V YNT+++
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                +L ++A  L  EM   G  PD  +Y  LL+   +     EA+++   +   N   
Sbjct: 393 XCHVGRL-QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 451

Query: 193 DLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D+    I+ID     G+L+ A+D   +F ++   G+ P+V +Y  ++       L  EA 
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARD---IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  M       +  TYNT+ +   ++ E  +A  L+QEM  RG   +  T + ++ + 
Sbjct: 509 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568

Query: 310 GKAGKLDRA 318
               KLD++
Sbjct: 569 CD-DKLDQS 576


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 221/495 (44%), Gaps = 50/495 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V   N VLR +  A +W+    ++ EM Q  I P   TY+TL+  F KEG  D A  
Sbjct: 205 APDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASM 264

Query: 76  WLQQMEQDRVSGDL--VLYSNLI---------ELARKLSD---YSKAISIFS-------- 113
            L++ME       L  V Y+ +I         E A KL D    SK  S F+        
Sbjct: 265 LLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITAL 324

Query: 114 --------------RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
                          +++ GI+P LV YN +I+   K++  + A+L   EMR  G+ PD 
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++Y+++LN Y +     EAL +  ++        + T N +ID Y +L   ++A RL   
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK---IYGK 276
           M + G  P V +Y  L+    +      A   F  M  K ++ +   YNT I    I G 
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 504

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +    KA  L + M  +GI P+ +TY+ II    K G L  A  L  K+ S G++ D + 
Sbjct: 505 T---HKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561

Query: 337 YQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  +I A+   GL++ A++LL+ +     QP+ +     I    R G +  A   FR+  
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           D G   +   +  +I    R  +       F +M   G  P+ +   L+++  G  RE  
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLID--GNCREGN 679

Query: 453 TADD--LYSEMQEEG 465
            AD   LY EM + G
Sbjct: 680 WADAIRLYFEMHQNG 694



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 11/420 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YNVV+  + R    E A  L D MR    A   +TY+ LIT   + G      +   +ME
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSMRLSKKA-SSFTYNPLITALLERGFVQKVEALQMEME 341

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            + +   LV Y+ +I    K      A   F+ +++ G++PDL+ YN+M+N + KA   K
Sbjct: 342 NEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLK 401

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  L+ ++R  G+ P  ++Y+TL++ Y       EA  +  EM E  C  D+ T  I++
Sbjct: 402 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILM 461

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL---MQRK 258
           +   ++     A   F  M   G+ P   +YNT  R+  E  + G+    F+L   M  K
Sbjct: 462 NGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT--RICAEL-ILGDTHKAFQLREVMMLK 518

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  + VTYN +I    K+   + A +L  +M + G++P+ ITY+ +I    + G L  A
Sbjct: 519 GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEA 578

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITI 374
             L   + S G++   V Y  +I    R G +  A    +++L    +PN I     I  
Sbjct: 579 RKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 638

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L R GR   A   F +  + G   +   +  +I+   R   +A+ I ++ +M   G  PD
Sbjct: 639 LCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 7/356 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN ++  +L+++Q E A   F EMR  G+ PD  TY++++  + K G    A+  
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  + +  ++  ++ Y+ LI+   +L    +A  +   +   G  PD+  Y  ++N   K
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLN---LYVENHKFVEALSVFAEMNEVNCPLD 193
            +    AR   +EM  +G++PD  +Y+T +    +  + HK  +   V   M +   P D
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM--MLKGIYP-D 523

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T N++ID   +    KDA  L   M   G+ P  ++Y  L+  + E  L  EA  L  
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLN 583

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    ++ +VVTY  +I    +      A    ++M + GIEPN ITY+ +I    + G
Sbjct: 584 GMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           +   A   F ++   G+  +   Y  +I    R G  A A RL  E+ Q N IP +
Sbjct: 644 RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ-NGIPPD 698



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 17/369 (4%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
            ++ F  +   G+ PD+   N ++ V   A  + + R +  EM +  ++P  V+Y+TLL+
Sbjct: 192 CLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLD 251

Query: 168 LYVENHKFVEALSVFAEMNEV--NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
            +++  +  EA  +  EM      C L+  T N++I    +    ++A +L  SMR +  
Sbjct: 252 SFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSK 310

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
             S  +YN L+    E     +   L   M+ + I   +VTYN +I    KS + E A  
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
              EM+  G+ P+ ITY++++  + KAG L  A  L   LR +G+    + Y T+I  Y 
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R+G +  A+RL  E+ +    P     TIL           + R+ FD    K     G 
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK-----GL 485

Query: 406 MIELFSRNKKYA---------NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             + F+ N +              ++ E M   G +PD+    ++++   K    + A D
Sbjct: 486 QPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKD 545

Query: 457 LYSEMQEEG 465
           L  +M  +G
Sbjct: 546 LKMKMVSDG 554



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 9/271 (3%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G+ P V   N +LRV  +A  + +   ++R M + EIE  +VTYNT++  + K    ++A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 284 TNLMQEM--QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           + L++EM  Q  G   N +TY+ +I+   + G L+ AA L   +R S  +     Y  +I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLI 321

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
            A    G V   + L  E+      P  +     I  L ++ ++E A   F +    G +
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  M+  + +       + +   +R AG  P       +++ Y +L   E A  L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
             EM E+GC F D   + +L + G+ K  N+
Sbjct: 442 KEEMVEQGC-FPDVCTYTIL-MNGSHKVRNL 470



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 58/124 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  Y +++    R      A+G F +M   GI P+  TY+ LI    + G    A   
Sbjct: 592 PSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHH 651

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  ++ +   Y+ LI+   +  +++ AI ++  +  +GI PD   +N +   F K
Sbjct: 652 FHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK 711

Query: 137 AKLF 140
             ++
Sbjct: 712 GHMY 715


>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
 gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
          Length = 978

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/548 (23%), Positives = 242/548 (44%), Gaps = 27/548 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  +P+ F Y VV+ +  +    E A   F EM++R   P+  TYS LI+   K G  +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +M+   +       ++++ L  K  DYSKA+S+FS ++ + IVPD V Y  ++
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            ++GK  L+++A+ + EE+ + G+  D  +Y  +  +++    +  AL V   M   N  
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               + + ++  +   +    A+  F ++   G  P V   N LLR+Y       +A  L
Sbjct: 448 PSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARAL 506

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI---------------- 295
              M+++ ++ +     T++++  K+  ++   NL + +QN G                 
Sbjct: 507 ILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMM 566

Query: 296 ------EPNAIT-YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
                 +P  ++  S +I  + + G  D A  L++ L   G + D     T+IV Y +  
Sbjct: 567 LKSLLDKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQ 626

Query: 349 LVAHAKRLLHELRQPNTIPRE---TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
            +  A++L         +        +  L R G+ EEA  +F +  D G   D      
Sbjct: 627 QLEQAQKLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISI 686

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++   ++  K  + + ++++M S+G         ++++ YG+  + E A +++S  QE G
Sbjct: 687 LVTHLTKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELG 746

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
               ++ +  MLS YG     +    LF R+  D     K   + +   Y  +   N+A 
Sbjct: 747 LPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAE 806

Query: 526 RIMNRMNK 533
            I   M K
Sbjct: 807 IIFQEMQK 814



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 214/479 (44%), Gaps = 30/479 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV AY ++LR   +  + +LA   F EM Q G  PD     TL+  + + 
Sbjct: 159 WMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARW 218

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  +  + +   + +  +   + +++ ++   +K   + K I ++ ++  + + P+   Y
Sbjct: 219 GKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTY 278

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I  + K  + +EA     EM+ +   P+  +YS L++L  ++ K  EAL ++ EM  
Sbjct: 279 TVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKV 338

Query: 188 VN-CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
            +  P + T  +++   Y   D +K A  LF  M +  I P  V Y  L+R+YG+  L+ 
Sbjct: 339 KSIVPSNYTCASVLTLYYKNEDYSK-ALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYE 397

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  +F  + +  +  +  TY  M +++     +++A  ++  M+ R ++P+  +YS ++
Sbjct: 398 DAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALL 457

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-T 365
                   +D A   F+ L + G   D      ++  Y R+G +  A+ L+ ++R+    
Sbjct: 458 RCHVAKEDVDAAEDTFRALSNYGPP-DVFCCNDLLRLYMRLGHLDKARALILKMRKEALQ 516

Query: 366 IPRETAITILARAGR------IEEATWVFRQAFDAGEV---KDISVFGCMIEL------- 409
              +  +T+L    +       +  T V +    + +V    D S    M++        
Sbjct: 517 FDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGG 576

Query: 410 ----------FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
                     F+R         ++E +   G  PD   IA ++  YG+ ++ E A  L+
Sbjct: 577 LSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLF 635



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 2/316 (0%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           S LI  F +EG  D A    + + +     D    + LI    +     +A  +F    +
Sbjct: 581 SQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETAST 640

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           S  V   V YN M++   +    +EA  L  E+ +QG   D V+ S L+    +  K   
Sbjct: 641 SFPVGGSV-YNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQGKLYS 699

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A+S++  M     P  + T NIMI VYGQ    + A  +F + +++G+     +Y  +L 
Sbjct: 700 AVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLS 759

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            YG+A    EA  LF  M+   I    +++NTMI  Y  S  H +A  + QEMQ     P
Sbjct: 760 FYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVP 819

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           ++ TY  +I  + +     +A    Q +  S +      +  +I A+ + G +  A+R+ 
Sbjct: 820 DSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMY 879

Query: 358 HELRQPNTIPRETAIT 373
           +++ +   IP + A  
Sbjct: 880 NQMEEAG-IPADLACC 894



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 5/346 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           + +  M  V  + + +++AR     M+ Q   +P  V+Y+ LL LY +  K   A   F 
Sbjct: 135 LTFREMCFVLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFL 194

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM +  C  D   C  ++  Y +     D    + ++R+  I PS+  +N ++    + +
Sbjct: 195 EMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQK 254

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L G+ IHL+  M    +  N  TY  +I  Y K    E+A +   EM+ R   P   TYS
Sbjct: 255 LHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYS 314

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I++  K GK + A  L+ +++   +        +++  Y +    + A  L  E+ Q 
Sbjct: 315 LLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQN 374

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             +P E    IL R     G  E+A  +F +   AG + D   +  M ++    + Y   
Sbjct: 375 KIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRA 434

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++V + MR+    P     + +L  +    + + A+D +  +   G
Sbjct: 435 LQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG 480



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 159/355 (44%), Gaps = 12/355 (3%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L++ + + G  PD    +TLI  +G+    + A    +        G  V Y+ +++   
Sbjct: 599 LYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETASTSFPVGGSV-YNAMVDALC 657

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +     +A  +F  L   G   D V  + ++    K      A  + + M   G+     
Sbjct: 658 RCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQGKLYSAVSIYDRMISSGIPRSMQ 717

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++ ++++Y +  K  +A+ +F+   E+  P+D  T   M+  YG+     +A  LF  M
Sbjct: 718 TFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRM 777

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           ++ GI P  +S+NT++  Y  + L  EA  +F+ MQ+     +  TY  +I+ Y +   +
Sbjct: 778 KEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCY 837

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            KA   +Q M    + P+   ++ +I+ + K G++D A  ++ ++  +G+  D    +TM
Sbjct: 838 SKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIPADLACCRTM 897

Query: 341 IVAYERVGLV-------AHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
           +  +   G V         A RLL    +P++     A  +   +GR  EA  V 
Sbjct: 898 MRMHLDHGYVDDGILFFETACRLL----KPDSFILSAAFHLYEHSGRESEAGDVL 948



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 5/311 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++  + R  + E A+ LF E+  +G   D  T S L+T   K+G   SA+S   +M 
Sbjct: 649 YNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQGKLYSAVSIYDRMI 708

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +   +  ++ +I +  +     KA+ +FS  +  G+  D   Y  M++ +GKA    
Sbjct: 709 SSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHH 768

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA LL   M+E G++P  +S++T++N Y  +    EA  +F EM + N   D  T   +I
Sbjct: 769 EASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALI 828

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             Y +      A+     M +  + PS   +N L+  + +     EA  ++  M+   I 
Sbjct: 829 RAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIP 888

Query: 262 QNVVTYNTMIKIYGKSLEHEKATN--LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            ++    TM++++   L+H    +  L  E   R ++P++   S    ++  +G+   A 
Sbjct: 889 ADLACCRTMMRMH---LDHGYVDDGILFFETACRLLKPDSFILSAAFHLYEHSGRESEAG 945

Query: 320 MLFQKLRSSGV 330
            +   +  SG 
Sbjct: 946 DVLDAINMSGA 956



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 163/380 (42%), Gaps = 3/380 (0%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ L+ L  ++     A   F  +  +G  PD VA  T++  + +     +  +   
Sbjct: 170 VVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYA 229

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +R + + P    ++ +++   +     + + ++ +M E N   +  T  ++I  Y +  
Sbjct: 230 AVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEG 289

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
           M ++A   F  M++    P   +Y+ L+ +  +     EA+ L+  M+ K I  +  T  
Sbjct: 290 MLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCA 349

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++ +Y K+ ++ KA +L  EM+   I P+ + Y  ++ I+GK G  + A  +F+++  +
Sbjct: 350 SVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKA 409

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
           G+  D   Y  M   +  V     A ++L  +R  N  P + + + L R    +E     
Sbjct: 410 GLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAA 469

Query: 389 RQAFDA-GEVKDISVFGC--MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
              F A        VF C  ++ L+ R         +  KMR      D  +   VL   
Sbjct: 470 EDTFRALSNYGPPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVC 529

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    +  D+L   +Q EG
Sbjct: 530 CKTSINKDTDNLTEVIQNEG 549



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 134/279 (48%), Gaps = 10/279 (3%)

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E +VV Y  ++++YG+  + + A     EM   G EP+A+   T++  + + GKL+   M
Sbjct: 167 EPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
            +  +R   +     ++  M+ + ++  L      L  ++ + N  P +   T++    A
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA   F +      V + + +  +I L +++ K    + ++++M+     P ++
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A VL  Y K  ++  A  L+SEM++   V  + ++  ++ +YG    +   + +FE +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 497 DSDSNINKKELHHVVAGI------YERANRLNDASRIMN 529
           D    ++ ++ +  +A +      Y+RA ++ DA R  N
Sbjct: 407 DKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARN 445



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 41/243 (16%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+  +N+++    +  + E A  +F   ++ G+  D  TY+ +++ +GK G         
Sbjct: 715 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAG--------- 765

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
                                      + +A  +FSR+K  GI P  +++NTMIN +  +
Sbjct: 766 --------------------------KHHEASLLFSRMKEDGIRPGKISFNTMINAYATS 799

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  EA ++ +EM++    PD+ +Y  L+  Y E   + +A      M   N     T  
Sbjct: 800 GLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHF 859

Query: 198 NIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N +I  +   GQ+D   +A R++  M + GI   +    T++R++ +     + I  F  
Sbjct: 860 NHLISAFLKEGQID---EAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVDDGILFFET 916

Query: 255 MQR 257
             R
Sbjct: 917 ACR 919



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 115/242 (47%), Gaps = 4/242 (1%)

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EP+ + Y+ ++ ++G+ GK+  A + F ++  +G E D V   T++ AY R G +     
Sbjct: 167 EPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 356 LLHELRQPNTIPRETAITILARAGRIEE----ATWVFRQAFDAGEVKDISVFGCMIELFS 411
               +R+ + +P  +    +  + + ++       ++ Q  +A    +   +  +I  ++
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +       ++ F +M+   + P+    +L+++   K  + E A  LY EM+ +  V S+ 
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +L+LY   +D++   SLF  ++ +  +  + ++ ++  IY +     DA R+   +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 532 NK 533
           +K
Sbjct: 407 DK 408



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 1/170 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   ++N ++     +     A  +F EM++    PD +TY  LI  + +   +  A   
Sbjct: 784 PGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEA 843

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +Q M +  ++     +++LI    K     +A  ++++++ +GI  DL    TM+ +   
Sbjct: 844 IQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLD 903

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
                +  +L  E   + +KPD+   S   +LY  + +  EA  V   +N
Sbjct: 904 HGYVDDG-ILFFETACRLLKPDSFILSAAFHLYEHSGRESEAGDVLDAIN 952


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 253/576 (43%), Gaps = 59/576 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P V +YN VL   +R+K+    A  +F EM Q  ++P+ +TY+ LI  F   G  D A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVA 224

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           + +  +ME+     ++V Y+ LI+   KL        +   +   G+ P+L++YN +IN 
Sbjct: 225 LRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVING 284

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-------- 185
             +    KE   ++ EM ++G   D V+Y+TL+  Y +   F +AL + AEM        
Sbjct: 285 LCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPS 344

Query: 186 --------------NEVN--------------CPLDLTTCNIMIDVYGQLDMAKDADRLF 217
                           +N              CP + T    ++D + Q     +A R+ 
Sbjct: 345 VITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTY-TTLVDGFSQKGYMNEAYRVL 403

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   G  PSVV+YN L+  +  A    +AI +   M+ K +  +VV+Y+T++  + +S
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            + ++A  + ++M  +GI+P+ ITYS++I  + +  +   A  LF ++   G+  D   Y
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I AY   G +  A +L +E+ +    P+ +     I  L +  R  EA  +  + F 
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVI----------------EVFEKMRSAGYFPDSHI 437
              V     +  +IE  S N ++ +V+                +VFE M    + PD   
Sbjct: 584 EESVPSDVTYHTLIENCS-NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTA 642

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             ++++ + +  +   A  LY EM + G +        ++         N L S+   + 
Sbjct: 643 YNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL 702

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
               +++ E   V+  I  R   ++    ++  M K
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 202/426 (47%), Gaps = 6/426 (1%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA-RKLSDYSKAISIFSRL 115
           +  ++  + +  + D A+S +   +       ++ Y+ +++   R   + S A ++F  +
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
             S + P++  YN +I  F  A     A    + M ++G  P+ V+Y+TL++ Y +  K 
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            +   +   M       +L + N++I+   +    K+   +   M K G     V+YNTL
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           ++ Y +   F +A+ +   M R  +  +V+TY ++I    K+    +AT  + +M+ RG+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            PN  TY+T++  + + G ++ A  + +++  +G     V Y  +I  +   G +  A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 356 LLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           +L ++++    P+ +   T ++   R+  ++EA  V R+    G   D   +  +I+ F 
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
             ++     ++F++M   G  PD      ++N+Y    + + A  L++EM E+G V  D 
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG-VLPDV 555

Query: 472 VHFQML 477
           V + +L
Sbjct: 556 VTYSVL 561



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 23/276 (8%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L+ + E+   +P V +Y+ VL    R+   + A  +  +M  +GI PD  TYS+LI
Sbjct: 434 AIAVLEDMKEKG-LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             F ++     A     +M +  +  D   Y+ LI       D  KAI + + +   G++
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 122 PDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           PD+V Y+ +IN   K    +EA RLL++   E+ V P  V+Y TL    +EN   +E  S
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV-PSDVTYHTL----IENCSNIEFKS 607

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V +                +I  +    M  +AD++F SM +    P   +YN ++  + 
Sbjct: 608 VVS----------------LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHC 651

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
                 +A  L++ M +     + VT   ++K   K
Sbjct: 652 RGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHK 687



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 166/405 (40%), Gaps = 64/405 (15%)

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN- 189
           +++  + KL+K A+ L E++  + +  +  S                   VF  + E   
Sbjct: 87  LHILTRFKLYKTAQTLAEDVAAKTLDDEDASL------------------VFRSLQETYD 128

Query: 190 -CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT-------------- 234
            C    +  ++++  Y +L +   A  +    +  G  P V+SYN               
Sbjct: 129 LCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 235 ----------------------LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
                                 L+R +  A     A+  F  M++K    NVVTYNT+I 
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            Y K  + +    L++ M  +G+EPN I+Y+ +I    + G++   + +  ++   G  +
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 333 DPVLYQTMIVAYERVG-----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWV 387
           D V Y T+I  Y + G     LV HA+ L H L  P+ I   + I  + +AG +  AT  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-SPSVITYTSLIHSMCKAGNMNRATEF 367

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             Q    G   +   +  +++ FS+         V ++M   G+ P       ++N +  
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
             +   A  +  +M+E+G +  D V +  + L G  + +++ E+L
Sbjct: 428 AGKMVDAIAVLEDMKEKG-LTPDVVSYSTV-LSGFCRSYDVDEAL 470


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 218/467 (46%), Gaps = 4/467 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+    N +L+++LRA   EL   L   M   GI PD YTYST +    K   FD+A  
Sbjct: 207 APTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKK 266

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M +   + + V Y+ +I    +     +A      +   G+ PD   Y  ++N   
Sbjct: 267 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLC 326

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEA+ L++EM   G+KP+ V Y+TL++ +++  K  EA  +  EM       +  
Sbjct: 327 KGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI 386

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             + +I    ++     A +L   M K+G  P   +Y+ L++ + +      A  L   M
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   I  N  TY  MI    ++ E ++A NL++EM + G++PNA  Y+ +I    K G +
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A    + +  + V  D   Y ++I     VG +  A+    ++++   +P E   + L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                +   +E+A  + +Q  ++G   +   +  ++E + ++  +  V  + + M  +G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            PD+HI  +V+ +  +    E A  + +E+++ G V    ++  ++S
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/569 (22%), Positives = 238/569 (41%), Gaps = 50/569 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP  F Y  ++  + +  + + A  L DEM   G+ P+   Y+TL+  F KEG    A  
Sbjct: 312 SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFD 371

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLS-------------------------------- 103
            L +M    V  + ++Y NLI    K+                                 
Sbjct: 372 ILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHF 431

Query: 104 ---DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
              D   A  + + +++SGI+P+   Y  MIN   +    KEA  L+EEM  +G+KP+  
Sbjct: 432 QHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+ L+  + +      A      M + N   DL   N +I     +   ++A+  +  +
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G+ P   +Y+ L+  Y +     +A  L + M    ++ N  TY  +++ Y KS +H
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           EK ++++Q M   G +P+   Y  +I    ++  ++ A M+  ++  +G+  D  +Y ++
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 671

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    ++  +  A  LL E+     +P  +     I    R+G I  A  VF      G 
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + +   +  +I+   +N    +  ++++ M   G  PD+ +  ++        + E A  
Sbjct: 732 LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALF 791

Query: 457 LYSEMQEEGCVFSDQVHFQMLSL----YGARKDFNMLESLFE-RLDSDSNINKKELHHVV 511
           L  EM   G       H  + S     +  R      E L    +D +   N + + +V+
Sbjct: 792 LTEEMFNRG-----YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846

Query: 512 AGIYERANRLNDASRIMNRMNKRRTFNSS 540
              + +A +L +A R+   + +++   SS
Sbjct: 847 TE-FGKAGKLCEAHRVFAELQQKKASQSS 874



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/554 (22%), Positives = 244/554 (44%), Gaps = 44/554 (7%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YNV++  + R+   E A G  +EM   G++PD +TY  L+    K G    A + L +M 
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V+Y+ L++   K    ++A  I + + S+G+ P+ + Y+ +I    K     
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L+ EM + G +PDT +Y  L+  + +++    A  +  EM       +  T  IMI
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPS--------------------------------- 228
           +   Q   +K+A  L   M   G+ P+                                 
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522

Query: 229 --VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
             +  YN+L++         EA   +  +Q++ +  +  TY+ +I  Y K+   EKA  L
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
           +Q+M N G++PNA TY+ ++  + K+   ++ + + Q +  SG + D  +Y  +I    R
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 347 VGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
              +  A  +L E+ +   +P      + I+ L +   +E+A  +  +    G    I  
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I+ F R+   +    VF+ + + G  P+      +++   K  +   A DLY +M 
Sbjct: 703 YNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML 762

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLF--ERLDSDSNINKKELHHVVAGIYERANR 520
           + G +  D   + +L+  G     ++ ++LF  E + +    +      +V G  +R  R
Sbjct: 763 DRG-IAPDAFVYNVLAT-GCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRG-R 819

Query: 521 LNDASRIMNRMNKR 534
           L +  ++++ M  R
Sbjct: 820 LQETEKLLHVMMDR 833



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 207/467 (44%), Gaps = 5/467 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F Y+ +++   +    + A  L +EMR  GI P+ YTY  +I    + G    A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L++M  + +  +  +Y+ LI    K    S A      +  + ++PDL  YN++I   
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 +EA     +++++G+ PD  +YS L++ Y +     +A  +  +M       + 
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +++ Y + +  +    +  SM   G  P    Y  ++R    +E    A  +   
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +++  +  ++  Y+++I    K  + EKA  L+ EM   G+EP  + Y+ +I  + ++G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           + RA  +F  + + G+  + V Y  +I    + G +  A  L  ++      P      +
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 375 LAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           LA     A  +E+A ++  + F+ G    +S+F  ++  F +  +     ++   M    
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             P++  +  V+  +GK  +   A  +++E+Q++    S    F +L
Sbjct: 835 IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 40/383 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P +F YN +++ +    + E A   + ++++RG+ PD +TYS LI  + K    +
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   LQQM    +  +   Y++L+E   K +D+ K  SI   +  SG  PD   Y  +I
Sbjct: 578 KADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVI 637

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +++  + A +++ E+ + G+ PD   YS+L          +  L   A+M +    
Sbjct: 638 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL----------ISGLCKMADMEK---- 683

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                        G LD           M K G++P +V YN L+  +  +     A ++
Sbjct: 684 -----------AVGLLD----------EMAKEGLEPGIVCYNALIDGFCRSGDISRARNV 722

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  +  K +  N VTY  +I    K+ +   A +L ++M +RGI P+A  Y+ +      
Sbjct: 723 FDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSD 782

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A  L++A  L +++ + G      L+ T++  + + G +   ++LLH +      PN   
Sbjct: 783 AADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQT 841

Query: 368 RETAITILARAGRIEEATWVFRQ 390
            E  IT   +AG++ EA  VF +
Sbjct: 842 VENVITEFGKAGKLCEAHRVFAE 864



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 14/316 (4%)

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK-DADRLF 217
           T     L++ Y +N     A  V   M ++        CN ++      D+ + DA  L 
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLK-----DLLRADAMELV 229

Query: 218 WS----MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           W     M   GI P V +Y+T L  + +A  F  A  +F  M+R++   N VTYN MI  
Sbjct: 230 WKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 289

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +S   E+A    +EM + G+ P+A TY  ++    K G+L  A  L  ++  SG++ +
Sbjct: 290 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPN 349

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFR 389
            V+Y T++  + + G  A A  +L+E+     QPN I  +  I  L + G++  A+ +  
Sbjct: 350 VVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLN 409

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +    G   D   +  +++   ++       E+  +MR++G  P+++   +++N   +  
Sbjct: 410 EMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNG 469

Query: 450 EFETADDLYSEMQEEG 465
           E + A +L  EM  EG
Sbjct: 470 ESKEAGNLLEEMISEG 485



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 184/446 (41%), Gaps = 14/446 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L++  +K      A  +   +   G+ P     N ++    +A   +    L   M   G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           + PD  +YST L  + +   F  A  VF EM   +C ++  T N+MI    +    ++A 
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
                M   G+ P   +Y  L+    +     EA  L   M    ++ NVV Y T++  +
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K  +  +A +++ EM + G++PN I Y  +I    K G+L RA+ L  ++   G   D 
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420

Query: 335 VLYQTMIVA----YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             Y  ++      Y++ G    A  LL+E+R     PN       I  L + G  +EA  
Sbjct: 421 FTYHPLMQGHFQHYDKDG----AFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   +  ++  +I   S+    +   E  E M  A   PD      ++    
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER-LDSDSNINKK 505
            +   E A++ Y+++Q+ G V  +  +  ++  Y   ++    + L ++ L+S    N  
Sbjct: 537 TVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM 531
               ++ G Y ++N     S I+  M
Sbjct: 597 TYTDLLEG-YFKSNDHEKVSSILQSM 621


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 213/470 (45%), Gaps = 9/470 (1%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L+++ E  E + +P VF YN+++  + +A + + A  +  EM  RG+ PD  T+++++  
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G F+ A S L  M +         Y+ LI    K  +  +A  +     SSG VPD
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V Y+ + +   K     EA  L++EM  +G  P+ V+Y+TL++   +  K  +A  +  
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            +       D+ T  I++D   +      A ++   M K G  PSV++Y  L+       
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA H+F+ M  K+   + + Y +++  Y KS   ++A  ++  +  RG  P    Y+
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYN 542

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            ++  + K G+LD    +F+ +   G   +   Y  ++    + G V  A   L  +   
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602

Query: 364 NTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             +P   +  I    L +A + +EA  V  Q   AG   D   +  ++  F + +++ + 
Sbjct: 603 GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDA 662

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           + + + M  AG  PD+     +++   +      A +L  EM   GCV S
Sbjct: 663 VGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 712



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 242/599 (40%), Gaps = 84/599 (14%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W  +   +  S F  N  L+ +L     +    +F+ M   G APD YTY  +I    + 
Sbjct: 115 WAGDRG-FKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQM 173

Query: 68  GMFDSAISWLQQME-------------------------------QDRVSGDLVLYSNLI 96
              D A + L + +                               ++  S D + Y+ +I
Sbjct: 174 NQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAII 233

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
               + +D   A+     +    + PD+  YN +I+   KA    +A  ++ EM ++GV 
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ---LDMAKDA 213
           PDTV+++++++   +  KF  A S+ A M E NC     T N +I    +   +D AKD 
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
              F S    G  P VV+Y+ L     +     EA  L + M  K    N+VTYNT+I  
Sbjct: 354 VDEFVS---SGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             K+ + EKA  L++ + + G  P+ +TY+ I+    K G+LD+A  + + +   G    
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFR 389
            + Y  ++    R G V  A  +  E+   +      A   L     ++ R +EA  V  
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                     I V+  +++ + +  +   +  VFE M   G  P+     +V++   K  
Sbjct: 531 GIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 587

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKD---------------------F 486
           + + A      M   GCV  D V + ++   L+ A K                      +
Sbjct: 588 KVDEAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 646

Query: 487 NMLESLF---ERLDSDSNINKKEL-----------HHVVAGIYERANRLNDASRIMNRM 531
           N L + F   ER D    I K  +           + +++G+  + NRL DA  +M+ M
Sbjct: 647 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL-SQTNRLGDAYELMHEM 704



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 16/459 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  YN ++  + +A + E A+ L + +   G  PD  TY+ ++    KEG  D A+ 
Sbjct: 398 TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 457

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            ++ M +   +  ++ Y+ L+E   +     +A  IF  + S     D +AY +++N + 
Sbjct: 458 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 517

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+   KEA+ +++ +R     P    Y+ L++ Y +  +  E  +VF +M    C  ++ 
Sbjct: 518 KSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 574

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI++D   +     +A     SM   G  P VVSYN ++    +A    EA  +   M
Sbjct: 575 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM 634

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  I  + VTYNT++  + K    + A  +++ M   G++P+ +TY+T+I+   +  +L
Sbjct: 635 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694

Query: 316 -DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            D   ++ + LR+  V      Y T+I    + G +  A  L+  +     + NT+    
Sbjct: 695 GDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI 754

Query: 371 AITILARAGRIEEATWVFRQA---FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            I  L + GR++EA+ +  +     D      + +  C  E   R  K A      E + 
Sbjct: 755 FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAR-----EMVA 809

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G    SH   L+++++ K +  + A  L   M + GC
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 167/323 (51%), Gaps = 3/323 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN+++  + +A + + A  + D+M Q GI PD  TY+TL+  F KE  FD A+  
Sbjct: 606 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 665

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR-LKSSGIVPDLVAYNTMINVFG 135
           L+ M +  V  D V Y+ LI    + +    A  +    L++  +V     YNT+I+   
Sbjct: 666 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 725

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    K+A LL++ M   GV+ +TV+Y+  ++   +  +  EA S+ +EM+ +   +  T
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYT 785

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I +    QLD A    R   +++ + I  +  ++N L+  + + +   EA+ L  LM
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCI--TSHTFNLLIDAFTKTKRLDEALTLLGLM 843

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++    +V+TYN +I    K  + +KA  L  EM  RGI  ++++Y+ +I      G+ 
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 903

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQ 338
             A  + +++ SS  EID + ++
Sbjct: 904 KEALQVLEEMASSDCEIDDLKWE 926



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 36/382 (9%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P +  YN ++    +  + +    +F++M  RG  P+  TY+ ++    K G  D A
Sbjct: 533 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +L+ M       D+V Y+ +I+   K S   +A  +  ++  +GI PD V YNT++  
Sbjct: 593 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K + F +A  +++ M + GV PD V+Y+TL++   + ++  +A  +  EM    C + 
Sbjct: 653 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 712

Query: 194 -LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHL 251
             TT N +ID   +    K A  L   M   G++ + V+YN  + R+  E  L  EA  L
Sbjct: 713 ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL-DEASSL 771

Query: 252 FRLMQ--RKEIEQNVV-------------------------------TYNTMIKIYGKSL 278
              M   R E+    V                               T+N +I  + K+ 
Sbjct: 772 LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 831

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A  L+  M  RG  P+ ITY+ +I    K  K+D+A  LF ++   G+    V Y 
Sbjct: 832 RLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 891

Query: 339 TMIVAYERVGLVAHAKRLLHEL 360
            +I      G    A ++L E+
Sbjct: 892 VLIYGLCGQGRGKEALQVLEEM 913



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/310 (17%), Positives = 126/310 (40%), Gaps = 5/310 (1%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P+VVS     RV    +    AI  F     +  + +  T N  ++   ++   ++  
Sbjct: 91  LQPAVVS-----RVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIP 145

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            + + M + G  P++ TY  +I    +  ++D+A  +  K +  G + +  +Y  +  A+
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            + G +  A  +   +  P+ I     I    R    + A    ++  +     D+  + 
Sbjct: 206 CKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYN 265

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+   +  K     E+  +M   G  PD+     +++   K  +FE A  L + M E 
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
            C  S   +  ++S    +++ +  + L +   S   +     + ++A    +  R+++A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385

Query: 525 SRIMNRMNKR 534
             ++  M+ +
Sbjct: 386 FELVKEMSGK 395


>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
 gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
          Length = 477

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 187/365 (51%), Gaps = 2/365 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ I   + ++  Y P    Y  +L  + + KQ E A  LF+ M   G+ P    Y+ L+
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALV 169

Query: 62  TCFGKEGMFDSAISWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + +G+ G+   AIS + +M+       D+  YS LI+   +L  +     I + +   GI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGI 229

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             + V YNT+IN FGKAK+F++   LL+E +      PD ++++T +  Y  + +  +  
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + E   +    D+ T N MI  YG+  M      +   M K    P++V+ NT++  +
Sbjct: 290 KWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSF 349

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    E    F+ M+ + ++ N VTY +++  YGKS + EK  +++++++N  + P+ 
Sbjct: 350 GRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDT 409

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             ++ +I ++G+AG + +   LF +++ +    D + + TMI A +  G+   A+RL ++
Sbjct: 410 PLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 469

Query: 360 LRQPN 364
           L   N
Sbjct: 470 LIATN 474



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 179/398 (44%), Gaps = 47/398 (11%)

Query: 105 YSKAISIFSRLKSSGIV-PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           +  A+ IF  L+      P    Y  ++ + GK K  ++A LL E M  +G+KP    Y+
Sbjct: 107 WETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYT 166

Query: 164 TLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            L++ Y ++    +A+S   EM  + +C  D+ T +I+ID   +L       R F  ++K
Sbjct: 167 ALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRL-------RRFDLLKK 219

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
           +  D S +                             I  N VTYNT+I  +GK+   E+
Sbjct: 220 ILADMSCLG----------------------------ITCNTVTYNTIINGFGKAKMFEQ 251

Query: 283 ATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
             +L+ EM ++    P+ IT++T I  +G + ++++    +++ +  G+E D   Y +MI
Sbjct: 252 MESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMI 311

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
            +Y + G+    K +L+ + +    P  +   T I    RAG IEE    F+     G  
Sbjct: 312 SSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMK 371

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  ++  + ++     V  +  ++ ++   PD+ +   ++N YG+        +L
Sbjct: 372 PNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGEL 431

Query: 458 YSEMQEEGCVFSDQVHF----QMLSLYGARKDFNMLES 491
           + EM+E  CV  D + F    + L   G  +D   LE+
Sbjct: 432 FLEMKENKCV-PDGITFATMIRALKAQGMTEDAQRLEN 468



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 143/300 (47%), Gaps = 7/300 (2%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++++ +D +   +   P V  Y++++    R ++++L   +  +M   GI  +  TY+T+
Sbjct: 180 KAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTI 239

Query: 61  ITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           I  FGK  MF+   S L +M E D    DL+ ++  I          K    +   +  G
Sbjct: 240 INGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMG 299

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           I PD+  YN+MI+ +GKA ++ + + ++  M ++   P  V+ +T+++ +       E  
Sbjct: 300 IEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEME 359

Query: 180 SVFAEMN-EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             F  M  +   P  +T C+ +++ YG+    +  D +   +    + P    +N L+ V
Sbjct: 360 EYFKNMKFQGMKPNSVTYCS-LVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINV 418

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG+A    +   LF  M+  +   + +T+ TMI    ++L+ +  T   Q ++N+ I  N
Sbjct: 419 YGQAGNVRKMGELFLEMKENKCVPDGITFATMI----RALKAQGMTEDAQRLENKLIATN 474



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/317 (18%), Positives = 139/317 (43%), Gaps = 6/317 (1%)

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           +P   +Y  LL + G+ +   +A  LF +M  + ++ ++  Y  ++  YG+S    KA +
Sbjct: 124 EPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAIS 183

Query: 286 LMQEMQN-RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            + EM++    +P+  TYS +I    +  + D    +   +   G+  + V Y T+I  +
Sbjct: 184 TVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGF 243

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRE-----TAITILARAGRIEEATWVFRQAFDAGEVKD 399
            +  +    + LL E+ + ++ P +     T I     + +IE+    +++    G   D
Sbjct: 244 GKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPD 303

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           I  +  MI  + +   Y  +  V   M    + P    +  +++S+G+    E  ++ + 
Sbjct: 304 IWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFK 363

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            M+ +G   +   +  +++ YG   D   ++S+  ++++   +    L + +  +Y +A 
Sbjct: 364 NMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAG 423

Query: 520 RLNDASRIMNRMNKRRT 536
            +     +   M + + 
Sbjct: 424 NVRKMGELFLEMKENKC 440


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 224/476 (47%), Gaps = 13/476 (2%)

Query: 6   LDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           ++++N   +Y  SP    YN +L  + +  +   A  L  +M+ RG+ P+R TY+ L+  
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           + K G    A + ++ M Q+ +  D+  Y+ LI          +A  +   +++  ++PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V+YNT+IN   +     EA  L+EEM E+GVKP+ V+++ ++  Y +  K  +A +   
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M E     D  T N +I+ Y +     +A R    M +  +    V+ NT+LR     +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  L    +++    + V+Y T+I  Y K    ++A  L  EM+ + I P+ +TY+
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            II    + GK ++A     +L  SG+  D   Y T++  Y R G V  A +  +++ + 
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           +  P      IL R     G +E+A  +F      G+  D   +  +I    +  +  + 
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 420 IEVFEKMRSAGYFPDSHI---IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
             +  +M      PD +    I   L   G++RE   A++  S+M E+G    DQV
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE---AEEFMSKMLEKG-NLPDQV 699



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 206/452 (45%), Gaps = 4/452 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +N+V+       +++ A    + M +   +PD  TY+T++    K+G    A   
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M+   +  +   Y+ L+    K+    +A ++   +  + ++PD+  YN +IN    
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L +EM    + PD VSY+TL+N  +E  K  EA  +  EM+E     +  T
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIM+  Y +     DA      M + G  P  V+YNTL+  Y +A   GEA      M 
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK ++ + VT NT+++   +  + E+A  L+   + RG   + ++Y T+I  + K G +D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-TIL 375
           RA  L+ +++   +    V Y  +I    + G    A   L+EL +   +P ET   TIL
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R G +E+A     +  +     D+     ++            +++F    S G  
Sbjct: 566 HGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKA 625

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            D+     ++ S  K    + A +L SEM+E+
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 207/438 (47%), Gaps = 11/438 (2%)

Query: 14  RYSPSVFAYNVVLRNVLR---AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           R  P++   N +L +++R   +     +   F++  + GI P+  T++ +I  +  E  F
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF 224

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +L  M +   S D V Y+ +++   K      A  +   +KS G++P+   YN +
Sbjct: 225 KDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  + K    KEA  +IE M +  + PD  +Y+ L+N      +  EA  +  EM  +  
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 191 PLDLTTCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
             D+ + N +I+  G L+ +K  +A +L   M + G+ P+ V++N +++ Y +     +A
Sbjct: 345 LPDVVSYNTLIN--GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +    M+      + VTYNT+I  Y K+    +A   M EM  + ++ +++T +TI+  
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             +  KL+ A  L    R  G  ID V Y T+IV Y + G V  A +L  E+++    P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T+     I  L + G+ E+A     +  ++G + D + +  ++  + R        +   
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 425 KMRSAGYFPDSHIIALVL 442
           KM    + PD     ++L
Sbjct: 583 KMVENSFKPDVFTCNILL 600



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 185/420 (44%), Gaps = 42/420 (10%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINV---FGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           A  IF ++K   + P+L+  NT++N    +  +     +R    +  + G+ P+  +++ 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           ++  Y   +KF +A+     M + NC  D  T N ++D   +     DA  L   M+  G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ---------------------------- 256
           + P+  +YN L+  Y +     EA ++  LM                             
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 257 --RKEIEQ-----NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             R E+E      +VV+YNT+I    +  +  +A  L++EM  +G++PNA+T++ ++  +
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----T 365
            K GK+D A+    K+  SG   D V Y T+I  Y + G +  A R + E+ + N    +
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T +  L R  ++EEA  +   A   G   D   +G +I  + ++      ++++++
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+     P +     ++    +  + E A    +E+ E G +  +  +  +L  Y    D
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 146/325 (44%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+   +N++++   +  + + A     +M + G +PD  TY+TLI  + K G   
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   + +M +  +  D V  + ++    +     +A  + S  +  G   D V+Y T+I
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             + K      A  L +EM+E+ + P TV+Y+ ++    +  K  +A+S   E+ E    
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D TT N ++  Y +    + A +    M +    P V + N LLR      +  +A+ L
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKL 615

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F     K    + VTYNT+I    K    + A NL+ EM+ + + P+  TY+ II     
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVL 336
           +G++  A     K+   G   D VL
Sbjct: 676 SGRIREAEEFMSKMLEKGNLPDQVL 700



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 32/376 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE+ +SP    YN ++    +A     A    DEM ++ +  D  T +T++    +E   
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   L    +     D V Y  LI    K  +  +A+ ++  +K   I+P  V YN +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    +    ++A   + E+ E G+ PD  +Y+T+L+ Y       +A     +M E + 
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLF--WSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
             D+ TCNI++       + + A +LF  W  +   ID   V+YNTL+    +     +A
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID--TVTYNTLITSLCKEGRLDDA 647

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN---------- 298
            +L   M+ KE+  +  TYN +I     S    +A   M +M  +G  P+          
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNET 707

Query: 299 -------------AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
                        ++ YS  I      GK   A  +F + +  G+ +D   Y  ++    
Sbjct: 708 VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM---- 763

Query: 346 RVGLVAHAKRLLHELR 361
             GL+   K +  E R
Sbjct: 764 -DGLIKRRKSISKEAR 778



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 11/312 (3%)

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDA 213
           P      T +  YV++ +   A  +F +M  +    +L TCN +++    Y        +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
              F    K+GI P+V ++N ++  Y     F +A+    +M +     + VTYNT++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             K      A +L+ +M++RG+ PN  TY+ ++  + K G L  AA + + +  + +  D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
              Y  +I      G +  A +L  E+      P+ +   T I       +I EA  +  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL- 448
           +  + G   +      M++ + +  K  +      KM  +G+ PD      ++N Y K  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 449 ---REFETADDL 457
                F T D++
Sbjct: 433 NMGEAFRTMDEM 444



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 52/358 (14%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM---------------- 270
           PS    +T +  Y ++     A  +F+ M+R  +  N++T NT+                
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 271 --------------------IKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAI 308
                               I IYG  LE+  + A   +  M      P+ +TY+TI+  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             K G+L  A  L   ++S G+  +   Y  ++  Y ++G +  A  ++  + Q N +P 
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                  I  L   GRIEEA  +  +  +   + D+  +  +I       K +   ++ E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLSLYGAR 483
           +M   G  P++    +++  Y K  + + A +  ++M+E G  FS D V +  L + G  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG--FSPDCVTYNTL-INGYC 429

Query: 484 KDFNMLESLFERLDSDSNINKK----ELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           K  NM E+ F  +D     N K     L+ ++  +  R  +L +A ++++   KR  F
Sbjct: 430 KAGNMGEA-FRTMDEMGRKNMKMDSVTLNTILRTLC-REKKLEEAYKLLSSARKRGYF 485


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 221/452 (48%), Gaps = 4/452 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V +YN+V+  V +  + + AH L   M  +G  PD  +YST++  + + G  D     +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M++  +  +  +Y ++I L  ++   ++A   FS +   GI+PD V Y T+I+ F K 
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + A     EM  + + PD ++Y+ +++ + +    VEA  +F EM       D  T 
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +I+ Y +    KDA R+   M + G  P+VV+Y TL+    +      A  L   M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++ N+ TYN+++    KS   E+A  L+ E +  G+  + +TY+T++  + K+G++D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  + +++   G++   V +  ++  +   G++   ++LL+ +      P  T    L +
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604

Query: 378 A----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                  ++ AT +++     G   D   +  +++   + +       +F++M+  G+  
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                ++++  + K ++F  A +++ +M+ EG
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 214/453 (47%), Gaps = 4/453 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+P V +Y+ V+    R  + +    L + M+++G+ P+ Y Y ++I    +      A 
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M +  +  D V+Y+ LI+   K  D   A   F  + S  I PD++ Y  +I+ F
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +     EA  L  EM  +G++PD+V+++ L+N Y +     +A  V   M +  C  ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +ID   +      A+ L   M K+G+ P++ +YN+++    ++    EA+ L   
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +   +  + VTY T++  Y KS E +KA  +++EM  +G++P  +T++ ++  +   G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE-RVGLVAHA---KRLLHELRQPNTIPRET 370
           L+    L   + + G+  +   + +++  Y  R  L A     K +      P+    E 
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +    +A  ++EA ++F++    G    +S +  +I+ F + KK+    EVF++MR  G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
              D  I     ++  K +  +T  D   E+ E
Sbjct: 697 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 4/471 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F E  + G+  +  +Y+ +I    + G    A   L  ME    + D++ YS ++    
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +  +  K   +   +K  G+ P+   Y ++I +  +     EA     EM  QG+ PDTV
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+TL++ + +      A   F EM+  +   D+ T   +I  + Q+    +A +LF  M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G++P  V++  L+  Y +A    +A  +   M +     NVVTY T+I    K  + 
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  L+ EM   G++PN  TY++I+    K+G ++ A  L  +  ++G+  D V Y T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 341 IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           + AY + G +  A+ +L E+     QP  +     +      G +E+   +       G 
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             + + F  +++ +           +++ M S G  PD      ++  + K R  + A  
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
           L+ EM+ +G   S   +  ++  +  RK F     +F+++  +     KE+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 122/247 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  SP+V  Y  ++  + +    + A+ L  EM + G+ P+ +TY++++    K G  +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  + + E   ++ D V Y+ L++   K  +  KA  I   +   G+ P +V +N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F    + ++   L+  M  +G+ P+  ++++L+  Y   +    A +++ +M      
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   ++  + +    K+A  LF  M+  G   SV +Y+ L++ + + + F EA  +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688

Query: 252 FRLMQRK 258
           F  M+R+
Sbjct: 689 FDQMRRE 695



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 83/175 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +     Y  ++    ++ + + A  +  EM  +G+ P   T++ L+  F   GM 
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +     L  M    ++ +   +++L++     ++   A +I+  + S G+ PD   Y  +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +    KA+  KEA  L +EM+ +G      +YS L+  +++  KF+EA  VF +M
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 210/459 (45%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P++  Y+VV+  + RA   + A  L   M  +G+ PD Y Y+TLI  F ++   
Sbjct: 259 EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRS 318

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               S L +M    +  D V Y+ LI    K SD   A  +   + +  I  +   Y  +
Sbjct: 319 TEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYAL 378

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    ++A  L  EM   G+KPD  +Y+ L+  Y +     +A  +  E+ + N 
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +   C  +++          A+ LF  M   G+ P++V Y T+++   +   F EAI 
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIK 498

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +  +M+ + +  +V  YNT+I  + K+ + E+  + + EM  +G++PN  TY   I  + 
Sbjct: 499 ILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTI 366
           +AG++  A   F ++  SG+  + V+   +I  Y + G    A    + +L +   P+  
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L++ G+++EA  VF +  D G V D+  +  +I    +        E+ + M
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              G  P+      ++N   KL E   A +L+  + E+G
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 210/449 (46%), Gaps = 5/449 (1%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N + +++L+  + EL   ++  M    I PD YTY+ LI  + + G  +     L  ME+
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEE 260

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                +LV YS +I    +  D  +A+ +   + + G++PD   Y T+I+ F + K   E
Sbjct: 261 KGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
            + +++EM   G+KPD V+Y+ L+N +V+      A  V  EM      L+  T   +I 
Sbjct: 321 GKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIH 380

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
              ++   + A+ LF  M  MGI P + +YN L+  Y + +   +A  L   ++++ +  
Sbjct: 381 GLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTA 440

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           N      ++       +  +A  L QEM + G++PN + Y+TI+    K G+ + A  + 
Sbjct: 441 NAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL 500

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARA 378
             ++  G+  D   Y T+I+ + + G +   K  L E+     +PN       I    RA
Sbjct: 501 GVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRA 560

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G ++ A   F +  D+G   +  +   +I+ + ++         F  M   G  PD    
Sbjct: 561 GEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTH 620

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +++++   K  + + A  ++SE+ ++G V
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLV 649



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 201/451 (44%), Gaps = 5/451 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  YN ++    + +  E A+ L  E+++  +  + Y    ++      G    A   
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M    +  ++V+Y+ +++   K   + +AI I   +K  G+ PD+  YNT+I  F K
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   +E +  + EM  +G+KP+  +Y   ++ Y    +   A   F EM +     +   
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           C  +ID Y +      A   F  M   G+ P V +++ L+    +     EA+ +F  + 
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  +V TY ++I    K  + + A  L  +M  +GI PN +TY+ +I    K G++ 
Sbjct: 645 DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIA 704

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  LF  +   G+  + V Y T+I  Y +   +  A +L H ++     P++      I
Sbjct: 705 KARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +AG  E+A  +F    + G +     F  +I+ F +  K     ++ E M      
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           P+     +++  +  +   + A+ L+ EMQ+
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQK 854



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 232/521 (44%), Gaps = 42/521 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF YN V+    +A + E       EM  +G+ P+ YTY   I  + + G   +A  
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    ++ + V+ ++LI+   K  + +KA + F  +   G++PD+  ++ +I+   
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDL 194
           K    +EA  +  E+ ++G+ PD  +Y++L+ NL  E                     DL
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG--------------------DL 668

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                           K A  L   M K GI+P++V+YN L+    +     +A  LF  
Sbjct: 669 ----------------KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDG 712

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  K + +N VTY+T+I  Y KS    +A  L   M+  G+ P++  Y  +I    KAG 
Sbjct: 713 IPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGN 772

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            ++A  LF  +   G+   P  +  +I  + ++G +  A +L+ ++   +  P     TI
Sbjct: 773 TEKALSLFLGMVEEGIASTPA-FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L       G I+EA  +F +      + ++  +  ++  ++R  + + +  +F++M + G
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD    +++++++ K   +  A  L  +M  EG      ++  ++       + + + 
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL 951

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            + + ++   +         +   + RA R ++A R++  M
Sbjct: 952 KVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 197/488 (40%), Gaps = 39/488 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y  ++    R K+      + DEM   G+ PD   Y+ LI  F K+     A   
Sbjct: 300 PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQV 359

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M   ++  +   Y  LI    K+ D  KA  +FS +   GI PD+  YN +I  + K
Sbjct: 360 KEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYK 419

Query: 137 AKLFKEA-RLLIE----------------------------------EMREQGVKPDTVS 161
            +  ++A  LLIE                                  EM   G+KP+ V 
Sbjct: 420 VQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVI 479

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+T++   V+  +F EA+ +   M +     D+   N +I  + +    ++       M 
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P+V +Y   +  Y  A     A   F  M    I  N V    +I  Y K     
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA    + M ++G+ P+  T+S +I    K GKL  A  +F +L   G+  D   Y ++I
Sbjct: 600 KAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLI 659

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               + G +  A  L  ++ +    PN +     I  L + G I +A  +F    + G  
Sbjct: 660 SNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLA 719

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           ++   +  +I  + ++       ++F  M+  G  PDS +   +++   K    E A  L
Sbjct: 720 RNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSL 779

Query: 458 YSEMQEEG 465
           +  M EEG
Sbjct: 780 FLGMVEEG 787



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 17/314 (5%)

Query: 162 YSTLLNLYVENHKFVEALSVF--AEMNEVNCPLDLTTCNIMIDVYGQLDMAK-DADRLFW 218
           +  L+++Y +     EA+SVF  A+ NE    + L  CN +       D+ K +   LFW
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEF--IVGLACCNSL-----SKDLLKGNRVELFW 218

Query: 219 SMRK---MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            + K     I P V +Y  L+  Y       E  H+   M+ K    N+VTY+ +I    
Sbjct: 219 KVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLC 278

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           ++ + ++A  L + M N+G+ P+   Y+T+I  + +  +      +  ++ + G++ D V
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y  +I  + +   +  A ++  E+     + NT      I  L + G +E+A  +F + 
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   DI  + C+IE + + +      E+  +++      ++++   ++N      + 
Sbjct: 399 TMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDL 458

Query: 452 ETADDLYSEMQEEG 465
             A++L+ EM   G
Sbjct: 459 TRANELFQEMISWG 472



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 118/243 (48%), Gaps = 5/243 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F Y  ++    +A   E A  LF  M + GIA     ++ LI  F K G    A   
Sbjct: 755 PDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQL 813

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ M  + ++ + V Y+ LIE    + +  +A  +F  ++   ++P+++ Y ++++ + +
Sbjct: 814 VEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNR 873

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNCPLDL 194
                E   L +EM  +G+KPD +++S +++ +++   +++AL +  +M    VN   +L
Sbjct: 874 IGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL 933

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I+ID   + +   +  ++   + K G   S+ +  TL+  +  A    EA+ +   
Sbjct: 934 YT--ILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLES 991

Query: 255 MQR 257
           M R
Sbjct: 992 MVR 994


>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1285

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 243/557 (43%), Gaps = 54/557 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG----LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P + ++N ++    RAK   LA G    L  E+RQ G+ PD  TY+TLI+   +    D 
Sbjct: 96  PDLVSFNTLINA--RAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDD 153

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++  ++M       DL  Y+ ++ +  +      A  +F  L   G  PD V YN+++ 
Sbjct: 154 AVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLY 213

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K         + EE+   G K D ++Y+T++++Y +  +   AL ++ EM  + C  
Sbjct: 214 AFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTP 273

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T  ++ID  G++D   DA ++   M   G+ P++V+++ L+  Y +     EA+  F
Sbjct: 274 DAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTF 333

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M    ++ + + Y  M+ I  +S +  K   L Q M N G  P+   Y  ++A   K 
Sbjct: 334 SHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKG 393

Query: 313 GKLD-------------------------------RAAMLFQKLRSSGVEIDPVLYQTMI 341
            + D                               + A L +K    G E D     +++
Sbjct: 394 NEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSLLSIL 453

Query: 342 VAYERVGLVAHAKRLLHELRQ--PNT--IPRETAITILARAGRIEEATWVFR--QAFDAG 395
            AYE  G       LL  +R+  P++  +  E +I +L +  +I  A   +   Q    G
Sbjct: 454 DAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCG 513

Query: 396 EV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
              +D +++  +I      + +    +VF  M+  G  P   I   ++++Y KL   ETA
Sbjct: 514 SFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETA 573

Query: 455 DDLYSEMQEEGC---VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK---ELH 508
             L  E  + G    + S +V   M+  YG  K +   E+  + L  + +I+++    L 
Sbjct: 574 HQLMDEAVQSGISLNILSSRV--TMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALI 631

Query: 509 HVVA--GIYERANRLND 523
           H  A  G+YE A  + D
Sbjct: 632 HAYAESGLYEHARAVFD 648



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 174/342 (50%), Gaps = 6/342 (1%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV--EALSVFAE 184
           +N M+ V+ ++  F + R L++ MR Q ++PD VS++TL+N   ++       A  +  E
Sbjct: 66  FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLE 125

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           + +V    D+ T N +I    Q     DA  +F  M      P + +YN ++ V+G    
Sbjct: 126 VRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGK 185

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  +FR +  K  + + VTYN+++  + K  + +    + +E+   G + + ITY+T
Sbjct: 186 AQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNT 245

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           +I ++GK G+LD A  L+ ++R+ G   D V Y  +I +  ++  ++ A ++L E+    
Sbjct: 246 MIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAG 305

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P  +     I   A+ GR EEA   F     +G   D   +  M+++ +R+     ++
Sbjct: 306 LKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLM 365

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +++ M + GY PD+ +  ++L +  K  E++  + +  +M+
Sbjct: 366 ALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 177/367 (48%), Gaps = 6/367 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N ++     +  +E A  +FD M ++G  P   + + ++     +G  D     +Q++ 
Sbjct: 627 WNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQEL- 685

Query: 82  QD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QD   ++S   V+   +++   K  D  + + I++ +K +G +P++  Y +MI++  + K
Sbjct: 686 QDMGFKISKSTVIL--MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNK 743

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            +++  L++ EM   G +PD    +TLL +Y  N  F + + V+  + E     +  T N
Sbjct: 744 RYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYN 803

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I +Y +    ++   L   M K G+ P + SY +LL   G+A+L+ +A  LF  ++ K
Sbjct: 804 TLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSK 863

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N   Y+ ++KIY  +  H KA  L+  M+  GIEP   T   ++  +G AG  D A
Sbjct: 864 GYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEA 923

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             +   L+SS +E+  + Y T+  AY + G        L E++     P     T   RA
Sbjct: 924 EKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRA 983

Query: 379 GRIEEAT 385
             + E T
Sbjct: 984 ASLCERT 990



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 156/666 (23%), Positives = 250/666 (37%), Gaps = 147/666 (22%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A +      YN ++    +  + +LA GL+DEMR  G  PD  TY+ LI   GK      
Sbjct: 234 AGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISD 293

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA------ 126
           A   L++M    +   LV +S LI    K     +A+  FS + +SG+ PD +A      
Sbjct: 294 AGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLD 353

Query: 127 --------------YNTMIN---------------------------------------- 132
                         Y TM+N                                        
Sbjct: 354 IIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMN 413

Query: 133 ------VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
                 +  KA+   +   L+++   QG +PD+ S  ++L+ Y    K  E LS+   + 
Sbjct: 414 PQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIR 473

Query: 187 E---VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEA 242
           E    +C L ++ C+IM+    Q   A   +     M K G        Y  L+    EA
Sbjct: 474 EHVPSSCNL-ISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEA 532

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           E F EA  +F  MQ   IE +   Y +MI  Y K    E A  LM E    GI  N ++ 
Sbjct: 533 EFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSS 592

Query: 303 S-TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
             T+I  +GK  KL + A  F K       ID  ++  +I AY   GL  HA+ +   + 
Sbjct: 593 RVTMIEAYGKI-KLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMI 651

Query: 362 QPNTIP------------------------------------RETAITIL---ARAGRIE 382
           +   +P                                    + T I +L    +AG I 
Sbjct: 652 EKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIF 711

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           E   ++    +AG + ++ ++  MI L  RNK+Y +V  +  +M  AG+ PD  I+  +L
Sbjct: 712 EVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLL 771

Query: 443 NSYGKLREFETADDLY-----------------------------------SEMQEEGCV 467
             Y     F+   ++Y                                   +EM ++G  
Sbjct: 772 LMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLT 831

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
              + +  +L+  G  K +   E LFE + S      + L+H++  IY  A   + A ++
Sbjct: 832 PKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQL 891

Query: 528 MNRMNK 533
           +  M +
Sbjct: 892 LASMKE 897



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 194/426 (45%), Gaps = 6/426 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS-TLITCFGKEGMFDSAIS 75
           PS   Y  ++    +    E AH L DE  Q GI+ +  +   T+I  +GK  ++  A +
Sbjct: 552 PSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAEN 611

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +++ ++Q+  S D  +++ LI    +   Y  A ++F  +   G +P + + N M+    
Sbjct: 612 FVKGLKQEP-SIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALI 670

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 E  ++++E+++ G K    +   +L+ + +     E + ++  M E     ++ 
Sbjct: 671 IDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMH 730

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               MI +  +    +D + +   M + G +P +   NTLL +Y     F + + ++  +
Sbjct: 731 IYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSI 790

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +E N  TYNT+I +Y ++L  E+   L+ EM  +G+ P   +Y +++A  GKA   
Sbjct: 791 LEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLW 850

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           ++A  LF+++RS G  ++  LY  ++  Y      + A++LL  +++    P    + IL
Sbjct: 851 EQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHIL 910

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                 AG  +EA  V      +        +  +   + +N  Y   I    +M++ G 
Sbjct: 911 MTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGV 970

Query: 432 FPDSHI 437
            PD  +
Sbjct: 971 KPDHQV 976



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS--LEHEKATN 285
           +V  +N ++ VY  +  F +   L   M+ +E+E ++V++NT+I    KS  L    A +
Sbjct: 62  TVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFD 121

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L+ E++  G+ P+ ITY+T+I+   +   LD A  +F+++ +S    D   Y  M+  + 
Sbjct: 122 LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHG 181

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           R G    A+R+  EL +    P+ +   + +   A+ G  +    V  +   AG  KD  
Sbjct: 182 RCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGI 241

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  MI ++ +  +    + ++++MR+ G  PD+    ++++S GK+     A  +  EM
Sbjct: 242 TYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEM 301

Query: 462 QEEG 465
            + G
Sbjct: 302 ADAG 305



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/494 (18%), Positives = 217/494 (43%), Gaps = 13/494 (2%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELAR--KLSD 104
           +G  PD  +  +++  +   G  +  +S LQ + E    S +L+   +++ L +  K++ 
Sbjct: 440 QGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAA 499

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +  S    LK      D   Y  +I    +A+ F EA  +  +M+  G++P    Y +
Sbjct: 500 AMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYES 559

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI-MIDVYGQLDMAKDADRLFWSMRKM 223
           +++ Y +      A  +  E  +    L++ +  + MI+ YG++ + + A+     +++ 
Sbjct: 560 MISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQ- 618

Query: 224 GIDPSVVS--YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             +PS+    +N L+  Y E+ L+  A  +F +M  K     + + N M++        +
Sbjct: 619 --EPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLD 676

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +   ++QE+Q+ G + +  T   ++  + KAG +     ++  ++ +G   +  +Y++MI
Sbjct: 677 ELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMI 736

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               R       + ++ E+     +P+     T + +    G  ++   V+    +AG  
Sbjct: 737 SLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLE 796

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  +I ++SRN +      +  +M   G  P       +L + GK + +E A+ L
Sbjct: 797 PNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQL 856

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           + E++ +G   +  ++  ++ +Y    + +  E L   +  D         H++   Y  
Sbjct: 857 FEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGT 916

Query: 518 ANRLNDASRIMNRM 531
           A   ++A +++N +
Sbjct: 917 AGHPDEAEKVLNSL 930



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 118/636 (18%), Positives = 240/636 (37%), Gaps = 118/636 (18%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P    YN +L    +    +    + +E+ + G   D  TY+T+I  +GK G  D
Sbjct: 198 EKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLD 257

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +M     + D V Y+ LI+   K+   S A  +   +  +G+ P LV ++ +I
Sbjct: 258 LALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALI 317

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             + K    +EA      M   GVKPD ++Y  +L++   +    + ++++  M      
Sbjct: 318 CAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYR 377

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIH 250
            D     +M+    + +   + + +   M  +  ++P +VS      +  +AE   +   
Sbjct: 378 PDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS-----SILIKAECISQGAK 432

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-------------------- 290
           L +    +  E +  +  +++  Y  + +HE+  +L+Q +                    
Sbjct: 433 LLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLC 492

Query: 291 QNRGIEPNAITYST------------------IIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           +N+ I      YS+                  +I    +A     A+ +F  ++  G+E 
Sbjct: 493 KNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEP 552

Query: 333 DPVLYQTMIVAYERVG------------------------------------LVAHAKRL 356
              +Y++MI AY ++G                                    L  HA+  
Sbjct: 553 SRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENF 612

Query: 357 LHELRQPNTIPRE---TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           +  L+Q  +I R      I   A +G  E A  VF    + G +  I     M+     +
Sbjct: 613 VKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIID 672

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            +   +  + ++++  G+      + L+L+++ K  +      +Y+ M+E G + +  ++
Sbjct: 673 GRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIY 732

Query: 474 FQMLSLY-------------------GARKDFNMLESLFERLDSDSNINKK-ELHHVV-- 511
             M+SL                    G   D  +L +L      + N +K  E++H +  
Sbjct: 733 RSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILE 792

Query: 512 AGI-------------YERANRLNDASRIMNRMNKR 534
           AG+             Y R  R  +   ++N M K+
Sbjct: 793 AGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKK 828



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 110/229 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA Y P++  Y  ++  + R K++     +  EM + G  PD    +TL+  +   G F
Sbjct: 721 KEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNF 780

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D  +     + +  +  +   Y+ LI +  +     +  ++ + +   G+ P L +Y ++
Sbjct: 781 DKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSL 840

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +   GKAKL+++A  L EE+R +G + +   Y  L+ +Y +     +A  + A M E   
Sbjct: 841 LAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGI 900

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
              + T +I++  YG      +A+++  S++   ++ S + Y+T+   Y
Sbjct: 901 EPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAY 949



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 7/221 (3%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-- 320
            V  +N M+ +Y +S   +    L+  M+ + +EP+ ++++T+I    K+G L   +   
Sbjct: 62  TVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFD 121

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
           L  ++R  G+  D + Y T+I A  +   +  A  +  E+     +P+       +++  
Sbjct: 122 LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHG 181

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G+ ++A  +FR+  + G   D   +  ++  F++      V  V E++  AG+  D  
Sbjct: 182 RCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGI 241

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
               +++ YGK+   + A  LY EM+  GC   D V + +L
Sbjct: 242 TYNTMIHMYGKMGRLDLALGLYDEMRALGCT-PDAVTYTVL 281



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 95/215 (44%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            EA   P+   YN ++    R  + E    L +EM ++G+ P   +Y +L+   GK  +++
Sbjct: 792  EAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWE 851

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    +++       +  LY  L+++ R   ++SKA  + + +K  GI P +   + ++
Sbjct: 852  QAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILM 911

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              +G A    EA  ++  ++   ++  T+ YST+ N Y++N  +   ++   EM      
Sbjct: 912  TSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVK 971

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             D       I      +   DA  L  S+R    D
Sbjct: 972  PDHQVWTCFIRAASLCERTADAILLLNSLRDCEFD 1006


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 228/492 (46%), Gaps = 12/492 (2%)

Query: 1   RSVAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           + V   D +N   +    PS+F YN ++ ++ +  +++ A  LF EM ++G+  +  TYS
Sbjct: 346 KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYS 405

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
            LI  F + G  D+AI +L +M    +   +  Y++LI    KL + S A+S F  +   
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P +V+Y ++I+ +       EA  L  EM  +G+ P+T +++TL++     ++  +A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +F EM E N   +  T N+MI+ + +      A  L   M + G+ P   +Y  L+  
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
                   EA      + R+  + N + Y+ ++  Y K      A  + +EM  RG++ +
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645

Query: 299 AITYSTIIAIWGKAGKLDRAAM--LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA--- 353
            + Y+ +I   G   + D +A+  L + +    +  D V+Y +MI  Y + G V  A   
Sbjct: 646 LVCYAVLID--GTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703

Query: 354 -KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
              ++ E   PN +   T I  L +AG +++A  ++++   +    +   + C ++  +R
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
                  +++   M   G   ++    +++  + KL   E A  L  EM +   +F D +
Sbjct: 764 EGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA-IFPDCI 821

Query: 473 HFQMLSLYGARK 484
            +  +     R+
Sbjct: 822 TYSTIIYQCCRR 833



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 8/455 (1%)

Query: 18  SVFAYNVVLRNVLRAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           +V  YNV++  + + K+ WE A  + + + Q+G+     TY TL+    K   F+     
Sbjct: 260 NVVVYNVLIHGLCKNKRVWE-AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGV 318

Query: 77  LQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + +M E   V  +  L S+L+E  R+      A  + +R+K  G +P L  YN +IN   
Sbjct: 319 MDEMIELGFVPTEAAL-SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   F EA LL +EM E+G+  + V+YS L++ +    K   A+    +M      + + 
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I+ + +L     A   F  M   G+ P+VVSY +L+  Y       EA  L+  M
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N  T+ T+I    ++     A  L  EM  + + PN +TY+ +I    K G  
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A  L  ++   G+  D   Y+ +I +    G V  AK+ + +L + +    E   + L
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + GR+ +A  V R+    G   D+  +  +I+   + +  + V  + + M     
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            PD  I   +++ Y K    + A  ++  M +EGC
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC 712



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 212/474 (44%), Gaps = 5/474 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V+ YN ++    +      A   FDEM  +G+ P   +Y++LI+ +  +G    A    
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY 494

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M    ++ +   ++ LI    + +  + A  +F  +    ++P+ V YN MI    K 
Sbjct: 495 HEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKE 554

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               +A  L+ +M ++G+ PDT +Y  L++      +  EA     +++  +  L+    
Sbjct: 555 GNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCY 614

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + ++  Y +    +DA  +   M K G+D  +V Y  L+    + +       L + M  
Sbjct: 615 SALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHD 674

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  + V Y +MI  Y K+   +KA  +   M + G  PN +TY+T+I    KAG +D+
Sbjct: 675 QRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDK 734

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITI 374
           A +L++++  S    + V Y   +    R G +  A +L +++ +    NT+     +  
Sbjct: 735 AELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRG 794

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             + GR+EEAT +  +  D     D   +  +I    R       IE ++ M + G  PD
Sbjct: 795 FCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPD 854

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +     ++       E   A +L  +M   G V  +Q   + LS +GA + F++
Sbjct: 855 TLAYNFLIYGCCIAGELGKAFELRDDMIRRG-VKPNQATHKSLS-HGASRKFSI 906



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 176/424 (41%), Gaps = 69/424 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y  ++       +   A  L+ EM  +GIAP+ YT++TLI+   +      A   
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRL 528

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  +  + V Y+ +IE   K  +  KA  + +++   G+VPD   Y  +I+    
Sbjct: 529 FDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCS 588

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA+  I+++  +  K + + YS LL+ Y +  +  +AL V  EM +    +DL  
Sbjct: 589 TGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVC 648

Query: 197 CNIMID----------VYGQLDMAKD----ADRLFWS---------------------MR 221
             ++ID          V+G L    D     D++ ++                     M 
Sbjct: 649 YAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMI 708

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM-------------------------- 255
             G  P++V+Y TL+    +A L  +A  L++ M                          
Sbjct: 709 DEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSME 768

Query: 256 --------QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
                     K +  N V+YN +++ + K    E+AT L+ EM +  I P+ ITYSTII 
Sbjct: 769 KAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIY 828

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              + G LD A   +  + + G++ D + Y  +I      G +  A  L  ++ +    P
Sbjct: 829 QCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKP 888

Query: 368 RETA 371
            +  
Sbjct: 889 NQAT 892



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/569 (18%), Positives = 234/569 (41%), Gaps = 60/569 (10%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
            +++     ++ S  ++ +++  ++ A  +  A  L   +  RG    R  +  L+ CF 
Sbjct: 92  FNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFE 151

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K   F S++ +           DL++ S + E  +++ D   ++ IF  ++   ++P + 
Sbjct: 152 KCD-FISSLGF-----------DLLIQSYVQE--KRMFD---SVLIFRLMRQCELMPQVR 194

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
               ++N   K +      +L  E+   G++PD   Y  ++  + E   F +A  +   M
Sbjct: 195 TLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM 254

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
              +  L++   N++I    +     +A  +   + + G+  S V+Y TL+    + + F
Sbjct: 255 ESSD--LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 246 --------------------------------GEAIHLFRLMQR-KEIE--QNVVTYNTM 270
                                           G+ +  F L+ R K++    ++  YN +
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    K  + ++A  L +EM  +G+  N +TYS +I  + + GKLD A     K+  +G+
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATW 386
           +I    Y ++I  + ++G ++ A     E+     +P  +   + I+     G++ EA  
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           ++ +    G   +   F  +I    R  +  +   +F++M      P+     +++  + 
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHC 552

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS-NINKK 505
           K      A +L ++M ++G V     +  ++S   +       +   + L  +   +N+ 
Sbjct: 553 KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMNKR 534
               ++ G Y +  RL DA  +   M KR
Sbjct: 613 CYSALLHG-YCKEGRLRDALGVCREMVKR 640


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---- 72
           P V  +N +++ + RA Q   A  + +EM  RG+APD  T++TL+  F +EG  ++    
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 73  -------------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                          A+ ++QQ   D    D + Y+  +    +
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A+ +   +   G  PD+  YN ++N   K    +EA+ ++ +M ++G  PD  +
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  ++       D+ T NI+I+   ++     A RLF  M+
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YNTL+         G+A+ L + M+     ++ +TYNT+I    K +  E
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  NAIT++T+I    K  K+D A  L  ++ S G++ + + Y +++
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  V R     G  
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +++   R     + + +F +M   G  PD+    +V        G ++E   
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKE--- 563

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM ++G +  FS    F+ML+
Sbjct: 564 AFDFMLEMVDKGFIPEFS---SFRMLA 587



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 211/466 (45%), Gaps = 41/466 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD--RVSGDLVLYSNLIEL 98
           L  EMR+ G         + +  +  + +FD A+  +    Q    +  D V+Y++L+ +
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             + S      S++S + + GI PD+V +NT++    +A   + A L++EEM  +GV PD
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA----- 213
             +++TL+  +VE      AL V A M E+ C     T N++I+ Y +L   +DA     
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183

Query: 214 ---------DRLFWS---------------------MRKMGIDPSVVSYNTLLRVYGEAE 243
                    D++ ++                     M + G DP V +YN ++    +  
Sbjct: 184 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  +   M  +    ++ T+NT+I         E+A +L +++  +G+ P+  T++
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 303

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I    K G    A  LF+++++SG   D V Y T+I     +G +  A  LL ++   
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363

Query: 364 ----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
               +TI   T I  L +  RIEEA  VF Q    G  ++   F  +I+   ++KK  + 
Sbjct: 364 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 423

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            E+  +M S G  P++     +L  Y K  + + A D+   M   G
Sbjct: 424 FELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+ ++ C
Sbjct: 179 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 238

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A   L QM       D+  ++ LI      +   +A+ +  ++   G+ PD
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K      A  L EEM+  G  PD V+Y+TL++      K  +AL +  
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+    + +
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N +TYN+++  Y K  + +KA ++++ M   G E + +TY 
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 478

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  + + +R  G+   P  Y  ++ +  R   +  A  L  E+ + 
Sbjct: 479 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 538

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVF 403
              P      I+ R      G I+EA     +  D G + + S F
Sbjct: 539 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 583



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 69/245 (28%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S +   +N ++  + + K+ + A  L ++M   G+ P+  TY++++T + K+G    A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI---- 131
            L+ M  +    D+V Y  LI    K      A+ +   ++  G+ P   AYN ++    
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 132 ---NVFGKAKLF-----------------------------KEARLLIEEMREQGVKPDT 159
              N+     LF                             KEA   + EM ++G  P+ 
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 580

Query: 160 VSY----STLLNL-----------------------------YVENHKFVEALSVFAEMN 186
            S+      LLNL                             Y++  KF +AL+ F    
Sbjct: 581 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 640

Query: 187 EVNCP 191
           E+N P
Sbjct: 641 EINNP 645


>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
 gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 209/465 (44%), Gaps = 35/465 (7%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + + +WI  ++ + P V  +N+++    +  Q++ A  L+ ++ +    P   TY+ LI 
Sbjct: 139 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 198

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLV---LYSNLIE-LARKLSDYSKAISIFSRLKSS 118
            +   G+ + A   L +M+   VS   +   +Y+  IE L ++  +  +AI +F R+K  
Sbjct: 199 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
              P    YN MIN++GKA     +  L  EMR    KP+  +Y+ L+N +       +A
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +F ++ E     D+   N +++ Y +      A  +F  M+ MG +P   SYN ++  
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG A L  +A  +F  M+R  I   + ++  ++  Y K+ +  K   +++EM   G+EP+
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
               ++++ ++G+ G+  +   +  ++ +     D   Y  +I  Y + G +   + L  
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           EL++ N  P              +  TW  R                 I  +SR K Y  
Sbjct: 499 ELKEKNFRP--------------DVVTWTSR-----------------IGAYSRKKLYVK 527

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            +EVFE+M  +G  PD     ++L++     + E    +   M +
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+   YN+++    +A +  ++  L+ EMR     P+  TY+ L+  F +EG+ + A
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               +Q+++D +  D+ +Y+ L+E   +      A  IFS ++  G  PD  +YN M++ 
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +G+A L  +A  + EEM+  G+ P   S+  LL+ Y +     +  ++  EM+E     D
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N M+++YG+L      +++   M        + +YN L+ +YG+A        LF 
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            ++ K    +VVT+ + I  Y +   + K   + +EM + G  P+  T   +++      
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 558

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++++   + + +   GV +  ++ + M
Sbjct: 559 QVEQVTSVLRTMH-KGVTVSSLVPKLM 584



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 182/388 (46%), Gaps = 10/388 (2%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D++ ++ LI+   +   Y +A S++ +L  S  VP    Y  +I  +  A L + A +++
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213

Query: 148 EEMREQGVKPDTVSYSTLLNLYVEN-----HKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
            EM+   V P T+   T+ N Y+E          EA+ VF  M    C     T N+MI+
Sbjct: 214 VEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
           +YG+   +  + +L+  MR     P++ +Y  L+  +    L  +A  +F  +Q   +E 
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +V  YN +++ Y ++     A  +   MQ+ G EP+  +Y+ ++  +G+AG    A  +F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           ++++  G+      +  ++ AY +   V   + ++ E+ +    P+T    + + +  R 
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G+  +   +  +  +     DIS +  +I ++ +      + E+F +++   + PD    
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGC 466
              + +Y + + +    +++ EM + GC
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGC 540



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 195/438 (44%), Gaps = 50/438 (11%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK--EARLLIEE--M 150
           ++   +K +D  K   +   L S+       +++ +INV  + +L K  ++ +L+ E  +
Sbjct: 92  ILSFIQKETDPDKVADVLGALPSTH-----ASWDDLINVSVQLRLNKKWDSIILVCEWIL 146

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R+   +PD + ++ L++ Y +  ++ EA S++ ++ E        T  ++I  Y    + 
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206

Query: 211 KDADRLFWSMRKMGIDPSVVS---YNT----LLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           + A+ +   M+   + P  +    YN     L++  G  E   EAI +F+ M+R   +  
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTE---EAIDVFQRMKRDRCKPT 263

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
             TYN MI +YGK+ +   +  L  EM++   +PN  TY+ ++  + + G  ++A  +F+
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 383
           +L+  G+E D  +Y  ++ +Y R G    A  +   ++     P                
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP---------------- 367

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
                          D + +  M++ + R   +++   VFE+M+  G  P      L+L+
Sbjct: 368 ---------------DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           +Y K R+    + +  EM E G      V   ML+LYG    F  +E +   +++     
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472

Query: 504 KKELHHVVAGIYERANRL 521
               ++++  IY +A  L
Sbjct: 473 DISTYNILINIYGKAGFL 490



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 12/344 (3%)

Query: 200 MIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +I+V  QL + K  D +     W +RK    P V+ +N L+  YG+   + EA  L+  +
Sbjct: 122 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 181

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST----IIAIWGK 311
                     TY  +IK Y  +   E+A  ++ EMQN  + P  I  +     I  +  +
Sbjct: 182 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G  + A  +FQ+++    +     Y  MI  Y +      + +L  E+R    +PN   
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +   AR G  E+A  +F Q  + G   D+ V+  ++E +SR        E+F  M+
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PD     +++++YG+      A+ ++ EM+  G   + + H  +LS Y   +D  
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             E++ + +  +       + + +  +Y R  +     +I+  M
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 7/269 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P V+ YN ++ +  RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +  ++M++  ++  +  +  L+    K  D +K  +I   +  +G+ PD    N+M
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++G+   F +   ++ EM       D  +Y+ L+N+Y +         +F E+ E N 
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T    I  Y +  +      +F  M   G  P   +   LL      E   +   
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565

Query: 251 LFRLMQRKEIEQNVVTYNTMI-KIYGKSL 278
           + R M +       VT ++++ K+  KSL
Sbjct: 566 VLRTMHKG------VTVSSLVPKLMAKSL 588


>gi|218192142|gb|EEC74569.1| hypothetical protein OsI_10130 [Oryza sativa Indica Group]
          Length = 823

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 253/523 (48%), Gaps = 32/523 (6%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I +W     R+  +V  YNVVL  V RA++W+L   L+ EM   G+APD  TY TL
Sbjct: 123 RAVEIFNWFRRRRRHEVNVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G    A+ WL  M +  +  D +  S ++++ +K  +Y KA   F R      
Sbjct: 183 IDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESD 242

Query: 121 VP-------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           V         L  YNT+I+ +GKA   ++      +M  +GV P+ V+++T+++++ ++ 
Sbjct: 243 VKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHR 302

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y +++    A+  F  M+   + P VVS  
Sbjct: 303 RMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCR 362

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  EA  L + M  + +  +  T + + ++Y  +   E+A    ++    
Sbjct: 363 TLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWRWFEKFN-- 420

Query: 294 GIEPNAITYSTIIAIWGKAGKL---DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             + N+  +S  I  +G+ G +   ++A M   K +     +   +   MI AY  V  +
Sbjct: 421 -YQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKM----LSTCVCNVMIKAYGLVEKL 475

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +   + +    P+ +   + I +++ A   E+A +  R+   A  + D   +  +
Sbjct: 476 DEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVV 535

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F++N     V  +F +M ++G   D+++ ++++++Y ++ + + A+  +  +++ G 
Sbjct: 536 ISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGL 595

Query: 467 VFSDQVHFQMLSLYG-------ARKDFNMLESLFERLDSDSNI 502
             S  ++  ++ LY        A+K + +L+S    L++D+N+
Sbjct: 596 CESATIYNSLIKLYTKVVYLAEAQKMYKLLKS----LNADTNL 634



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 220/453 (48%), Gaps = 11/453 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S++ YN ++    +A Q E     F++M + G++P+  T++T+I  +GK    +   S +
Sbjct: 252 SLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLM 311

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + ME+ +   D   Y+ LI L R+++D   A   F ++K+  ++PD+V+  T++  +   
Sbjct: 312 RTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIK 371

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +  EA+ L++EM E+ +  D  + S +  +YV+     +A   F + N     L+    
Sbjct: 372 GMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWRWFEKFNY---QLNSECF 428

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +  ID +G+      A++ F    K  +  + V  N +++ YG  E   EA  +   M+R
Sbjct: 429 SANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-NVMIKAYGLVEKLDEACEIADGMER 487

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  + +TY+++I +   +   EKA   +++MQ   +  + + YS +I+ + K G L  
Sbjct: 488 YGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM 547

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----IT 373
              LF+++ +SG++ D  +Y  +I AY  VG V  A+     L++       T     I 
Sbjct: 548 VDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIK 607

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           +  +   + EA  +++         ++    CMI+L+S +       E+FE ++  G   
Sbjct: 608 LYTKVVYLAEAQKMYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667

Query: 434 D-SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + SH + + L  Y K+  F+ A  +  EMQ  G
Sbjct: 668 EFSHAMMVCL--YKKIARFDEAHRISKEMQASG 698



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 199/438 (45%), Gaps = 47/438 (10%)

Query: 104 DYSKAISIFS---RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           D+ +A+ IF+   R +   +  +++ YN ++   G+A+ +     L  EM   GV PD  
Sbjct: 120 DWRRAVEIFNWFRRRRRHEV--NVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNS 177

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--W 218
           +Y TL++++ +  +   AL    +M +     D  T +I++ V+ +    + A+  F  W
Sbjct: 178 TYGTLIDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRW 237

Query: 219 SMR---KMGIDP--SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           S+    KM   P  S+ +YNTL+  YG+A    +    F  M R+ +  NVVT+NTMI +
Sbjct: 238 SLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHV 297

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +GK    E+  +LM+ M+     P+  TY+ +I+++ +   +D A   F+K+++  +  D
Sbjct: 298 WGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPD 357

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEA-TW-- 386
            V  +T++  Y   G+V  A+ LL E+ + N +  E   + + R    AG +E+A  W  
Sbjct: 358 VVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWRWFE 417

Query: 387 ---------VFRQAFDA-GEVKDI----SVFGC--------------MIELFSRNKKYAN 418
                     F    DA GE   I      F C              MI+ +   +K   
Sbjct: 418 KFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKMLSTCVCNVMIKAYGLVEKLDE 477

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             E+ + M   G  PD    + +++     +  E A     +MQ    +     +  ++S
Sbjct: 478 ACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVIS 537

Query: 479 LYGARKDFNMLESLFERL 496
            +    + +M++ LF  +
Sbjct: 538 CFAKNGNLHMVDCLFREM 555



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 36/297 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++  +  AK  E A     +M+   +  D   YS +I+CF K G        
Sbjct: 492 PDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCL 551

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    +  D  +YS LI+   ++ D  KA + F  LK +G+      YN++I ++ K
Sbjct: 552 FREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA+ +                          +K +++L         N   +L  
Sbjct: 612 VVYLAEAQKM--------------------------YKLLKSL---------NADTNLYA 636

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MID+Y    M K+A  +F +++  G   +  S+  ++ +Y +   F EA  + + MQ
Sbjct: 637 SNCMIDLYSDHCMVKEAREIFENLKVTG-KANEFSHAMMVCLYKKIARFDEAHRISKEMQ 695

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                   ++YN++I++Y      E A  + Q+M      PN  T+  +  I  K G
Sbjct: 696 ASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752


>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 613

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 209/465 (44%), Gaps = 35/465 (7%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + + +WI  ++ + P V  +N+++    +  Q++ A  L+ ++ +    P   TY+ LI 
Sbjct: 161 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 220

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLV---LYSNLIE-LARKLSDYSKAISIFSRLKSS 118
            +   G+ + A   L +M+   VS   +   +Y+  IE L ++  +  +AI +F R+K  
Sbjct: 221 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 280

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
              P    YN MIN++GKA     +  L  EMR    KP+  +Y+ L+N +       +A
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +F ++ E     D+   N +++ Y +      A  +F  M+ MG +P   SYN ++  
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           YG A L  +A  +F  M+R  I   + ++  ++  Y K+ +  K   +++EM   G+EP+
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
               ++++ ++G+ G+  +   +  ++ +     D   Y  +I  Y + G +   + L  
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           EL++ N  P              +  TW  R                 I  +SR K Y  
Sbjct: 521 ELKEKNFRP--------------DVVTWTSR-----------------IGAYSRKKLYVK 549

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            +EVFE+M  +G  PD     ++L++     + E    +   M +
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+   YN+++    +A +  ++  L+ EMR     P+  TY+ L+  F +EG+ + A
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               +Q+++D +  D+ +Y+ L+E   +      A  IFS ++  G  PD  +YN M++ 
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +G+A L  +A  + EEM+  G+ P   S+  LL+ Y +     +  ++  EM+E     D
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N M+++YG+L      +++   M        + +YN L+ +YG+A        LF 
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            ++ K    +VVT+ + I  Y +   + K   + +EM + G  P+  T   +++      
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 580

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++++   + + +   GV +  ++ + M
Sbjct: 581 QVEQVTSVLRTMH-KGVTVSSLVPKLM 606



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 182/388 (46%), Gaps = 10/388 (2%)

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
           D++ ++ LI+   +   Y +A S++ +L  S  VP    Y  +I  +  A L + A +++
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235

Query: 148 EEMREQGVKPDTVSYSTLLNLYVEN-----HKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
            EM+   V P T+   T+ N Y+E          EA+ VF  M    C     T N+MI+
Sbjct: 236 VEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
           +YG+   +  + +L+  MR     P++ +Y  L+  +    L  +A  +F  +Q   +E 
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +V  YN +++ Y ++     A  +   MQ+ G EP+  +Y+ ++  +G+AG    A  +F
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
           ++++  G+      +  ++ AY +   V   + ++ E+ +    P+T    + + +  R 
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G+  +   +  +  +     DIS +  +I ++ +      + E+F +++   + PD    
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGC 466
              + +Y + + +    +++ EM + GC
Sbjct: 535 TSRIGAYSRKKLYVKCLEVFEEMIDSGC 562



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 195/438 (44%), Gaps = 50/438 (11%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK--EARLLIEE--M 150
           ++   +K +D  K   +   L S+       +++ +INV  + +L K  ++ +L+ E  +
Sbjct: 114 ILSFIQKETDPDKVADVLGALPSTH-----ASWDDLINVSVQLRLNKKWDSIILVCEWIL 168

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           R+   +PD + ++ L++ Y +  ++ EA S++ ++ E        T  ++I  Y    + 
Sbjct: 169 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 228

Query: 211 KDADRLFWSMRKMGIDPSVVS---YNT----LLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           + A+ +   M+   + P  +    YN     L++  G  E   EAI +F+ M+R   +  
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTE---EAIDVFQRMKRDRCKPT 285

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
             TYN MI +YGK+ +   +  L  EM++   +PN  TY+ ++  + + G  ++A  +F+
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 383
           +L+  G+E D  +Y  ++ +Y R G    A  +   ++     P                
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP---------------- 389

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
                          D + +  M++ + R   +++   VFE+M+  G  P      L+L+
Sbjct: 390 ---------------DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           +Y K R+    + +  EM E G      V   ML+LYG    F  +E +   +++     
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494

Query: 504 KKELHHVVAGIYERANRL 521
               ++++  IY +A  L
Sbjct: 495 DISTYNILINIYGKAGFL 512



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 12/344 (3%)

Query: 200 MIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +I+V  QL + K  D +     W +RK    P V+ +N L+  YG+   + EA  L+  +
Sbjct: 144 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 203

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST----IIAIWGK 311
                     TY  +IK Y  +   E+A  ++ EMQN  + P  I  +     I  +  +
Sbjct: 204 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 263

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G  + A  +FQ+++    +     Y  MI  Y +      + +L  E+R    +PN   
Sbjct: 264 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 323

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               +   AR G  E+A  +F Q  + G   D+ V+  ++E +SR        E+F  M+
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PD     +++++YG+      A+ ++ EM+  G   + + H  +LS Y   +D  
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             E++ + +  +       + + +  +Y R  +     +I+  M
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 7/269 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P V+ YN ++ +  RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +  ++M++  ++  +  +  L+    K  D +K  +I   +  +G+ PD    N+M
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++G+   F +   ++ EM       D  +Y+ L+N+Y +         +F E+ E N 
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T    I  Y +  +      +F  M   G  P   +   LL      E   +   
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 587

Query: 251 LFRLMQRKEIEQNVVTYNTMI-KIYGKSL 278
           + R M +       VT ++++ K+  KSL
Sbjct: 588 VLRTMHKG------VTVSSLVPKLMAKSL 610


>gi|115450907|ref|NP_001049054.1| Os03g0162900 [Oryza sativa Japonica Group]
 gi|108706330|gb|ABF94125.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547525|dbj|BAF10968.1| Os03g0162900 [Oryza sativa Japonica Group]
 gi|222624238|gb|EEE58370.1| hypothetical protein OsJ_09514 [Oryza sativa Japonica Group]
          Length = 823

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 253/523 (48%), Gaps = 32/523 (6%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I +W     R+  +V  YNVVL  V RA++W+L   L+ EM   G+APD  TY TL
Sbjct: 123 RAVEIFNWFRRRRRHEVNVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G    A+ WL  M +  +  D +  S ++++ +K  +Y KA   F R      
Sbjct: 183 IDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESD 242

Query: 121 VP-------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           V         L  YNT+I+ +GKA   ++      +M  +GV P+ V+++T+++++ ++ 
Sbjct: 243 VKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHR 302

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y +++    A+  F  M+   + P VVS  
Sbjct: 303 RMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCR 362

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  EA  L + M  + +  +  T + + ++Y  +   E+A    ++    
Sbjct: 363 TLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFN-- 420

Query: 294 GIEPNAITYSTIIAIWGKAGKL---DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             + N+  +S  I  +G+ G +   ++A M   K +     +   +   MI AY  V  +
Sbjct: 421 -YQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKM----LSTCVCNVMIKAYGLVEKL 475

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +   + +    P+ +   + I +++ A   E+A +  R+   A  + D   +  +
Sbjct: 476 DEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVV 535

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F++N     V  +F +M ++G   D+++ ++++++Y ++ + + A+  +  +++ G 
Sbjct: 536 ISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGL 595

Query: 467 VFSDQVHFQMLSLYG-------ARKDFNMLESLFERLDSDSNI 502
             S  ++  ++ LY        A+K + +L+S    L++D+N+
Sbjct: 596 CESATIYNSLIKLYTKVVYLAEAQKTYKLLKS----LNADTNL 634



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 219/453 (48%), Gaps = 11/453 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S++ YN ++    +A Q E     F++M + G++P+  T++T+I  +GK    +   S +
Sbjct: 252 SLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLM 311

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + ME+ +   D   Y+ LI L R+++D   A   F ++K+  ++PD+V+  T++  +   
Sbjct: 312 RTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIK 371

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +  EA+ L++EM E+ +  D  + S +  +YV+     +A   F + N     L+    
Sbjct: 372 GMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNY---QLNSECF 428

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +  ID +G+      A++ F    K  +  + V  N +++ YG  E   EA  +   M+R
Sbjct: 429 SANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-NVMIKAYGLVEKLDEACEIADGMER 487

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  + +TY+++I +   +   EKA   +++MQ   +  + + YS +I+ + K G L  
Sbjct: 488 YGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM 547

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----IT 373
              LF+++ +SG++ D  +Y  +I AY  VG V  A+     L++       T     I 
Sbjct: 548 VDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIK 607

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           +  +   + EA   ++         ++    CMI+L+S +       E+FE ++  G   
Sbjct: 608 LYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667

Query: 434 D-SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + SH + + L  Y K+  F+ A  +  +MQ  G
Sbjct: 668 EFSHAMMVCL--YKKIARFDEAHRISKKMQASG 698



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 193/393 (49%), Gaps = 31/393 (7%)

Query: 104 DYSKAISIFS---RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           D+ +A+ IF+   R +   +  +++ YN ++   G+A+ +     L  EM   GV PD  
Sbjct: 120 DWRRAVEIFNWFRRRRRHEV--NVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNS 177

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--W 218
           +Y TL++++ +  +   AL    +M +     D  T +I++ V+ +    + A+  F  W
Sbjct: 178 TYGTLIDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRW 237

Query: 219 SMR---KMGIDP--SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           S+    KM   P  S+ +YNTL+  YG+A    +    F  M R+ +  NVVT+NTMI +
Sbjct: 238 SLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHV 297

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +GK    E+  +LM+ M+     P+  TY+ +I+++ +   +D A   F+K+++  +  D
Sbjct: 298 WGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPD 357

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFR 389
            V  +T++  Y   G+V  A+ LL E+ + N +  E   + + R    AG +E+A W + 
Sbjct: 358 VVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQA-WCWF 416

Query: 390 QAFD---AGEV--KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           + F+     E    +I  FG    +    K +   I+   KM S      + +  +++ +
Sbjct: 417 EKFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIK--RKMLS------TCVCNVMIKA 468

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           YG + + + A ++   M+  G +  D + +  L
Sbjct: 469 YGLVEKLDEACEIADGMERYG-ILPDYLTYSSL 500



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 36/297 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++  +  AK  E A     +M+   +  D   YS +I+CF K G        
Sbjct: 492 PDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCL 551

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    +  D  +YS LI+   ++ D  KA + F  LK +G+      YN++I ++ K
Sbjct: 552 FREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA+                          + +K +++L         N   +L  
Sbjct: 612 VVYLAEAQ--------------------------KTYKLLKSL---------NADTNLYA 636

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MID+Y    M K+A  +F +++  G   +  S+  ++ +Y +   F EA  + + MQ
Sbjct: 637 SNCMIDLYSDHCMVKEAREIFENLKVTG-KANEFSHAMMVCLYKKIARFDEAHRISKKMQ 695

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                   ++YN++I++Y      E A  + Q+M      PN  T+  +  I  K G
Sbjct: 696 ASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 212/453 (46%), Gaps = 4/453 (0%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y+P V +Y+ V+    R  + +    L ++M+Q+G+ P+ YTY ++I    +      A 
Sbjct: 700  YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAE 759

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                +M    +  D ++Y+ L++   K  D   A   F  + S  I PD++ Y  +I+ F
Sbjct: 760  EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +     EA  L  EM  +G++PD ++++ L+N Y +     +A  V   M +  C  ++
Sbjct: 820  CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T   +ID   +      A+ L   M K+G+ P++ +YN+++    ++    EA+ L   
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
             +   +  + VTY T++  Y KS E +KA  ++ EM  +G++P  +T++ ++  +   G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE-RVGLVAHA---KRLLHELRQPNTIPRET 370
            L+    L   + + G+  +   +  ++  Y  R  L A     K +     +P+    E 
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 371  AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             +     A  ++EA ++F++    G    +S +  +I+ F + KK+    E+F++MR  G
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
               D  I     ++  K +  +T  D   E+ E
Sbjct: 1120 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 219/452 (48%), Gaps = 4/452 (0%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            +V +YN+V+  V +  +   AH L   M  +G  PD  +YST+I  + + G  D     +
Sbjct: 668  NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727

Query: 78   QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            ++M+Q  +  +   Y ++I L  ++   ++A   FS +   GI+PD + Y T+++ F K 
Sbjct: 728  EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787

Query: 138  KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               + A     EM  + + PD ++Y+ +++ + +    VEA  +F EM       D+ T 
Sbjct: 788  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847

Query: 198  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              +++ Y +    KDA R+   M + G  P+VV+Y TL+    +      A  L   M +
Sbjct: 848  TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907

Query: 258  KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              ++ N+ TYN+++    KS   E+A  L+ E +  G+  + +TY+T++  + K+G++D+
Sbjct: 908  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967

Query: 318  AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            A  +  ++   G++   V +  ++  +   G++   ++LL+ +      P  T    L +
Sbjct: 968  AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027

Query: 378  A----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                   ++ AT +++     G   D   +  +++     +       +F++M+  G+  
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087

Query: 434  DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                 ++++  + K ++F  A +++ +M+ +G
Sbjct: 1088 SVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 213/471 (45%), Gaps = 4/471 (0%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +F E  + G+  +  +Y+ +I    + G  + A   L  ME    + D++ YS +I    
Sbjct: 656  VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            +  +  K   +  ++K  G+ P+   Y ++I +  +     EA     EM  QG+ PDT+
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             Y+TL++ + +      A   F EM+  +   D+ T   +I  + Q+    +A +LF  M
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               G++P ++++  L+  Y +A    +A  +   M +     NVVTY T+I    K  + 
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            + A  L+ EM   G++PN  TY++I+    K+G ++ A  L  +  ++G+  D V Y T+
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 341  IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
            + AY + G +  A+ +L E+     QP  +     +      G +E+   +       G 
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              + + F C+++ +           +++ M S G  PD      ++  +   R  + A  
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 457  LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
            L+ EM+ +G   S   +  ++  +  RK F     +F+++  D     KE+
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 181/408 (44%), Gaps = 4/408 (0%)

Query: 95   LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
            L  L++  +  + AI +F      G+  ++ +YN +I+   +     EA  L+  M  +G
Sbjct: 640  LARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKG 699

Query: 155  VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              PD +SYST++N Y    +  +   +  +M +     +  T   +I +  ++    +A+
Sbjct: 700  YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAE 759

Query: 215  RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
              F  M   GI P  + Y TL+  + +      A   F  M  ++I  +V+TY  +I  +
Sbjct: 760  EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819

Query: 275  GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             +  +  +A  L  EM  RG+EP+ IT++ ++  + KAG +  A  +   +  +G   + 
Sbjct: 820  CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879

Query: 335  VLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQ 390
            V Y T+I    + G +  A  LLHE+     QPN     + +  L ++G IEEA  +  +
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 391  AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               AG   D   +  +++ + ++ +     E+  +M   G  P      +++N +     
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 451  FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             E  + L + M  +G   +      ++  Y  R +     ++++ + S
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 120/246 (48%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A  SP+V  Y  ++  + +    + A+ L  EM + G+ P+ +TY++++    K G  +
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A+  + + E   ++ D V Y+ L++   K  +  KA  I + +   G+ P +V +N ++
Sbjct: 932  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            N F    + ++   L+  M  +G+ P+  +++ L+  Y   +    A +++ +M      
Sbjct: 992  NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             D  T   ++  +      K+A  LF  M+  G   SV +Y+ L++ + + + F EA  +
Sbjct: 1052 PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREI 1111

Query: 252  FRLMQR 257
            F  M+R
Sbjct: 1112 FDQMRR 1117



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 80/175 (45%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A  +     Y  ++    ++ + + A  +  EM  +G+ P   T++ L+  F   GM 
Sbjct: 941  EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +     L  M    ++ +   ++ L++     ++   A +I+  + S G+ PD   Y  +
Sbjct: 1001 EDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENL 1060

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +     A+  KEA  L +EM+ +G      +YS L+  + +  KFVEA  +F +M
Sbjct: 1061 VKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 222/484 (45%), Gaps = 51/484 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN V+R     K+ E A  L +EM+  G +    T+  LI  F K G  D A+  
Sbjct: 175 PDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL 234

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M+   +  DL++Y++LI       +  +  ++F  +   G  P  + YNT+I  F K
Sbjct: 235 LKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  + E M E+GV+P+  +Y+ L++      K  EAL +   M + +   ++ T
Sbjct: 295 LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVT 354

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRK-------------MG------------------- 224
            NI+I+   +  +  DA  +   M+K             +G                   
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414

Query: 225 -----IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
                 DP V+S+N L+    +     +A+ ++ L+  K    ++VT N ++    KS +
Sbjct: 415 KDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGD 474

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL--Y 337
             KA  L +++ N  I PN+ TY+T+I  + K G L+ A  L  K+R S  E+ P +  Y
Sbjct: 475 VNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS--ELPPSVFDY 532

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFD 393
             ++ +  + G +  A RL  E+++ ++ P   +  I+     +AG I+ A  +      
Sbjct: 533 NCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSH 592

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN---SYG---K 447
           AG   D+  +  +I  F +       I  F+KM  +G+ PD+HI   VL    S G   K
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDK 652

Query: 448 LREF 451
           L EF
Sbjct: 653 LTEF 656



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 219/459 (47%), Gaps = 7/459 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L   ++ ++   AHG+   M +RG A + Y Y+ L+    +   F  A+S L++M Q+ 
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  D+V Y+ +I    +  +  KA+ + + ++ SG    LV +  +I+ F KA    EA 
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            L++EM+ +G++ D + Y++L+  + +  +     ++F E+ E        T N +I  +
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +L   K+A  +F  M + G+ P+V +Y  L+          EA+ L  LM +K+ E NV
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA-MLFQ 323
           VTYN +I    K      A  +++ M+ R   P+ ITY++++      G LD A+ +L+ 
Sbjct: 353 VTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYL 412

Query: 324 KLR-SSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
            L+ SS  + D + +  +I    +   +  A      L+ +L   + +     +    ++
Sbjct: 413 MLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKS 472

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G + +A  +++Q  ++  V +   +  MI+ F +         +  KMR +   P     
Sbjct: 473 GDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDY 532

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +L+S  K    + A  L+ EMQ +   F D + F ++
Sbjct: 533 NCLLSSLCKKGTLDQAWRLFEEMQRDD-SFPDVISFNIM 570



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 228/502 (45%), Gaps = 47/502 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDS 72
           ++ +V+ YN++L+ + R  ++  A  L  EMRQ  + PD  +Y+T+I   C GKE   + 
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE--LEK 195

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+    +M+    S  LV +  LI+   K     +A+ +   +K  G+  DL+ Y ++I 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F         + L +E+ E+G  P  ++Y+TL+  + +  +  EA  +F  M E     
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   +ID    +   K+A +L   M +   +P+VV+YN ++    +  L  +A+ + 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM--QNRGIEPNAITYSTII---- 306
            LM+++    + +TYN+++       + ++A+ L+  M   +   +P+ I+++ +I    
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLC 435

Query: 307 ---------AIWG----------------------KAGKLDRAAMLFQKLRSSGVEIDPV 335
                     I+                       K+G +++A  L++++ +S +  +  
Sbjct: 436 KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSD 495

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y TMI  + + G++  AK LL ++R     P+       ++ L + G +++A  +F + 
Sbjct: 496 TYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
                  D+  F  MI+   +     +   +   M  AG  PD    + ++N + KL   
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615

Query: 452 ETADDLYSEMQEEGCVFSDQVH 473
           + A   + +M + G  F    H
Sbjct: 616 DEAISFFDKMIDSG--FEPDAH 635



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 43/438 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R  A+ D + E    SP    YN ++R   +  + + A  +F+ M +RG+ P+ YTY+ L
Sbjct: 265 RGKALFDEVLERGD-SPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGL 323

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A+  L  M Q     ++V Y+ +I    K S  + A+ I   +K    
Sbjct: 324 IDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRT 383

Query: 121 VPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEA 178
            PD + YN+++  +  K  L + ++LL   +++     PD +S++ L++   + ++  +A
Sbjct: 384 RPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQA 443

Query: 179 LSVFAEMNEVNCPLDLTTCNI-----------------------------------MIDV 203
           L ++  + E     D+ T NI                                   MID 
Sbjct: 444 LDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDG 503

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           + +  M   A  L   MR   + PSV  YN LL    +     +A  LF  MQR +   +
Sbjct: 504 FCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPD 563

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           V+++N MI    K+ + + A +L+  M + G+ P+  TYS +I  + K G LD A   F 
Sbjct: 564 VISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI-PRETAITIL----ARA 378
           K+  SG E D  +  +++      G        + +L   + +  +E   T++    + +
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSS 683

Query: 379 GRIEEATWVFRQAFDAGE 396
           G ++ A  + R A D  E
Sbjct: 684 GNMDIAKRLLRVADDKEE 701



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/430 (21%), Positives = 185/430 (43%), Gaps = 6/430 (1%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S+ ++M +     + V  S L+E   ++     A  + + +   G   ++  YN ++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +   F +A  L+ EMR+  + PD VSY+T++  + E  +  +AL +  EM    C  
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L T  I+ID + +     +A  L   M+  G++  ++ Y +L+R + +         LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             +  +      +TYNT+I+ + K    ++A+ + + M  RG+ PN  TY+ +I      
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           GK   A  L   +     E + V Y  +I    +  LVA A  ++  +++    P+ I  
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITY 390

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKM 426
            + +  L   G ++EA+ +           D  V  F  +I    +  +    +++++ +
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
                  D     ++LNS  K  +   A +L+ ++     V +   +  M+  +      
Sbjct: 451 VEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGML 510

Query: 487 NMLESLFERL 496
           N+ + L  ++
Sbjct: 511 NVAKGLLCKM 520



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 167/362 (46%), Gaps = 8/362 (2%)

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           NH+   A S + +M E +  ++  + + +++ + Q+     A  +   M K G   +V +
Sbjct: 87  NHEV--AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYN 144

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN LL+       FG+A+ L R M++  +  +VV+YNT+I+ + +  E EKA  L  EMQ
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             G   + +T+  +I  + KAGK+D A  L ++++  G+E D ++Y ++I  +   G + 
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
             K L  E+ +    P  I   T I    + GR++EA+ +F    + G   ++  +  +I
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +      K    +++   M      P+     +++N   K      A ++   M++    
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE--RANRLNDAS 525
             +  +  +L    A+ D +    L   +  DS+    ++    A I+   + NRL+ A 
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444

Query: 526 RI 527
            I
Sbjct: 445 DI 446


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 210/463 (45%), Gaps = 36/463 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F +  +L ++++   +  A  L  +M  +GIA +  T + LI CF + G    + S
Sbjct: 57  TPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFS 116

Query: 76  WLQQMEQDRVSGDLVL-------------YSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
               + +     +++              Y  LI    K+     A+ +  R+    + P
Sbjct: 117 VFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           ++V YNT+I+   K KL  EA  L  EM  +G+ PD V+YS L++ +    K  +A+ +F
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            +M   N   D+ T NI++D + +    K+   +F  M K GI P+VV+Y +L+  Y   
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +   +A  +F  M +  +  +  +YN MI  + K  + ++A NL ++M  + I PN +TY
Sbjct: 297 KQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTY 356

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           +++I    K+GK+  A  L  ++   GV  D + Y +++ A  +   V  A  LL +L+ 
Sbjct: 357 TSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 416

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
                                   VF   F  G   D+  +  MI+ F     +   + +
Sbjct: 417 -----------------------QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             KM   G  PD+    +++ S  K  E + A+ L  EM   G
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 204/465 (43%), Gaps = 36/465 (7%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           + Q+   P  + +  ++    K   + +AIS  +QME   ++ +LV  + LI    +L  
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              + S+F+ +   G  P+++   T+I    K    K                  VSY T
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLI----KGLCLK------------------VSYGT 148

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+N   +  +   AL +   ++      ++   N +ID   ++ +  +A  L+  M   G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P VV+Y+ L+  +       +AI LF  M  + I+ +V T+N ++  + K  + ++  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            +   M  +GI+PN +TY +++  +    ++++A  +F  +   GV  D   Y  MI  +
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 345 ERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            ++  V  A  L  ++   N IP      + I  L ++G+I  A  +  +  D G   DI
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388

Query: 401 SVFGCMIELFSRNKKYANVI--------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             +  +++   +N +    I        +VFE +   GY  D +   +++  +     F 
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN-MLESLFERL 496
            A  L S+M++ G +  D   ++++ L   +KD N M E L   +
Sbjct: 449 EALALLSKMEDNGRI-PDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 156/322 (48%), Gaps = 8/322 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++ ++ + K    A  L+ EM   GI+PD  TYS LI+ F   G    AI  
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M  + +  D+  ++ L++   K     +  ++F+ +   GI P++V Y ++++ +  
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   +A  +   M + GV PDT SY+ ++N + +  K  EA+++F +M+  N   ++ T
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +      A +L   M   G+ P +++Y+++L    +     +AI L   ++
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415

Query: 257 RKEIEQ--------NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +  E         +V  Y  MI+ +       +A  L+ +M++ G  P+A TY  II  
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475

Query: 309 WGKAGKLDRAAMLFQKLRSSGV 330
             K  + D A  L +++ + G+
Sbjct: 476 LFKKDENDMAEKLLREMIARGL 497



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 8/288 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y+ ++       + + A  LF++M    I PD YT++ L+  F K+G      +
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 269

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  +  ++V Y +L++    +   +KA SIF+ +   G+ PD  +YN MIN F 
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 329

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K   EA  L ++M  + + P+ V+Y++L++   ++ K   AL +  EM++   P D+ 
Sbjct: 330 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDII 389

Query: 196 TCNIMIDVYG---QLDMA-----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           T + ++D      Q+D A     K  D++F  +   G +  V +Y  +++ +    LF E
Sbjct: 390 TYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNE 449

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           A+ L   M+      +  TY  +I    K  E++ A  L++EM  RG+
Sbjct: 450 ALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/313 (19%), Positives = 132/313 (42%), Gaps = 26/313 (8%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P +  +  +L    +   +  AI L R M+ K I  N+VT N +I  + +  ++  + ++
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              +  +G +PN IT +T+I   G   K                    V Y T+I    +
Sbjct: 118 FANILKKGYDPNVITLTTLIK--GLCLK--------------------VSYGTLINGLCK 155

Query: 347 VGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           VG    A +LL     +L QPN +   T I  + +   + EA  ++ +    G   D+  
Sbjct: 156 VGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVT 215

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I  F    K  + I++F KM      PD +   ++++ + K  + +    +++ M 
Sbjct: 216 YSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 275

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
           ++G   +   +  ++  Y   K  N   S+F  +         + ++++   + +  +++
Sbjct: 276 KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335

Query: 523 DASRIMNRMNKRR 535
           +A  +  +M+ + 
Sbjct: 336 EAMNLFKKMHCKN 348


>gi|22773251|gb|AAN06857.1| Hypothetical protein [Oryza sativa Japonica Group]
          Length = 769

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/580 (23%), Positives = 267/580 (46%), Gaps = 57/580 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I +W     R+  +V  YNVVL  V RA++W+L   L+ EM   G+APD  TY TL
Sbjct: 123 RAVEIFNWFRRRRRHEVNVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G    A+ WL  M +  +  D +  S ++++ +K  +Y KA   F R      
Sbjct: 183 IDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESD 242

Query: 121 VP-------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           V         L  YNT+I+ +GKA   ++      +M  +GV P+ V+++T+++++ ++ 
Sbjct: 243 VKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHR 302

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y +++    A+  F  M+   + P VVS  
Sbjct: 303 RMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCR 362

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  EA  L + M  + +  +  T + + ++Y  +   E+A    ++    
Sbjct: 363 TLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFN-- 420

Query: 294 GIEPNAITYSTIIAIWGKAGKL---DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             + N+  +S  I  +G+ G +   ++A M   K +     +   +   MI AY  V  +
Sbjct: 421 -YQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKM----LSTCVCNVMIKAYGLVEKL 475

Query: 351 AHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  +   + +    P+ +   + I +++ A   E+A +  R+   A  + D   +  +
Sbjct: 476 DEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVV 535

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I  F++N     V  +F +M ++G   D+++ ++++++Y ++ + + A+  +  +++ G 
Sbjct: 536 ISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGL 595

Query: 467 VFSDQVHFQMLSLYG-------ARKDFNMLESL--------------------------- 492
             S  ++  ++ LY        A+K + +L+SL                           
Sbjct: 596 CESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDLYSDHCMVKEARE 655

Query: 493 -FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            FE L      N+   H ++  +Y++  R ++A RI  +M
Sbjct: 656 IFENLKVTGKANEFS-HAMMVCLYKKIARFDEAHRISKKM 694



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 219/453 (48%), Gaps = 11/453 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S++ YN ++    +A Q E     F++M + G++P+  T++T+I  +GK    +   S +
Sbjct: 252 SLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLM 311

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + ME+ +   D   Y+ LI L R+++D   A   F ++K+  ++PD+V+  T++  +   
Sbjct: 312 RTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYGYSIK 371

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            +  EA+ L++EM E+ +  D  + S +  +YV+     +A   F + N     L+    
Sbjct: 372 GMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNY---QLNSECF 428

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +  ID +G+      A++ F    K  +  + V  N +++ YG  E   EA  +   M+R
Sbjct: 429 SANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-NVMIKAYGLVEKLDEACEIADGMER 487

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I  + +TY+++I +   +   EKA   +++MQ   +  + + YS +I+ + K G L  
Sbjct: 488 YGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM 547

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----IT 373
              LF+++ +SG++ D  +Y  +I AY  VG V  A+     L++       T     I 
Sbjct: 548 VDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIK 607

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
           +  +   + EA   ++         ++    CMI+L+S +       E+FE ++  G   
Sbjct: 608 LYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVTGKAN 667

Query: 434 D-SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + SH + + L  Y K+  F+ A  +  +MQ  G
Sbjct: 668 EFSHAMMVCL--YKKIARFDEAHRISKKMQASG 698



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 193/393 (49%), Gaps = 31/393 (7%)

Query: 104 DYSKAISIFS---RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           D+ +A+ IF+   R +   +  +++ YN ++   G+A+ +     L  EM   GV PD  
Sbjct: 120 DWRRAVEIFNWFRRRRRHEV--NVIHYNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNS 177

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF--W 218
           +Y TL++++ +  +   AL    +M +     D  T +I++ V+ +    + A+  F  W
Sbjct: 178 TYGTLIDVHCKGGRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRW 237

Query: 219 SMR---KMGIDP--SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           S+    KM   P  S+ +YNTL+  YG+A    +    F  M R+ +  NVVT+NTMI +
Sbjct: 238 SLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHV 297

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +GK    E+  +LM+ M+     P+  TY+ +I+++ +   +D A   F+K+++  +  D
Sbjct: 298 WGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPD 357

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFR 389
            V  +T++  Y   G+V  A+ LL E+ + N +  E   + + R    AG +E+A W + 
Sbjct: 358 VVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTRMYVDAGMLEQA-WCWF 416

Query: 390 QAFD---AGEV--KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           + F+     E    +I  FG    +    K +   I+   KM S      + +  +++ +
Sbjct: 417 EKFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIK--RKMLS------TCVCNVMIKA 468

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           YG + + + A ++   M+  G +  D + +  L
Sbjct: 469 YGLVEKLDEACEIADGMERYG-ILPDYLTYSSL 500



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 36/297 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ ++  +  AK  E A     +M+   +  D   YS +I+CF K G        
Sbjct: 492 PDYLTYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCL 551

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    +  D  +YS LI+   ++ D  KA + F  LK +G+      YN++I ++ K
Sbjct: 552 FREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA+                          + +K +++L         N   +L  
Sbjct: 612 VVYLAEAQ--------------------------KTYKLLKSL---------NADTNLYA 636

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N MID+Y    M K+A  +F +++  G   +  S+  ++ +Y +   F EA  + + MQ
Sbjct: 637 SNCMIDLYSDHCMVKEAREIFENLKVTG-KANEFSHAMMVCLYKKIARFDEAHRISKKMQ 695

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                   ++YN++I++Y      E A  + Q+M      PN  T+  +  I  K G
Sbjct: 696 ASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALKIILVKRG 752


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 214/455 (47%), Gaps = 10/455 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  +  ++    +  + + A  LF  M QRGI PD   YSTLI  + K GM      
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              Q     V  D+V++S+ I++  K  D + A  ++ R+   GI P++V Y  +I    
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     EA  +  ++ ++G++P  V+YS+L++ + +        +++ +M ++  P D+ 
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              +++D   +  +   A R    M    I  +VV +N+L+  +     F EA+ +FRLM
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 256 QRKEIEQNVVTYNTMIKI------YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
               I+ +V T+ T++++      + K ++      L   MQ   I  +    + +I + 
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
            K  +++ A+  F  L    +E D V Y TMI  Y  +  +  A+R+   L+     PNT
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I +L +   ++ A  +F    + G   +   +GC+++ FS++       ++FE+
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           M+  G  P     +++++   K    + A +++ +
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 195/425 (45%), Gaps = 37/425 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  Y ++++ + +  +   A G++ ++ +RG+ P   TYS+LI  F K G   S  +
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M +     D+V+Y  L++   K      A+    ++    I  ++V +N++I+ + 
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE------ALSVFAEMNEVN 189
           +   F EA  +   M   G+KPD  +++T++ + +    F +       L +F  M    
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+  CN++I +  +    +DA + F ++ +  ++P +V+YNT++  Y       EA 
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F L++      N VT   +I +  K+ + + A  +   M  +G +PNA+TY  ++  +
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K+  ++ +  LF++++  G+                                P+ +   
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGI-------------------------------SPSIVSYS 716

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I  L + GR++EAT +F QA DA  + D+  +  +I  + +  +      ++E M   
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776

Query: 430 GYFPD 434
           G  PD
Sbjct: 777 GVKPD 781



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/531 (21%), Positives = 229/531 (43%), Gaps = 50/531 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +   + + N VL+  L   Q E+A  L   +   G AP+  T+ TLI  F K G   
Sbjct: 245 ERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG--- 300

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                    E DR                       A  +F  ++  GI PDL+AY+T+I
Sbjct: 301 ---------EMDR-----------------------AFDLFKVMEQRGIEPDLIAYSTLI 328

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + KA +      L  +   +GVK D V +S+ +++YV++     A  V+  M      
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T  I+I    Q     +A  ++  + K G++PS+V+Y++L+  + +         L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           +  M +     +VV Y  ++    K      A     +M  + I  N + ++++I  W +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMI-VAYERVGLVAHAKRL----LHELRQPNTI 366
             + D A  +F+ +   G++ D   + T++ V+        H K      L +L Q N I
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568

Query: 367 PRETAIT-----ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             + A+      +L +  RIE+A+  F    +     DI  +  MI  +   ++      
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +FE ++   + P++  + ++++   K  + + A  ++S M E+G   +   +  ++  + 
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHH--VVAGIYERANRLNDASRIMNR 530
              D      LFE +  +  I+   + +  ++ G+ +R  R+++A+ I ++
Sbjct: 689 KSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRG-RVDEATNIFHQ 737



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 163/365 (44%), Gaps = 41/365 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  Y+ ++    +         L+++M + G  PD   Y  L+    K+G+   A+ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY--------- 127
             +M    +  ++V++++LI+   +L+ + +A+ +F  +   GI PD+  +         
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 128 --------------------------------NTMINVFGKAKLFKEARLLIEEMREQGV 155
                                           N +I++  K    ++A      + E  +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           +PD V+Y+T++  Y    +  EA  +F  +       +  T  I+I V  + +    A R
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           +F  M + G  P+ V+Y  L+  + ++     +  LF  MQ K I  ++V+Y+ +I    
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K    ++ATN+  +  +  + P+ + Y+ +I  + K G+L  AA+L++ +  +GV+ D +
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783

Query: 336 LYQTM 340
           L + +
Sbjct: 784 LQRAL 788



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 102/214 (47%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + S  +   NVV+  + +  + E A   F+ + +  + PD  TY+T+I  +      D A
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               + ++      + V  + LI +  K +D   AI +FS +   G  P+ V Y  +++ 
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K+   + +  L EEM+E+G+ P  VSYS +++   +  +  EA ++F +  +     D
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           +    I+I  Y ++    +A  L+  M + G+ P
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E +  P +  YN ++      ++ + A  +F+ ++     P+  T + LI    K    D
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI     M +     + V Y  L++   K  D   +  +F  ++  GI P +V+Y+ +I
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +   K     EA  +  +  +  + PD V+Y+ L+  Y +  + VEA  ++  M
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 55/115 (47%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I  E    P+   Y  ++    ++   E +  LF+EM+++GI+P   +YS +I    K G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             D A +   Q    ++  D+V Y+ LI    K+    +A  ++  +  +G+ PD
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 211/465 (45%), Gaps = 13/465 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P VF YN+++  + +A + + A  +  EM  RG+ PD  T+++++    K G F+
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S L  M +         Y+ LI    K  +  +A ++     SSG VPD+V Y+ + 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K     EA  L++EM   G  P+ V+Y+TL++   +  K  +A  +   +      
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 192 LDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            D+ T  I++D     G+LD A    ++   M K G  PSV++Y  L+          EA
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKAL---KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            H+F+ M  K+   + + Y +++  Y KS   ++A  ++  +  RG  P    Y+ ++  
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDG 296

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
           + K G+LD    +F+ +   G   +   Y  ++    + G V  A   L  +     +P 
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 369 ETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
             +  I    L +A + +EA  V  Q   AG   D   +  ++  F + +++ + + + +
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            M  AG  PD+     +++   +      A +L  EM   GCV S
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 461



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 16/459 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P++  YN ++  + +A + E A+ L + +   G  PD  TY+ ++    KEG  D A+ 
Sbjct: 147 TPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 206

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            ++ M +   +  ++ Y+ L+E   +     +A  IF  + S     D +AY +++N + 
Sbjct: 207 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 266

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K+   KEA+ +++ +R     P    Y+ L++ Y +  +  E  +VF +M    C  ++ 
Sbjct: 267 KSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 323

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI++D   +     +A     SM   G  P VVSYN ++    +A    EA  +   M
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM 383

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  I  + VTYNT++  + K    + A  +++ M   G++P+ +TY+T+I+   +  +L
Sbjct: 384 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 443

Query: 316 -DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
            D   ++ + LR+  V      Y T+I    + G +  A  L+  +     + NT+    
Sbjct: 444 GDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI 503

Query: 371 AITILARAGRIEEATWVFRQA---FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            I  L + GR++EA+ +  +     D      + +  C  E   R  K A      E + 
Sbjct: 504 FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAR-----EMVA 558

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G    SH   L+++++ K +  + A  L   M + GC
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGC 597



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 3/345 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN+++  + +A + + A  + D+M Q GI PD  TY+TL+  F KE  FD A+  
Sbjct: 355 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 414

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR-LKSSGIVPDLVAYNTMINVFG 135
           L+ M +  V  D V Y+ LI    + +    A  +    L++  +V     YNT+I+   
Sbjct: 415 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 474

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    K+A LL++ M   GV+ +TV+Y+  ++   +  +  EA S+ +EM+ +   +  T
Sbjct: 475 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYT 534

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I +    QLD A    R   +++ + I     ++N L+  + + +   EA+ L  LM
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSH--TFNLLIDAFTKTKRLDEALTLLELM 592

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++    +V+TYN +I    K  + +KA  L  EM  RGI  ++++Y+ +I      G+ 
Sbjct: 593 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 652

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             A  + +++ SS  EID +  + + +A    G    A  LL  +
Sbjct: 653 KEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 211/493 (42%), Gaps = 46/493 (9%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M +R +APD +TY+ LI    K    D A   L +M    V+ D V ++++++   K   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + +A S+ + +      P    YNT+I+   K +    A+ L++E    G  PD V+YS 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L +   +  +  EA  +  EM+   C                                  
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCT--------------------------------- 147

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P++V+YNTL+    +A    +A  L   +       +VVTY  ++    K    +KA 
Sbjct: 148 --PNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 205

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            +++ M  RG  P+ ITY+ ++    + G++D A  +F+++ S     D + Y +++  Y
Sbjct: 206 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 265

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITI-LARAGRIEEATWVFRQAFDAGEVKDISVF 403
            +      A++++  +R    I    A+     + GR++E   VF      G V +I  +
Sbjct: 266 CKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 325

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++   ++ K        E M SAG  PD     ++++   K  + + A  +  +M +
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 385

Query: 464 EGCVFSDQVHFQMLSLYGARKD-----FNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
            G +  D V +  L     +++       +L+++ +      N+    L   ++G+  + 
Sbjct: 386 AG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL---ISGL-SQT 440

Query: 519 NRLNDASRIMNRM 531
           NRL DA  +M+ M
Sbjct: 441 NRLGDAYELMHEM 453



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 40/416 (9%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P +  YN ++    +  + +    +F++M  RG  P+  TY+ ++    K G  D A
Sbjct: 282 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             +L+ M       D+V Y+ +I+   K S   +A  +  ++  +GI PD V YNT++  
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K + F +A  +++ M + GV PD V+Y+TL++   + ++  +A  +  EM    C + 
Sbjct: 402 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 461

Query: 194 -LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHL 251
             TT N +ID   +    K A  L   M   G++ + V+YN  + R+  E  L  EA  L
Sbjct: 462 ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL-DEASSL 520

Query: 252 FRLMQ--RKEIEQNVV-------------------------------TYNTMIKIYGKSL 278
              M   R E+    V                               T+N +I  + K+ 
Sbjct: 521 LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 580

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A  L++ M  RG  P+ ITY+ +I    K  K+D+A  LF ++   G+    V Y 
Sbjct: 581 RLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 640

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQ 390
            +I      G    A ++L E+   +    +     L  A    GR EEA  + R+
Sbjct: 641 VLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRR 696


>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
 gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
          Length = 571

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 179/369 (48%), Gaps = 3/369 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYST 59
           +++AI   I    +  P+  AYN ++  ++   Q+E  H L++EM   G   PD  TYS 
Sbjct: 177 KAIAIFYQIKTR-KCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSA 235

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI+ F K G  DSAI  L +M+ + +     +Y+ L+ L  KL+D   A+S+F  ++   
Sbjct: 236 LISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQY 295

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PD+  Y  +I   GKA    EA     EM+ +G +PDT+  + ++N   +  +  +A+
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAM 355

Query: 180 SVFAEMNEVNCPLDLTTCNIMID-VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            +F EM  + C   + T N +I  ++     A +    F  M++ GI PS  +Y+ L+  
Sbjct: 356 KLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDG 415

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +     +A+ L   M  K        Y ++I   GK+  ++ A  L QE++      +
Sbjct: 416 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           +  Y+ +I   GKAG+LD A  +F ++   G   D   Y  ++    R G++  A   + 
Sbjct: 476 SRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 535

Query: 359 ELRQPNTIP 367
            +++   IP
Sbjct: 536 RMQEHGCIP 544



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 181/425 (42%), Gaps = 33/425 (7%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD- 83
           V+R +  AK    A  +F +++ R   P    Y+++I     EG ++       +M  + 
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEG 224

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
               D + YS LI    KL     AI + + +K +G+ P    Y  ++ +F K      A
Sbjct: 225 HCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGA 284

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
             L EEMR Q  +PD  +Y+ L+    +  +  EA   F EM    C  D    N MI+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE-LFGEAIHLFRLMQRKEIEQ 262
            G+     DA +LF  M  +   PSVV+YNT+++   E++    E    F  M+   I  
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +  TY+ +I  + K+   EKA  L++EM  +G  P    Y ++I   GKA + D A  LF
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
           Q+L+ +       +Y  MI          H                      L +AGR++
Sbjct: 465 QELKENCGSSSSRVYAVMI---------KH----------------------LGKAGRLD 493

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  +F +    G   D+  +  ++   +R       +    +M+  G  PD +   ++L
Sbjct: 494 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 553

Query: 443 NSYGK 447
           N   K
Sbjct: 554 NGLQK 558



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 194/431 (45%), Gaps = 11/431 (2%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD- 104
           ++R    D  TY  LI C      +      +Q+M ++ +   +V  + L E+ R L + 
Sbjct: 115 KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSEVVRMLGNA 172

Query: 105 --YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVS 161
              SKAI+IF ++K+    P   AYN+MI +      +++   L  EM  +G   PDT++
Sbjct: 173 KMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMT 232

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS L++ + +  +   A+ +  EM +           +++ ++ +L+    A  LF  MR
Sbjct: 233 YSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMR 292

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                P V +Y  L+R  G+A    EA H F  MQR+    + +  N MI   GK+   +
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352

Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            A  L QEM      P+ +TY+TII A++    +       F++++ SG+      Y  +
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I  + +   +  A  LL E+ +    P   A    I  L +A R + A  +F++  +   
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                V+  MI+   +  +  + I +F++M   G  PD +    +++   +    + A  
Sbjct: 473 SSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 532

Query: 457 LYSEMQEEGCV 467
               MQE GC+
Sbjct: 533 TMRRMQEHGCI 543



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 6/266 (2%)

Query: 11  EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           EE R+    P VF Y  ++R + +A + + A+  F EM++ G  PD    + +I   GK 
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G  D A+   Q+M   R    +V Y+ +I+ L    S  S+  S F R+K SGI P    
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ +I+ F K    ++A +L+EEM E+G  P   +Y +L++   +  ++  A  +F E+ 
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 187 EVNCPLDLTTC-NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
           E NC    +    +MI   G+     DA  +F  M K+G  P V +YN L+       + 
Sbjct: 469 E-NCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 527

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMI 271
            EA+   R MQ      ++ +YN ++
Sbjct: 528 DEALSTMRRMQEHGCIPDINSYNIIL 553



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 175/414 (42%), Gaps = 34/414 (8%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV-EALSV 181
           D   Y  +I+     + + E   +I+EM    +   T +  + +   + N K V +A+++
Sbjct: 122 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYG 240
           F ++    C       N MI +       +    L+  M   G   P  ++Y+ L+  + 
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFC 241

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +      AI L   M+   ++     Y  ++ ++ K  +   A +L +EM+++   P+  
Sbjct: 242 KLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVF 301

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ +I   GKAG++D A   F +++  G   D ++   M                    
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNM-------------------- 341

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANV 419
                      I  L +AGR+++A  +F++      +  +  +  +I+ LF    + + V
Sbjct: 342 -----------INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEV 390

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
              FE+M+ +G  P S   +++++ + K    E A  L  EM E+G       +  ++  
Sbjct: 391 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            G  K +++   LF+ L  +   +   ++ V+     +A RL+DA  + + MNK
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNK 504



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 1/190 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           R  PSV  YN +++ +  +K +       F+ M++ GI+P  +TYS LI  F K    + 
Sbjct: 365 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 424

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L++M++         Y +LI+   K   Y  A  +F  LK +        Y  MI 
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIK 484

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             GKA    +A  + +EM + G  PD  +Y+ L++         EALS    M E  C  
Sbjct: 485 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544

Query: 193 DLTTCNIMID 202
           D+ + NI+++
Sbjct: 545 DINSYNIILN 554



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 2/169 (1%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R+  +  W    +E+  SPS F Y++++    +  + E A  L +EM ++G  P    Y 
Sbjct: 386 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 445

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           +LI   GK   +D A    Q+++++  S    +Y+ +I+   K      AI++F  +   
Sbjct: 446 SLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKL 505

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           G  PD+ AYN +++   +  +  EA   +  M+E G  PD  SY+ +LN
Sbjct: 506 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 52/89 (58%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S   Y V+++++ +A + + A  +FDEM + G APD Y Y+ L++   + GM D A+S
Sbjct: 473 SSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALS 532

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSD 104
            +++M++     D+  Y+ ++   +K  D
Sbjct: 533 TMRRMQEHGCIPDINSYNIILNGLQKQED 561


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 206/451 (45%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P    + ++++ +    +   A    D++  +G   D+ +Y TLI    + G   +A+
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++++   V  ++V+YS +I+   K    + A  ++  + S  I PD+V Y+++I+ F
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 K A  L   M    + P+  ++S L++ + +  K  EA +V A M + N  LD+
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y  +     A  LF  M + G+ P V SY+ ++  + + ++  EA+ LF  
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K+I  NVVTYN+++    KS     A  L+ EM +RG   N ITY++I+    K   
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D+A +L  K++  G+                               QP+       I  
Sbjct: 424 VDKAIVLLTKIKEKGI-------------------------------QPDIFTYTVLING 452

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+++A  VF      G   +I  +  +I  F     +   + +  KM+  G  P+
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    ++++S  +  E + A+ L  EM   G
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 233/487 (47%), Gaps = 16/487 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +  +L ++L+AKQ++ A  L  +M   GI PD  T + L+ CF + G    + S 
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             ++ +     D V ++ LI+      +  KA+    ++ + G   D V+Y T+IN   +
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K A  L+  +  + V+P+ V YST+++   ++    +A  ++ EM       D+ T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  +  +   K A  LF  M    I+P+V +++ L+  + +     EA ++  +M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K ++ +VVTYN+++  Y    +  KA +L   M  RG+ P+  +YS +I  + K   +D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL---LHELRQP-NTIPRETAI 372
            A  LF+++    +  + V Y +++    + G  + A  L   +H+  QP N I   + +
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + +   +++A  +  +  + G   DI  +  +I    +  +  +  +VFE +   GY 
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+ +    ++N +     F+    + S+M++ GC+  + + +++L           + SL
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI-PNAITYEIL-----------IHSL 523

Query: 493 FERLDSD 499
           FE+ ++D
Sbjct: 524 FEKDEND 530



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 162/317 (51%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP V  Y+ ++       + + A  LF+ M    I P+ YT+S LI  F KEG    A
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M +  V  D+V Y++L++    +   +KA S+F+ +   G+ PD+ +Y+ MIN 
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K K+  EA  L EEM  + + P+ V+Y++L++   ++ +   AL +  EM++   P +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N ++D   + +    A  L   +++ GI P + +Y  L+    +     +A  +F 
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K    N+ TY ++I  +      ++   ++ +M++ G  PNAITY  +I    +  
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527

Query: 314 KLDRAAMLFQKLRSSGV 330
           + D+A  L +++ + G+
Sbjct: 528 ENDKAEKLLREMIARGL 544



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L  I E+    P +F Y V++  + +  + + A  +F+++  +G +P+ YTY++L
Sbjct: 426 KAIVLLTKIKEKG-IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           I  F  +G FD  ++ L +M+ +    + + Y  LI 
Sbjct: 485 INGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 217/465 (46%), Gaps = 22/465 (4%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+ +V AY  V+  + +  + + A  +FD+M+Q+GI P +Y+Y++LI+ F K    + A+
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M     + +   Y   I    K  +  KAI  +  +KS GIVPD+VA N ++   
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSL 471

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K+     A+ +  E++  GV PD ++Y+ ++    +     EA+ VF+EM E  C  D+
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV 531

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +ID   +     +A ++F  +++M +DP+  +YNTLL   G      E +HL   
Sbjct: 532 LAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEE 591

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       N++TYNT++    K+ E   A  ++  M  +G  P+  +Y+T +    K  +
Sbjct: 592 MNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDR 651

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAI- 372
           L  A  +F +++   +  D     T++ ++ + GL+  A   L E + QP +    ++  
Sbjct: 652 LTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFH 710

Query: 373 ----TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                IL RAG  +   +    A     + D      +I    ++KK     E+ +K  S
Sbjct: 711 SLMEGILKRAGMEKSIEFAENIALSRILLDDF-FLSPLIRHLCKSKKALEAHELVKKFES 769

Query: 429 AGYFPDSHIIALVLNSYGKL-------REFETADDLYSEMQEEGC 466
            G       ++L   SY  L          + A+ L+SEM+  GC
Sbjct: 770 LG-------VSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGC 807



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 213/471 (45%), Gaps = 5/471 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   + +EA    + + YN ++  ++++     A  ++  M   GI P   TYS L
Sbjct: 164 RSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVL 223

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK  + ++ +  L++ME   V  ++  Y+  I +  +   + +A  I  +++  G 
Sbjct: 224 MLAFGKRDV-ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGC 282

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+V    +I +   A    +A+ +  +M+    KPD V+Y TLL+   +N      + 
Sbjct: 283 KPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIE 342

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++     ++D   Q+    +A  +F  M++ GI+P   SYN+L+  + 
Sbjct: 343 IWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFL 402

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A+    A+ LF  M       N  TY   I  YGKS E  KA    + M+++GI P+ +
Sbjct: 403 KADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVV 462

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++    K+G+L  A  +F +L+S GV  D + Y  MI    +      A ++  E+
Sbjct: 463 AGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEM 522

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +   +P   A    I  L +AGR  EA  +F +  +         +  ++    R  K 
Sbjct: 523 IETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKV 582

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M S  Y P+      VL+   K  E   A  +   M  +GC+
Sbjct: 583 KEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCM 633



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 235/514 (45%), Gaps = 8/514 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V A N VL ++ ++ +  +A  +F E++  G+ PD  TY+ +I C  K    D A+  
Sbjct: 459 PDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKV 518

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M + R   D++  ++LI+   K    ++A  IF  LK   + P    YNT++   G+
Sbjct: 519 FSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGR 578

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KE   L+EEM      P+ ++Y+T+L+   +N +   AL +   M    C  DL++
Sbjct: 579 EGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSS 638

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-LM 255
            N  +    + D   +A R+F  M+K+ + P   +  T+L  + +  L  EA+H  +  +
Sbjct: 639 YNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYI 697

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +   + +  +++++++   K    EK+    + +    I  +    S +I    K+ K 
Sbjct: 698 LQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKA 757

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI- 374
             A  L +K  S GV +    Y  +I       L+  A+ L  E+++    P E    + 
Sbjct: 758 LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817

Query: 375 ---LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
              + ++ RIE+   V ++    G       +  +I    ++K     ++++ K+ S G+
Sbjct: 818 LDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGF 877

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P       +L+   K  + E A+DL+ EM + GC  +  ++  +L+ Y    +   +  
Sbjct: 878 SPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCE 937

Query: 492 LFERLDSDSNINKK-ELHHVVAGIYERANRLNDA 524
           LF+ +  D  IN   + + V+ G    A RLND+
Sbjct: 938 LFQNM-VDQGINPDIKSYTVLIGALCTAGRLNDS 970



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 214/474 (45%), Gaps = 12/474 (2%)

Query: 38  AHG-------LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           AHG       +FD M+++ +  +  T+ T+    G EG   SA   L  M++  +  +  
Sbjct: 124 AHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSY 183

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
            Y+ LI    K     +A+ ++  + + GIVP +  Y+ ++  FGK  + +    L+ EM
Sbjct: 184 TYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDV-ETVVWLLREM 242

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
            + GVKP+  SY+  + +  +  +F EA  +  +M +  C  D+ T  ++I +       
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
            DA  +FW M+     P  V+Y TLL   G+       I ++  M+      NVV Y  +
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAV 362

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +    +    ++A+++  +M+ +GIEP   +Y+++I+ + KA +L+ A  LF  +   G 
Sbjct: 363 VDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGP 422

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             +   Y   I  Y + G    A +    ++     P+ +     +  LA++GR+  A  
Sbjct: 423 TPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKR 482

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           VF +    G   D   +  MI+  S+       ++VF +M      PD   +  ++++  
Sbjct: 483 VFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLY 542

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           K      A  ++ E++E     +D  +  +L+  G       +  L E ++S+S
Sbjct: 543 KAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNS 596



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 206/494 (41%), Gaps = 41/494 (8%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E R  P V A N ++  + +A +   A  +F E+++  + P   TY+TL+   G+EG   
Sbjct: 524  ETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVK 583

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  L++M  +    +L+ Y+ +++   K  + + A+ +   +   G +PDL +YNT +
Sbjct: 584  EVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTAL 643

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM------ 185
            +   K     EA  +  +M++  + PD  +  T+L  +V+N    EAL    E       
Sbjct: 644  HGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS 702

Query: 186  ---------------------NEVNCPLDLTTCNIMIDVY---------GQLDMAKDADR 215
                                   +    ++    I++D +          +   A +A  
Sbjct: 703  KADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHE 762

Query: 216  LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            L      +G+     SYN L+    +  L   A  LF  M+R   + +  TYN ++   G
Sbjct: 763  LVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMG 822

Query: 276  KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
            KS+  E    + +EM  +G E   +TY+TII+   K+  L  A  L+ KL S G    P 
Sbjct: 823  KSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPC 882

Query: 336  LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQA 391
             Y  ++    + G +  A+ L  E+      P      IL      AG  E+   +F+  
Sbjct: 883  TYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM 942

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             D G   DI  +  +I       +  + +  F ++   G  PD     L+++  G+    
Sbjct: 943  VDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRL 1002

Query: 452  ETADDLYSEMQEEG 465
            E A  L+++M++ G
Sbjct: 1003 EEAVSLFNDMEKSG 1016



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 211/465 (45%), Gaps = 6/465 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P + +YN  L  +++  +   A  +F +M++  +APD  T  T++  F K G+ + A+  
Sbjct: 634  PDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHT 692

Query: 77   LQQ-MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++ + Q     D   + +L+E   K +   K+I     +  S I+ D    + +I    
Sbjct: 693  LKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLC 752

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K+K   EA  L+++    GV   T SY+ L+   V+ +    A  +F+EM  + C  D  
Sbjct: 753  KSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEF 812

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T N+++D  G+    +D  ++   M   G + + V+YNT++    ++++  EA+ L+  +
Sbjct: 813  TYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKL 872

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              +       TY  ++    K  + E A +L  EM + G +PN   Y+ ++  +  AG  
Sbjct: 873  MSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNT 932

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            ++   LFQ +   G+  D   Y  +I A    G +  +     +L     +P+ I     
Sbjct: 933  EKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLL 992

Query: 372  ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            I  L R+GR+EEA  +F     +G   ++  +  +I    +  K A   +++E++   G+
Sbjct: 993  IHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW 1052

Query: 432  FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
             P+      ++  Y      + A   Y +M   GC  +   + Q+
Sbjct: 1053 KPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 182/387 (47%), Gaps = 10/387 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V    V+++ +  A +   A  +F +M+     PDR TY TL+   G  G  
Sbjct: 278 EDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDS 337

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            S I     M+ D  + ++V Y+ +++   ++    +A  +F ++K  GI P   +YN++
Sbjct: 338 RSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL 397

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA     A  L   M   G  P+  +Y   +N Y ++ + ++A+  +  M     
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGI 457

Query: 191 PLDLTTCNIM---IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             D+   N +   +   G+L MAK   R+F  ++ +G+ P  ++Y  +++   +A    E
Sbjct: 458 VPDVVAGNAVLYSLAKSGRLGMAK---RVFHELKSIGVCPDNITYTMMIKCCSKASNADE 514

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  M       +V+  N++I    K+    +A  +  E++   ++P   TY+T++A
Sbjct: 515 AMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLA 574

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             G+ GK+     L +++ S+    + + Y T++    + G V +A  +L+ +     +P
Sbjct: 575 GLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMP 634

Query: 368 R----ETAITILARAGRIEEATWVFRQ 390
                 TA+  L +  R+ EA  +F Q
Sbjct: 635 DLSSYNTALHGLVKEDRLTEAFRIFCQ 661



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 177/390 (45%), Gaps = 12/390 (3%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++EL R          +F  ++   +  ++  + T+    G     + A + +  M+E G
Sbjct: 118 MLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  ++ +Y+ L+   V++    EA+ V+  M        + T ++++  +G+    +D +
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK----RDVE 233

Query: 215 RLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            + W +R+M   G+ P+V SY   +RV G+A  F EA  + + M+ +  + +VVT   +I
Sbjct: 234 TVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLI 293

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           +I   +     A ++  +M+    +P+ +TY T++   G  G       ++  +++ G  
Sbjct: 294 QILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYN 353

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWV 387
            + V Y  ++ A  +VG V  A  +  +++Q    P++    + I+   +A R+  A  +
Sbjct: 354 DNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALEL 413

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F      G   +   +   I  + ++ +    I+ +E M+S G  PD      VL S  K
Sbjct: 414 FNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAK 473

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQML 477
                 A  ++ E++  G V  D + + M+
Sbjct: 474 SGRLGMAKRVFHELKSIG-VCPDNITYTMM 502



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 106/225 (47%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y  +   YN ++  ++++K    A  L+ ++   G +P   TY  L+    K+G  + A 
Sbjct: 842  YESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                +M       +  +Y+ L+   R   +  K   +F  +   GI PD+ +Y  +I   
Sbjct: 902  DLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGAL 961

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              A    ++     ++ E G++PD ++Y+ L++    + +  EA+S+F +M +     +L
Sbjct: 962  CTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNL 1021

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             T N +I   G+   A +A +++  + K G  P+V +YN L+  Y
Sbjct: 1022 YTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY 1066



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 6/224 (2%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            +SP+   Y  +L  +L+  + E A  LFDEM   G  P+R  Y+ L+  +   G  +   
Sbjct: 877  FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVC 936

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               Q M    ++ D+  Y+ LI         + ++S F +L   G+ PDL+ YN +I+  
Sbjct: 937  ELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            G++   +EA  L  +M + G+ P+  +Y++L+    +  K  EA  ++ E+ +     ++
Sbjct: 997  GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNV 1056

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTL 235
             T N +I   G   ++   D  F S  +M   G  P+  +Y  L
Sbjct: 1057 FTYNALI---GGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 73/152 (48%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P + +Y V++  +  A +   +   F ++ + G+ PD  TY+ LI   G+ G  + A+S
Sbjct: 948  NPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVS 1007

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                ME+  ++ +L  Y++LI    K    ++A  ++  L  +G  P++  YN +I  + 
Sbjct: 1008 LFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYS 1067

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
             +     A     +M   G  P++ +Y  L N
Sbjct: 1068 VSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/498 (23%), Positives = 222/498 (44%), Gaps = 53/498 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ ++N ++  +++  + ++A  LF   +  G+  + YTY+ +I    K+G +++ +  
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 77  LQQMEQDRVSGDLVLYSNLIELARK----------LSDY--------------------- 105
             +M++  V  D   Y+  IE   K          L DY                     
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307

Query: 106 ----SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                +A S+F  ++  G+VPD+  Y  +++ +  ++ F +A  + + M  +G+K + V 
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           +S +L+   E  + +E + +F E  E    +D    NI+ D   +L    DA  +   ++
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            M +D  +  Y TL+  Y       EA  LF+ M+ +  + +VV YN +   + ++    
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +L+  M+++G+EPN+ T+  II     AGK++ A   F  L+   VEI   +Y  ++
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547

Query: 342 VAYERVGLVAHAKRLLHELRQ--------------PNTIPRETAITILARAGRIEEATWV 387
             Y    L+  +    HEL++              P+ +      T L   G +E A  +
Sbjct: 548 NGYCEAALIEKS----HELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTL 603

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F      G   D   +  MI  + +        E+F+ M+  G  PD+    +++N Y K
Sbjct: 604 FNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCK 663

Query: 448 LREFETADDLYSEMQEEG 465
           +     A +L+ +M+E G
Sbjct: 664 MNCLREAHELFKDMKERG 681



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 180/432 (41%), Gaps = 45/432 (10%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           +AY  V+R      + + A  +F EM ++G+ PD Y Y  L+  +     FD A++  + 
Sbjct: 296 YAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKS 355

Query: 80  MEQDRVSGDLVLYSNLI----ELAR-------------------------------KLSD 104
           M    +  + V++S ++    E+ R                               KL  
Sbjct: 356 MISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGK 415

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              A+ +   LKS  +  D+  Y T+IN +       EA+ L +EM E+G KPD V+Y+ 
Sbjct: 416 VDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNV 475

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L   +  N    EA+ +   M       + TT  I+I+        ++A+  F  ++   
Sbjct: 476 LAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGES 535

Query: 225 IDPSVVSYNTLLRVYGEAEL------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
           ++ SV  Y  L+  Y EA L        EA  L R M    ++ + V Y+ +      + 
Sbjct: 536 VEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNG 595

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E A  L     + G  P+A+TY+ +I  + K   L  A  LF+ ++  G+  D V Y 
Sbjct: 596 NMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYT 655

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            MI  Y ++  +  A  L  ++++    P+ I     I  L  +G  E A  ++ +  D 
Sbjct: 656 IMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDM 715

Query: 395 GEVKDISVFGCM 406
           G     ++  C+
Sbjct: 716 GMTPGATLKRCI 727



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/418 (21%), Positives = 180/418 (43%), Gaps = 38/418 (9%)

Query: 67  EGMFDSAISWLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + MF  AI +L Q  ++ V   +++ ++ LI    K  +   A+ +F R KS G++ +  
Sbjct: 167 QNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEY 226

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y  +I    K   ++    + +EM+E GV  D+  Y+T +    +N++     +V  + 
Sbjct: 227 TYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDY 286

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
              N  +       +I  +       +A+ +F  M K G+ P V  Y  L+  Y  +  F
Sbjct: 287 RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNF 346

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEKATNLMQEMQNRGIEPNAITY 302
            +A+ +++ M  + I+ N V ++ ++      G++LE     ++ +E +  G+  +   Y
Sbjct: 347 DKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALE---VVDMFEEFKESGLFIDRKAY 403

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + +     K GK+D A  +  +L+S  +++D   Y T+I  Y   G    A+ L  E+ +
Sbjct: 404 NILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEE 463

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
               P   A  +LA AG                              F RN+     +++
Sbjct: 464 RGFKPDVVAYNVLA-AG------------------------------FFRNRTDFEAMDL 492

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
              M S G  P+S    +++       + E A++ ++ ++ E    S +++  +++ Y
Sbjct: 493 LNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGY 550



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 6/233 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE  + P V AYNV+     R +    A  L + M  +G+ P+  T+  +I      G  
Sbjct: 462 EERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKV 521

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIE------LARKLSDYSKAISIFSRLKSSGIVPDL 124
           + A  +   ++ + V   + +Y+ L+       L  K  +  +A  +   +    + P  
Sbjct: 522 EEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSK 581

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V Y+ +          + A  L       G  PD V+Y+ ++N Y + +   EA  +F +
Sbjct: 582 VMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKD 641

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           M E     D  T  IMI+ Y +++  ++A  LF  M++ GI P V++Y  +++
Sbjct: 642 MKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIK 694



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    PS   Y+ +   +      E AH LF+     G  PD  TY+ +I  + K     
Sbjct: 574 EMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLP 633

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + M++  ++ D V Y+ +I    K++   +A  +F  +K  GI PD++AY  +I
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKP 157
                +   + A  L  EM + G+ P
Sbjct: 694 KGLLNSGHTEIAFQLYNEMIDMGMTP 719


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 220/478 (46%), Gaps = 30/478 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F YN ++  + +  + E    +  EM   G+ PD+Y+Y+TLI  + +EG    A    
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M ++ ++   + Y+ L++    L     A+ ++  +   G+ P+ ++ +T+++   KA
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              ++A  L +E   +G+  + ++++T++N   +  +  EA  +   M E+ CP D  T 
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             + D Y +L     A  L   M  +G  PSV  +N+ +  +  A+ + +   +   M  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  N+VTY  +I  + K     +A NL  EM N G+ PN    S +++ + K GK+D 
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 318 AAMLFQKLRS---------SGVEIDP-----------------VLYQTMIVAYERVGLVA 351
           A ++ QKL +         S +EID                  V++  +I    + G +A
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            AK L   LR     P+     + I   A +G I+EA  +      AG   +I  +  +I
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               ++ K +  + +F K++S G  P+      +++ Y K  +   A  L  +M EEG
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 220/454 (48%), Gaps = 5/454 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N +L  ++++    +A  ++ +MR  G+ PD +T + +   + ++G    A+ +
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   +  +LV Y  +++    +     A  I   L+  G+ P++V Y  ++  + K
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +EA  +++EM+E G +  D V+Y  ++N Y +  +  +A  V  EM +    ++L 
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N MI+   +L   ++  ++   M  +G+ P   SYNTL+  Y       +A  + R+M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R  +    +TYNT++K +      + A  L   M  RG+ PN I+ ST++    KAGK 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           ++A  L+++  + G+  + + + T+I    ++G +A A+ LL  +++    P+++   T 
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + G++  AT +  +    G    + +F   I      K++  V ++  +M + G 
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+      ++  + K      A +LY EM   G
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 201/460 (43%), Gaps = 27/460 (5%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP------ 157
           D   A+ +F RL  S   P LV++  ++++  +A+ F +AR L+  +     +P      
Sbjct: 83  DPDAALHLF-RLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPH-AEPLFPHLA 138

Query: 158 --------DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
                     VS+  LL  + +  +   AL+VF  M +V C   L +CN +++   Q   
Sbjct: 139 EVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGD 198

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
              A  ++  MR  G+ P   +   + + Y       +A+     M+   +E N+V Y+ 
Sbjct: 199 PGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  Y      E A  +++ +Q +G+ PN +TY+ ++  + K G+++ A  + ++++ +G
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318

Query: 330 -VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEA 384
            + +D V Y  MI  Y + G +  A R+ +E+R      N     T I  L + GR+EE 
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             V ++  D G   D   +  +I+ + R        E+   M   G    +     +L  
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERLDSDSNI 502
           +  L   + A  L+  M + G V  +++    L   L+ A K    L    E L      
Sbjct: 439 FCSLHAIDDALRLWFLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
           N    + V+ G+  +  R+ +A  +++RM + R    SL 
Sbjct: 498 NVITFNTVINGLC-KIGRMAEAEELLDRMKELRCPPDSLT 536



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 77/362 (21%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E   ++PSV  +N  +     AKQW   + +  EM  RG++P+  TY  LI  + KEG  
Sbjct: 561 EHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNL 620

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------- 122
             A +   +M  + ++ ++ + S L+    K     +A  +  +L +  ++P        
Sbjct: 621 HEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIE 680

Query: 123 --------DLVA------YNTMINV--FG--KAKLFKEARLLIEEMREQGVKPDTVSYST 164
                   D +A       N M NV  FG  K+    +A+ L E +R +   PD  +YS+
Sbjct: 681 IDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++    +    EA S                   + DV                M   G
Sbjct: 741 LIHGCAASGSIDEAFS-------------------LRDV----------------MLSAG 765

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEH- 280
           + P++++YN+L+    ++     A++LF  +Q K I  N +TYNT+I  Y   GK+ E  
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 281 ------------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
                       E+A  L+ +M    ++PN ITY T+I  + K+G ++  + L+ ++   
Sbjct: 826 KLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 885

Query: 329 GV 330
           G+
Sbjct: 886 GL 887



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 17/198 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++D I +   +S +V  +NV++  + ++ +   A  LF+ +R +   PD +TYS+LI   
Sbjct: 687 VVDTIADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G  D A S    M    ++ +++ Y++LI    K    S+A+++F++L+S GI P+ 
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 125 VAYNTMINVFGK----AKLFK------------EARLLIEEMREQGVKPDTVSYSTLLNL 168
           + YNT+I+ + K     + FK            EA  L+++M E  V P+ ++Y TL++ 
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 865

Query: 169 YVENHKFVEALSVFAEMN 186
           Y+++    E   ++ EM+
Sbjct: 866 YIKSGNMEEISKLYDEMH 883


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 212/497 (42%), Gaps = 36/497 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + Y  ++R +    +   A  L D+M QRG  P   TY+ L+    K   F  A++ 
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 198

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M     + ++V Y+ +I    +      A  I +RL S G  PD+V+Y T++     
Sbjct: 199 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA 258

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ + + ++L  EM ++   P+ V++  L+  +        A+ V  +M++  C  + T 
Sbjct: 259 ARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 318

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           CNI+I+   +     DA     +M   G +P  +SY T+LR    A  +  A  L   M 
Sbjct: 319 CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 378

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG---------------------- 294
           RK    N VT+NT I I  +    E+A  L++ M   G                      
Sbjct: 379 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 438

Query: 295 ----------IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
                      EPN ITY+T++     A +LD AA L   +      ++ V +  ++  +
Sbjct: 439 SALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFF 498

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G V  A  L++++ +    PN I   T +  + +    EEA  +       G   D 
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +  ++++ SR  +    I++   ++  G  P   +   +L +  K  E + A D ++ 
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 618

Query: 461 MQEEGCVFSDQVHFQML 477
           M   GC+ ++  +  ++
Sbjct: 619 MVSNGCMPNESTYIILI 635



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 212/500 (42%), Gaps = 13/500 (2%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LR ++       A  L +    RG APD Y  + LI    + G    A   L+  E    
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             D+  Y+ L+        Y +  +    + S  + PD   Y  +I          +A  
Sbjct: 106 PVDVFAYNTLVA---GYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+++M ++G +P  V+Y+ LL    ++  F EA++V  EM    C  ++ T N++I+   
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     DA  +   +   G  P +VSY T+L+    A  + +   LF  M  K+   N V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++ +++ + +    E+A  ++Q+M   G  PN    + +I    K G++D A      +
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRI 381
              G   D + Y T++    R G   HAK LL E+ + N  P E    T I IL + G I
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+A  +     + G    I  +  ++  F    +  + +E+F  +      P++     +
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTL 459

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSD 499
           L         + A +L + M ++ C   + V F +L  +  +K F    +E + + ++  
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPL-NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518

Query: 500 SNINKKELHHVVAGIYERAN 519
              N    + ++ GI +  N
Sbjct: 519 CTPNLITFNTLLDGITKDCN 538



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 195/454 (42%), Gaps = 40/454 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P + +Y  VL+ +  A++W+    LF EM  +   P+  T+  L+  F + GM + AI
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             LQQM Q   + +  L + +I    K      A    + +   G  PD ++Y T++   
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A  ++ A+ L+ EM  +   P+ V+++T + +  +     +A+ +   M E  C + +
Sbjct: 362 CRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI 421

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T N ++    V G++D A +   LF     +  +P+ ++Y TLL     AE    A  L
Sbjct: 422 VTYNALVHGFCVQGRVDSALE---LF---NNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M +K+   N VT+N ++  + +    E+A  L+ +M   G  PN IT++T++    K
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
               + A  L   L S GV +D + Y ++                               
Sbjct: 536 DCNSEEALELLHGLVSKGVSLDTITYSSV------------------------------- 564

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           + +L+R  R EEA  +     D G    + ++  ++    +  +    I+ F  M S G 
Sbjct: 565 VDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGC 624

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+     +++         + A  + SE+  +G
Sbjct: 625 MPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 149/326 (45%), Gaps = 5/326 (1%)

Query: 7   DWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           D++N    Y  +P   +Y  VLR + RA +WE A  L  EM ++   P+  T++T I   
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 396

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            ++G+ + AI  ++ M +   S  +V Y+ L+           A+ +F+ L      P+ 
Sbjct: 397 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNT 453

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + Y T++     A+    A  L+  M ++    + V+++ L++ + +     EA+ +  +
Sbjct: 454 ITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 513

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M E  C  +L T N ++D   +   +++A  L   +   G+    ++Y++++ V    + 
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 573

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EAI +   +Q   +   V  YN ++    K  E ++A +    M + G  PN  TY  
Sbjct: 574 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 633

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +I      G L  A  +  +L + GV
Sbjct: 634 LIEGLAHEGLLKEARYVLSELYAKGV 659



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 42/290 (14%)

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L++   +RG  P+    + +I    + G+   AA + +   +SG  +D   Y T++
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116

Query: 342 VAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
             Y R G +  A+RL+  +   P+       I  L   GR+ +A  +       G    +
Sbjct: 117 AGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSV 176

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP-------------------DSHIIALV 441
             +  ++E   ++  +   + V ++MR+ G  P                   D+  I   
Sbjct: 177 VTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNR 236

Query: 442 LNSYG----------------KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           L+SYG                  R ++    L++EM ++ CV  ++V F ML  +  R  
Sbjct: 237 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDMLVRFFCRG- 294

Query: 486 FNMLE---SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
             M+E    + +++          L ++V     +  R++DA   +N M 
Sbjct: 295 -GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 343


>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 213/440 (48%), Gaps = 11/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + ++Y  +L+  LR +  + A G++ +M + G + D + ++ L+    K+   D A    
Sbjct: 187 NAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVF 246

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M++     D   Y+ +I +  K     +++++F  +   G   +L+AYNTMI    K 
Sbjct: 247 EDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKG 306

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           ++  +A LL  +M E G +P+  +YS LLN+ V   + +  L    EM++    ++    
Sbjct: 307 RMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ-LNKLDNIVEMSKKY--MNKQIY 363

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              +    +L  + +A RLF +M  +       +Y ++L     +    EAI L      
Sbjct: 364 AYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHE 423

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K I  + + YNT+    G+  +     +L ++M+  G  P+  TY+ +I+ +G+AG++D 
Sbjct: 424 KCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDS 483

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  +F++L +S  + D + Y ++I    + G V  A     E+++    P+ +   T I 
Sbjct: 484 AVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIE 543

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +  ++E A  +F +    G   ++  +  +++   R+ + A  ++++ K++  G  P
Sbjct: 544 CFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 603

Query: 434 DSHIIALV--LNS--YGKLR 449
           DS   A++  L S  +GKLR
Sbjct: 604 DSITYAVLERLQSGRHGKLR 623



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 34/400 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           YS  +FA+N++L  + + ++ + A+ +F++M++R   PD +TY+ +I   GK G  D ++
Sbjct: 219 YSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESL 278

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +  Q M +   + +L+ Y+ +IE   K     KA+ +FS++  +G  P+   Y+ ++NV 
Sbjct: 279 ALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVL 338

Query: 135 -GKAKLFK-------------------------------EARLLIEEMREQGVKPDTVSY 162
             + +L K                               EA  L   M     K D  +Y
Sbjct: 339 VAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAY 398

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            ++L     + K  EA+ +    +E     D    N +    G+L        L+  M++
Sbjct: 399 MSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQ 458

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P + +YN L+  YG A     A+ +F  ++    + +V++YN++I   GK+ + ++
Sbjct: 459 DGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDE 518

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A    +EMQ +G+ P+ +TYST+I  +GK  K++ A  LF ++ + G   + V Y  ++ 
Sbjct: 519 AHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLD 578

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILAR--AGR 380
             ER G  A A  L  +L+Q    P      +L R  +GR
Sbjct: 579 CLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGR 618



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 165/343 (48%), Gaps = 7/343 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  ++ ++ AYN ++  + + +  + A  LF +M + G  P+ +TYS L+     EG  +
Sbjct: 286 EKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLN 345

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  + +M +  ++  +  Y+  +    KL   S+A  +F  + +     D  AY +M+
Sbjct: 346 K-LDNIVEMSKKYMNKQI--YAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSML 402

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                +    EA  L+    E+ +  DT+ Y+T+        +      ++ +M +   P
Sbjct: 403 ESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPP 462

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T NI+I  YG+      A ++F  +      P V+SYN+L+   G+     EA   
Sbjct: 463 PDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMR 522

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ MQ K +  +VVTY+T+I+ +GK+ + E A +L  EM   G  PN +TY+ ++    +
Sbjct: 523 FKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLER 582

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           +G+   A  L+ KL+  G+  D + Y  +    ER+    H K
Sbjct: 583 SGRTAEAVDLYAKLKQQGLTPDSITYAVL----ERLQSGRHGK 621



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/489 (20%), Positives = 208/489 (42%), Gaps = 45/489 (9%)

Query: 85  VSGDLVLYSNL-IELARKLSD--YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  D  +Y+ L + L+R  S   + +  S+   ++  G+   +   N +I  FG      
Sbjct: 117 LKNDPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFG------ 170

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +    +  +++ G++ +  SY  LL  Y+      +A  V+ +M      LD+   N+++
Sbjct: 171 DLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLL 230

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D   +      A ++F  M++   +P   +Y  ++R+ G+A    E++ LF+ M  K   
Sbjct: 231 DALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFT 290

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR---- 317
            N++ YNTMI+   K    +KA  L  +M   G +PN  TYS ++ +    G+L++    
Sbjct: 291 LNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNI 350

Query: 318 ----------------------------AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
                                       A  LF  + +   + D   Y +M+ +    G 
Sbjct: 351 VEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGK 410

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +A A  LL+   +     +TI   T  T L R  ++     ++ +    G   DI  +  
Sbjct: 411 IAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNI 470

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I  + R  +  + +++FE++ ++   PD      ++N  GK  + + A   + EMQE+G
Sbjct: 471 LISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKG 530

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
                  +  ++  +G      M  SLF+ + ++        ++++    ER+ R  +A 
Sbjct: 531 LNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAV 590

Query: 526 RIMNRMNKR 534
            +  ++ ++
Sbjct: 591 DLYAKLKQQ 599


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 209/457 (45%), Gaps = 11/457 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           AR+ P      VV++++    + + A  L +EM  RG+A +  TYS L+    K    D 
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 127

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++ ++ M +   +  +V Y+++I    +     +A     ++ + G  PD++ Y  +I 
Sbjct: 128 AVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIG 187

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K++       L+ E+  +G  PD V+YST+++   +  +  +A+ +F EM   +C  
Sbjct: 188 GFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAP 244

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N +I  Y +     +A RL   M      P VV+Y TL+  + +     +A  LF
Sbjct: 245 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELF 304

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M   ++  +VVT+ +++         E A  L++E+  RG  P   TY+ ++  + KA
Sbjct: 305 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKA 364

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            ++ +A  L    RS G   + V Y  ++    R G    A + L +L      P  T++
Sbjct: 365 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG-PCPTSV 423

Query: 373 TI-------LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
            +       L R GR ++A   + +    G V   + F  ++    +  +     E+ E+
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           M   G+ P       V+++Y +    + AD+L SE++
Sbjct: 484 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 208/459 (45%), Gaps = 13/459 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDS 72
           + P    Y  ++  + +A++   A  +  EM      PD  T + ++   C G     D 
Sbjct: 35  HPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDR--VDD 92

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   +++M    ++ + + YS L++   K     +A+++   +   G  P +V YN++I 
Sbjct: 93  ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F +A+   EA   +E+M  +G  PD ++Y+ L+  + ++      L +  E+       
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T + +ID   +    +DA  +F    +M   P+ ++YN+L+  Y  A    EAI L 
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLL 269

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M   +   +VVTY T++  + K    + A  L Q+M    + P+ +T+++++      
Sbjct: 270 GKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 329

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           G+++ A  L +++   G       Y  ++  Y +   V  A+ L+ + R     PNT+  
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY 389

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKM 426
              +    RAGR ++A     Q    G     SV  +  +++   R+ +  + ++ +E+M
Sbjct: 390 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              GY P +   A V+ +  K  + + A +L  EM + G
Sbjct: 450 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 188/454 (41%), Gaps = 78/454 (17%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +NVV+  + RA +   A G++ +M      PD  TY+ L+    K         
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSK--------- 51

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                                  AR+L D   A+ +   + S+  VPD      ++    
Sbjct: 52  -----------------------ARRLRD---AVQVLQEMVSARHVPDNTTLTVVVQSLC 85

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 +AR L+EEM  +G+  + ++YS L++   +  +  EA+++   M E  C     
Sbjct: 86  LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCA---- 141

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                                          P+VV+YN+++  +  A    EA      M
Sbjct: 142 -------------------------------PTVVTYNSIITGFCRARRVDEAHGFMEQM 170

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    +++TY  +I  + KS +  +   L+ E+  RG  P+ +TYST+I    KAG+L
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
             A  +F+++  +   I    Y ++I  Y R G +  A RLL ++      P+ +   T 
Sbjct: 231 RDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTL 287

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           ++   + GR+++A  +F+Q        D+  F  +++      +  + +E+ E++   G 
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P  +    V++ Y K  +   A++L ++ +  G
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 37/320 (11%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I EE   +P+   YN ++    RA   + A  L  +M     APD  TY+TL++ F K G
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A    QQM  +++S D+V +++L++          A+ +   +   G  P +  YN
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +++ + KA   ++A  L+ + R +G  P+TV+Y+ L+       +  +AL    ++N  
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 189 N--CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              CP  +    I++D   +     DA + +  M + G  P+  ++ T+           
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV----------- 464

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
               +F L                     K+ + ++A  L++EM   G  P   T   ++
Sbjct: 465 ----VFALC--------------------KAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500

Query: 307 AIWGKAGKLDRAAMLFQKLR 326
           + + +AG + +A  L  +LR
Sbjct: 501 SAYCRAGMIQKADELASELR 520



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/414 (19%), Positives = 163/414 (39%), Gaps = 35/414 (8%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP----------------------- 191
           + P T+ ++ ++       +   AL V+ +MN+ + P                       
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 192 -----------LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                       D TT  +++      D   DA  L   M   G+  + ++Y+ L+    
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + E   EA+ L   M  +     VVTYN++I  + ++   ++A   M++M   G  P+ I
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ +I  + K+  + R   L  ++   G   D V Y T+I    + G +  A  +  E+
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 361 R-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P  I   + I    RAG ++EA  +  +  D     D+  +  ++  F +  +  + 
Sbjct: 241 SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E+F++M +    PD      +++        E A +L  E+   GC  +   +  ++  
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           Y         E L     S   +     ++++     RA R + A + ++++N 
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 414


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 221/452 (48%), Gaps = 4/452 (0%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            +V +YN+V+  V +  + + AH L   M  +G  PD  +YST++  + + G  D     +
Sbjct: 688  NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 78   QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            + M++  +  +  +Y ++I L  ++   ++A   FS +   GI+PD V Y T+I+ F K 
Sbjct: 748  EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807

Query: 138  KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               + A     EM  + + PD ++Y+ +++ + +    VEA  +F EM       D  T 
Sbjct: 808  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 198  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              +I+ Y +    KDA R+   M + G  P+VV+Y TL+    +      A  L   M +
Sbjct: 868  TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 258  KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              ++ N+ TYN+++    KS   E+A  L+ E +  G+  + +TY+T++  + K+G++D+
Sbjct: 928  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987

Query: 318  AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            A  + +++   G++   V +  ++  +   G++   ++LL+ +      P  T    L +
Sbjct: 988  AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 1047

Query: 378  A----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                   ++ AT +++     G   D   +  +++   + +       +F++M+  G+  
Sbjct: 1048 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 1107

Query: 434  DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                 ++++  + K ++F  A +++ +M+ EG
Sbjct: 1108 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 214/453 (47%), Gaps = 4/453 (0%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y+P V +Y+ V+    R  + +    L + M+++G+ P+ Y Y ++I    +      A 
Sbjct: 720  YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                +M +  +  D V+Y+ LI+   K  D   A   F  + S  I PD++ Y  +I+ F
Sbjct: 780  EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +     EA  L  EM  +G++PD+V+++ L+N Y +     +A  V   M +  C  ++
Sbjct: 840  CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T   +ID   +      A+ L   M K+G+ P++ +YN+++    ++    EA+ L   
Sbjct: 900  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
             +   +  + VTY T++  Y KS E +KA  +++EM  +G++P  +T++ ++  +   G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE-RVGLVAHA---KRLLHELRQPNTIPRET 370
            L+    L   + + G+  +   + +++  Y  R  L A     K +      P+    E 
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 371  AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             +    +A  ++EA ++F++    G    +S +  +I+ F + KK+    EVF++MR  G
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
               D  I     ++  K +  +T  D   E+ E
Sbjct: 1140 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 4/471 (0%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +F E  + G+  +  +Y+ +I    + G    A   L  ME    + D++ YS ++    
Sbjct: 676  VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
            +  +  K   +   +K  G+ P+   Y ++I +  +     EA     EM  QG+ PDTV
Sbjct: 736  RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             Y+TL++ + +      A   F EM+  +   D+ T   +I  + Q+    +A +LF  M
Sbjct: 796  VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               G++P  V++  L+  Y +A    +A  +   M +     NVVTY T+I    K  + 
Sbjct: 856  FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            + A  L+ EM   G++PN  TY++I+    K+G ++ A  L  +  ++G+  D V Y T+
Sbjct: 916  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 341  IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
            + AY + G +  A+ +L E+     QP  +     +      G +E+   +       G 
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              + + F  +++ +           +++ M S G  PD      ++  + K R  + A  
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095

Query: 457  LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
            L+ EM+ +G   S   +  ++  +  RK F     +F+++  +     KE+
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 122/247 (49%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A  SP+V  Y  ++  + +    + A+ L  EM + G+ P+ +TY++++    K G  +
Sbjct: 892  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A+  + + E   ++ D V Y+ L++   K  +  KA  I   +   G+ P +V +N ++
Sbjct: 952  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            N F    + ++   L+  M  +G+ P+  ++++L+  Y   +    A +++ +M      
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 1071

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             D  T   ++  + +    K+A  LF  M+  G   SV +Y+ L++ + + + F EA  +
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 1131

Query: 252  FRLMQRK 258
            F  M+R+
Sbjct: 1132 FDQMRRE 1138



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 83/175 (47%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A  +     Y  ++    ++ + + A  +  EM  +G+ P   T++ L+  F   GM 
Sbjct: 961  EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +     L  M    ++ +   +++L++     ++   A +I+  + S G+ PD   Y  +
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 1080

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            +    KA+  KEA  L +EM+ +G      +YS L+  +++  KF+EA  VF +M
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135


>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 249/547 (45%), Gaps = 45/547 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQW--ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P + ++N ++   L++      LA  L +E+R+ GI PD  TY+TLI+   +E   + A+
Sbjct: 255 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 314

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M   R   DL  Y+ +I +  +     +A  +F  L+S G +PD V YN+++  F
Sbjct: 315 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 374

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +     + + + E+M + G   D ++Y+T++++Y +  +   A  ++++M       D 
Sbjct: 375 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 434

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  ++ID  G+ +M K+A  +   M    + P++ +++ L+  Y +A    EA   F  
Sbjct: 435 VTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDC 494

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R  I+ + + Y+ M+ I  +  E  KA  L QEM     +P+   Y  ++ + GK  +
Sbjct: 495 MLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENR 554

Query: 315 -------------------------------LDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                                           D AA + +   S G E+D     +++ +
Sbjct: 555 EEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGS 614

Query: 344 YERVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGE-VK 398
           Y   G    A+ LL  LR+ ++    +  E  I +L +A ++ +A   + +A D G    
Sbjct: 615 YGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCG 674

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
             +++  ++     N+ +A   ++F  MR  G  P  H+   ++ +Y K+   ETA  L 
Sbjct: 675 SFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLI 734

Query: 459 SEMQEEGCVFSD-QVHFQMLSLYGARKDFNMLESLFERLDS-----DSNINKKELH-HVV 511
            + +E+G +F D  +H  ++  YG  K +   ESL   L       D  +    +H +  
Sbjct: 735 DQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAA 794

Query: 512 AGIYERA 518
           +G YERA
Sbjct: 795 SGCYERA 801



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 212/465 (45%), Gaps = 15/465 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+  +   EA    +V  YN ++    R  ++     L D MR RG  PD  +++TLI
Sbjct: 205 ALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLI 264

Query: 62  TCFGKEGMF--DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
               K G    + AI  L ++ +  +  D++ Y+ LI    + S+  +A+ +++ + +  
Sbjct: 265 NARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHR 324

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PDL  YN MI+V+G+  + +EA  L +++  +G  PD V+Y++LL  +       +  
Sbjct: 325 CQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 384

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  +M ++    D  T N +I +YG+      A +L+  M+  G  P  V+Y  L+   
Sbjct: 385 EICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 444

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+A +  EA  +   M    ++  + T++ +I  Y K+ +  +A      M   GI+P+ 
Sbjct: 445 GKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 504

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS ++ I  +  +  +A  L+Q++     + D  LY+ M+    +        +++ +
Sbjct: 505 LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKD 564

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           + +   +  +   +IL +    + A  + R A   G   D      ++  +  + ++   
Sbjct: 565 MEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEA 624

Query: 420 IEVFEKMR--SAG-----------YFPDSHIIALVLNSYGKLREF 451
            E+ + +R  S+G               +H +   L  YGK R+F
Sbjct: 625 RELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDF 669



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 188/388 (48%), Gaps = 8/388 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           + + ++ +  K +  + A+ IF+R +++     +  YN M+ V+ +   F + + L++ M
Sbjct: 190 MLATILSVLGKANQEALAVEIFARAEAAS-GNTVQVYNAMMGVYARTGRFTKVQELLDLM 248

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVE--ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           R +G +PD VS++TL+N  +++   V   A+ +  E+       D+ T N +I    +  
Sbjct: 249 RSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRES 308

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             ++A +++  M      P + +YN ++ VYG   +  EA  LF+ ++ K    + VTYN
Sbjct: 309 NLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYN 368

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++  + +    +K   + ++M   G   + +TY+TII ++GK G+ D A  L+  ++ S
Sbjct: 369 SLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS 428

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEA 384
           G   D V Y  +I +  +  ++  A  ++ E+      P     + L    A+AG+  EA
Sbjct: 429 GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEA 488

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
              F     +G   D   +  M+++  R  +    ++++++M    + PD  +  ++L  
Sbjct: 489 EETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRV 548

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV 472
            GK    E    +  +M EE C  + QV
Sbjct: 549 LGKENREEDVHKVVKDM-EELCGMNSQV 575



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 35/416 (8%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            ++D   E+      V  +  V+    + K W+ A  L   +RQ+    DR  ++ LI  +
Sbjct: 733  LIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAY 792

Query: 65   GKEGMFDSAISWLQQMEQDR----------------VSGDL----VLYSNLIELARKLSD 104
               G ++ A +    M +D                 V G L    V+   L ++  K+S 
Sbjct: 793  AASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISK 852

Query: 105  YSKAI---------------SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             S  +                I+  +K++G  P +  Y  MI +  K K  ++   ++ E
Sbjct: 853  SSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSE 912

Query: 150  MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
            M     KPD   ++++L LY     F +   V+  + E     D  T N +I +Y +   
Sbjct: 913  MEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRR 972

Query: 210  AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             ++   L   MR++G++P + +Y +L+  +G+ ++  +A  LF  +  KE + +   Y+ 
Sbjct: 973  PEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI 1032

Query: 270  MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
            M+K++  S  H KA  L+  M+  G+EP   T   ++  +  +G+ + A  +   L+  G
Sbjct: 1033 MMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG 1092

Query: 330  VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
            + +  + Y ++I AY + G    A + L E+++    P     T   RA  + + T
Sbjct: 1093 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHT 1148



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/494 (21%), Positives = 213/494 (43%), Gaps = 47/494 (9%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P ++ YN ++    R      A  LF ++  +G  PD  TY++L+  F +EG  D  
Sbjct: 324 RCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKV 383

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               + M +     D + Y+ +I +  K   +  A  ++S +K SG  PD V Y  +I+ 
Sbjct: 384 KEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDS 443

Query: 134 FGKAKLFKEARLLIEEMR-----------------------------------EQGVKPD 158
            GKA + KEA  ++ EM                                      G+KPD
Sbjct: 444 LGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 503

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            ++YS +L++ +  ++  +A+ ++ EM   +   D     +M+ V G+ +  +D  ++  
Sbjct: 504 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 563

Query: 219 SMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            M ++ G++  V+       +  + E F  A ++ RL   +  E +     +++  YG S
Sbjct: 564 DMEELCGMNSQVIC-----SILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSS 618

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP-VL 336
             H +A  L+  ++      + +    +I +  KA +L  A   + K R  G+      +
Sbjct: 619 GRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTM 678

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y+++++  E   L A A ++  ++R    +P+     + +    + G  E A ++  QA 
Sbjct: 679 YESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAE 738

Query: 393 DAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
           + G +  D+S+   +IE + + K +     +   +R      D  +   ++++Y     +
Sbjct: 739 EKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCY 798

Query: 452 ETADDLYSEMQEEG 465
           E A  +++ M  +G
Sbjct: 799 ERARAIFNTMMRDG 812



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 145/292 (49%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            ++  M+  G  P  + Y  +I    K        + + +ME  R   DL +++++++L  
Sbjct: 874  IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYT 933

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + D+ K   ++  ++ +G+ PD   YNT+I ++ + +  +E   L+ EMR  G++P   
Sbjct: 934  GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 993

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +L++ + +     +A  +F  +    C LD +  +IM+ ++        A++L   M
Sbjct: 994  TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVM 1053

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ G++P++ + + L+  Y  +    EA  +   ++ + +  + + Y+++I  Y K+ +H
Sbjct: 1054 KEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDH 1113

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              A   + EM+  G+EP+   ++  +     +     A +L + LR +G ++
Sbjct: 1114 NVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDL 1165



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/559 (19%), Positives = 225/559 (40%), Gaps = 47/559 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY+V+L  +LR  +   A  L+ EM      PD   Y  ++   GKE   +     
Sbjct: 502  PDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKV 561

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ ME+       V+ S L+    K   +  A ++     S G   D     +++  +G 
Sbjct: 562  VKDMEELCGMNSQVICSILV----KGECFDHAANMLRLAISQGCELDRENLLSILGSYGS 617

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--CPLDL 194
            +    EAR L++ +RE       +    L+ +  + H+  +AL  + +  +    C    
Sbjct: 618  SGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCG-SF 676

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS-------VVSY--------------- 232
            T    ++    + ++  +A ++F  MR  G++PS       VV+Y               
Sbjct: 677  TMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQ 736

Query: 233  --------------NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                            ++  YG+ +L+ +A  L   +++K    +   +N +I  Y  S 
Sbjct: 737  AEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASG 796

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +E+A  +   M   G  P   + + ++      G+LD   ++ Q+L+  G +I      
Sbjct: 797  CYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSIT 856

Query: 339  TMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDA 394
             M+ A+   G +   K++   ++     P        I +LA+  R+ +   +  +   A
Sbjct: 857  LMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVA 916

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                D+S++  +++L++    +    +V++ ++ AG  PD      ++  Y + R  E  
Sbjct: 917  RFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEG 976

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
              L  EM+  G       +  ++S +G  +     E LFE L S      +  +H++  +
Sbjct: 977  LSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKM 1036

Query: 515  YERANRLNDASRIMNRMNK 533
            +  +   + A +++  M +
Sbjct: 1037 FRNSGNHSKAEKLLGVMKE 1055



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 126/290 (43%), Gaps = 15/290 (5%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI-TYSTIIAIWGKAGKLDRAAML 321
           N     T++ + GK+ +   A  +    +      N +  Y+ ++ ++ + G+  +   L
Sbjct: 187 NARMLATILSVLGKANQEALAVEIFARAE--AASGNTVQVYNAMMGVYARTGRFTKVQEL 244

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAH--AKRLLHELR----QPNTIPRETAITIL 375
              +RS G E D V + T+I A  + G +    A  LL+E+R    QP+ I   T I+  
Sbjct: 245 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 304

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           +R   +EEA  V+          D+  +  MI ++ R         +F+ + S G+ PD+
Sbjct: 305 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 364

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                +L ++ +    +   ++  +M + G    +  +  ++ +YG R   ++   L+  
Sbjct: 365 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 424

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM-NKR-----RTFNS 539
           +           + V+     +AN + +A+ +M+ M N R     RTF++
Sbjct: 425 MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSA 474



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 55/111 (49%)

Query: 9    INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
            + +EA   P++   ++++ +   + Q E A  + D ++  G+      YS++I  + K G
Sbjct: 1052 VMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNG 1111

Query: 69   MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
              + AI  L +M++D +  D  +++  +  A      S+AI +   L+ +G
Sbjct: 1112 DHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTG 1162


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 172/327 (52%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN +LR  ++A     A  +  EM + G+ P+  TYS LI  +G    ++SA   
Sbjct: 339 PRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIV 398

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME   V  +  ++S ++   R   ++ K   +   ++ SG+ PD + YN +I+ FGK
Sbjct: 399 LKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGK 458

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A    + M  +G++PDT++++TL++ + +  K   A  +F EM E       TT
Sbjct: 459 FNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTT 518

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIMI+ +G  +   D   L  +MR  G+ P+ V+Y TL+ +YG++  F +AI     M+
Sbjct: 519 FNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMK 578

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +   YN ++  Y +    ++A +    M++ G++P+ +  +++I  +GK  +  
Sbjct: 579 AAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDV 638

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            A ++ Q ++ + ++ D V Y T++ A
Sbjct: 639 EAFVVLQYMKENDLKPDVVTYTTLMKA 665



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 189/410 (46%), Gaps = 39/410 (9%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E A  +F+EMR  G+ P    Y+ L+  + K G+   A   + +ME+             
Sbjct: 323 EEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMER------------- 369

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                 SG++P+   Y+ +I+ +G A+ ++ AR++++EM    V
Sbjct: 370 ----------------------SGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNV 407

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           +P+   +S +L  Y +  ++ +   V  EM +     D    N++ID +G+ +    A  
Sbjct: 408 QPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMA 467

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            F  M   GI+P  +++NTL+  + +A     A  LF  M  K       T+N MI  +G
Sbjct: 468 TFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFG 527

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                +   NL+  M+++G+ PNA+TY+T+I I+GK+G+ D A      ++++G++    
Sbjct: 528 DQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSST 587

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA---GRIEEATWVFRQAF 392
           +Y  ++ AY + GL   A      +R     P   A+  L  A    R +   +V  Q  
Sbjct: 588 MYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYM 647

Query: 393 DAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
              ++K D+  +  +++     +K+  V  V+E+M  +G  PD    A++
Sbjct: 648 KENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAML 697



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 10/440 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI--S 75
           +   YN ++    R    E A  L   MR+ G   D   YS +I    K    +S+I   
Sbjct: 198 TPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQK 257

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             +++++D++  D+ L++++I    K  D  KA+     ++ SG+        T+I   G
Sbjct: 258 IYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLG 317

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                +EA  + EEMR+ G++P T +Y+ LL  YV+     +A  V +EM       +  
Sbjct: 318 NCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQ 377

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T +++ID YG  +  + A  +   M    + P+   ++ +L  Y +   + +   + R M
Sbjct: 378 TYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREM 437

Query: 256 QRKEIEQNVVTYNTMIKIYGK--SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +   +  + + YN +I  +GK   L+H  AT     M + GIEP+ IT++T++    KAG
Sbjct: 438 EDSGVRPDRIFYNVLIDTFGKFNCLDHAMAT--FDRMLSEGIEPDTITWNTLVDCHCKAG 495

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           K DRA  LF+++   G       +  MI ++         K LL  +R     PN +   
Sbjct: 496 KHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYT 555

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I I  ++GR ++A         AG     +++  ++  +++       +  F  MR  
Sbjct: 556 TLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDD 615

Query: 430 GYFPDSHIIALVLNSYGKLR 449
           G  P    +  ++N++GK R
Sbjct: 616 GLKPSLLALNSLINAFGKDR 635



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 150/288 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P+ + ++ +L +     +W+    +  EM   G+ PDR  Y+ LI  FGK    
Sbjct: 403 EASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCL 462

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++   +M  + +  D + ++ L++   K   + +A  +F  +   G +P    +N M
Sbjct: 463 DHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIM 522

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN FG  + + + + L+  MR QG+ P+ V+Y+TL+++Y ++ +F +A+    +M     
Sbjct: 523 INSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGL 582

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
               T  N +++ Y Q  ++  A   FW+MR  G+ PS+++ N+L+  +G+     EA  
Sbjct: 583 KPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFV 642

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + + M+  +++ +VVTY T++K      + +K  ++ +EM   G  P+
Sbjct: 643 VLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPD 690



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 157/317 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y++++     A++WE A  +  EM    + P+ Y +S ++  +  +G +      
Sbjct: 374 PNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQV 433

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME   V  D + Y+ LI+   K +    A++ F R+ S GI PD + +NT+++   K
Sbjct: 434 LREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCK 493

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A  L EEM E+G  P   +++ ++N + +  ++ +  ++   M       +  T
Sbjct: 494 AGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVT 553

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID+YG+     DA      M+  G+ PS   YN LL  Y +  L  +A+  F  M+
Sbjct: 554 YTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMR 613

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +++  N++I  +GK     +A  ++Q M+   ++P+ +TY+T++       K D
Sbjct: 614 DDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFD 673

Query: 317 RAAMLFQKLRSSGVEID 333
           +   +++++  SG   D
Sbjct: 674 KVPSVYEEMILSGCTPD 690



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 199/435 (45%), Gaps = 14/435 (3%)

Query: 63  CFGKEGMFDSAISWLQQMEQ--------DRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           CF  E ++   I  L Q E+         + +   + Y+ LI    + +D  KA+++  R
Sbjct: 165 CFSYELLYSILIHALGQSEKLYEAFLLSQKQNLTPLTYNALISACARNNDIEKALNLICR 224

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARL--LIEEMREQGVKPDTVSYSTLLNLYVEN 172
           ++  G   DLV Y+ +I    K      + L  +  E+    ++ D   ++ ++  + + 
Sbjct: 225 MREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKA 284

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
               +AL     +      +   T   +I   G     ++A+ +F  MR  G+ P   +Y
Sbjct: 285 GDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAY 344

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N LLR Y +A L  +A  +   M+R  +  N  TY+ +I  YG +   E A  +++EM+ 
Sbjct: 345 NALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEA 404

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
             ++PNA  +S I+A +   G+  +   + +++  SGV  D + Y  +I  + +   + H
Sbjct: 405 SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH 464

Query: 353 A----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A     R+L E  +P+TI   T +    +AG+ + A  +F +  + G +   + F  MI 
Sbjct: 465 AMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMIN 524

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F   +++ +V  +   MRS G  P++     +++ YGK   F+ A +   +M+  G   
Sbjct: 525 SFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKP 584

Query: 469 SDQVHFQMLSLYGAR 483
           S  ++  +L+ Y  R
Sbjct: 585 SSTMYNALLNAYAQR 599



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/462 (21%), Positives = 212/462 (45%), Gaps = 12/462 (2%)

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL-VAYNTMINVFG 135
            Q  E  RV    + +S L  L    S    A ++ S L+   +     + Y+ +I+  G
Sbjct: 121 FQLAESYRVVPGPLWHSLLKSLCTSSSSIPLAYAVVSWLQKHNLCFSYELLYSILIHALG 180

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +++   EA LL ++   Q + P  ++Y+ L++    N+   +AL++   M E   P DL 
Sbjct: 181 QSEKLYEAFLLSQK---QNLTP--LTYNALISACARNNDIEKALNLICRMREDGYPSDLV 235

Query: 196 TCNIMIDVYGQLDMAKDA--DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             +++I    + + A  +   +++  + +  ++  V  +N ++  + +A    +A+    
Sbjct: 236 NYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLG 295

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           ++Q   +     T  T+I   G     E+A  + +EM++ G++P    Y+ ++  + KAG
Sbjct: 296 VVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAG 355

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            L  A  +  ++  SGV  +   Y  +I AY        A+ +L E+   N  P     +
Sbjct: 356 LLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFS 415

Query: 374 -ILAR---AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            ILA     G  ++   V R+  D+G   D   +  +I+ F +     + +  F++M S 
Sbjct: 416 RILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSE 475

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  PD+     +++ + K  + + A++L+ EM E+G +  +     M++ +G ++ ++ +
Sbjct: 476 GIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDV 535

Query: 490 ESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++L   + S   +     +  +  IY ++ R +DA   ++ M
Sbjct: 536 KNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDM 577


>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 249/547 (45%), Gaps = 45/547 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQW--ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P + ++N ++   L++      LA  L +E+R+ GI PD  TY+TLI+   +E   + A+
Sbjct: 287 PDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAV 346

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                M   R   DL  Y+ +I +  +     +A  +F  L+S G +PD V YN+++  F
Sbjct: 347 KVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 406

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +     + + + E+M + G   D ++Y+T++++Y +  +   A  ++++M       D 
Sbjct: 407 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 466

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  ++ID  G+ +M K+A  +   M    + P++ +++ L+  Y +A    EA   F  
Sbjct: 467 VTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDC 526

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R  I+ + + Y+ M+ I  +  E  KA  L QEM     +P+   Y  ++ + GK  +
Sbjct: 527 MLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENR 586

Query: 315 -------------------------------LDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                                           D AA + +   S G E+D     +++ +
Sbjct: 587 EEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGS 646

Query: 344 YERVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGE-VK 398
           Y   G    A+ LL  LR+ ++    +  E  I +L +A ++ +A   + +A D G    
Sbjct: 647 YGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCG 706

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
             +++  ++     N+ +A   ++F  MR  G  P  H+   ++ +Y K+   ETA  L 
Sbjct: 707 SFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLI 766

Query: 459 SEMQEEGCVFSD-QVHFQMLSLYGARKDFNMLESLFERLDS-----DSNINKKELH-HVV 511
            + +E+G +F D  +H  ++  YG  K +   ESL   L       D  +    +H +  
Sbjct: 767 DQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAA 826

Query: 512 AGIYERA 518
           +G YERA
Sbjct: 827 SGCYERA 833



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 212/465 (45%), Gaps = 15/465 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+  +   EA    +V  YN ++    R  ++     L D MR RG  PD  +++TLI
Sbjct: 237 ALAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLI 296

Query: 62  TCFGKEGMF--DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
               K G    + AI  L ++ +  +  D++ Y+ LI    + S+  +A+ +++ + +  
Sbjct: 297 NARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHR 356

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PDL  YN MI+V+G+  + +EA  L +++  +G  PD V+Y++LL  +       +  
Sbjct: 357 CQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 416

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  +M ++    D  T N +I +YG+      A +L+  M+  G  P  V+Y  L+   
Sbjct: 417 EICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 476

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+A +  EA  +   M    ++  + T++ +I  Y K+ +  +A      M   GI+P+ 
Sbjct: 477 GKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 536

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS ++ I  +  +  +A  L+Q++     + D  LY+ M+    +        +++ +
Sbjct: 537 LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKD 596

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           + +   +  +   +IL +    + A  + R A   G   D      ++  +  + ++   
Sbjct: 597 MEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEA 656

Query: 420 IEVFEKMR--SAG-----------YFPDSHIIALVLNSYGKLREF 451
            E+ + +R  S+G               +H +   L  YGK R+F
Sbjct: 657 RELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDF 701



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 188/388 (48%), Gaps = 8/388 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           + + ++ +  K +  + A+ IF+R +++     +  YN M+ V+ +   F + + L++ M
Sbjct: 222 MLATILSVLGKANQEALAVEIFARAEAA-XGNTVQVYNAMMGVYARTGRFTKVQELLDLM 280

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVE--ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           R +G +PD VS++TL+N  +++   V   A+ +  E+       D+ T N +I    +  
Sbjct: 281 RSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRES 340

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             ++A +++  M      P + +YN ++ VYG   +  EA  LF+ ++ K    + VTYN
Sbjct: 341 NLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYN 400

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++  + +    +K   + ++M   G   + +TY+TII ++GK G+ D A  L+  ++ S
Sbjct: 401 SLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS 460

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEA 384
           G   D V Y  +I +  +  ++  A  ++ E+      P     + L    A+AG+  EA
Sbjct: 461 GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEA 520

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
              F     +G   D   +  M+++  R  +    ++++++M    + PD  +  ++L  
Sbjct: 521 EETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRV 580

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQV 472
            GK    E    +  +M EE C  + QV
Sbjct: 581 LGKENREEDVHKVVKDM-EELCGMNSQV 607



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 35/416 (8%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            ++D   E+      V  +  V+    + K W+ A  L   +RQ+    DR  ++ LI  +
Sbjct: 765  LIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAY 824

Query: 65   GKEGMFDSAISWLQQMEQDR----------------VSGDL----VLYSNLIELARKLSD 104
               G ++ A +    M +D                 V G L    V+   L ++  K+S 
Sbjct: 825  AASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISK 884

Query: 105  YSKAI---------------SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             S  +                I+  +K++G  P +  Y  MI +  K K  ++   ++ E
Sbjct: 885  SSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSE 944

Query: 150  MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
            M     KPD   ++++L LY     F +   V+  + E     D  T N +I +Y +   
Sbjct: 945  MEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRR 1004

Query: 210  AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             ++   L   MR++G++P + +Y +L+  +G+ ++  +A  LF  +  KE + +   Y+ 
Sbjct: 1005 PEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI 1064

Query: 270  MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
            M+K++  S  H KA  L+  M+  G+EP   T   ++  +  +G+ + A  +   L+  G
Sbjct: 1065 MMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG 1124

Query: 330  VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
            + +  + Y ++I AY + G    A + L E+++    P     T   RA  + + T
Sbjct: 1125 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHT 1180



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/494 (21%), Positives = 213/494 (43%), Gaps = 47/494 (9%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P ++ YN ++    R      A  LF ++  +G  PD  TY++L+  F +EG  D  
Sbjct: 356 RCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKV 415

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               + M +     D + Y+ +I +  K   +  A  ++S +K SG  PD V Y  +I+ 
Sbjct: 416 KEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDS 475

Query: 134 FGKAKLFKEARLLIEEMR-----------------------------------EQGVKPD 158
            GKA + KEA  ++ EM                                      G+KPD
Sbjct: 476 LGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 535

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            ++YS +L++ +  ++  +A+ ++ EM   +   D     +M+ V G+ +  +D  ++  
Sbjct: 536 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 595

Query: 219 SMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
            M ++ G++  V+       +  + E F  A ++ RL   +  E +     +++  YG S
Sbjct: 596 DMEELCGMNSQVIC-----SILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSS 650

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP-VL 336
             H +A  L+  ++      + +    +I +  KA +L  A   + K R  G+      +
Sbjct: 651 GRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTM 710

Query: 337 YQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y+++++  E   L A A ++  ++R    +P+     + +    + G  E A ++  QA 
Sbjct: 711 YESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAE 770

Query: 393 DAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
           + G +  D+S+   +IE + + K +     +   +R      D  +   ++++Y     +
Sbjct: 771 EKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCY 830

Query: 452 ETADDLYSEMQEEG 465
           E A  +++ M  +G
Sbjct: 831 ERARAIFNTMMRDG 844



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 144/292 (49%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            ++  M+  G  P  + Y  +I    K        + + +ME      DL +++++++L  
Sbjct: 906  IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYT 965

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + D+ K   ++  ++ +G+ PD   YNT+I ++ + +  +E   L+ EMR  G++P   
Sbjct: 966  GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 1025

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +L++ + +     +A  +F  +    C LD +  +IM+ ++        A++L   M
Sbjct: 1026 TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVM 1085

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ G++P++ + + L+  Y  +    EA  +   ++ + +  + + Y+++I  Y K+ +H
Sbjct: 1086 KEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDH 1145

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
              A   + EM+  G+EP+   ++  +     +     A +L + LR +G ++
Sbjct: 1146 NVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDL 1197



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/559 (19%), Positives = 225/559 (40%), Gaps = 47/559 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY+V+L  +LR  +   A  L+ EM      PD   Y  ++   GKE   +     
Sbjct: 534  PDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKV 593

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++ ME+       V+ S L+    K   +  A ++     S G   D     +++  +G 
Sbjct: 594  VKDMEELCGMNSQVICSILV----KGECFDHAANMLRLAISQGCELDRENLLSILGSYGS 649

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN--CPLDL 194
            +    EAR L++ +RE       +    L+ +  + H+  +AL  + +  +    C    
Sbjct: 650  SGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCG-SF 708

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS-------VVSY--------------- 232
            T    ++    + ++  +A ++F  MR  G++PS       VV+Y               
Sbjct: 709  TMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQ 768

Query: 233  --------------NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                            ++  YG+ +L+ +A  L   +++K    +   +N +I  Y  S 
Sbjct: 769  AEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASG 828

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +E+A  +   M   G  P   + + ++      G+LD   ++ Q+L+  G +I      
Sbjct: 829  CYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSIT 888

Query: 339  TMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDA 394
             M+ A+   G +   K++   ++     P        I +LA+  R+ +   +  +   A
Sbjct: 889  LMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVA 948

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
                D+S++  +++L++    +    +V++ ++ AG  PD      ++  Y + R  E  
Sbjct: 949  XFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEG 1008

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
              L  EM+  G       +  ++S +G  +     E LFE L S      +  +H++  +
Sbjct: 1009 LSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKM 1068

Query: 515  YERANRLNDASRIMNRMNK 533
            +  +   + A +++  M +
Sbjct: 1069 FRNSGNHSKAEKLLGVMKE 1087



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 6/236 (2%)

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH--AKRLLHE 359
           Y+ ++ ++ + G+  +   L   +RS G E D V + T+I A  + G +    A  LL+E
Sbjct: 257 YNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNE 316

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +R    QP+ I   T I+  +R   +EEA  V+          D+  +  MI ++ R   
Sbjct: 317 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 376

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
                 +F+ + S G+ PD+     +L ++ +    +   ++  +M + G    +  +  
Sbjct: 377 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 436

Query: 476 MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           ++ +YG R   ++   L+  +           + V+     +AN + +A+ +M+ M
Sbjct: 437 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM 492



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 55/111 (49%)

Query: 9    INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
            + +EA   P++   ++++ +   + Q E A  + D ++  G+      YS++I  + K G
Sbjct: 1084 VMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNG 1143

Query: 69   MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
              + AI  L +M++D +  D  +++  +  A      S+AI +   L+ +G
Sbjct: 1144 DHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTG 1194


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 226/504 (44%), Gaps = 40/504 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN+++ ++ R  +   AH L   M  +G  PD  +Y+T+I  +   G     +  +++M
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +   +  +L  YS++I L  K     +   +   +   G+ PD V Y T+I+ F K    
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           + A  L  EM  + + PD++++S L+     + K VEA                      
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEA---------------------- 269

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
                        D+LF  M K G +P  V+Y  L+  Y +     +A  L   M +  +
Sbjct: 270 -------------DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             NVVTY  +     KS E + A  L+ EM  +G++ N  TY+TI+    KAG + +A  
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
           L ++++ +G+  D + Y T++ AY + G +  A+ LL E+     QP  +     +  L 
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            +G++E+   + +   + G + + + +  +++ +          E++  M + G  PDS+
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              +++  + K R  + A  L+ EM E+    +   +  ++  +  RK       LFE +
Sbjct: 497 TYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556

Query: 497 DSDSNINKKELHHVVAGI-YERAN 519
             +  +   E++++   + YE  N
Sbjct: 557 RREGLVASAEIYNLFVDMNYEEGN 580



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 214/452 (47%), Gaps = 4/452 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y  ++       + +    L  EM+ +G+ P+ YTYS++I    K G        
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M +  V  D V+Y+ LI+   KL +   A  +FS +++  IVPD +A++ +I     
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    EA  L  EM ++G +PD V+Y+ L++ Y +  +  +A  +  +M ++    ++ T
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              + D   +      A+ L   M + G+  ++ +YNT++    +A    +A+ L   M+
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  + +TY T++  Y K+ E  KA  L++EM +RG++P  +T++ ++     +GKL+
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
               L + +   G+  +   Y +++  Y     +  +  +   +     +P      IL 
Sbjct: 443 DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A  ++EA ++ ++  +       S +  +I+ F + KK     ++FE+MR  G  
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLV 562

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
             + I  L ++   +    ET  +L  E  E+
Sbjct: 563 ASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 150/327 (45%), Gaps = 35/327 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y  ++    +  + + A  L ++M Q G+ P+  TY+ L     K G  D+A 
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M +  +  ++  Y+ ++    K  +  +A+ +   +K +G+ PD + Y T+++ +
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +AR L+ EM ++G++P  V+++ L+N                           
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMN--------------------------- 433

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                 + + G+L+   D +RL   M + GI P+  +YN++++ Y        +  ++R 
Sbjct: 434 -----GLCMSGKLE---DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + +  +  TYN +IK + K+   ++A  L +EM  +     A +Y+ +I  + K  K
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           L  A  LF+++R  G+     +Y   +
Sbjct: 546 LLEARQLFEEMRREGLVASAEIYNLFV 572



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 125/258 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y  +   + ++ + + A+ L  EM ++G+  +  TY+T++    K G    A+ 
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M++  +  D + Y+ L++   K  +  KA  +   +   G+ P +V +N ++N   
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +   ++   L++ M E+G+ P+  +Y++++  Y   +    +  ++  M       D  
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+I  + +    K+A  L   M +   + +  SYN L++ + + +   EA  LF  M
Sbjct: 497 TYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556

Query: 256 QRKEIEQNVVTYNTMIKI 273
           +R+ +  +   YN  + +
Sbjct: 557 RREGLVASAEIYNLFVDM 574



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P    Y  ++    +  +   A  L  EM  RG+ P   T++ L+      G  
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +     L+ M +  +  +   Y+++++     ++   +  I+  + + G+VPD   YN +
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNIL 501

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           I    KA+  KEA  L +EM E+       SY+ L+  + +  K +EA  +F EM
Sbjct: 502 IKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 220/478 (46%), Gaps = 30/478 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F YN ++  + +  + E    +  EM   G+ PD+Y+Y+TLI  + +EG    A    
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M ++ ++   + Y+ L++    L     A+ ++  +   G+ P+ ++ +T+++   KA
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              ++A  L +E   +G+  + ++++T++N   +  +  EA  +   M E+ CP D  T 
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             + D Y +L     A  L   M  +G  PSV  +N+ +  +  A+ + +   +   M  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  N+VTY  +I  + K     +A NL  EM N G+ PN    S +++ + K GK+D 
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 318 AAMLFQKLRS---------SGVEIDP-----------------VLYQTMIVAYERVGLVA 351
           A ++ QKL +         S +EID                  V++  +I    + G +A
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            AK L   LR     P+     + I   A +G I+EA  +      AG   +I  +  +I
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               ++ K +  + +F K++S G  P+      +++ Y K  +   A  L  +M EEG
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 220/454 (48%), Gaps = 5/454 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N +L  ++++    +A  ++ +MR  G+ PD +T + +   + ++G    A+ +
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   +  +LV Y  +++    +     A  I   L+  G+ P++V Y  ++  + K
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +EA  +++EM+E G +  D V+Y  ++N Y +  +  +A  V  EM +    ++L 
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N MI+   +L   ++  ++   M  +G+ P   SYNTL+  Y       +A  + R+M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R  +    +TYNT++K +      + A  L   M  RG+ PN I+ ST++    KAGK 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           ++A  L+++  + G+  + + + T+I    ++G +A A+ LL  +++    P+++   T 
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + G++  AT +  +    G    + +F   I      K++  V ++  +M + G 
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+      ++  + K      A +LY EM   G
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 192/436 (44%), Gaps = 16/436 (3%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W    AR  + +V  +N V+  + +  +   A  L D M++    PD  TY TL   + K
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK 546

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            G   +A   + +ME    +  + ++++ I        + K   I S + + G+ P+LV 
Sbjct: 547 LGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVT 606

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y  +I  + K     EA  L  EM   G+ P+    S L++ + +  K  EA  V  ++ 
Sbjct: 607 YGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV 666

Query: 187 EVNCPLDLTTCNIMID-VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            ++     +   I ID +   +D   D +             + V +N ++    ++   
Sbjct: 667 NIDMIPGCSISTIEIDKISHVVDTIADGNP----------HSANVMWNVIIFGLCKSGRI 716

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +A  LF  ++ K    +  TY+++I     S   ++A +L   M + G+ PN ITY+++
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSL 776

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR 361
           I    K+GKL RA  LF KL+S G+  + + Y T+I  Y + G    A    ++++ E  
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGI 836

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           QP  I     I  L   G +EEA  +  Q  +     +   +  +I  + ++     + +
Sbjct: 837 QPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 896

Query: 422 VFEKMRSAGYFPDSHI 437
           ++++M   G  P + I
Sbjct: 897 LYDEMHIRGLLPTNWI 912



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 201/460 (43%), Gaps = 27/460 (5%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP------ 157
           D   A+ +F RL  S   P LV++  ++++  +A+ F +AR L+  +     +P      
Sbjct: 83  DPDAALHLF-RLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPH-AEPLFPHLA 138

Query: 158 --------DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
                     VS+  LL  + +  +   AL+VF  M +V C   L +CN +++   Q   
Sbjct: 139 EVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGD 198

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
              A  ++  MR  G+ P   +   + + Y       +A+     M+   +E N+V Y+ 
Sbjct: 199 PGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  Y      E A  +++ +Q +G+ PN +TY+ ++  + K G+++ A  + ++++ +G
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318

Query: 330 -VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEA 384
            + +D V Y  MI  Y + G +  A R+ +E+R      N     T I  L + GR+EE 
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             V ++  D G   D   +  +I+ + R        E+   M   G    +     +L  
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERLDSDSNI 502
           +  L   + A  L+  M + G V  +++    L   L+ A K    L    E L      
Sbjct: 439 FCSLHAIDDALRLWFLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
           N    + V+ G+  +  R+ +A  +++RM + R    SL 
Sbjct: 498 NVITFNTVINGLC-KIGRMAEAEELLDRMKELRCPPDSLT 536



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/467 (20%), Positives = 203/467 (43%), Gaps = 18/467 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-------------RGIAPDRYTYSTLITC 63
           PS+ ++  +L  + RA+++  A  L   +               R       ++  L+  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
               G   SA++    M +      L   + L+    +  D   A  ++ +++ +G++PD
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
                 M   + +     +A   +EEM   G++ + V+Y  +++ Y       +A  +  
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEA 242
            +       ++ T  +++  Y +    ++A+R+   M++ G I    V+Y  ++  Y + 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               +A  +   M+   I  N+  YNTMI    K    E+   ++QEM++ G+ P+  +Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LH 358
           +T+I  + + G + +A  + + +  +G+    + Y T++  +  +  +  A RL    L 
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               PN I   T +  L +AG+ E+A  ++++    G  K++  F  +I    +  + A 
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             E+ ++M+     PDS     + + Y KL +  TA  L ++M+  G
Sbjct: 518 AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 117/224 (52%), Gaps = 1/224 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ++D I +   +S +V  +NV++  + ++ +   A  LF+ +R +   PD +TYS+LI   
Sbjct: 687 VVDTIADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G  D A S    M    ++ +++ Y++LI    K    S+A+++F++L+S GI P+ 
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT+I+ + K     EA  L ++M E+G++P  ++YS L+          EA+ +  +
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQ 865

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           M E N   +  T   +I  Y +    ++  +L+  M   G+ P+
Sbjct: 866 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 221/469 (47%), Gaps = 12/469 (2%)

Query: 6   LDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           ++++N   +Y  SP    YN +L  + +  +   A  L  +M+ RG+ P+R TY+ L+  
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           + K G    A + ++ M Q+ +  D+  Y+ LI          +A  +   +++  ++PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V+YNT+IN   +     EA  L+EEM E+GVKP+ V+++ ++  Y +  K  +A +   
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M E     D  T N +I+ Y +     +A R    M +  +    V+ NT+LR     +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  L    +++    + V+Y T+I  Y K    ++A  L  EM+ + I P+ +TY+
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            II    + GK ++A     +L  SG+  D   Y T++  Y R G V  A +  +++ + 
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           +  P      IL R     G +E+A  +F      G+  D   +  +I    +  +  + 
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 420 IEVFEKMRSAGYFPDSHI---IALVLNSYGKLREFETADDLYSEMQEEG 465
             +  +M      PD +    I   L   G++RE   A++  S+M E+G
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIRE---AEEFMSKMLEKG 693



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 206/452 (45%), Gaps = 4/452 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +N+V+       +++ A    + M +   +PD  TY+T++    K+G    A   
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M+   +  +   Y+ L+    K+    +A ++   +  + ++PD+  YN +IN    
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L +EM    + PD VSY+TL+N  +E  K  EA  +  EM+E     +  T
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIM+  Y +     DA      M + G  P  V+YNTL+  Y +A   GEA      M 
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK ++ + VT NT+++   +  + E+A  L+   + RG   + ++Y T+I  + K G +D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-TIL 375
           RA  L+ +++   +    V Y  +I    + G    A   L+EL +   +P ET   TIL
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R G +E+A     +  +     D+     ++            +++F    S G  
Sbjct: 566 HGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKA 625

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            D+     ++ S  K    + A +L SEM+E+
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 214/461 (46%), Gaps = 11/461 (2%)

Query: 14  RYSPSVFAYNVVLRNVLR---AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           R  P++   N +L +++R   +     +   F++  + GI P+  T++ +I  +  E  F
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF 224

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +L  M +   S D V Y+ +++   K      A  +   +KS G++P+   YN +
Sbjct: 225 KDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  + K    KEA  +IE M +  + PD  +Y+ L+N      +  EA  +  EM  +  
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 191 PLDLTTCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
             D+ + N +I+  G L+ +K  +A +L   M + G+ P+ V++N +++ Y +     +A
Sbjct: 345 LPDVVSYNTLIN--GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +    M+      + VTYNT+I  Y K+    +A   M EM  + ++ +++T +TI+  
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             +  KL+ A  L    R  G  ID V Y T+IV Y + G V  A +L  E+++    P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T+     I  L + G+ E+A     +  ++G + D + +  ++  + R        +   
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           KM    + PD     ++L         E A  L++    +G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 4/361 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  +  P V +YN ++   L   +   A  L +EM ++G+ P+  T++ ++  + KEG  
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A + + +ME+   S D V Y+ LI    K  +  +A      +    +  D V  NT+
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +    + K  +EA  L+   R++G   D VSY TL+  Y ++     AL ++ EM E   
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T N +I    Q    + A      + + G+ P   +YNT+L  Y       +A  
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAI 308
               M     + +V T N +++  G  +E   EKA  L     ++G   + +TY+T+I  
Sbjct: 580 FHNKMVENSFKPDVFTCNILLR--GLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             K G+LD A  L  ++    +  D   Y  +I A    G +  A+  + ++ +   +P 
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697

Query: 369 E 369
           +
Sbjct: 698 Q 698



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 185/420 (44%), Gaps = 42/420 (10%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINV---FGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           A  IF ++K   + P+L+  NT++N    +  +     +R    +  + G+ P+  +++ 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           ++  Y   +KF +A+     M + NC  D  T N ++D   +     DA  L   M+  G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ---------------------------- 256
           + P+  +YN L+  Y +     EA ++  LM                             
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 257 --RKEIEQ-----NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             R E+E      +VV+YNT+I    +  +  +A  L++EM  +G++PNA+T++ ++  +
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----T 365
            K GK+D A+    K+  SG   D V Y T+I  Y + G +  A R + E+ + N    +
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T +  L R  ++EEA  +   A   G   D   +G +I  + ++      ++++++
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M+     P +     ++    +  + E A    +E+ E G +  +  +  +L  Y    D
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 156/376 (41%), Gaps = 32/376 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE+ +SP    YN ++    +A     A    DEM ++ +  D  T +T++    +E   
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   L    +     D V Y  LI    K  +  +A+ ++  +K   I+P  V YN +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    +    ++A   + E+ E G+ PD  +Y+T+L+ Y       +A     +M E + 
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLF--WSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
             D+ TCNI++       M + A +LF  W  +   ID   V+YNTL+    +     +A
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAID--TVTYNTLITSLCKEGRLDDA 647

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP----------- 297
            +L   M+ KE+  +  TYN +I     S    +A   M +M  +G  P           
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNET 707

Query: 298 ------------NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
                       +++ YS  I      GK   A  +F + +  G+ +D   Y  ++    
Sbjct: 708 VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM---- 763

Query: 346 RVGLVAHAKRLLHELR 361
             GL+   K +  E R
Sbjct: 764 -DGLIKRRKSISKEAR 778



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 11/312 (3%)

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV---YGQLDMAKDA 213
           P      T +  YV++ +   A  +F +M  +    +L TCN +++    Y        +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
              F    K+GI P+V ++N ++  Y     F +A+    +M +     + VTYNT++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             K      A +L+ +M++RG+ PN  TY+ ++  + K G L  AA + + +  + +  D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
              Y  +I      G +  A +L  E+      P+ +   T I       +I EA  +  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL- 448
           +  + G   +      M++ + +  K  +      KM  +G+ PD      ++N Y K  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 449 ---REFETADDL 457
                F T D++
Sbjct: 433 NMGEAFRTMDEM 444



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 52/358 (14%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM---------------- 270
           PS    +T +  Y ++     A  +F+ M+R  +  N++T NT+                
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 271 --------------------IKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAI 308
                               I IYG  LE+  + A   +  M      P+ +TY+TI+  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             K G+L  A  L   ++S G+  +   Y  ++  Y ++G +  A  ++  + Q N +P 
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 369 ----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                  I  L   GRIEEA  +  +  +   + D+  +  +I       K +   ++ E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLSLYGAR 483
           +M   G  P++    +++  Y K  + + A +  ++M+E G  FS D V +  L + G  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG--FSPDCVTYNTL-INGYC 429

Query: 484 KDFNMLESLFERLDSDSNINKK----ELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           K  NM E+ F  +D     N K     L+ ++  +  R  +L +A ++++   KR  F
Sbjct: 430 KAGNMGEA-FRTMDEMGRKNMKMDSVTLNTILRTLC-REKKLEEAYKLLSSARKRGYF 485


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 221/483 (45%), Gaps = 8/483 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I D I       P+   ++ +L+ + +AK    A  +F +++ R   P    Y+TLI   
Sbjct: 147 IQDMIRSPCSVGPA--EWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILML 204

Query: 65  GKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             EG  +       ++  +   S D + YS LI    KL  Y  A  +F  +K +G+ P 
Sbjct: 205 MHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPT 264

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
              Y T++ ++ K    + A  L+EEM+ +G  P   +Y+ L+    +  +  +A S+F 
Sbjct: 265 EKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFF 324

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M +  C  D+   N +I++ G+    +DA +LF  M  +   P+VV+YNT+++   E++
Sbjct: 325 NMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESK 384

Query: 244 L-FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA   F  M+   I  +  TY  +I  + K+   EKA  L++EM  +G  P    Y
Sbjct: 385 APASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAY 444

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            ++I   G+A + + A  LFQ+L+ +       +Y  MI  +   G ++ A  L  E  +
Sbjct: 445 CSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEK 504

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               P+       ++ + RAG I+EA  + R   + G   DI     ++   ++      
Sbjct: 505 LGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKR 564

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            IE+F KM+ +   PD+     +L+   +   FE A  L  EM+ +G  +    +  +L 
Sbjct: 565 AIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILE 624

Query: 479 LYG 481
             G
Sbjct: 625 AVG 627



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 171/367 (46%), Gaps = 36/367 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  +L    +  + E A  L +EM+ +G AP  +TY+ LI   GK G  D A S 
Sbjct: 263 PTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSL 322

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN-VFG 135
              M +D    D+VL +NLI +  +      A+ +F ++ S    P++V YNT+I  +F 
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN---CPL 192
                 EA L  E+M+  G+ P + +Y+ L++ + + ++  +AL +  EM+E     CP 
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442

Query: 193 DLTT------------------------CN--------IMIDVYGQLDMAKDADRLFWSM 220
              +                        C         +MI  +G      DA  LF   
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEX 502

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K+G  P V +YN L+     A +  EA  L R M+      ++ ++N ++    K+   
Sbjct: 503 EKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A  +  +M+   I P+A++Y+TI++   +AG  + AA L ++++  G E D + Y ++
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 341 IVAYERV 347
           + A  +V
Sbjct: 623 LEAVGKV 629



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 186/429 (43%), Gaps = 16/429 (3%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           SD  KAI +        +V  ++  +  + +  K + FK A       + Q  + D+ +Y
Sbjct: 76  SDAEKAIEVLKLKVDHRLVHQVLDID--VEIRAKIQFFKWAG------KRQHFQHDSTTY 127

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
             L+    E+    E      +M    C +     + ++ + G+  M   A  +F+ ++ 
Sbjct: 128 MALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKG 187

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLF--RLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              +P+   YNTL+ +    E   E IH     +        + +TY+ +I  +GK   +
Sbjct: 188 RKCNPTATVYNTLILMLMH-EGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  L  EM+  G+ P    Y+TI+A++ K  K++ A  L ++++  G       Y  +
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    +VG V  A  L    L +  +P+ +     I IL RAGR+E+A  +F +      
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366

Query: 397 VKDISVFGCMIELFSRNKKYANVIEV-FEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
             ++  +  +I+    +K  A+   + FEKM++ G  P S   A++++ + K    E A 
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
            L  EM E+G       +  ++   G  K +     LF+ L  +   +   ++ V+   +
Sbjct: 427 LLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHF 486

Query: 516 ERANRLNDA 524
               RL+DA
Sbjct: 487 GNCGRLSDA 495



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 35/261 (13%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS F Y +++    +  + E A  L +EM ++G  P    Y +LI   G+   +++A  
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANE 462

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q+++++       +Y+ +I+        S A+ +F   +  G  PD+  YN +++   
Sbjct: 463 LFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMI 522

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A +  EA  L+  MRE G  PD  S++ +LN   +      A+ +F +M E        
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE------ 576

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                                        I P  VSYNT+L     A +F  A  L R M
Sbjct: 577 -----------------------------IMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607

Query: 256 QRKEIEQNVVTYNTMIKIYGK 276
           + K  E + +TY+++++  GK
Sbjct: 608 KLKGFEYDSITYSSILEAVGK 628



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +L+ ++E+  + P   AY  ++ ++ RAK++E A+ LF E+++         Y+ +
Sbjct: 424 KALLLLEEMDEKG-FPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVM 482

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  FG  G    A+    + E+   S D+  Y+ L+    +     +A S+   ++ +G 
Sbjct: 483 IKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGC 542

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+ ++N ++N   K    K A  +  +M+E  + PD VSY+T+L+       F  A  
Sbjct: 543 TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAK 602

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +  EM       D  T + +++  G++D
Sbjct: 603 LMREMKLKGFEYDSITYSSILEAVGKVD 630



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 52/89 (58%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P + ++N++L  + +    + A  +F +M++  I PD  +Y+T+++C  + GMF+ A  
Sbjct: 543 TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAK 602

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSD 104
            +++M+      D + YS+++E   K+ +
Sbjct: 603 LMREMKLKGFEYDSITYSSILEAVGKVDE 631


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 221/462 (47%), Gaps = 6/462 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +P++  YNV+++   + K++E A G  D M + G  PD ++YST+I    K G  
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR-LKSSGIVPDLVAYNT 129
           D A+    +M +  V+ D+  Y+ LI+   K  D+  A+ ++ R L+ S + P++  +N 
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI+   K     +   + E M++   + D  +YS+L++   +     +A SVF E++E  
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             +D+ T N M+  + +    K++  L W + +     ++VSYN L++   E     EA 
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            ++RLM  K    +  TY   I     +    KA  +MQE+++ G   +   Y++II   
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
            K  +L+ A+ L +++   GVE++  +   +I    R   +  A   L E+ +    P  
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I  L +AG+  EA+   ++  + G   D+  +  ++    R++K    +E++ +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
              +G   D  +  ++++    + + + A  + + M+   C 
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 38/475 (8%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           + A+ D       Y+ S   Y+ +LR +   +       + + +R +    D     ++I
Sbjct: 26  AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85

Query: 62  TCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             +GK  M D A+   ++M E       +  Y+ L+    +   + K  S+F+  +++G+
Sbjct: 86  KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+L  YN +I +  K K F++AR  ++ M ++G KPD  SYST++N   +  K  +AL 
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM+E     D+T  NI+ID +      K+ D                 + T + ++ 
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGF-----LKEKD-----------------HKTAMELWD 243

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                       RL++   +  NV T+N MI    K    +    + + M+    E +  
Sbjct: 244 ------------RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLL 357
           TYS++I     AG +D+A  +F +L      ID V Y TM+  + R G +  +    R++
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                 N +     I  L   G+I+EAT ++R     G   D + +G  I     N    
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
             + V +++ S+G   D +  A +++   K +  E A +L  EM + G   +  V
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 208/508 (40%), Gaps = 77/508 (15%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++   LDW+ +E  + P VF+Y+ V+ ++ +A + + A  LFDEM +RG+APD   Y+ L
Sbjct: 167 KARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225

Query: 61  ITCFGKE------------------------------------GMFDSAISWLQQMEQDR 84
           I  F KE                                    G  D  +   ++M+Q+ 
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
              DL  YS+LI       +  KA S+F+ L       D+V YNTM+  F +    KE+ 
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES- 344

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI--- 201
           L +  + E     + VSY+ L+   +EN K  EA  ++  M       D TT  I I   
Sbjct: 345 LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404

Query: 202 -----------------------DVYGQLDMA---------KDADRLFWSMRKMGIDPSV 229
                                  DVY    +          ++A  L   M K G++ + 
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
              N L+         GEA    R M +      VV+YN +I    K+ +  +A+  ++E
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   G +P+  TYS ++    +  K+D A  L+ +   SG+E D +++  +I     VG 
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584

Query: 350 VAHAKRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +  A  ++    H     N +   T +    + G    AT ++   +  G   DI  +  
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFP 433
           +++     +  +  +E F+  R+ G FP
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFP 672



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 209/491 (42%), Gaps = 80/491 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ +YN +L   + AKQW     LF      G+AP+  TY+ LI               
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI--------------- 156

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                               +++ K  ++ KA      +   G  PD+ +Y+T+IN   K
Sbjct: 157 --------------------KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV--ENHK--------FVEALSVFAEMN 186
           A    +A  L +EM E+GV PD   Y+ L++ ++  ++HK         +E  SV+  + 
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256

Query: 187 EVNCPLD-LTTCNIMID-----------------------VYGQLDMAK--DADRLFWSM 220
             N  +  L+ C  + D                       ++G  D      A+ +F  +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316

Query: 221 --RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
             RK  ID  VV+YNT+L  +       E++ L+R+M+ K    N+V+YN +IK   ++ 
Sbjct: 317 DERKASID--VVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENG 373

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++AT + + M  +G   +  TY   I      G +++A  + Q++ SSG  +D   Y 
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433

Query: 339 TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I    +   +  A  L+ E+ +     N+      I  L R  R+ EA++  R+    
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    +  +  +I    +  K+       ++M   G+ PD    +++L    + R+ + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553

Query: 455 DDLYSEMQEEG 465
            +L+ +  + G
Sbjct: 554 LELWHQFLQSG 564



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 168/395 (42%), Gaps = 36/395 (9%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ Y+ ++  +  A   + A  +F+E+ +R  + D  TY+T++  F + G    ++   +
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            ME  + S ++V Y+ LI+   +     +A  I+  + + G   D   Y   I+      
Sbjct: 350 IMEH-KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              +A  +++E+   G   D  +Y+++++   +  +  EA ++  EM++    L+   CN
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA---------- 248
            +I    +     +A      M K G  P+VVSYN L+    +A  FGEA          
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528

Query: 249 -------------------------IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
                                    + L+    +  +E +V+ +N +I       + + A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             +M  M++R    N +TY+T++  + K G  +RA +++  +   G++ D + Y T++  
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
                 V++A     + R     P      IL RA
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 35/334 (10%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   E + S ++ +YN++++ +L   + + A  ++  M  +G A D+ TY   I      
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-------------LARKLSDYSKAI----- 109
           G  + A+  +Q++E      D+  Y+++I+             L +++S +   +     
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467

Query: 110 ----------------SIFSR-LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
                           S F R +  +G  P +V+YN +I    KA  F EA   ++EM E
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            G KPD  +YS LL     + K   AL ++ +  +     D+   NI+I     +    D
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A  +  +M       ++V+YNTL+  + +      A  ++  M +  ++ ++++YNT++K
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
                     A     + +N GI P   T++ ++
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 79/159 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P +  Y+++L  + R ++ +LA  L+ +  Q G+  D   ++ LI      G  D
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ +  ME    + +LV Y+ L+E   K+ D ++A  I+  +   G+ PD+++YNT++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
                 +    A    ++ R  G+ P   +++ L+   V
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 226/489 (46%), Gaps = 21/489 (4%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W++ E R SP   A   +L  ++R ++++     +  M  RG+ PD + YS L  C  K+
Sbjct: 187 WVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQ 246

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G        L +M    V  ++ +Y+  I    + +   +A  +F  +K  G+VP+L  Y
Sbjct: 247 GFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTY 306

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           + MI+ + K    ++A  L +E+    + P+ V + TL++ + +  + V A S+F  M +
Sbjct: 307 SAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVK 366

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                +L   N +I  +GQ       +A  L   M  + + P V +Y  L+      E  
Sbjct: 367 FGVDPNLYVYNCLI--HGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERL 424

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA  LF+ M+ + I  + VTYN++I  + K    EKA +L  EM + G+EPN IT+ST+
Sbjct: 425 AEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTL 484

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I  + K   +  A  L+ ++   G+  D V Y T+I A+ +   +  A RL  ++ +   
Sbjct: 485 IDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGI 544

Query: 366 IPRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISV--------FGCMIELFSRN 413
            P +     L     + GR+ +A   + +   A   K I          F C+IE   +N
Sbjct: 545 HPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQN 604

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD--LYSEMQEEGCVFSDQ 471
                    F  M+S G  PD  I + V      LRE    D   L+ +M + G + +  
Sbjct: 605 GYILRASRFFSDMKSGGVTPD--IWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLM 662

Query: 472 VHFQMLSLY 480
           V+ Q+L+++
Sbjct: 663 VN-QLLAMF 670



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 142/313 (45%), Gaps = 8/313 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+++ YN ++    ++     A GL  EM    ++PD +TY+ LI     E     A   
Sbjct: 371 PNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRL 430

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M+ +R+    V Y++LI    K  +  KA+ + S + SSG+ P+++ ++T+I+ + K
Sbjct: 431 FQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +  K A  L  EM  +G+ PD V+Y+TL++ + +     EAL ++++M E     +  T
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV--------SYNTLLRVYGEAELFGEA 248
              ++D + +     DA   +    +     S+V         +  L+    +      A
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRA 610

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
              F  M+   +  ++ +Y +M+K + +         L  +M   GI PN +    +   
Sbjct: 611 SRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMF 670

Query: 309 WGKAGKLDRAAML 321
           + + G L  A  L
Sbjct: 671 YQENGYLRSACFL 683


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 187/392 (47%), Gaps = 5/392 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+++ I      +P++  YN +L  + +  + E A  L  ++   G  PD  TY++LI
Sbjct: 53  AVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 111

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GK+     A    ++M    ++ D V Y+ LI    +     +A S++  + S G V
Sbjct: 112 DGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 171

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V  +TMI+   KA     A  + + M  +G+ P+ V YS L++   +  K   AL +
Sbjct: 172 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 231

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            A+M +  C  D  T NI+ID   +      A   F  M + G  P V +YN L+  + +
Sbjct: 232 LAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCK 291

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A  +F  M       NVVTY T+I    K  +  KA+   Q M+ RG  P++  
Sbjct: 292 AGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFV 351

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS+++    K+GKL+   MLF ++  SGV  +      +I    +   V  A  L + +R
Sbjct: 352 YSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR 410

Query: 362 Q---PNTIPRETAITILARAGRIEEATWVFRQ 390
           +   P+     + I+ L ++G++ E   V+++
Sbjct: 411 KEGMPHPYAYNSIISALIKSGKVNEGQAVYQE 442



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 208/448 (46%), Gaps = 14/448 (3%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +++++  +++A     AH L  E    G   D +TY+T++    K      A++ ++++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            +  +  +  Y+ L+    K+    +AI +  ++  +G  PD+V Y ++I+  GK K   
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  L +EM  +G+  DTV Y+ L+   ++  K  +A SV+  M    C  D+ T + MI
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D   +      A R+F SM   G+ P+ V Y+ L+    +A     A+ +   M++    
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            + +TYN +I    KS +   A     EM   G +P+  TY+ +I+ + KAG  D A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F  + SS    + V Y T+I    +   +  A      +++    P++    + +  L +
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG----YFP 433
           +G++E    +F +   +G V +      +I    +  +    + +F  +R  G    Y  
Sbjct: 362 SGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAY 420

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEM 461
           +S I AL+ +  GK+ E +    +Y EM
Sbjct: 421 NSIISALIKS--GKVNEGQA---VYQEM 443



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 192/414 (46%), Gaps = 5/414 (1%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           T+S LI    K GM   A S  Q+   +  + D+  Y+ +++   K     +A+++  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            ++G  P +  YN ++N   K    +EA  L+ ++ + G  PD V+Y++L++   +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EA  +F EM      LD      +I    Q      A  ++ +M   G  P VV+ +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +A   G A+ +F+ M+ + +  N V Y+ +I    K+ + + A  ++ +M+    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            P+ ITY+ +I    K+G +  A   F ++  +G + D   Y  +I  + + G    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 356 LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           +  ++      PN +   T I+ L +  ++ +A+  ++   + G   D  V+  +++   
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++ K      +F++M  +G   +S     ++    K    + A  L++ +++EG
Sbjct: 361 KSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 413



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 194/415 (46%), Gaps = 13/415 (3%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           ++ +IN   KA +  +A  L +E    G   D  +Y+T+++   +N K  EA+++  ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              C   + T N +++   ++   ++A  L   +   G  P VV+Y +L+   G+ +   
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  LF+ M  + +  + V Y  +I+   ++ +  +A+++ + M ++G  P+ +T ST+I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
               KAG++  A  +F+ + + G+  + V+Y  +I    +   +  A  +L ++++    
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+TI     I  L ++G +  A   F +  +AG   D+  +  +I  F +         V
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM---LSL 479
           F+ M S+   P+      +++   K R+   A   Y  M+E GC     V+  +   L  
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 480 YGARKDFNMLESLFERLD-SDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            G  +   ML    ER   ++S    + + H+      +ANR+++A  + N + K
Sbjct: 362 SGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC-----KANRVDEAVSLFNAIRK 411



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 161/383 (42%), Gaps = 33/383 (8%)

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           ++S L+N  V+    ++A S+  E     C +D+ T   ++D   +    ++A  L   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G  P++ +YN LL    +     EAI L R +       +VVTY ++I   GK    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  L +EM +RG+  + + Y+ +I    +AGK+ +A+ +++ + S G   D V   TM
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I                                 L +AGRI  A  +F+     G   + 
Sbjct: 181 IDG-------------------------------LCKAGRIGAAVRIFKSMEARGLAPNE 209

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            V+  +I    + +K    +E+  +M+ A   PD+    ++++   K  +   A   + E
Sbjct: 210 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDE 269

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD-SNINKKELHHVVAGIYERAN 519
           M E GC      +  ++S +    + +    +F+ + S   + N      +++G+ +R  
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR-R 328

Query: 520 RLNDASRIMNRMNKRRTFNSSLV 542
           +L  AS     M +R     S V
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFV 351


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 190/397 (47%), Gaps = 39/397 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   SP+V  Y  ++    +     LA  LF +M + G+ P+ +TYS L+  F K+G  
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQG-- 242

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                 LQ+                           +   ++  +K SGIVP+  AYN +
Sbjct: 243 ------LQR---------------------------EGFQMYENMKRSGIVPNAYAYNCL 269

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ +    +  +A  +  EMRE+G+    ++Y+ L+       KF EA+ +  ++N+V  
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T NI+I+ +  +     A RLF  ++  G+ P++V+YNTL+  Y + E    A+ 
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M+ + I  + VTY  +I  + +    EKA  +   M+  G+ P+  TYS ++    
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G +  A+ LF+ L    ++ + V+Y TMI  Y + G    A RLL+E+ Q    PN  
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVA 509

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
              + I +L R  + +EA  +  Q  ++G    +S++
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 159/325 (48%), Gaps = 6/325 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+V++    +         +++ M++ GI P+ Y Y+ LI+ +  +GM D A   
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  ++  ++ Y+ LI    +   + +A+ +  ++   G+ P++V YN +IN F  
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +    A  L  +++  G+ P  V+Y+TL+  Y +      AL +  EM E        T
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAELFGEAIHLFR 253
             I+ID + +L+  + A  +   M K G+ P V +Y+ LL    V+G  +   EA  LF+
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMK---EASKLFK 462

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    ++ N V YNTMI  Y K     +A  L+ EM   G+ PN  ++ + I +  +  
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDE 522

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQ 338
           K   A +L  ++ +SG++    LY+
Sbjct: 523 KWKEAELLLGQMINSGLKPSVSLYK 547



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 216/449 (48%), Gaps = 14/449 (3%)

Query: 29  VLRAKQWELAHGLFDEMRQRGIAP-DRYT--YSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           +LR     +   L  ++ Q    P   YT  Y T++  +      D A+++L  M  +  
Sbjct: 61  ILRLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHE-- 118

Query: 86  SGDLVL---YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
            G + L   ++NL+ L  + + + KA  IF+ LKS  +V D  ++  MI    +A  F +
Sbjct: 119 -GHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVK 176

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
              L+  + E G+ P+ V Y+TL++   ++   + A ++F +MN +    +  T +++++
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMN 236

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            + +  + ++  +++ +M++ GI P+  +YN L+  Y    +  +A  +F  M+ K I  
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIAC 296

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            V+TYN +I    +  +  +A  L+ ++   G+ PN +TY+ +I  +    K+D A  LF
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLF 356

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARA 378
            +L+SSG+    V Y T+I  Y +V  +A A  L+ E+ +    P +   TIL    AR 
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
              E+A  +      +G V D+  +  ++     +       ++F+ +      P+S I 
Sbjct: 417 NHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCV 467
             +++ Y K      A  L +EM + G V
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVQSGMV 505



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 10/299 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAI 74
           P+ +AYN ++         + A  +F EMR++GIA    TY+ LI   C GK+  F  A+
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK--FGEAV 318

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + ++ +  +S ++V Y+ LI     +     A+ +F++LKSSG+ P LV YNT+I  +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +    A  L++EM E+ + P  V+Y+ L++ +   +   +A  + + M +     D+
Sbjct: 379 SKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDV 438

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T ++++    V+G +   K+A +LF S+ +M + P+ V YNT++  Y +      A+ L
Sbjct: 439 YTYSVLLHGLCVHGNM---KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
              M +  +  NV ++ + I +  +  + ++A  L+ +M N G++P+   Y  +  + G
Sbjct: 496 LNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 218/500 (43%), Gaps = 34/500 (6%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           LF+    +G+    ++ S ++      GM   A S + ++   R+   L+L     +L +
Sbjct: 25  LFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLML-----QLTQ 79

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               +    S ++ L           Y+T++N +  +    +A   +  M  +G  P + 
Sbjct: 80  A---HFTPCSTYTPL-----------YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSN 125

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++ LL L + ++ F +A  +F E+      LD  +  IMI    +        RL   +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            + G+ P+VV Y TL+    +      A +LF  M R  +  N  TY+ ++  + K    
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +   + + M+  GI PNA  Y+ +I+ +   G +D+A  +F ++R  G+    + Y  +
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    R      A +L+H++ +    PN +     I       +++ A  +F Q   +G 
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL 364

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              +  +  +I  +S+ +  A  +++ ++M      P      ++++++ +L   E A +
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE 424

Query: 457 LYSEMQEEGC---VFSDQVHFQMLSLYGARKDFN-MLESLFE-RLDSDSNINKKELHHVV 511
           ++S M++ G    V++  V    L ++G  K+ + + +SL E  L  +S I    +H   
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG-- 482

Query: 512 AGIYERANRLNDASRIMNRM 531
              Y +      A R++N M
Sbjct: 483 ---YCKEGSSYRALRLLNEM 499



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 119/226 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN+++      ++ + A  LF++++  G++P   TY+TLI  + K      A+ 
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++ME+  ++   V Y+ LI+   +L+   KA  + S ++ SG+VPD+  Y+ +++   
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                KEA  L + + E  ++P++V Y+T+++ Y +      AL +  EM +     ++ 
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVA 509

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           +    I +  + +  K+A+ L   M   G+ PSV  Y  + +V G+
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGD 555


>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 404

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 184/371 (49%), Gaps = 19/371 (5%)

Query: 95  LIELARKLSDYSKAISIFS-RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
           L EL R+  D+   + +FS   K S   P+   Y  +I   G+      A LL +EM  +
Sbjct: 17  LTELQRQ-HDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLE 75

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEM---NEVNCPLDLTTCNIMIDVYGQLDMA 210
             + D  +Y+ L+N Y +   F EAL+VF+ M   NE NC  +  TCN +ID   +  + 
Sbjct: 76  KCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLY 135

Query: 211 KDADRLFWSMR------KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
             A ++F+ MR      + G +P+V++YN L+    +  L    + + + M+    +Q+V
Sbjct: 136 DQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSV 195

Query: 265 ----VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
                TYNT+I   GK   +EKA  L+  M   G++P+ ITY+ +I  +GKAG  + A  
Sbjct: 196 QPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAEN 255

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILA 376
            F+ ++ + V +D + Y  MI AY R GL   A    K + H   +PN +   + +    
Sbjct: 256 TFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYG 315

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +AG  EE+  VF    ++G   ++ ++  +I+ + +   Y     + + MR AG  P+  
Sbjct: 316 KAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLI 375

Query: 437 IIALVLNSYGK 447
             + +L+S  K
Sbjct: 376 TYSAILSSCCK 386



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 191/405 (47%), Gaps = 27/405 (6%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFD-EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           S F    VL  + R   W     +F    +Q    P+   Y+ LI   G+EG   +A   
Sbjct: 9   SPFDITCVLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLL 68

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG---IVPDLVAYNTMINV 133
            Q+M  ++   D   Y+ L+    K   + +A+++FS +K S      P+ V  N +I+ 
Sbjct: 69  FQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDA 128

Query: 134 FGKAKLFKEARLLIEEMR------EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             K  L+ +A  +  +MR      E G +P+ ++Y+ L++   +       + V   M +
Sbjct: 129 LVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRD 188

Query: 188 VNCPLDL----TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            N    +     T N +I+  G+  + + A+ L   M + G+ P  ++Y  L+  YG+A 
Sbjct: 189 GNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAG 248

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L+  A + F+ M+   +  +V+ Y  MI  YG+   ++KA  + + MQ+ G+ PN +TY 
Sbjct: 249 LWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYL 308

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-- 361
           +++  +GKAG  + +  +F  +R SG E + ++Y ++I AY + G    A R+L  +R  
Sbjct: 309 SLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRA 368

Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             QPN I     ++   ++       WV  Q      ++ + VFG
Sbjct: 369 GCQPNLITYSAILSSCCKSN-----CWVEAQVL----LRRLQVFG 404



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 184/373 (49%), Gaps = 13/373 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +  W  +++ Y P+   Y  ++  + R  +   A  LF EM       D+YTY+ L+
Sbjct: 29  TLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALV 88

Query: 62  TCFGKEGMFDSAISWLQQMEQDR---VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
             +GK  MF+ A++    M++        + V  + LI+   K   Y +AI +F  ++  
Sbjct: 89  NAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDG 148

Query: 119 ------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE----QGVKPDTVSYSTLLNL 168
                 G  P+++ YN +I+   K  L      +++ MR+    Q V+P++ +Y+TL+N 
Sbjct: 149 TNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINA 208

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             +   + +A  +   M E     D  T   +ID YG+  + ++A+  F  M+   +   
Sbjct: 209 CGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVD 268

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           V++Y  ++  YG   L+ +A  +F++MQ   +  N VTY ++++ YGK+   E++ N+  
Sbjct: 269 VMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFN 328

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M+  G E N + YS++I  +GKAG    AA +   +R +G + + + Y  ++ +  +  
Sbjct: 329 IMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKSN 388

Query: 349 LVAHAKRLLHELR 361
               A+ LL  L+
Sbjct: 389 CWVEAQVLLRRLQ 401



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 46/348 (13%)

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P++  Y+ L+       +   A  +F EM    C  D  T   +++ YG+  M ++A  +
Sbjct: 44  PNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAV 103

Query: 217 FWSMRKMG---IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ------RKEIEQNVVTY 267
           F  M++       P+ V+ N L+    +  L+ +AI +F  M+          E NV+TY
Sbjct: 104 FSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITY 163

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQN----RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           N +I    K    +    ++Q M++    + ++PN+ TY+T+I   GK G  ++A  L  
Sbjct: 164 NVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVD 223

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 383
            +   GV+ D + Y  +I AY + GL  +A+     ++  N       +++         
Sbjct: 224 LMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTN-------VSV--------- 267

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
                          D+  +  MI+ + R   Y    E+F+ M+ +G  P+      ++ 
Sbjct: 268 ---------------DVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLME 312

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
           +YGK    E + ++++ M+E G   +  ++  ++  YG  K  N LE+
Sbjct: 313 AYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYG--KAGNYLEA 358



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/315 (20%), Positives = 122/315 (38%), Gaps = 38/315 (12%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P D+T   ++ ++  Q D     +   WS ++    P+   Y  L+   G       A  
Sbjct: 10  PFDITC--VLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATL 67

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL---MQEMQNRGIEPNAITYSTIIA 307
           LF+ M  ++ + +  TY  ++  YGK+   E+A  +   M+E      +PN +T + +I 
Sbjct: 68  LFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALID 127

Query: 308 IWGKAGKLDRAAMLFQKLRSS------GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
              K G  D+A  +F  +R        G E + + Y  +I A  + GL+    ++L  +R
Sbjct: 128 ALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMR 187

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             NT                           D     + + +  +I    +   Y    E
Sbjct: 188 DGNT---------------------------DQSVQPNSATYNTLINACGKGGLYEKAEE 220

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           + + M   G  PD      ++++YGK   +E A++ +  M+          +  M+  YG
Sbjct: 221 LVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYG 280

Query: 482 ARKDFNMLESLFERL 496
               +   E +F+ +
Sbjct: 281 REGLYQKAEEMFKMM 295


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 244/563 (43%), Gaps = 45/563 (7%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           VFAYN ++    R  + + A  L   M    + PD YTY+ LI      G    A+S L 
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLD 161

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M +      +V Y+ L+E   K S + +A+ +   +++ G  P++V YN +IN   +  
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LY---VENH--------- 173
              +AR ++  +   G +PDTVSY+T+L              L+   VEN+         
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281

Query: 174 ---------KFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                      VE A+ V   M+E  C  + T CNI+I+   +     DA     +M   
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G  P  +SY T+L+    A  + +A  L   M RK    N VT+NT I I  +    ++A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             L+++M   G     +TY+ ++  +   G++D A  LF  L     E + + Y T++  
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTG 458

Query: 344 YERVGLVAHAKRLLHELRQ---P-NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
                 +  A  LL E+ Q   P N +     ++   + G +EEA  + +Q  + G   +
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  F  +++  + +      +E+   + S G   D+   + +++   +    E A  ++ 
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFH 578

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            +Q+ G      ++ ++LS    R + +     F  + S+S +  +  + ++     R  
Sbjct: 579 AVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREG 638

Query: 520 RLNDASRIMNRMNKRRTFNSSLV 542
            L +A  +++ +  R   + SL+
Sbjct: 639 LLKEARYVLSELCSRGVLSKSLI 661



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 40/454 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P   +Y  VL+ +  AK+WE    LF EM +    P+  T+  L+  F + GM + AI
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M +   + +  L + +I    K      A    + + S G  PD ++Y T++   
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A  +++A+ L+ EM  +   P+ V+++T + +  +     +A+ +  +M E  C + +
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGI 417

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T N +++   V G++D A +   LF S   +  +P+ ++Y TLL     AE    A  L
Sbjct: 418 VTYNALVNGFCVQGRVDSALE---LFNS---LPCEPNTITYTTLLTGLCHAERLDAAAEL 471

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M + +   NVVT+N ++  + +    E+A  L+Q+M   G  PN IT++T++    +
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
               + A  L   L S G+ +D + Y ++                               
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSI------------------------------- 560

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           + +L+R  RIEEA  +F    D G      ++  ++    +  +    I+ F  M S   
Sbjct: 561 VDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSC 620

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+     +++    +    + A  + SE+   G
Sbjct: 621 MPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 208/500 (41%), Gaps = 13/500 (2%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LR ++       A  L +    RG APD Y  + LI    + G    A   L+  E    
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             D+  Y+ L+        Y +  +    + S  + PD   Y  +I          +A  
Sbjct: 102 PVDVFAYNTLVA---GYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+++M  +  +P  V+Y+ LL    ++  F +A+ V  EM    C  ++ T N++I+   
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           + D   DA ++   +   G  P  VSY T+L+    A+ + +   LF  M       N V
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++ +++ + +    E+A  ++  M   G   N    + +I    K G++D A      +
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRI 381
            S G   D + Y T++    R G    AK LL+E+ + N  P E    T I IL + G I
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           ++A  +  Q  + G    I  +  ++  F    +  + +E+F  +      P++     +
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTL 455

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERLDSD 499
           L         + A +L +EM +  C   + V F +L  +  +K F    +E + + ++  
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPL-NVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 500 SNINKKELHHVVAGIYERAN 519
              N    + ++ GI E  N
Sbjct: 515 CTPNLITFNTLLDGITEDCN 534



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 112/294 (38%), Gaps = 48/294 (16%)

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L++   +RG  P+    + +I    + G+   AA + +    SG  +D   Y T++
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWV---------- 387
             Y R G +  A+RL+  +  P   P     T L R     GR+ +A  +          
Sbjct: 113 AGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169

Query: 388 ------------------FRQAFDA-------GEVKDISVFGCMIELFSRNKKYANVIEV 422
                             F QA          G   +I  +  +I    R  +  +  ++
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             ++ S G+ PD+     VL      + +E  + L+ EM E  CV  ++V F ML  +  
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV-PNEVTFDMLVRFFC 288

Query: 483 RKDFNMLESLFERLDSDSN---INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           R    M+E   E LD  S         L ++V     +  R++DA   +N M  
Sbjct: 289 RG--GMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 226/469 (48%), Gaps = 30/469 (6%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E R  P+    N +L  + R +  ELA  LF+++     AP+ +T++ +I    KEG   
Sbjct: 156 ELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLA 211

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A + L +M+    S D+V Y++LI+   K  +  +   +   ++  G  PD+V YN ++
Sbjct: 212 EARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALV 271

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM------ 185
           N F K    + A     EM+ +GV  + V++ST ++ + +N    EA+ +FA+M      
Sbjct: 272 NCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMK 331

Query: 186 -NEV--NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            NEV   C +D  TC       G+LD   DA  L   M + G+  +VV+Y  L+    + 
Sbjct: 332 PNEVTYTCLVD-GTCK-----AGRLD---DALVLTNEMVQQGVPLNVVTYTVLVDGLCKE 382

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA  +FRLM+R  I  N + Y T+I  +      E+A +L+ EM+++G+E +   Y
Sbjct: 383 GKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLY 442

Query: 303 STIIAIWGKAG--KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             +  IWG     KLD A  L  K+   G++ + V+Y  ++ A  +    + A  LL ++
Sbjct: 443 GAL--IWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500

Query: 361 R----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                +PN +     +  L +AG I+EA   F +  D G   ++  +  +++   +N + 
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              + + ++M   G   D+ +   +++ + K    + A  L ++M   G
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 227/479 (47%), Gaps = 11/479 (2%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L W   E   +P+VF +N+++  + +      A  L   M+  G +PD  TY++LI  +G
Sbjct: 181 LAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYG 240

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G  +     + +M       D+V Y+ L+    K     +A S F+ +K  G++ ++V
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVV 300

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            ++T ++ F K  + +EA  L  +MR +G+KP+ V+Y+ L++   +  +  +AL +  EM
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEA 242
            +   PL++ T  +++D   +     +A+ +F  M + GI  + + Y TL+    VY  +
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           E    A+ L   M+ K +E +V  Y  +I       + ++A +L+ +M   G++PN + Y
Sbjct: 421 E---RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG----LVAHAKRLLH 358
           + I+    KA K   A  L QK+  SG   + V Y  ++    + G     ++H  +++ 
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD 537

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              +PN       +  L + GR+++A  +  +  D G   D  V   +++   +     +
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              +  KM ++G   D +     +  +  L   + A ++ SEM E G +  D V +  L
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG-ITPDAVVYNCL 655



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 192/402 (47%), Gaps = 32/402 (7%)

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           S  L L ++++  AR L  +S+  S+ SRL + G  P L A  +++++  +A L    R 
Sbjct: 70  SAHLCLAAHILARAR-LFPHSR--SLLSRLLAPGHHPHLAA--SLVDLLHRAALALGPR- 123

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
                  +   P  V   TLL+L  +     +A+   A + E+  P +  TCN ++    
Sbjct: 124 -------RSALPSVVD--TLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL---- 170

Query: 206 QLDMAKD-ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            L +A++ +  L W + +    P+V ++N ++    +     EA  L   M+      +V
Sbjct: 171 -LCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDV 229

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTYN++I  YGK  E E+   L+ EM+  G  P+ +TY+ ++  + K G+++RA   F +
Sbjct: 230 VTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAE 289

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGR 380
           ++  GV  + V + T + A+ + G+V  A +L  ++R     P E   T L     +AGR
Sbjct: 290 MKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGR 349

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           +++A  +  +    G   ++  +  +++   +  K A   +VF  M  AG   +  +   
Sbjct: 350 LDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           +++ +   +  E A  L SEM+++G           +SLYGA
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELD-------VSLYGA 444


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 5/377 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V+ Y +++R++    + +    LF+ M  +G  P+ +TY +++  FG  G  D A  
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             QQM Q  +  D V Y+ LI+   K     +A     + +S     + V YN++++  G
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNSLLSSLG 248

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +    +    L  +M+ +G+  + ++Y+ L+       +  +   ++ EM + +   D+ 
Sbjct: 249 RKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIV 308

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++D   +    + A  LF  M+  G++   V+YN L+   G A     A  L   M
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +      N++TYNT+I  YGK      AT L  EM+ RG+ PN ++YS++I  +GKAG+ 
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A  LF+++++ G   + V Y  +I    R G    A   L E+R       +   ++L
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLL 488

Query: 376 AR--AGRIEEATWVFRQ 390
            R     +EEA   F++
Sbjct: 489 VRIPPQYMEEAQSFFQE 505



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 198/404 (49%), Gaps = 10/404 (2%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            L+  AR+  D  + +    + ++     D   +NT+I+++G+A + ++A   +    ++
Sbjct: 3   TLLGAARRYDDVQRLVESMQKDRTK---LDTQLFNTLIHIYGEANMMEKALQTLAAFTKE 59

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G +P   +YS+++ ++++       L ++ +M +     D TT NI+ID   + D  ++A
Sbjct: 60  GGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEA 119

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             +F  M K+ + P V +Y  L+R  G        + LF  M  +  + N+ TY++++  
Sbjct: 120 CNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +G +   ++A ++ Q+M  +G++P+A+TY+ +I  +GK G+L+RA     K RS   E  
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE-- 237

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFR 389
            V Y +++ +  R G +     L  +++    +  E    IL      AGR+E+   ++ 
Sbjct: 238 -VTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  D     DI     +++  S+  +     E+F+ M+  G   D+    +++N  G+  
Sbjct: 297 EMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           + + A  L  EM+E GC  +   +  ++S YG   + +    LF
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLF 400



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 201/422 (47%), Gaps = 15/422 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y+ +++  ++    +    ++ +M +    PD  T++ LI    K    + A + 
Sbjct: 63  PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M +  VS D+  Y+ LI     +      + +F  + + G  P+L  Y+++++ FG 
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE----MNEVNCPL 192
           A    EA  + ++M ++G++PD V+Y+ L++ + +  +   A     +     NEV    
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS 242

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L++     D+ G ++       LF  M+  G+  + ++Y  L+   G A    +   L+
Sbjct: 243 LLSSLGRKGDIQGLME-------LFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M   +I+ ++VT N ++    K+   E A  L Q+M+ +G+  + +TY+ +I   G+A
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           GKLD A  L  ++  +G   + + Y T+I +Y +   ++ A RL  E+++    PN +  
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I    +AGR + A  +FR+    G   +   +  +I+   R  ++   +E   +MR 
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475

Query: 429 AG 430
           AG
Sbjct: 476 AG 477



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 200/449 (44%), Gaps = 7/449 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N ++     A   E A        + G  P  YTYS++I  F K G   + +   +QM 
Sbjct: 33  FNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQML 92

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           + +   D   ++ LI+   K     +A ++F  +    + PD+  Y  +I   G      
Sbjct: 93  KAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRID 152

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
               L E M  QG +P+  +Y ++++ +    +  EA  +F +M +     D  T NI+I
Sbjct: 153 AVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILI 212

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           D +G+       +R F  + K     + V+YN+LL   G        + LF  M+ K + 
Sbjct: 213 DAFGK---TGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLV 269

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N +TY  +I+  G +   E    L  EM +  I+ + +T + ++    KAG+++ A  L
Sbjct: 270 SNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFEL 329

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           FQ ++  G+  D V Y  +I    R G +  A  LL E+ +    PN I   T I+   +
Sbjct: 330 FQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
              +  AT +F +  + G   ++  +  +IE F +  +    I +F +M++ G  P+   
Sbjct: 390 WSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVT 449

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGC 466
             L+++   +   F  A +   EM++ GC
Sbjct: 450 YNLLIDCLIRAGRFGAAMEYLREMRDAGC 478



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 43/177 (24%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P++  YN ++ +  +      A  LF EM++RG+AP+  +YS+LI  FGK G  
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+AIS  ++M                                   K+ G  P+ V YN +
Sbjct: 429 DAAISLFREM-----------------------------------KAEGCPPNHVTYNLL 453

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL---YVENHKFVEALSVFAE 184
           I+   +A  F  A   + EMR+ G +   V+ S L+ +   Y+E     EA S F E
Sbjct: 454 IDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRIPPQYME-----EAQSFFQE 505


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 204/438 (46%), Gaps = 13/438 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSV+  N+VL ++++ ++ ++    F  M  +GI PD  T++ L+    + G F +A  
Sbjct: 137 NPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGF 196

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++ME+  V    V Y+ L+    K   Y  A  +   + S GI  D+  YN  I+   
Sbjct: 197 LLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLC 256

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     +  LL++ MR   V P+ ++Y+TL++ +V   K   A  VF EM+  N   +  
Sbjct: 257 RDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSI 316

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-VYGEAELFGEAIHLFRL 254
           T N +I  +       +A RL   M   G+ P+ V+Y  LL  +Y  AE FG    +   
Sbjct: 317 TYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE-FGMVSSILER 375

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +  + ++Y  MI    K+   E+A  L+ +M    + P+ +T+S +I  + + GK
Sbjct: 376 MRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGK 435

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           ++ A  +  K+  +G+  + +LY T+I  Y ++G +  A      +     +       +
Sbjct: 436 INNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNV 495

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     R G++EEA +        G   +   F C+I  +  +        VF+KM S G
Sbjct: 496 LVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG 555

Query: 431 YFPDSHIIALVLNSYGKL 448
           +FP        L +YG L
Sbjct: 556 HFPS-------LFTYGGL 566



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 213/472 (45%), Gaps = 5/472 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++   +R  + E+A  +FDEM    + P+  TY+TLI      G    A+  
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  M    +  + V Y  L+    K +++    SI  R++  G+    ++Y  MI+   K
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             + +EA  L+++M +  V PD V++S L+N +    K   A  +  +M +     +   
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  Y ++   K+A   +  M   G      + N L+  +       EA +    M 
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R  ++ N VT++ +I  YG S +  KA ++  +M + G  P+  TY  ++      G ++
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A   F +LR     +D V++ T + +  R G ++ A  L++E+      P+       I
Sbjct: 578 EALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637

Query: 373 TILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             L + G+I  A  +  +A + G +  + +V+  +++   ++      + +FE+M +   
Sbjct: 638 AGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDV 697

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
            PD+    ++++ Y +  +    +D+ S M+ +   F+   +  +L  Y  R
Sbjct: 698 EPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKR 749



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 223/527 (42%), Gaps = 20/527 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF  ++++R  LR +    A   F  M  RG+ P  YT + ++    KE   D   S
Sbjct: 104 NPAVF--DLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWS 161

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           + + M    +  D+  ++ L+    +   +  A  +  +++ SG+ P  V YNT++N + 
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYC 221

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   +K A  LI+ M  +G+  D  +Y+  ++    + +  +   +   M       +  
Sbjct: 222 KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEI 281

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I  + +    + A ++F  M    + P+ ++YNTL+  +      GEA+ L  +M
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N VTY  ++    K+ E    +++++ M+  G+  + I+Y+ +I    K G L
Sbjct: 342 VSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           + A  L   +    V  D V +  +I  + RVG + +AK ++ ++ +    PN I   T 
Sbjct: 402 EEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTL 461

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    + G ++EA   +     +G V D      ++  F R  K          M   G 
Sbjct: 462 IYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGL 521

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA-------RK 484
            P+S     ++N YG   +   A  ++ +M   G       HF  L  YG          
Sbjct: 522 DPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG-------HFPSLFTYGGLLKGLCIGG 574

Query: 485 DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             N     F RL    N     + +       R+  L+DA  ++N M
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEM 621



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/622 (20%), Positives = 252/622 (40%), Gaps = 94/622 (15%)

Query: 4   AILDWINEEARYSPS---------------VFAYNVVLRNVLRAKQWELAHGLFDEMRQR 48
            +L+W  ++ RY  +               V  YNV + N+ R  +    + L   MR+ 
Sbjct: 215 TLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRN 274

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
            + P+  TY+TLI+ F +EG  + A     +M    +  + + Y+ LI       +  +A
Sbjct: 275 MVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEA 334

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           + +   + S G+ P+ V Y  ++N   K   F     ++E MR  GV+   +SY+ +++ 
Sbjct: 335 LRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDG 394

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             +N    EA+ +  +M +V+   D+ T +++I+ + ++    +A  +   M K G+ P+
Sbjct: 395 LCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            + Y+TL+  Y +     EA++ + +M       +  T N ++  + +  + E+A   M 
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAG----------------------------------- 313
            M   G++PN++T+  II  +G +G                                   
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-------------- 359
            ++ A   F +LR     +D V++ T + +  R G ++ A  L++E              
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 360 --------------------------LRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
                                     L  PN     + +  L + G    A ++F +  +
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                D   F  +I+ +SR  K + V ++   M+S     +     ++L+ Y K      
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSL-YGARKDFNMLESLFERLDSDSN-INKKELHHVV 511
              LY +M   G    D+  +  L L Y   K F++   +   +  + + I++   + ++
Sbjct: 755 CFMLYKDMIRHG-FLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLI 813

Query: 512 AGIYERANRLNDASRIMNRMNK 533
               ER N +  A  ++ +MN+
Sbjct: 814 TKFCER-NEMKKAFELVKQMNQ 834



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 204/468 (43%), Gaps = 6/468 (1%)

Query: 1    RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            ++ ++ D +N    + PS+F Y  +L+ +        A   F  +R    A D   ++T 
Sbjct: 543  KAFSVFDKMNSFGHF-PSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTK 601

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            +T   + G    AI+ + +M  +    D   Y+NLI    K      A+ +  +    G+
Sbjct: 602  LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661

Query: 121  V-PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            + P+   Y ++++   K    + A  + EEM  + V+PDTV+++ +++ Y    K  +  
Sbjct: 662  LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 180  SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + + M   N   +L T NI++  Y +         L+  M + G  P   S+++L+  Y
Sbjct: 722  DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781

Query: 240  GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             +++ F  AI + R +  +    +  T+N +I  + +  E +KA  L+++M    + PN 
Sbjct: 782  CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841

Query: 300  ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             TY+ +     +     +A  + Q L  SG       Y T+I    RVG +  A +L  E
Sbjct: 842  DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 360  LRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            ++         A++     LA + +IE A WV     +   +  ++ F  ++ ++ +   
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961

Query: 416  YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             A  +E+   M       D     ++++      + E A  LY EM++
Sbjct: 962  VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQ 1009



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 35/292 (11%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            + P  F+++ ++    ++K +++A  +   +   G   DR+T++ LIT F +      A 
Sbjct: 767  FLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAF 826

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++QM Q  V  ++  Y+ L     + SD+ KA  +   L  SG VP    Y T+IN  
Sbjct: 827  ELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGM 886

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +    K A  L +EM+  G+    V+ S ++     + K   A+ V          LDL
Sbjct: 887  CRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWV----------LDL 936

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                                     M +M I P+V ++ TL+ VY +     +A+ L  +
Sbjct: 937  -------------------------MLEMQIIPTVATFTTLMHVYCKEANVAKALELRSI 971

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            M+   ++ +VV YN +I     + + E A  L +EM+ R + PN   Y  +I
Sbjct: 972  MEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLI 1023



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/368 (20%), Positives = 162/368 (44%), Gaps = 6/368 (1%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E+   SP+   Y  ++  +L+      A  +F+EM  + + PD   ++ +I  + ++G  
Sbjct: 658  EKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKT 717

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                  L  M+   +  +L  Y+ L+    K    ++   ++  +   G +PD  +++++
Sbjct: 718  SKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSL 777

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I  + ++K F  A  ++  +  +G   D  +++ L+  + E ++  +A  +  +MN+   
Sbjct: 778  ILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV 837

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              ++ T N + +   +      A R+   + + G  P+   Y TL+           A+ 
Sbjct: 838  IPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMK 897

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT---NLMQEMQNRGIEPNAITYSTIIA 307
            L   M+   I  + V  + +++    S + E A    +LM EMQ   I P   T++T++ 
Sbjct: 898  LQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ---IIPTVATFTTLMH 954

Query: 308  IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            ++ K   + +A  L   +    V++D V Y  +I      G +  A +L  E++Q +  P
Sbjct: 955  VYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWP 1014

Query: 368  RETAITIL 375
              +   +L
Sbjct: 1015 NTSIYIVL 1022


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 217/453 (47%), Gaps = 12/453 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+VF YNV++  + + K+   A  LF EM  R + P+R T++TLI  + K G  D AI  
Sbjct: 99  PNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGL 158

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M++++V   ++ +++L+    K     +A  + + +K +G VPD   Y+ + +   K
Sbjct: 159 RERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLK 218

Query: 137 AKLFKEARL-LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     A L L  E   +GVK D  + S LLN   +  K  +A  V   + E        
Sbjct: 219 SDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEV 278

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             N +++ Y Q+    D DR   ++ +M   G+ P+ +++N+++  + E ++  +A    
Sbjct: 279 IYNTIVNGYCQIG---DMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWV 335

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M  K I  +V TYN +I  YG+     +   +++EM+  G +PN I+Y ++I    K 
Sbjct: 336 KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           GK+  A M+ + +   GV  +  +Y  +I     VG +  A R   E+ +       +  
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + I  L + G+++EA  +F      G   D+  +  +I  +S        +E++E M+ 
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            G  P  +    +++   K    +  + L++EM
Sbjct: 516 LGLKPTINTFHPLISGCSK-EGIKLKETLFNEM 547



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 211/472 (44%), Gaps = 34/472 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           +  +++L  + +  + E A  +   + + G+ P    Y+T++  + + G  D AI  ++Q
Sbjct: 243 YTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQ 302

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME   +  + + ++++I+   ++    KA     ++   GI P +  YN +I+ +G+  +
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           F     ++EEM E G KP+ +SY +L+N   ++ K +EA  V  +M       +    N+
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID    +   ++A R F  M K GI  ++V+YN+L++   +     EA  +F L+    
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +V+TYN++I  Y  +   +K   L + M+  G++P   T+  +I+   K G +    
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKE 541

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
            LF ++    +  D V+Y  MI  Y+  G V  A  L  E+                   
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM------------------- 582

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                        D G   D   +  +I    +  K +   ++ + M++ G  P++   +
Sbjct: 583 ------------VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
           L++  +  L++F  A   Y EM E G  F   V        G RKD  + E+
Sbjct: 631 LLIQGHCDLKDFNGAYVWYREMLENG--FLPNVCICNELSTGLRKDGRLQEA 680



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 177/362 (48%), Gaps = 1/362 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN ++    +    + A    ++M  RG+ P+   ++++I  F +  M D A  W
Sbjct: 275 PGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEW 334

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M    ++  +  Y+ LI+   +L  +S+   I   ++ +G  P++++Y ++IN   K
Sbjct: 335 VKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCK 394

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA +++ +M  +GV P+   Y+ L++      K  EAL  F EM++      + T
Sbjct: 395 DGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVT 454

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I    ++   K+A+ +F+ +   G  P V++YN+L+  Y  A    + + L+  M+
Sbjct: 455 YNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK 514

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  ++  + T++ +I    K     K T L  EM    + P+ + Y+ +I  + + G + 
Sbjct: 515 KLGLKPTINTFHPLISGCSKEGIKLKET-LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A  L +++   GV  D   Y ++I+ + + G ++  K L+ +++    IP     ++L 
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633

Query: 377 RA 378
           + 
Sbjct: 634 QG 635



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 199/437 (45%), Gaps = 19/437 (4%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L+D MRQ G  P       ++    +   FD+ +   ++M       D ++Y   +  A 
Sbjct: 18  LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAV 77

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL D   A+ +F  +K   +VP++  YN +I    K K  ++A  L  EM  + + P+ V
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++TL++ Y +  +   A+ +   M +      + T N ++    +    ++A  +   +
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 221 RKMGIDPSVVSYNTLLR-VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           +  G  P   +Y+ +   +    +  G A+ L+R    K ++ +  T + ++    K  +
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            EKA  +++ +   G+ P  + Y+TI+  + + G +DRA +  +++ S G+  + + + +
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPR-ETAITILARAGRIEEATWVFRQAF------ 392
           +I  +  + ++  A+  + ++      P  ET   ++   GR+     VF + F      
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL----CVFSRCFQILEEM 373

Query: 393 -DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN---SYGKL 448
            + GE  ++  +G +I    ++ K      V   M   G  P+++I  ++++   + GKL
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433

Query: 449 REFETADDLYSEMQEEG 465
           RE   A   + EM + G
Sbjct: 434 RE---ALRFFDEMSKNG 447



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 164/388 (42%), Gaps = 48/388 (12%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSV  YN+++    R   +     + +EM + G  P+  +Y +LI C  K+G    A  
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M    V  +  +Y+ LI+ +  +    +A+  F  +  +GI   +V YN++I    
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEA  +   +   G  PD ++Y++L++ Y       + L                
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCL---------------- 507

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH----L 251
                               L+ +M+K+G+ P++ +++ L+    +     E I     L
Sbjct: 508 -------------------ELYETMKKLGLKPTINTFHPLISGCSK-----EGIKLKETL 543

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +  +  + V YN MI  Y ++   +KA +L +EM + G+ P+  TY+++I    K
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV----GLVAHAKRLLHELRQPNTIP 367
            GKL     L   +++ G+  +   Y  +I  +  +    G     + +L     PN   
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663

Query: 368 RETAITILARAGRIEEATWVFRQAFDAG 395
                T L + GR++EA  +  +    G
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANG 691



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 163/366 (44%), Gaps = 5/366 (1%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +S+   ++  ++  G +P       ++    ++K F     L +EM   G +PD + Y  
Sbjct: 12  HSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGR 71

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
            +   V+      A+ +F  M       ++   N++I    +    +DA++LF  M    
Sbjct: 72  AMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN 131

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P+ V++NTL+  Y +A     AI L   M+++++E +++T+N+++    K+   E+A 
Sbjct: 132 LVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEAR 191

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM-LFQKLRSSGVEIDPVLYQTMIVA 343
            ++ E++  G  P+  TYS I     K+     AA+ L+++    GV+ID      ++  
Sbjct: 192 CMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNG 251

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKD 399
             + G V  A+ +L  L +   +P E    T +    + G ++ A     Q    G   +
Sbjct: 252 LCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              F  +I+ F   +      E  +KM   G  P      ++++ YG+L  F     +  
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILE 371

Query: 460 EMQEEG 465
           EM+E G
Sbjct: 372 EMEENG 377



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 4/332 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   IL+ + EE    P+V +Y  ++  + +  +   A  +  +M  RG+ P+   Y+ L
Sbjct: 365 RCFQILEEM-EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNML 423

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A+ +  +M ++ +   +V Y++LI+   K+    +A  +F  + S+G 
Sbjct: 424 IDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGH 483

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEAL 179
            PD++ YN++I+ +  A   ++   L E M++ G+KP   ++  L++    E  K  E L
Sbjct: 484 CPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL 543

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             F EM ++N   D    N MI  Y +    + A  L   M  MG+ P   +YN+L+  +
Sbjct: 544 --FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +     E   L   M+ K +     TY+ +I+ +    +   A    +EM   G  PN 
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
              + +     K G+L  A  +  ++ ++G++
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 133/305 (43%), Gaps = 5/305 (1%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           +++ V  +  M      L+  MR+ G  PS      ++    E++ F   + LF+ M   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               + + Y   +    K  + + A  L + M+ R + PN   Y+ +I    K  ++  A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITI 374
             LF ++    +  + V + T+I  Y + G V  A    +R+  E  +P+ I   + ++ 
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFSRNKKYANVIEVFEKMRSAGYFP 433
           L +A RIEEA  +  +    G V D   +  + + L   +      ++++ +    G   
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D++  +++LN   K  + E A+++   + E G V  + ++  +++ Y    D +      
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 494 ERLDS 498
           E+++S
Sbjct: 301 EQMES 305


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 223/459 (48%), Gaps = 7/459 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P++  YN++LR++      + A  LF  +R+RG+APDR TYSTL++   K    D+A
Sbjct: 153 RIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNA 212

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMIN 132
           +  L +M    V  D V Y+ L+    +   + KA+ ++ +L +  G  P+L  Y  M++
Sbjct: 213 LDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLD 272

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K   FKEA  +   M     + DTV+Y  L++    +     A  V+++M +    L
Sbjct: 273 GLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D++  N +I  + ++    +A + FW          + +YN + +   ++ +  EA  L 
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWK-FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELL 391

Query: 253 RLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           + ++       + VT+ T+I    ++    +A  ++++ +N G E +  +YS++I  + K
Sbjct: 392 KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCK 451

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G+   A  +++ +   G + +  +Y  +I  + RV  +  A ++  E+      P  I 
Sbjct: 452 DGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIIT 511

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +A + +EA+ + ++  + G   DI  +  +I    R+KK    + +++++ 
Sbjct: 512 YNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL 571

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            AG   D  +  ++++      + + A  +Y EM+E+ C
Sbjct: 572 DAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNC 610



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 214/468 (45%), Gaps = 11/468 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ----RGIAPDRYTYSTLITCFGKEGMFD 71
           +P V ++N +L   +RA+++  A   F  +      R IAP+  TY+ ++      G  D
Sbjct: 116 NPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVD 175

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S    + +  V+ D V YS L+    K      A+ +   + + G+  D V YN ++
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235

Query: 132 NVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +   +  +F++A  + E++ R+ G  P+  +Y  +L+   +  +F EA  V++ M   N 
Sbjct: 236 SGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNH 295

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T  I+I    +      A R++  M K G+   V  YN+L++ + E    GEA  
Sbjct: 296 QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAITYSTIIAIW 309
            +       I Q + TYN M K    S    +AT L+++++N     P+ +T+ T+I   
Sbjct: 356 FWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGL 414

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNT 365
            + G  +RA  + +  R+SG E+D   Y +MI  + + G    A    K ++ +  +PN+
Sbjct: 415 CENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNS 474

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 I    R  +I +A  ++ +    G    I  +  +I+   + +KY     + ++
Sbjct: 475 HVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKE 534

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           M   G+ PD    A ++    + ++ + A  ++ E+ + G      VH
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 149/302 (49%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  +  +A  SP    +  ++  +        A  + ++ R  G   D ++YS++I  F
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K+G    A    + M +D    +  +Y+ LI    ++S  + AI I+  + S+G  P +
Sbjct: 450 CKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTI 509

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT+I+   KA+ ++EA  L +EM E+G KPD  +Y++L+     + K   AL ++ E
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           + +    +D+   NI+I          +A  ++  M++    P++V+YNTL+  + E   
Sbjct: 570 ILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  L+  +    ++ ++VTYNT IK         +   L+ E+   GI P  IT+S 
Sbjct: 630 IDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSI 689

Query: 305 II 306
           ++
Sbjct: 690 LV 691



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 186/419 (44%), Gaps = 39/419 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  Y V+L  + +  +++ A  ++  M       D  TY  LI    + G  DSA  
Sbjct: 261 SPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAAR 320

Query: 76  WLQQMEQDRVSGDLVLYSNLIEL---------------------ARKLSDY--------- 105
               M +  +  D+ +Y++LI+                       R+++ Y         
Sbjct: 321 VYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLD 380

Query: 106 ----SKAISIFSRLKS-SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               S+A  +  +L++ +   PD V + T+I+   +      A  ++E+ R  G + D  
Sbjct: 381 SGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVF 440

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           SYS+++N + ++ +  +A  V+  M +  C  +    N +I+ + ++    DA +++  M
Sbjct: 441 SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G  P++++YNTL+    +AE + EA  L + M  +  + ++ TY ++I+   +  + 
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV 560

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  +  E+ + G++ + + ++ +I     AGK+D A  ++ +++      + V Y T+
Sbjct: 561 DVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL 620

Query: 341 IVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +  +  +G +  A  L    L    +P+ +   T I  L    R  E   +  +    G
Sbjct: 621 MDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 9/221 (4%)

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR----KEIEQNVVTYNTMIKIYGKSL 278
           +G +P V S+NTLL  +  A  + +A   F  +      + I  N+ TYN +++      
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++A +L   ++ RG+ P+ +TYST+++   K  +LD A  L  ++ + GV+ D V Y 
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232

Query: 339 TMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETAITI----LARAGRIEEATWVFRQAFD 393
            ++    R G+   A ++  +L R P   P      +    L + GR +EA  V+ +   
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
                D   +G +I    R+    +   V+  M  AG   D
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 237/527 (44%), Gaps = 9/527 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y  ++  + +A +++ A G+  EM  RG APD  T+STLI    K G  + A  
Sbjct: 75  APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFR 134

Query: 76  WLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            L+ + Q  +      +  +I+ L  K +    A  +   + + G  P ++ +N +IN F
Sbjct: 135 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 194

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KAK    A  L+E M E+G  P+  +++ L+    + ++  EA  +  +M    C  ++
Sbjct: 195 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNV 254

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I+   +     DA  LF  M +    P+VV++N L+    +A+   EA  L+  
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 314

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE-PNAITYSTIIAIWGKAG 313
           M+      +++TYN++I    KS + ++A  L Q +   G+   NA+TYST+   +   G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++  A  +F  L   G   D   Y ++I+ Y +         L+ E+      PR   ++
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM--- 426
                L      E A  +F      G   D  ++  ++E  +R  K+   + V E++   
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           R   + P S  +  ++ S  ++   + A  L  +M E G   +   +  +LS     + +
Sbjct: 495 RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +    +FE + S     +    +VV      A +++DA  ++ RM+K
Sbjct: 555 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 213/470 (45%), Gaps = 14/470 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P+V  +N+V+    +AK  + A+ L + M ++G  P+ +T++ LIT   K      A 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M     S ++V YS +I    K      A  +F  ++     P++V +N +I+  
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLD 193
            KAK  +EAR L   MRE G  PD ++Y++L++   ++ +  EA  +F  + E      +
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T + +   Y  L    DA R+F  +   G  P + +Y +L+  Y +     E + L  
Sbjct: 360 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 419

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEH---EKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            M  K     V   NT+  + G   E    E+A  L   M  RG   +A+ Y+ ++    
Sbjct: 420 EMASKGFPPRV---NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476

Query: 311 KAGKLDRA-AMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           +A K ++A A+L Q +     + +P       ++ +  +VG    AK+LLH++ +     
Sbjct: 477 RASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAA 536

Query: 368 RETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             ++    ++ L+R  R +EAT VF     AG   +IS    +I       K  +  E+ 
Sbjct: 537 AVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 596

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           ++M   G  PD      ++  Y K    + A  L  EM E G   +D  H
Sbjct: 597 QRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 646



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/531 (24%), Positives = 235/531 (44%), Gaps = 53/531 (9%)

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P+++TY  LI  F   G  D AI  L++M+ +   G+ V+++ L+   + L D  + +  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLM---KGLCDAGRVVEA 63

Query: 112 FS--RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
               R  +    PD++ Y  +++   KA  F EA+ ++ EM  +G  PDTV++STL++  
Sbjct: 64  LEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 170 VENHKFVEALSVFAE-----MNEVNCPLDLTT---CN----------------------- 198
            +     +A  V  +     M   +   +      CN                       
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 199 -IMID-VYGQLDMAKDAD---RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            +M + V      AKD D   +L   M + G  P+V ++  L+    +A   GEA  L  
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       NVVTY+T+I    K  + + A  L Q M+ R   PN +T++ +I    KA 
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPR 368
           +++ A  L+ ++R +G   D + Y ++I    +   V  A +L   + +      N +  
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T     A  GR+ +A  +F    D G   D++ +  +I  + +  +   V+E+ E+M S
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR----- 483
            G+ P  + ++ VL    +    E A  L+  M   GC   D + + ++    AR     
Sbjct: 424 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT-DDALIYNLVVEGMARASKHN 482

Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           K   +LE + ++ D   N +   +  +V  + +   R +DA +++++M++R
Sbjct: 483 KALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ-VGRTDDAKQLLHKMSER 532



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 158/369 (42%), Gaps = 4/369 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P+V  +N+++  + +AK+ E A  L+  MR+ G APD  TY++LI    K    
Sbjct: 281 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 340

Query: 71  DSAISWLQQMEQDRVSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    Q + +  VS  + V YS L      L   + A  IFS L   G  PDL  Y +
Sbjct: 341 DEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTS 400

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  + K     E   L+EEM  +G  P   + S +L    E +    A+ +F  M    
Sbjct: 401 LILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 460

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSM---RKMGIDPSVVSYNTLLRVYGEAELFG 246
           C  D    N++++   +      A  +   +   R    +PS  + + L+    +     
Sbjct: 461 CTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTD 520

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  L   M  +     V +YN ++    +    ++AT + + M + G  P   T + +I
Sbjct: 521 DAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 580

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           +    A K+D A  L Q++   G   D     T+I  Y + G    A++LL E+ +    
Sbjct: 581 SWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE 640

Query: 367 PRETAITIL 375
           P +T   +L
Sbjct: 641 PNDTTHDLL 649



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 48/390 (12%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            +P+   Y  +I  F  A     A  L+EEM+  G + + V ++TL+    +  + VEAL
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             F  M + +C  D+ T   ++    +     +A  +   M   G  P  V+++TL+   
Sbjct: 65  EHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 240 GEAELFGEAIHLFRLM----QR-----------------------------------KEI 260
            +   FG     FR++    QR                                   K  
Sbjct: 124 CK---FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              V+ +N +I  + K+ + + A  L++ M  +G  PN  T++ +I    KA ++  A  
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILA 376
           L +K+ + G   + V Y T+I    + G V  A  L   + +    PN +     I  L 
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 300

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +A RIEEA  ++ +  + G   DI  +  +I+   ++ +     ++F+ +  +G    + 
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360

Query: 437 II-ALVLNSYGKLREFETADDLYSEMQEEG 465
           +  + + + Y  L     A  ++S + ++G
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKG 390



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 2/167 (1%)

Query: 1   RSVAILDWI--NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +++A+L+ +    + +++PS  A + ++ ++ +  + + A  L  +M +RG A    +Y+
Sbjct: 483 KALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYN 542

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
            L++   +   +D A    + M     + ++   + +I      +    A  +  R+   
Sbjct: 543 GLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL 602

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           G  PD+   NT+I  + K+     AR L+EEM E G++P+  ++  L
Sbjct: 603 GCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 221/471 (46%), Gaps = 12/471 (2%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LDW+N+ + +   P   +YN +L  +L+ +  + A  L  +M+ +G++P+++TY+ L+  
Sbjct: 233 LDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCG 292

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           + + G+   A   ++ M ++ +   +  Y+ L+          +A  I   ++   ++PD
Sbjct: 293 YCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPD 352

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V YNT+I+   + +   E   LIEEM ++GVK + V+Y+ +L    +     EA +   
Sbjct: 353 VVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M E     D  T N +I  Y +      A R+   M   G+     + NT+L      +
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEK 472

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA +L     ++    + V+Y  +I  Y K  + ++A NL  EM+ R I P+ ITY+
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHE 359
           ++I    ++ K+D+A     ++  +G+  D   Y  +I  +   G V  A      ++  
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           L +P+       +  L R G +E+A  +F      G+  D+  +  +I    +  K+ N 
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 420 IEVFEKMRSAGYFPDSH---IIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            ++  +M +    PD +   +I   L   G+++E   A++   +M E G V
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKE---AEEFTLKMVESGIV 700



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 208/458 (45%), Gaps = 7/458 (1%)

Query: 15  YSPSVFAYNVVLRNVLR---AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           Y P++   N ++ +++R   +    LA  +  +  + G+ P+  +++ LI  +  E    
Sbjct: 171 YRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVK 230

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+ W+ +M +     D V Y+ +++   K     +A  +   +KS G+ P+   YN ++
Sbjct: 231 DALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLV 290

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             + +  L KEA  +IE M    + P   +Y+ L+N +  + K  EA  +  EM ++N  
Sbjct: 291 CGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVL 350

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N +ID   Q   + +   L   M K G+  + V+YN +L+   +     EA   
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT 410

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M+   +  + VTYNT+I  Y K+ +  KA  +M EM ++G++ +  T +TI+     
Sbjct: 411 LDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCV 470

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             KLD A  L       G  +D V Y  +I+ Y +      A  L  E+++    P+TI 
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I  L ++ ++++A     +  + G V D + +  +I  F          +   +M 
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              + PD +   ++L    +    E A  L++ +  +G
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 188/412 (45%), Gaps = 43/412 (10%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINV---FGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           A  IF+++K     P+L+  NT++N    +  +     AR ++++  + GV P+T S++ 
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+  Y    K  +AL    +M+E  C  D  + N ++D   +  + ++A  L   M+  G
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK-------------------------- 258
           + P+  +YN L+  Y    L  EA  +  +M R                           
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 259 ----EIEQ-----NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
               E+E+     +VVTYNT+I    +  +  +  +L++EM  +G++ NA+TY+ I+   
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NT 365
            K G +  A     K+  +G+  D V Y T+I AY + G +  A R++ E+       +T
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               T +  L    +++EA  +   A   G + D   +G +I  + +++K    + ++++
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           M+     P +     V+    + R+ + A D  +EM E G V  D+  + ++
Sbjct: 519 MKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV-PDETTYNII 569



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 35/352 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++    + +     + L +EM ++G+  +  TY+ ++    K+G    A + 
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT 410

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +ME++ +S D V Y+ LI    K     KA  +   + S G+  D    NT+++    
Sbjct: 411 LDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCV 470

Query: 137 AKLFKEARLLI-----------------------------------EEMREQGVKPDTVS 161
            K   EA  L+                                   +EM+E+ + P T++
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++++    ++ K  +A+    EM E     D TT NI+I  +      + A +    M 
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           +    P V + N LLR      +  +A+ LF  +  K  + +VVTYNT+I    K  + E
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            A +L+ EM+ + + P+  TY  IIA    AG++  A     K+  SG+  D
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/424 (21%), Positives = 170/424 (40%), Gaps = 54/424 (12%)

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID------------- 202
           +P      T +  YV+  +   A  +F +M  +N   +L TCN +++             
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 203 -----------------------VYGQLDMAKDADRLFW--SMRKMGIDPSVVSYNTLLR 237
                                  +YG    +K  D L W   M + G  P  VSYNT+L 
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
              +  L  EA  L   M+ K +  N  TYN ++  Y +    ++AT +++ M    + P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
              TY+ ++  +   GK+D A  +  ++    V  D V Y T+I    +    +    L+
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 358 HELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+ +     N +     +  + + G + EAT    +  + G   D   +  +I  + + 
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
            K      + ++M S G   D+  +  +L+     ++ + A +L     + G +  D+V 
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYIL-DEVS 495

Query: 474 FQMLSLYGARKD------FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
           + +L L G  KD       N+ + + ER    S I     + V+ G+ + + +++ A   
Sbjct: 496 YGILIL-GYFKDEKGDRALNLWDEMKERQIMPSTIT---YNSVIGGLCQ-SRKVDQAIDK 550

Query: 528 MNRM 531
           +N M
Sbjct: 551 LNEM 554



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V+  N++LR + R    E A  LF+ +  +G   D  TY+T+I+   KEG F+
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A   L +ME  ++  D   Y  +I          +A     ++  SGIV D        
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD-------- 702

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
                 KL K   +L  E+ E      +++YS  +N     HK+ +A+ +F E+ +
Sbjct: 703 ---QNLKLGKGQNVLTSEVSEH-FDFKSIAYSDQINELCNQHKYKDAMHLFVEVTK 754


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 207/429 (48%), Gaps = 43/429 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-RGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+   YNVV+  + +A+    A+ +  EMR  + +APD  TYST+I  F K+G  D A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M                                  +   G+ PD+V Y ++++  
Sbjct: 66  EILREM----------------------------------VTRDGMAPDVVTYTSVVDGL 91

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +      A  ++ EM+ +GV+PD  ++S L+  +    K  EAL ++ E+   +C LD 
Sbjct: 92  CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDA 151

Query: 195 TTCNIMIDVYGQLDMAKDADRLF--WSMRKMGI-DPSVVSYNTLLRVYGEAELFGEAIHL 251
            + + +I    +     +A  LF    MR+ G   P VV+Y  L+  + ++    +A+ +
Sbjct: 152 VSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM 211

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M+ ++   NVVTY++++    K+ + ++A +L + M ++G  PN +TY+T+I     
Sbjct: 212 LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA 271

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A K+D A +L  ++ ++    D V Y  ++  Y R+G +  AK+L  E+   + +P    
Sbjct: 272 AHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRIT 331

Query: 372 ITILAR----AGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKM 426
            T L R    A R+EEA ++      A  +  D+  +  ++  +SR K++    E  ++M
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391

Query: 427 RSAGYFPDS 435
            +    P++
Sbjct: 392 IARNVAPNA 400



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 46/414 (11%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQR---GIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + ++  + R ++   A+ LF EM  R      PD  TY+ LI  F K G  + A+  L  
Sbjct: 155 SALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 214

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME  +   ++V YS+L+    K  D  +A+ +F R+ S G VP++V Y T+I+    A  
Sbjct: 215 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 274

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
              ARLL++EM       DTVSY+ LL+ Y    +  EA  +F EM   +C  D  T   
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334

Query: 200 MIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++  +      ++A  L  +M+   GIDP VV+Y+ ++  Y  A+ F EA    + M  +
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394

Query: 259 EIEQNVVTYNTMIKIYGKS--LEH-----------------------------EKATNLM 287
            +  N VTY+++I    K+  + H                             E+A  L+
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLL 454

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +EM N+ +EP+  T++++I    + G +D A  L   + + G+E   V Y T++  + R 
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 514

Query: 348 GLVAHAKRLLHELRQ--------PNTIPRE---TAITILARAGRIEEATWVFRQ 390
           G +  A  L   +R+         N +P +     I  L +A  I++A  V  +
Sbjct: 515 GRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 568



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 179/388 (46%), Gaps = 16/388 (4%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + E  +  P+V  Y+ +L  + +A   + A  LF  M  +G  P+  TY+TLI       
Sbjct: 214 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 273

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D+A   + +M       D V Y+ L++   +L    +A  +F  + +   +PD + Y 
Sbjct: 274 KVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYT 333

Query: 129 TMINVFGKAKLFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            ++  F  A   +EAR L+E M+   G+ PD V+YS ++  Y    +FVEA     EM  
Sbjct: 334 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 393

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            N   +  T + +ID   +      A  +  ++ K    P VV+Y  ++      +   E
Sbjct: 394 RNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEE 449

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ L   M  K +E +V T+N++I    +  + ++A  L+  M   G+EP  +TY+T++ 
Sbjct: 450 ALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 509

Query: 308 IWGKAGKLDRAAMLFQKLR------SSGVEIDP-VLYQTMIVAYERVGLVAHAKRLLHEL 360
            + + G+++ A  LF+ +R      SS   + P   +  +I    +   +  A  ++ EL
Sbjct: 510 GFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 569

Query: 361 RQPNTIPRE----TAITILARAGRIEEA 384
           R     P E      +  L RAGR EEA
Sbjct: 570 RSRECEPAEEDCLAIVDGLLRAGRTEEA 597



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 209/473 (44%), Gaps = 19/473 (4%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR-GIAPDRYTYSTLITC 63
           +L  + +    +P +  Y+ V+    +  + + A  +  EM  R G+APD  TY++++  
Sbjct: 31  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDG 90

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             ++G  D A   +++M+   V  D   +S LI          +A+ ++  + +S    D
Sbjct: 91  LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLD 150

Query: 124 LVAYNTMINVFGKAKLFKEARLLIE--EMREQGV-KPDTVSYSTLLNLYVENHKFVEALS 180
            V+ + +I    + +   EA  L +  EMRE G  KPD V+Y+ L++ + ++    +A+ 
Sbjct: 151 AVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMK 210

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           +   M    C  ++ T + ++      G LD A D   LF  M   G  P+VV+Y TL+ 
Sbjct: 211 MLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD---LFRRMTSKGCVPNVVTYTTLIH 267

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
               A     A  L   M       + V+YN ++  Y +    E+A  L +EM  +   P
Sbjct: 268 GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP 327

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           + ITY+ ++  +  A +L+ A  L + +++ +G++ D V Y  ++  Y R      A   
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 387

Query: 357 LHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           + E+      PN +   + I  L +AGR+  A  V +      +  D+  +  +IE    
Sbjct: 388 IQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCG 443

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             +    + + E+M +    P       V+ +  +L + + A  L   M   G
Sbjct: 444 TDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/385 (20%), Positives = 163/385 (42%), Gaps = 51/385 (13%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFR-LM 255
           N++++   +  +   A  +   MR    + P +V+Y+T++  + +      A  + R ++
Sbjct: 13  NVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMV 72

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            R  +  +VVTY +++    +  + ++A  +++EM+ +G+EP+  T+S +I  W  A K+
Sbjct: 73  TRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKV 132

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------------- 362
           D A  L++++ +S   +D V    +I    R   +  A  L  E+               
Sbjct: 133 DEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTY 192

Query: 363 -----------------------------PNTIPRETAITILARAGRIEEATWVFRQAFD 393
                                        PN +   + +  L +AG +++A  +FR+   
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G V ++  +  +I       K      + ++M +     D+     +L+ Y +L   E 
Sbjct: 253 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEE 312

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES--LFERLDSDSNINKKELHH-- 509
           A  L+ EM  + C   D++ +  L + G      + E+  L E + + + I+   + +  
Sbjct: 313 AKQLFKEMAAKSC-LPDRITYTCL-VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
           VVAG Y RA R  +A+  +  M  R
Sbjct: 371 VVAG-YSRAKRFVEAAEFIQEMIAR 394



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 128/285 (44%), Gaps = 9/285 (3%)

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN-RGIEPNAITYSTIIAIWGKAGKL 315
           R+ +  N  TYN ++    K+    KA  +++EM++ + + P+ +TYST+I  + K G++
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 316 DRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           DRA  + +++ +  G+  D V Y +++    R G +  A  ++ E++    +P+      
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM---R 427
            IT    A +++EA  ++++   +    D      +I    R ++     E+F++M    
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
              + PD      +++ + K    E A  +   M+   CV +   +  +L       D +
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
               LF R+ S   +     +  +      A++++ A  +M+ M 
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L+ +   A   P V  Y++V+    RAK++  A     EM  R +AP+  TYS+LI   
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  + A+  L+ +++     D+V Y+ +IE         +A+++   + +  + P +
Sbjct: 411 CKAGRVNHAMEVLKNVDKP----DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             +N++I    +     EA  L+  M   G++P  V+Y+TLL  +    +   A  +F  
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526

Query: 185 M 185
           M
Sbjct: 527 M 527


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N +++ + RA Q   A  + +EM   G+APD  T++TL+  F +EG   +A+  
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +   S   V  + LI    KL     A+    +  ++G  PD + YNT +N   +
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  +++ M ++G  PD  +Y+ ++N   +N +  EA  +  +M E  C  D+TT
Sbjct: 303 NGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362

Query: 197 --------C---------------------------NIMIDVYGQLDMAKDADRLFWSMR 221
                   C                           NI+I+   ++   + A RLF  M+
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YNTL+         G+A+ L + M+     ++ VTYNT+I    K +  E
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M  +GI  NAIT++T+I    K  ++D A  L  ++ S G++ + + Y +++
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +  A  +L  +     + + +   T I  L +AGR + A  + R     G  
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR 602

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +I+   R     + + +F +M   G  PD+    +V        G +RE   
Sbjct: 603 ATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIRE--- 659

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM ++G +  FS    F+ML+
Sbjct: 660 AFDFLLEMVDKGFIPEFS---SFRMLA 683



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 230/493 (46%), Gaps = 7/493 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++P    Y  ++R +  A    +L   L  EMR+ G         + +  + ++ +F  A
Sbjct: 73  FAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDA 132

Query: 74  ISW-LQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +   L Q++    +  D V+Y++L+ +  + S      +++S +   GI PD+V +NT++
Sbjct: 133 VDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLM 192

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +A   + A L++EEM   GV PD  +++TL+  +VE      AL V A M E+ C 
Sbjct: 193 KALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCS 252

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T N++I+ Y +L   +DA          G +P  ++YNT +    +    G A+ +
Sbjct: 253 PTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKV 312

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M ++  + +V TYN ++    K+ + E+A  ++ +M  RG  P+  T++T+I     
Sbjct: 313 MDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCS 372

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-- 369
             +L+ A  L +++   G+  D   +  +I A  +VG    A RL  E++     P E  
Sbjct: 373 GNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVT 432

Query: 370 --TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L   G++ +A  + ++   AG  +    +  +I+   +  +     EVF++M 
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G   ++     +++   K +  + A+ L S+M  EG   ++  +  +L+ Y  + D  
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552

Query: 488 MLESLFERLDSDS 500
               + + + ++ 
Sbjct: 553 KAADILQTMTANG 565



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 204/459 (44%), Gaps = 15/459 (3%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+ ++ C
Sbjct: 275 LGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  + A   L QM +     D+  ++ LI      +   +A+ +  ++   G+ PD
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K    + A  L EEM+  G  PD V+Y+TL++      K  +AL +  
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+    + +
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N +TYN+++  Y K  + +KA +++Q M   G E + +TY 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  L + +R  G+   P  Y  +I +  R      A  L  E+ + 
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIEL---FSRNKK 415
              P      I+ R      G I EA     +  D G + + S F  + E       +  
Sbjct: 635 GEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY 694

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           +   IE+  +    G   DS + A  +  Y K+R+F  A
Sbjct: 695 FIRAIEIIIEKADLG---DSDVSA--IRGYLKIRKFYDA 728


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 212/479 (44%), Gaps = 28/479 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PSV+  N++L ++++ K+ EL   LF EM  +GI P+  T++ LI     EG    A 
Sbjct: 194 FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 253

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L+QME++     +V Y+ L+    K   Y  AI +   +   GI  D+  YN  I+  
Sbjct: 254 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 313

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  +A LL+++MR++ + P+ V+Y+TL+N +V+  K   A  VF EM++ +   + 
Sbjct: 314 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC 373

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGI-----------------------DPSVVS 231
            T N +I  +  +   ++A RL   M   G+                            +
Sbjct: 374 VTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFT 433

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
            N L+         GEA      M R  +  N +TY+ +I  YG   +   A +   +M 
Sbjct: 434 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 493

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             G  P+  TY +++    K G L  A     +L      +D V+Y T++    + G + 
Sbjct: 494 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 553

Query: 352 HAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCM 406
            A  L  ++ Q N +P      + +T L R G+   A  +F  A   G +  +  ++ C+
Sbjct: 554 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 613

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++  S+          FE+M   G  PD+     +++S  +  +   A+D +S M+  G
Sbjct: 614 VDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 672



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 201/474 (42%), Gaps = 18/474 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE  + P++  YN +L    +  +++ A  L D M  +GI  D  TY+  I         
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRS 319

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L++M ++ +S + V Y+ LI    K      A  +F+ +    + P+ V YN +
Sbjct: 320 AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I        F+EA  L++ M   G++         LN   E+    EA+ V+A MN    
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLR---------LN---EHGNVTEAMKVYAVMNCNGH 427

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  TCN+++    +     +A++    M ++G+ P+ ++Y+ ++  YG       A  
Sbjct: 428 GADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFS 487

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            F  M +     +  TY +++K   K     +A   +  +       +++ Y+T++A   
Sbjct: 488 FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 547

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNT 365
           K+G L  A  LF K+  + V  D   Y +++    R G    A  L           PN 
Sbjct: 548 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 607

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     +  L++AG  + A + F +    G   D   F  +I+  SR  +     + F  
Sbjct: 608 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 667

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           MR  G  P+     ++L+ + K +       LYS M  EG +F D++ F  L L
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG-IFPDKLTFHSLIL 720



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/467 (21%), Positives = 183/467 (39%), Gaps = 54/467 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS F Y  +L+ + +      A    + +     A D   Y+TL+    K G    A++ 
Sbjct: 499 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 558

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNTMINVFG 135
             +M Q+ V  D   YS+L+    +      A+ +F      G + P+ V Y  +++   
Sbjct: 559 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 618

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   K A    EEM ++G  PDTV++                                 
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAF--------------------------------- 645

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +ID   +      A+  F +MR  G+ P++ +YN LL  + + +     + L+  M
Sbjct: 646 --NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 703

Query: 256 QRKEIEQNVVTYNTMI-------------KIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            R+ I  + +T++++I             K+ GK +  E++T ++ EM   G+ P    Y
Sbjct: 704 MREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM-EESTVVLHEMLENGVIPKHAQY 762

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            T+I    + G +  A  L  ++ + G     V    M+      G    A  +L  + +
Sbjct: 763 ITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 822

Query: 363 PNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              +P     T L     R  +I EA  +       G   D+  +  +I     N   A 
Sbjct: 823 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 882

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             E++E+MR     P+    A+++++          + L +++QE G
Sbjct: 883 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 929



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 12/326 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++  + +A   + A   F+EM ++G  PD   ++ +I    + G    A  +
Sbjct: 605 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 664

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M    V  +L  Y+ L+    K     + +S++S +   GI PD + ++++I    K
Sbjct: 665 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 724

Query: 137 AKL------------FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + +             +E+ +++ EM E GV P    Y TL+N          A  +  E
Sbjct: 725 SGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 784

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M  +         + M+         +DA  +   M +M + P++ ++ TL+  +     
Sbjct: 785 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 844

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA+ L  +M+   ++ +VV YN +I     + +   A  L +EM++R + PN  TY+ 
Sbjct: 845 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 904

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGV 330
           ++     A  L +   L   L+  G+
Sbjct: 905 LVDAISAANNLIQGEKLLTDLQERGL 930


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 252/548 (45%), Gaps = 33/548 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-RGIAPDRYTYSTLITCFGKEG------ 68
           SP+V  ++ +++ +  A +   A  +++ M    GI+P+R+TY+ L+    K G      
Sbjct: 378 SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLE 437

Query: 69  -MFD--------SAISW-LQQMEQD-----RVSGDLVLYSNLIELARKLSDYSKAISIFS 113
             F+        S+ SW +   E D          LV Y+ L+    K      A+ +  
Sbjct: 438 QCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
            +  SG+ PD++ +N++++   K +   +A  + +   E+G +P+ V+YSTL++   +  
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           K  EAL + A+M E+ C  +  T + ++D   ++   +DA  +   MR  G  P  V+YN
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TL+  + + +   EA+ L R M       +VVTY T+     +S   ++A  ++  M  R
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAH 352
           G  PNAITYS+I+    KAG++  A   F+K+ R   V    + Y  +I    + G +  
Sbjct: 678 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737

Query: 353 A----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A    +R++   R P+ +     I  L  AGRI+    +F    + G   DI  +  MI 
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            +    +++    + E+M++ G   ++    +V+ +       + A   +  + E+    
Sbjct: 798 AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED---C 854

Query: 469 SDQVHFQML--SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
            D++ +  L  SL  +R+    LE L   +    + +      V+ G++ +A     A++
Sbjct: 855 RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF-KAGSPEVAAK 913

Query: 527 IMNRMNKR 534
           ++  M  R
Sbjct: 914 LLQEMRSR 921



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 226/522 (43%), Gaps = 42/522 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP V  +N VL  + + ++   AH +F    +RG  P+  TYSTLI    K    D
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 560

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L +M +     + V YS +++   K+     A+ +  +++ +G +PD V YNT+I
Sbjct: 561 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F K +  +EA  L+ EM E G  P  V+Y+TL +    + +F EA+ +   M    C 
Sbjct: 621 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 680

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                              P+ ++Y++++    +A    EA+  
Sbjct: 681 -----------------------------------PNAITYSSIVDGLCKAGRVTEALGY 705

Query: 252 FRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           F  M R E +  +V+ Y+ +I    K+   ++A   ++ M   G  P+ +T+S +I    
Sbjct: 706 FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
            AG++D    LF  +   G + D   Y  MI AY   G  + A  LL E++      NT+
Sbjct: 766 DAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTV 825

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L    RI+EA   F    +  + +D   +  +I     +++    +E+   M
Sbjct: 826 THGIVIKALCGNDRIDEAVSYFHSIPE--DCRDEISYNTLITSLVASRRSEQALELLRAM 883

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
            + G  PD+     V++   K    E A  L  EM+  G     + +  M+S     K  
Sbjct: 884 VADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
            +    FE +   +      ++  +   + +A++++DA +++
Sbjct: 944 PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 223/485 (45%), Gaps = 28/485 (5%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-RGIAPDRYTYSTLITCFGKE 67
           + +E+  S  V  YN++L+ + + ++   A+   + MR+  G +P+  T+STLI      
Sbjct: 335 VMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNA 394

Query: 68  GMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-----KSSG-- 119
           G  + A    ++M   + +S +   Y+ L+E   K  D  +    F ++     +SS   
Sbjct: 395 GRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSW 454

Query: 120 --------------IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
                           P LV YNT++    K+ + ++A  L+E M E G+ PD ++++++
Sbjct: 455 PIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSV 514

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L+   +  + ++A +VF    E  C  ++ T + +ID   ++    +A +L   M ++G 
Sbjct: 515 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 574

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
             + V+Y+T++    +     +A+ + R M+      + VTYNT+I  + K     +A  
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L++EM   G  P+ +TY+T+     ++G+ D A  +   + + G   + + Y +++    
Sbjct: 635 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694

Query: 346 RVGLVAHA-----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           + G V  A     K    E+  P+ I     I  L +AGRI+EA     +   AG + D+
Sbjct: 695 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             F  +I       +    +E+F  M   G   D +    ++N+Y    EF  A  L  E
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814

Query: 461 MQEEG 465
           M+  G
Sbjct: 815 MKTHG 819



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 207/456 (45%), Gaps = 10/456 (2%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A   P    YN ++    + ++   A GL  EM + G  P   TY+TL     + G FD
Sbjct: 606  DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV-PDLVAYNTM 130
             A+  L  M     + + + YS++++   K    ++A+  F ++    +V P ++AY+ +
Sbjct: 666  EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I+   KA    EA   +E M   G  PD V++S L+N   +  +    L +F  M E  C
Sbjct: 726  IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGC 785

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              D+   N MI+ Y        A  L   M+  GI  + V++  +++     +   EA+ 
Sbjct: 786  KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVS 845

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
             F  +   E  ++ ++YNT+I     S   E+A  L++ M   G  P+A  Y T++    
Sbjct: 846  YFHSI--PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTI 366
            KAG  + AA L Q++RS G   D   Y  MI    +   +  A    + +L +  +P+ I
Sbjct: 904  KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963

Query: 367  PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
               + I    +A ++++A  + R +   G    I+++  M++   +N+     +EV  +M
Sbjct: 964  VYSSLIDAFCKADKVDDAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020

Query: 427  RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            +S    P  HI   +  +Y      + A  L +++Q
Sbjct: 1021 KSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 224/528 (42%), Gaps = 68/528 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP+VF + + +  + +A     A+  FD M Q G++P+  TY  LI    K G  D
Sbjct: 204 ESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLD 263

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L+  +++  +G +  +S+L+    +     +AI +   LK+   VP++V +N+++
Sbjct: 264 IALGLLR--DKNSQAG-MFAFSSLLHGLCQAHRLEEAIQL---LKAMPCVPNVVCFNSLM 317

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NC 190
           N   +A+   EA  L + M+E G   D ++Y+ LL    +  +  EA      M     C
Sbjct: 318 NGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGC 377

Query: 191 PLDLTT--------CNI------------MIDVYG-------------QLDMAKDADRL- 216
             ++ T        CN             M+ V G              L  A D+ RL 
Sbjct: 378 SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLE 437

Query: 217 ---------------FWSMRKMGID--------PSVVSYNTLLRVYGEAELFGEAIHLFR 253
                           W +    +D        P++V+YNTL+    ++ +  +A+ L  
Sbjct: 438 QCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    +  +V+T+N+++    K      A N+ +    RG  PN +TYST+I    K  
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           K+D A  L  K+   G   + V Y T++    +VG +  A  +L ++R     P+ +   
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    +  R+ EA  + R+  +AG    +  +  +     R+ ++   +E+ + M + 
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G  P++   + +++   K      A   + +M  +  V    + +  L
Sbjct: 678 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 173/381 (45%), Gaps = 11/381 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  Y+ V+  + R  + +    L +EM  RG AP+  TY+TL+     +G    A 
Sbjct: 32  FRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAF 91

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L++M  +    +L+ +  +I+   K  +   A  +   +   G VPD+  +  +++  
Sbjct: 92  SLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHAL 151

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +     EA    +++   G  PD V+Y+T+++   +  +   A  V   + E      +
Sbjct: 152 CELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTV 211

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I +D   +      A   F SM + G+ P+ V+Y+ L+    +A     A+ L R 
Sbjct: 212 FTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR- 270

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
              K  +  +  +++++    ++   E+A  L++ M      PN + +++++    +A +
Sbjct: 271 --DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARR 325

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRE 369
           +D A  LF  ++ SG   D + Y  ++    ++  +  A R +  +R+     PN +   
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 370 TAITILARAGRIEEATWVFRQ 390
           T I  L  AGR+ +A  V+ +
Sbjct: 386 TLIQGLCNAGRVNQAWEVYER 406



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 159/380 (41%), Gaps = 5/380 (1%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ LI    K      A + F +    G  P +V Y+T+I+   +     +   L+E
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM  +G  P+ V+Y+TL+N  +   +  EA S+   M    CP +L T  ++I    +  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             + A R+   M   G  P V  +  LL    E     EA   F+ +       + VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           TM+    K+   E A  ++Q +      P   T++  +    KAG L  A   F  +  +
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWV 387
           GV  + V Y  +I    + G +  A  LL +   Q       + +  L +A R+EEA  +
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            +       V ++  F  ++    + ++     E+F+ M+ +G   D     ++L    K
Sbjct: 301 LKA---MPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357

Query: 448 LREFETADDLYSEMQE-EGC 466
           LR    A      M+  EGC
Sbjct: 358 LRRIPEAYRHVELMRRTEGC 377



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/445 (21%), Positives = 181/445 (40%), Gaps = 8/445 (1%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TY+ LI    K G    A +  ++  Q      +V YS +I+   + ++  K   +   +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
              G  P+ V YNT++N        KEA  L+E M   G  P+ +++  ++    +  + 
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             A  V  EM +     D+    +++    +L    +A   F  +  +G  P  V+YNT+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +A     A  + +L+        V T+   +    K+     A      M   G+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            PN +TY  +I    KAGKLD A  L   LR    +     + +++    +   +  A +
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 356 LLHELRQ-PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           LL  +   PN +   + +  L +A R++EA  +F    ++G   D+  +  +++   + +
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 415 KYANVIEVFEKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           +        E M R+ G  P+    + ++           A ++Y  M     +  ++  
Sbjct: 360 RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFT 419

Query: 474 FQMLSLYGARK--DFNMLESLFERL 496
           +  L L G  K  D   LE  FE++
Sbjct: 420 YAFL-LEGLCKAGDSRRLEQCFEQM 443


>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 173/337 (51%), Gaps = 1/337 (0%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L+WI  +         YNV ++++   KQ+ L   L  +M   G+  D  TYST+I+C  
Sbjct: 176 LNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEELAHQMIDNGVPLDNITYSTIISCAK 235

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K  ++D A+ W ++M +  +  D V YS ++++  +L    + IS++ R +++G  PD +
Sbjct: 236 KCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPI 295

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            ++ +  +FG+A  +   R + +EM   GV+P+ V Y+TLL    +  K V A  +F EM
Sbjct: 296 TFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEM 355

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E+    +  T   +I +YG+   ++DA  L+  M++ G     + YNTLL +  +  L 
Sbjct: 356 IELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 415

Query: 246 GEAIHLFRLM-QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            EA  LFR M Q    + +  +Y  M+ IYG   + +KA  L  EM   G+E N + ++ 
Sbjct: 416 EEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFTC 475

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +I   G+A + D    +F      G++ D  L   ++
Sbjct: 476 LIQCLGRATEFDDLVRVFGISVERGIKPDDRLCGCLL 512



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N + +   L  + K     + +++  ++P + + YN  +      K F     L  +M +
Sbjct: 158 NALLILNTLKPWQKTNLFLNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEELAHQMID 217

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            GV  D ++YST+++   + + + +A+  F  M + +   D  T + ++DVY +L   ++
Sbjct: 218 NGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEE 277

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              L+   R  G  P  ++++ L +++GEA  +    ++F+ M+   ++ N+V YNT+++
Sbjct: 278 VISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLE 337

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             GK+ +   A  L +EM   GI PN  T + +I I+GKA     A  L+Q+++ +G  +
Sbjct: 338 AMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPM 397

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D +LY T++     VGLV  A+ L  +++Q     P++      + I    G +++A  +
Sbjct: 398 DFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKL 457

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           F +   +G   ++  F C+I+   R  ++ +++ VF      G  PD  +   +L+
Sbjct: 458 FNEMCKSGVELNVMGFTCLIQCLGRATEFDDLVRVFGISVERGIKPDDRLCGCLLS 513



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 135/275 (49%), Gaps = 5/275 (1%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G+    ++Y+T++    +  L+ +A+H F  M +  +  + VTY+ ++ +Y +  + E+ 
Sbjct: 219 GVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEEV 278

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +L +  +  G +P+ IT+S +  ++G+AG  D    +FQ++ S GV+ + V+Y T++ A
Sbjct: 279 ISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEA 338

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAIT----ILARAGRIEEATWVFRQAFDAGEVKD 399
             + G    A+ L  E+ +   +P E  +T    I  +A    +A  ++++  + G   D
Sbjct: 339 MGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMD 398

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLY 458
             ++  ++ + +          +F  M+ + +  PDS     +LN YG   + + A  L+
Sbjct: 399 FILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLF 458

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           +EM + G   +      ++   G   +F+ L  +F
Sbjct: 459 NEMCKSGVELNVMGFTCLIQCLGRATEFDDLVRVF 493



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 3/223 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P++  YN +L  + +A +   A GLF+EM + GI P+  T + +I  +GK    
Sbjct: 321 ESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWS 380

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNT 129
             A+   Q+M+++    D +LY+ L+ +   +    +A ++F  +K S    PD  +Y  
Sbjct: 381 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTA 440

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M+N++G      +A  L  EM + GV+ + + ++ L+       +F + + VF    E  
Sbjct: 441 MLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFTCLIQCLGRATEFDDLVRVFGISVERG 500

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
              D   C  ++ V      + D +++   +++   +P +V++
Sbjct: 501 IKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQRA--NPKLVAF 541



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 10/282 (3%)

Query: 262 QNVVTYNTMI-KIYGKSLEHEKATNLMQE----MQNRGIEPNAITYSTIIAIWGKAGKLD 316
           QN++   T+   +  KSL   K   L++E    M + G+  + ITYSTII+   K    D
Sbjct: 182 QNLLPMETIFYNVTMKSLRFGKQFGLIEELAHQMIDNGVPLDNITYSTIISCAKKCNLYD 241

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A   F+++  + +  D V Y  ++  Y R+G V     L    R     P     ++L 
Sbjct: 242 KAVHWFERMYKTSLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLG 301

Query: 377 R----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +    AG  +   +VF++    G   ++ V+  ++E   +  K      +FE+M   G  
Sbjct: 302 KMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIV 361

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+   +  V+  YGK R    A +L+  M+E G      ++  +L++          E+L
Sbjct: 362 PNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 421

Query: 493 FERLDSDSNINKKELHHV-VAGIYERANRLNDASRIMNRMNK 533
           F  +   ++       +  +  IY     ++ A ++ N M K
Sbjct: 422 FRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMCK 463


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 239/529 (45%), Gaps = 17/529 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG----IAPDRYTYSTLITCFGKEGMFDS 72
           PS +A N +L  +++ ++ E AH L+DEM  R     I  D YT S ++     +G  + 
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            I  ++         ++V Y+ LI+   K  +   A  +F +LK  G +P L  + +++N
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  +F+   LL+ EM+++G+  +   Y+ +++   +    ++A     EM+E  C  
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           DL T N +I+ +      ++A++L     + G+ P+ ++Y  L+  Y +   + +A    
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M    +E ++++Y  +I     + E + A  +   M NRGI P+A  Y+ ++    K 
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           GKL  A ++  ++    +  D  +Y T++  + R G +  AK+L   + +    P  +  
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGY 526

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I   +++G ++ A     +   A  V DI  F  +I+ + +      V+++F  M  
Sbjct: 527 NVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
               P+      ++N Y +  E + A+ L+S M+  G   S   +  ++  +        
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGK 646

Query: 489 LESLFE-RLDSDSNINKKELHHVVAG--------IYERANRLNDASRIM 528
             S FE  L +    N    H++V G        +    N L++ SR M
Sbjct: 647 AVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSM 695



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 202/427 (47%), Gaps = 20/427 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  YN ++ +     + E A  L ++  +RG+AP++ TY+ L+  + K+G +  A  +
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN-VFG 135
           L +M    +  D++ Y  LI       +   A++I  R+ + GI+PD   YN ++N +F 
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFK 465

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K KL   A++++ EM +Q + PD   Y+TL++ ++ +    EA  +F  + E      + 
Sbjct: 466 KGKL-SMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N+MI  + +  M  +A      MR+    P + +++T++  Y +       + +F LM
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM 584

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++  + NVVTY ++I  Y +  E + A  L   M++ G++P+ +TYS +I  + K  KL
Sbjct: 585 VKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKL 644

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A   F+ +  +    +   +  ++  +      A +       R+PN +  E + ++ 
Sbjct: 645 GKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVS-------REPNNL-HENSRSMF 696

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
                       F +    G  +  + + C++    + +     +++  KM + G   D+
Sbjct: 697 ED---------FFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDA 747

Query: 436 -HIIALV 441
              +AL+
Sbjct: 748 VSFVALI 754



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 224/514 (43%), Gaps = 54/514 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN ++    +  + E A+ LF +++ +G  P   T+ +L+  F K GMF++    
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M+   +S ++ +Y+N+I+   KL    KA      +  +   PDLV YNT+IN F  
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L+E+   +G+ P+ ++Y+ L++ Y +  ++ +A     EM+     +D+ +
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 197 CNIMID---VYGQLDMA-------------KDAD-------RLF----WSMRKM------ 223
              +I    V G++D A              DA+        LF     SM K+      
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 224 --GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
              I P    Y TL+  +       EA  LF+L+  K ++  VV YN MIK + KS   +
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A   + +M+     P+  T+STII  + K   ++    +F  +     + + V Y ++I
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y R G    A++L   +R    +P+ +     I    +  ++ +A   F         
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCT 660

Query: 398 KDISVFGCMIELFSRNKKYA------NVIE--------VFEKMRSAGYFPDSHIIALVLN 443
            + + F  ++  F+  K  A      N+ E         F +M   G+   +     +L 
Sbjct: 661 PNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILI 720

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              + R  +TA  L ++M   G + SD V F  L
Sbjct: 721 CLCQQRMVKTALQLRNKMLAFG-LCSDAVSFVAL 753



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 219/504 (43%), Gaps = 50/504 (9%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS----------GDLVL 91
            +EM+ +   P R   S ++  +   G+ D A+     + +   S           +L++
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 92  YSNLIELARKLSD---------------YS-----KAISIFSRLKSS----------GIV 121
               IE A +L D               Y+     K + +  R++            G V
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YNT+I+ + K    + A  L ++++ +G  P   ++ +L+N + +   F     +
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY-- 239
             EM +    +++   N +ID   +L     A      M +   +P +V+YNTL+  +  
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 240 -GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
            GE E   EA  L     R+ +  N +TY  ++  Y K  E+ KAT+ + EM   G+E +
Sbjct: 361 RGEVE---EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            I+Y  +I     AG++D A  +  ++ + G+  D  +Y  ++    + G ++ AK +L 
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+   N  P      T +    R G ++EA  +F+   + G    +  +  MI+ FS++ 
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              N I   +KMR A + PD    + +++ Y K         ++  M ++ C  +   + 
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597

Query: 475 QMLSLYGARKDFNMLESLFERLDS 498
            +++ Y  + +  M E LF  + S
Sbjct: 598 SLINGYCRKGETKMAEKLFSMMRS 621



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P V  YNV+++   ++   + A    D+MR+    PD +T+ST+I  + K+   +
Sbjct: 516 EKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMN 575

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           + +     M +     ++V Y++LI    +  +   A  +FS ++S G+ P +V Y+ +I
Sbjct: 576 AVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
             F K     +A    E M      P+  ++  L+N
Sbjct: 636 GSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 14/165 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  ++    R  + ++A  LF  MR  G+ P   TYS LI  F KE     A+S+
Sbjct: 591 PNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSY 650

Query: 77  LQQMEQDRVSGDLVLYSNLIE---------LARK---LSDYSKAI--SIFSRLKSSGIVP 122
            + M  ++ + +   +  L+          ++R+   L + S+++    FSR+   G   
Sbjct: 651 FELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQ 710

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
              AYN ++    + ++ K A  L  +M   G+  D VS+  L++
Sbjct: 711 KAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIH 755


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 218/474 (45%), Gaps = 6/474 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN ++  + RA + + A  + D M++ G+ P+  TY+  I  + +    D A S  +
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +  V  D+V  S L+    K   +S+A ++F  ++  G  P+ V Y  +I+   KA+
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              E+  L+ E+  +GV  D + Y+ L++   +  K  EA  +F      N   +  T  
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++ID   +      A+++   M +  I P+VV++++++    +    G+A    R M+ +
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I+ NVVTY T+I    K L  E A ++  EM   G+E N     +++    K GK+++A
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITI 374
             LF+++   GV +D V Y T+I    + G +  A ++  EL + N +P        I  
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINC 568

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   G+ +EA     +    G   D   +  MI   SR  K A  +++   M+ +   P+
Sbjct: 569 LCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY--GARKDF 486
               + ++    +    E A  L +EM   G   +   H ++L     G R D 
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDL 682



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 211/465 (45%), Gaps = 6/465 (1%)

Query: 7   DWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           D++ E  E    P+V  Y  V+    +    E A  ++ EM   G+  +++   +L+   
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  + A +  ++M +  V  D V Y+ LI+   K  +   A  +   L    ++PD 
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN  IN        KEA   +EEM+  G+KPD V+Y+T++       K  +AL +   
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M   +   +L T + +I    +    + A  L   M   G  P+ +++  +L+   +   
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
               + +   M    +  ++  YNT++++   +    KA  +++EM  RGI P+ IT++ 
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           +I    K+G LD A   + ++   G+  +   + T++   E  G +  +  +L+E++   
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P+ +  +  +T   +     EA  ++ +    G +  +S +  +I  FS+    +   
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           E+F +M++ G  P S    ++++ + KLR          +M+E+G
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/481 (22%), Positives = 220/481 (45%), Gaps = 19/481 (3%)

Query: 4   AILDWINEEAR---------------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR 48
           A++DW+ +E +               ++P+   Y V++  + +A   + A  +  EM ++
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
            I+P+  T+S++I    K G    A  ++++M++  +  ++V Y  +I+ + K      A
Sbjct: 414 SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAA 473

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           + ++  +   G+  +    ++++N   K    ++A  L  EM E+GV  D V+Y+TL++ 
Sbjct: 474 LDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDG 533

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             +      A  V  E+ E N   D    N+ I+    L  +K+A+     M+  G+ P 
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V+YNT++          +A+ L   M+R  I+ N++TY+T+I    ++   EKA  L+ 
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM + G  P ++T+  ++    +  + D    + + + ++G+  D  +Y T++      G
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNG 713

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +   A  +L E+      P+TI     I    ++G ++ A   + Q    G   +++ F 
Sbjct: 714 MTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFN 773

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++       +      V  +M+  G  P +    +++  YGK      A  LY EM  +
Sbjct: 774 TLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGK 833

Query: 465 G 465
           G
Sbjct: 834 G 834



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 215/463 (46%), Gaps = 12/463 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+   +P+   Y +++  + +A++   +  L  E+  RG+  D   Y+ L+    KEG  
Sbjct: 306 EKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKI 365

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    +    D  + + V Y+ LI+   K  +   A  + S ++   I P++V ++++
Sbjct: 366 DEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSI 425

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   K     +A   + EM+E+G+ P+ V+Y T+++   +      AL V+ EM     
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            ++    + +++   +    + A+ LF  M + G+    V+Y TL+    +      A  
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK 545

Query: 251 LFRLMQRKEIEQNVVTYNTMIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           + + +  K +  + V YN  I    + GKS E E   + ++EMQ+ G++P+ +TY+T+IA
Sbjct: 546 VGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAE---SFLEEMQSTGLKPDQVTYNTMIA 602

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              + GK  +A  L   ++ S ++ + + Y T+IV     G V  AK LL+E+      P
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
            ++     +   ++  R +    +     +AG   DI+V+  ++ +   N      + V 
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVL 722

Query: 424 EKMRSAGYFPDSHII-ALVLNSYGKLREFETADDLYSEMQEEG 465
           E+M   G  PD+    AL+L  + K    + A   Y +M   G
Sbjct: 723 EEMSGRGIAPDTITFNALILGHF-KSGHLDNAFSTYDQMLYHG 764



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 242/534 (45%), Gaps = 14/534 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   + ++  + +  ++  A+ LF EM + G AP+  TY  LI    K    + ++S 
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++    V  DL++Y+ L++   K     +A  +F    S    P+ V Y  +I+   K
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A  ++ EM E+ + P+ V++S+++N  V+     +A     EM E     ++ T
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +ID   +    + A  ++  M   G++ +    ++L+    +     +A  LFR M 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  + V Y T+I    K+     A  + QE+  + + P+A+ Y+  I      GK  
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A    ++++S+G++ D V Y TMI A  R G  A A +LL+ ++    +PN I   T I
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L  AG +E+A ++  +   +G          +++  S+ ++   ++E+ E M +AG  
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696

Query: 433 PDSHI---IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--N 487
            D  +   +  VL   G  R+   A  +  EM   G +  D + F  L L   +     N
Sbjct: 697 ADITVYNTLVRVLCYNGMTRK---AMVVLEEMSGRG-IAPDTITFNALILGHFKSGHLDN 752

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
              +  + L    + N    + ++ G+ E A R+ ++  ++N M KR    S+L
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGL-ESAGRIGESDMVLNEMKKRGIEPSNL 805



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 258/574 (44%), Gaps = 50/574 (8%)

Query: 14  RYSPSV--FAYNVVLRNVLRAKQWELA-HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           R S SV   +YNVV+     ++Q  LA   L  EM +RG+  D  T +T++    ++G  
Sbjct: 96  RSSESVDTVSYNVVMSGF--SEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRV 153

Query: 71  DSAISWLQQMEQDRVSG--DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           D A +  + M +    G  D+V +++L++   K+ D   A ++  R+K+ G+  D+V YN
Sbjct: 154 DRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYN 213

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           +++    +A     AR +++ M+  GV+P+ V+Y+  +  Y   +   +A S++ EM   
Sbjct: 214 SLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK 273

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE----- 243
               D+ T + ++    +     +A  LF  M K+G  P+ V+Y  L+    +A+     
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333

Query: 244 --LFGEAIH----------------------------LFRLMQRKEIEQNVVTYNTMIKI 273
             L GE +                             +FR         N VTY  +I  
Sbjct: 334 LSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             K+   + A  ++ EM+ + I PN +T+S+II    K G + +A    ++++  G++ +
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 334 PVLYQTMI-VAYERVGLVAHA---KRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
            V Y T+I  +++ +G  A       +L E  + N    ++ +  L + G+IE+A  +FR
Sbjct: 454 VVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFR 513

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  + G + D   +  +I+   +        +V +++      PD+ +  + +N    L 
Sbjct: 514 EMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLG 573

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR--KDFNMLESLFERLDSDSNINKKEL 507
           + + A+    EMQ  G +  DQV +  +    +R  K    L+ L     S    N    
Sbjct: 574 KSKEAESFLEEMQSTG-LKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
             ++ G++E A  +  A  ++N M+      +SL
Sbjct: 633 STLIVGLFE-AGAVEKAKYLLNEMSSSGFSPTSL 665



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 35/379 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YNV +  +    + + A    +EM+  G+ PD+ TY+T+I    +EG    A+  
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------------- 122
           L  M++  +  +L+ YS LI    +     KA  + + + SSG  P              
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 123 ---------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                D+  YNT++ V     + ++A +++EEM  +G+ PDT++
Sbjct: 677 GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++ L+  + ++     A S + +M       ++ T N ++          ++D +   M+
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K GI+PS ++Y+ L+  YG+     EA+ L+  M  K     V TYN +I  + K     
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMS 856

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L  EMQNRG+ P + TY  +++ W K           + ++  G         ++ 
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSIS 916

Query: 342 VAYERVGLVAHAKRLLHEL 360
            A+ + G+   A+RLL  L
Sbjct: 917 RAFSKPGMSWEARRLLKNL 935



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 96/208 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +N ++    ++   + A   +D+M   GI+P+  T++TL+      G    +  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M++  +    + Y  L+    K S+  +A+ ++  +   G +P +  YN +I+ F 
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  +  +A+ L  EM+ +GV P + +Y  L++ + +     E      +M E        
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKG 910

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           T + +   + +  M+ +A RL  ++ K+
Sbjct: 911 TLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 210/465 (45%), Gaps = 41/465 (8%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           S ++   GK  M + A+S   Q++  +       Y+++I + ++     K   I++ + +
Sbjct: 167 SEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCN 226

Query: 118 SG-IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            G   PD V Y+ +I+ FGK   +  A  L +EM+E G+ P    Y+TLL +Y +  K  
Sbjct: 227 DGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVE 286

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +AL V  EM +  C L + T    I   G+     DA R+F  M K G  P VV  N+L+
Sbjct: 287 KALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLI 346

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGI 295
            + G+       + LFR M+  + + NVVTYNT+IK ++       +A +  ++M+  GI
Sbjct: 347 NILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGI 406

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV-------------------- 335
            P++ TYS +I  + K  ++++A +L +++   G    P                     
Sbjct: 407 APSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANE 466

Query: 336 ---------------LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
                          +Y  MI  + + G ++ A  L +E+     +P+       ++ + 
Sbjct: 467 LFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMV 526

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           RAG I+EA  + R   + G   D++    ++   +R       IE+F KM+S+   PD+ 
Sbjct: 527 RAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAV 586

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
               VL        FE A  L  EM  +G  +++  +  +L   G
Sbjct: 587 SYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVG 631



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 1/267 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           E  +  P+V  YN V++ +   K     A   F++M+  GIAP  +TYS LI  F K   
Sbjct: 366 ESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNR 425

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            + A+  L++M++         Y +LI    K+  Y  A  +F  LK +        Y  
Sbjct: 426 IEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAV 485

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MI  FGK     EA  L  EM + G KPD  +Y+ L++  V      EA S+   M+E  
Sbjct: 486 MIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           C  DL + NI+++   +  +   A  +F  M+   I P  VSYNT+L     A LF EA 
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAA 605

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGK 276
            L R M  K  E N +TY ++++  GK
Sbjct: 606 KLMREMNLKGFEYNNITYTSILEAVGK 632



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 39/338 (11%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +VF Y   ++ + +A + + A+ +F +M + G  PD    ++LI   GK G  +  +   
Sbjct: 303 TVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLF 362

Query: 78  QQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ME  +   ++V Y+ +I+ L    +  S+A S F ++K  GI P    Y+ +I+ F K
Sbjct: 363 RKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCK 422

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A LL+EEM E+G  P   +Y +L+N   +  ++  A  +F E+ E NC      
Sbjct: 423 TNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKE-NCGHSSAR 481

Query: 197 C-NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA------- 248
              +MI  +G+     +A  LF  M K+G  P V +YN L+     A +  EA       
Sbjct: 482 VYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTM 541

Query: 249 ----------------------------IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                                       I +F  M+   I+ + V+YNT++     +   
Sbjct: 542 DENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLF 601

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           E+A  LM+EM  +G E N ITY++I+   GK  + DRA
Sbjct: 602 EEAAKLMREMNLKGFEYNNITYTSILEAVGKVDE-DRA 638



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 176/419 (42%), Gaps = 44/419 (10%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           D  ++  +I+   +A  + E    I++M R       +V  S ++ L  +     +ALSV
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYG 240
           F ++    C    TT N MI +  Q    +    ++  M   G   P  V+Y+ L+  +G
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +   +  AI LF  M+   +      Y T++ IY K  + EKA ++++EM+++G      
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVF 305

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+  I   GKAG++D A  +F  +   G + D VL  ++I    +VG +    +L  ++
Sbjct: 306 TYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKM 365

Query: 361 R----QPNTIPRETAITIL--ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
                +PN +   T I  L   +A   E A+W                            
Sbjct: 366 ESWQCKPNVVTYNTVIKALFECKAPASEAASW---------------------------- 397

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
                   FEKM+  G  P S   +++++ + K    E A  L  EM E+G       + 
Sbjct: 398 --------FEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYC 449

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            +++  G  K +     LF  L  +   +   ++ V+   + +  RL++A  + N M K
Sbjct: 450 SLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEK 508



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 6/185 (3%)

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGL 349
           + R  E ++ ++  +I    +AG         Q + RSS   I  V    ++    +  +
Sbjct: 119 KRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKM 178

Query: 350 VAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEV-KDISVFG 404
           V  A  + ++++     P  T     I +L + G +E+   ++ +  + G    D   + 
Sbjct: 179 VNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYS 238

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I  F +   Y + I +F++M+  G +P + I   +L  Y KL + E A D+  EM+++
Sbjct: 239 ALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDK 298

Query: 465 GCVFS 469
           GC  +
Sbjct: 299 GCTLT 303


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 213/470 (45%), Gaps = 14/470 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P+V  +N+V+    +AK  + A+ L + M ++G  P+ +T++ LIT   K      A 
Sbjct: 228 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 287

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++M     S ++V YS +I    K      A  +F  ++     P++V +N +I+  
Sbjct: 288 QLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 347

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLD 193
            KAK  +EAR L   MRE G  PD ++Y++L++   ++ +  EA  +F  + E      +
Sbjct: 348 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 407

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T + +   Y  L    DA R+F  +   G  P + +Y +L+  Y +     E + L  
Sbjct: 408 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 467

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEH---EKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            M  K     V   NT+  + G   E    E+A  L   M  RG   +A+ Y+ ++    
Sbjct: 468 EMASKGFPPRV---NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 524

Query: 311 KAGKLDRA-AMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           +A K D+A A+L Q +     + +P       ++ +  +VG    AK+LLH++ +     
Sbjct: 525 RASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAA 584

Query: 368 RETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             ++    ++ L+R  R +EAT VF     AG   +IS    +I       K  +  E+ 
Sbjct: 585 AVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 644

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           ++M   G  PD      ++  Y K    + A  L  EM E G   +D  H
Sbjct: 645 QRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 694



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 239/527 (45%), Gaps = 9/527 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  Y  ++  + +A +++ A G+  EM  +G APD  T+STLI    K G  + A  
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182

Query: 76  WLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            L+ + Q  +      +  +I+ L  K +    A  +   + + G  P ++ +N +IN F
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KAK    A  L+E M E+G  P+  +++ L+    + ++  EA  +  +M    C  ++
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I+   +     DA  LF  M +    P+VV++N L+    +A+   EA  L+  
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP-NAITYSTIIAIWGKAG 313
           M+      +++TYN++I    KS + ++A  L Q +   G+   NA+TYST+   +   G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           ++  A  +F  L   G   D   Y ++I+ Y +         L+ E+      PR   ++
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM--- 426
                L      E A  +F      G   D  ++  ++E  +R  K+   + V E++   
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           R   + P S  +  ++ S  ++ + + A  L  +M E G   +   + ++LS     + +
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +    +FE + S     +    +VV      A +++DA  ++ RM+K
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 649



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 140/577 (24%), Positives = 252/577 (43%), Gaps = 55/577 (9%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
            DW    +R   +VF+ N  L  + R  + + A  LF     R   P+++TY  LI  F 
Sbjct: 11  FDW--ARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFS--RLKSSGIVPD 123
             G  D AI  L++M+     G+ V+++ L+   + L D  + +      R  +    PD
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLM---KGLCDAGRVVEALEHFRAMAKDCAPD 125

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           ++ Y  +++   KA  F EA+ ++ EM  QG  PDTV++STL++   +     +A  V  
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185

Query: 184 E-----MNEVNCPLDLTT---CN------------------------IMID-VYGQLDMA 210
           +     M   +   +      CN                        +M + V      A
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 245

Query: 211 KDAD---RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
           KD D   +L   M + G  P+V ++  L+    +A   GEA  L   M       NVVTY
Sbjct: 246 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTY 305

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           +T+I    K  + + A  L Q M+ R   PN +T++ +I    KA +++ A  L+ ++R 
Sbjct: 306 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 365

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIE 382
           +G   D + Y ++I    +   V  A +L   + +      N +   T     A  GR+ 
Sbjct: 366 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 425

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  +F    D G   D++ +  +I  + +  +   V+E+ E+M S G+ P  + ++ VL
Sbjct: 426 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR-----KDFNMLESLFERLD 497
               +    E A  L+  M   GC   D + + ++    AR     K   +LE + ++ D
Sbjct: 486 GGLFEGNHTERAIQLFDSMAARGCT-DDALIYNLVVEGMARASKHDKALAVLEQVIDKRD 544

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
              N +   +  +V  + +   + +DA +++++M++R
Sbjct: 545 RKFNPSSSAVDALVESLCQ-VGKTDDAKQLLHKMSER 580



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 158/369 (42%), Gaps = 4/369 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P+V  +N+++  + +AK+ E A  L+  MR+ G APD  TY++LI    K    
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 388

Query: 71  DSAISWLQQMEQDRVSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    Q + +  VS  + V YS L      L   + A  IFS L   G  PDL  Y +
Sbjct: 389 DEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTS 448

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I  + K     E   L+EEM  +G  P   + S +L    E +    A+ +F  M    
Sbjct: 449 LILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 508

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSM---RKMGIDPSVVSYNTLLRVYGEAELFG 246
           C  D    N++++   +      A  +   +   R    +PS  + + L+    +     
Sbjct: 509 CTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTD 568

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  L   M  +     V +YN ++    +    ++AT + + M + G  P   T + +I
Sbjct: 569 DAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 628

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           +    A K+D A  L Q++   G   D     T+I  Y + G    A++LL E+ +    
Sbjct: 629 SWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE 688

Query: 367 PRETAITIL 375
           P +T   +L
Sbjct: 689 PNDTTHDLL 697



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 12/260 (4%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF+   +  +  +V S N  L +        EA+ LFR    +    N  TY  +I+ + 
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
            + + + A  L++EM++ G E NA+ ++T++     AG++  A   F+ + +     D +
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 336 LYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y  ++ A  + G    A+ +L E+      P+T+   T I  L + G  E+A  V    
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR----SAGYFPDSHIIALVLNSYGK 447
              G     + F  +I+      KY N +E+  K+     + G+ P   +  LV+N + K
Sbjct: 188 IQRGMGNSDAAFETIIQRLC--NKY-NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 244

Query: 448 LREFETADDLYSEMQEEGCV 467
            ++ ++A  L   M E+GCV
Sbjct: 245 AKDLDSAYKLLEVMIEKGCV 264



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 2/167 (1%)

Query: 1   RSVAILDWI--NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +++A+L+ +    + +++PS  A + ++ ++ +  + + A  L  +M +RG A    +Y+
Sbjct: 531 KALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYN 590

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
            L++   +   +D A    + M     + ++   + +I      +    A  +  R+   
Sbjct: 591 RLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL 650

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           G  PD+   NT+I  + K+     AR L+EEM E G++P+  ++  L
Sbjct: 651 GCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 180/360 (50%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+VF YN +L   +  K  +    +   M +  +     TYS LI  +   G  + A   
Sbjct: 250 PNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKI 309

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M +  +  D+ +YS++I  +R+L +  +A ++F  +    IVP+   Y  +I    K
Sbjct: 310 FEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCK 369

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   + A +L+ EM+ +GV  + V ++T ++ Y    K  EAL + A M +     D+ T
Sbjct: 370 AGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFT 429

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+ +   +L    +A  +  SM + G+ P+VV++   + +Y +     EA  LFR M+
Sbjct: 430 YNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDME 489

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +K    N++TYNT+I  Y K  + ++A  +  EM N+G+ P+  TYS++I      G++D
Sbjct: 490 KKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVD 549

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  LF ++R  G+  +   Y +MI    + G    A +L  E+ +   IP +   T L 
Sbjct: 550 EALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V+ Y+ ++    R    + A  LFDEM QR I P+ +TY  LI    K G  ++A   L 
Sbjct: 322 VYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLL 381

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+   V  +LV+++  ++   +     +A+ + + ++  GI  D+  YN + N   K  
Sbjct: 382 EMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLH 441

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            + EA+ ++  M E+GVKP+ V+++  + +Y +     EA  +F +M +     ++ T N
Sbjct: 442 RYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYN 501

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL--FGEAIHLFRLMQ 256
            +ID Y + +  K A ++   M   G+ P + +Y++L  ++GE  +    EA+ LF  M+
Sbjct: 502 TLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSL--IHGECIVGRVDEALKLFNEMR 559

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I +NV TY +MI    K    ++A  L  EM   G+ P+   +++++  + K   L 
Sbjct: 560 LKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKP--LT 617

Query: 317 RAAMLFQKLRSS 328
            A +  QK   S
Sbjct: 618 HAGLDIQKASDS 629



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 209/467 (44%), Gaps = 45/467 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGM 69
           E  ++   V +  +V+  + R  + E A  L DEM  +GI  P+ +TY+TL+  +     
Sbjct: 208 ESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKD 267

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
                  L+ ME+++V   +  YS LI+       YS          SSG +        
Sbjct: 268 RKGVDEILKLMEKEQVVFSVATYSILIQW------YS----------SSGDI-------- 303

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                      +EA  + EEMRE+ ++ D   YS++++          A ++F EM++ +
Sbjct: 304 -----------EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD 352

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +  T   +I    +    + A+ L   M+  G+D ++V +NT +  Y       EA+
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEAL 412

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L  +M++K I  +V TYN +     K   +++A  ++  M  +G++PN +T++  I I+
Sbjct: 413 RLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIY 472

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K G L  A  LF+ +   G   + + Y T+I AY +   V  A ++  E+     +P  
Sbjct: 473 CKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL 532

Query: 370 TAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
              + L       GR++EA  +F +    G  ++++ +  MI   S+  +     +++++
Sbjct: 533 YTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDE 592

Query: 426 MRSAGYFPDSHIIALVLNSYGKL-----REFETADDLYSEMQEEGCV 467
           M   G  PD  +   ++ S+ K       + + A D  S ++ E C 
Sbjct: 593 MMKIGLIPDDRVFTSLVGSFHKPLTHAGLDIQKASDSDSVLRRENCC 639



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 197/438 (44%), Gaps = 6/438 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELA 99
           ++D + ++G+  +  +   L+    + G  D  + +  +M E ++    +   + +I++ 
Sbjct: 167 VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVL 226

Query: 100 RKLSDYSKAISIFSRLKSSGIV-PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
            +  +  KA  +   +   GIV P++  YNT++N +   K  K    +++ M ++ V   
Sbjct: 227 CRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS 286

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             +YS L+  Y  +    EA  +F EM E N  +D+   + MI    +L   K A  LF 
Sbjct: 287 VATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFD 346

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M +  I P+  +Y  L+    +A     A  L   MQ K ++ N+V +NT +  Y +  
Sbjct: 347 EMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRG 406

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + ++A  L   M+ +GI  +  TY+ +     K  + D A  +   +   GV+ + V + 
Sbjct: 407 KMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFT 466

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
             I  Y + G +A A+RL  ++ +    PN I   T I    +  ++++A  +  +  + 
Sbjct: 467 MFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINK 526

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G + D+  +  +I       +    +++F +MR  G   +      +++   K    + A
Sbjct: 527 GLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEA 586

Query: 455 DDLYSEMQEEGCVFSDQV 472
             LY EM + G +  D+V
Sbjct: 587 FKLYDEMMKIGLIPDDRV 604



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYV--ENHKFVEALSVFAEMN 186
           +I+V  +    ++A+ L++EM  +G VKP+  +Y+TLLN YV  ++ K V+ +    E  
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +V     + T +I+I  Y      ++A+++F  MR+  I+  V  Y++++          
Sbjct: 282 QV--VFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMK 339

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A  LF  M +++I  N  TY  +I    K+ + E A  L+ EMQ++G++ N + ++T +
Sbjct: 340 RAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM 399

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
             + + GK+D A  L   +   G+  D   Y  +     ++     AK +L+ + +    
Sbjct: 400 DGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +     I I  + G + EA  +FR     GEV +I  +  +I+ + + +K     ++
Sbjct: 460 PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             +M + G  PD +  + +++    +   + A  L++EM+ +G   +   +  M+S
Sbjct: 520 KSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMIS 575



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 125/277 (45%), Gaps = 6/277 (2%)

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           ++ NV TYNT++  Y    + +    +++ M+   +  +  TYS +I  +  +G ++ A 
Sbjct: 248 VKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAE 307

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITIL 375
            +F+++R   +E+D  +Y +MI    R+G +  A  L  E+ Q + +P        I  +
Sbjct: 308 KIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGV 367

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +AG++E A  +  +    G   ++ +F   ++ + R  K    + +   M   G   D 
Sbjct: 368 CKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADV 427

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM-LSLYGARKDFNMLESLFE 494
               ++ N   KL  ++ A  + + M E+G V  + V F M + +Y    +    E LF 
Sbjct: 428 FTYNILANGLCKLHRYDEAKCILNSMVEKG-VKPNVVTFTMFIEIYCKEGNLAEAERLFR 486

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            ++    +     ++ +   Y +  ++  A +I + M
Sbjct: 487 DMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 93/184 (50%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L  I E+   +  VF YN++   + +  +++ A  + + M ++G+ P+  T++  I  + 
Sbjct: 414 LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYC 473

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           KEG    A    + ME+     +++ Y+ LI+   K     +A  I S + + G++PDL 
Sbjct: 474 KEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLY 533

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y+++I+         EA  L  EMR +G+  +  +Y+++++   +  +  EA  ++ EM
Sbjct: 534 TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593

Query: 186 NEVN 189
            ++ 
Sbjct: 594 MKIG 597


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 201/423 (47%), Gaps = 4/423 (0%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            + PSV+  N++L ++++ K+ EL   LF EM  +GI P+  T++ LI     EG    A 
Sbjct: 945  FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 1004

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            + L+QME++     +V Y+ L+    K   Y  AI +   +   GI  D+  YN  I+  
Sbjct: 1005 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 1064

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                   +A LL+++MR++ + P+ V+Y+TL+N +V+  K   A  VF EM++ +   + 
Sbjct: 1065 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC 1124

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T N +I  +  +   ++A RL   M   G+  + V+Y TLL    + E F  A  L   
Sbjct: 1125 VTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 1184

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            M+  ++    + Y  +I    K+   ++A  L+  M   G+ P+ ITYS++I  + + G 
Sbjct: 1185 MRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGN 1244

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
            +  A  +  ++  SG+ ++ ++Y T+I  + + G V  A ++   +       +      
Sbjct: 1245 IKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNV 1304

Query: 371  AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             ++ L R G++ EA          G V +   + C+I  +       N    F+ M   G
Sbjct: 1305 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 1364

Query: 431  YFP 433
              P
Sbjct: 1365 QHP 1367



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 235/537 (43%), Gaps = 11/537 (2%)

Query: 10   NEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
            NE +++  SP+   YN ++        +E A  L D M   G+  +  TY TL+    K 
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 1172

Query: 68   GMFDSAISWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
              F+ A   L++M   D V G +  Y+ LI+   K     +A+ +   +   G+ PD++ 
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIA-YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 1231

Query: 127  YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            Y+++IN F +    K A+ +I  M   G+  + + YSTL+  + ++    EA+ V+A MN
Sbjct: 1232 YSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMN 1291

Query: 187  EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                  D  TCN+++    +     +A++    M ++G+ P+ ++Y+ ++  YG      
Sbjct: 1292 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 1351

Query: 247  EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
             A   F  M +     +  TY +++K   K     +A   +  +       +++ Y+T++
Sbjct: 1352 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 1411

Query: 307  AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
            A   K+G L  A  LF K+  + V  D   Y +++    R G    A  L          
Sbjct: 1412 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 1471

Query: 363  -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
             PN +     +  L++AG  + A + F +    G   D   F  +I+  SR  +     +
Sbjct: 1472 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 1531

Query: 422  VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
             F  MR  G  P+     ++L+ + K +       LYS M  EG +F D++ F  L L  
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG-IFPDKLTFHSLILGL 1590

Query: 482  ARKDFNMLE-SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
            ++     L   L  ++  +  +  +   +++   Y  + ++  A  ++N MN    F
Sbjct: 1591 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 1647



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 222/517 (42%), Gaps = 55/517 (10%)

Query: 4    AILDWINEEARYSPS---------------VFAYNVVLRNVLRAKQWELAHGLFDEMRQR 48
             +L+W  ++ RY  +               V  YNV + N+    +   A+ L  +MR+ 
Sbjct: 1024 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 1083

Query: 49   GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
             I+P+  TY+TLI  F KEG    A     +M +  +S + V Y+ LI     + D+ +A
Sbjct: 1084 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 1143

Query: 109  ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            + +   ++++G+  + V Y T++N   K + F+ A+ L+E MR   +    ++Y+ L++ 
Sbjct: 1144 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203

Query: 169  YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
              +N    EA+ +   M +     D+ T + +I+ + ++   K A  +   M + G+  +
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263

Query: 229  VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
             + Y+TL+  + +     EA+ ++ +M       +  T N ++    +  +  +A   + 
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323

Query: 289  EMQNRGIEPNAITYSTIIAIWG-----------------------------------KAG 313
             M   G+ PN+ITY  II  +G                                   K G
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 1383

Query: 314  KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
             L  A     +L      +D V+Y T++    + G +  A  L  ++ Q N +P      
Sbjct: 1384 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 1443

Query: 370  TAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + +T L R G+   A  +F  A   G +  +  ++ C+++  S+          FE+M  
Sbjct: 1444 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503

Query: 429  AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  PD+     +++S  +  +   A+D +S M+  G
Sbjct: 1504 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 182/449 (40%), Gaps = 5/449 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL-QQM 80
            YN +L    ++     A  LFD+M Q  + PD YTYS+L+T   ++G   +A+      M
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +  +  + V+Y+ L++   K      A   F  +   G  PD VA+N +I+   +    
Sbjct: 1467 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 1526

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             +A      MR  GV P+  +Y+ LL+ + +    +  LS+++ M       D  T + +
Sbjct: 1527 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 1586

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            I    +  +     +L   M   G      ++N L+  Y E+    +A  L   M    +
Sbjct: 1587 ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 1646

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              +  TYN +     K     ++T ++ EM   G+ P    Y T+I    + G +  A  
Sbjct: 1647 FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 1706

Query: 321  LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
            L  ++ + G     V    M+      G    A  +L  + +   +P     T L     
Sbjct: 1707 LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1766

Query: 377  RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            R  +I EA  +       G   D+  +  +I     N   A   E++E+MR     P+  
Sbjct: 1767 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1826

Query: 437  IIALVLNSYGKLREFETADDLYSEMQEEG 465
              A+++++          + L +++QE G
Sbjct: 1827 TYAVLVDAISAANNLIQGEKLLTDLQERG 1855



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 196/454 (43%), Gaps = 9/454 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            PS F Y  +L+ + +      A    + +     A D   Y+TL+    K G    A++ 
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 1426

Query: 77   LQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG-IVPDLVAYNTMINVF 134
              +M Q+ V  D   YS+L+  L RK      A+ +F      G + P+ V Y  +++  
Sbjct: 1427 FDKMVQNNVLPDSYTYSSLLTGLCRK-GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLD 193
             KA   K A    EEM ++G  PDTV+++ +++      + ++A   F+ M     CP +
Sbjct: 1486 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP-N 1544

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            L T NI++  + +         L+ +M + GI P  +++++L+    ++ +    + L  
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604

Query: 254  LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
             M  +    +  T+N +I  Y +S +  KA +L+  M   G+ P+  TY+ I     K  
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 314  KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
                + ++  ++  +GV      Y T+I    RVG +  A +L  E+        E A +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 374  ILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             + R     G+ E+A  V         +  I+ F  ++  F R+ K A  +++   M   
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784

Query: 430  GYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            G   D     +++       +   A +LY EM+ 
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1818



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 112/522 (21%), Positives = 197/522 (37%), Gaps = 75/522 (14%)

Query: 21   AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
             Y  +L  + + +++ELA  L + MR   +      Y+ LI    K GM D A+  +  M
Sbjct: 1161 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 1220

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +D V+ D++ YS+LI    ++ +   A  I  R+  SG+V + + Y+T+I  F +    
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 1280

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             EA  +   M   G   D  + + L++    + K  EA      M+ +    +  T + +
Sbjct: 1281 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSV------------------------------- 229
            I+ YG +    +A   F  M K G  PS                                
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 1400

Query: 230  ----VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
                V YNTLL    ++    EA+ LF  M +  +  +  TY++++    +  +   A  
Sbjct: 1401 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460

Query: 286  LMQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L      RG + PN + Y+ ++    KAG    A   F+++   G   D V +  +I + 
Sbjct: 1461 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 1520

Query: 345  ERVGLVAHAKR-------------------LLHELRQ--------------------PNT 365
             R G +  A                     LLH   +                    P+ 
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580

Query: 366  IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
            +   + I  L+++G  +    +  +    G + D   F  +I  +S + K     ++   
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 1640

Query: 426  MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            M + G FPD      + N   K   F  +  +  EM E G +
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVI 1682



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 139/315 (44%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
             P++  YN++L    + +       L+  M + GI PD+ T+ +LI    K G+ D  + 
Sbjct: 1542 CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 1601

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             L +M  +    D   ++ LI    +     KA  + + + + G+ PD   YN + N   
Sbjct: 1602 LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 1661

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K   F+E+ +++ EM E GV P    Y TL+N          A  +  EM  +       
Sbjct: 1662 KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 1721

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              + M+         +DA  +   M +M + P++ ++ TL+  +       EA+ L  +M
Sbjct: 1722 AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1781

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +   ++ +VV YN +I     + +   A  L +EM++R + PN  TY+ ++     A  L
Sbjct: 1782 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1841

Query: 316  DRAAMLFQKLRSSGV 330
             +   L   L+  G+
Sbjct: 1842 IQGEKLLTDLQERGL 1856



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 152/362 (41%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P+   Y  ++  + +A   + A   F+EM ++G  PD   ++ +I    + G    A  +
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 1532

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
               M    V  +L  Y+ L+    K     + +S++S +   GI PD + ++++I    K
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + +      L+ +M  +G   D  +++ L+N Y E+ K  +A  +   MN +    D  T
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 1652

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             N + +   +    +++  +   M + G+ P    Y TL+           A  L   M+
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                  + V  + M++      + E A  ++  M    + P   T++T++  + +  K+ 
Sbjct: 1713 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1772

Query: 317  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
             A  L   +   G+++D V Y  +I+     G  A A  L  E+R  +  P  T   +L 
Sbjct: 1773 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832

Query: 377  RA 378
             A
Sbjct: 1833 DA 1834



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 156/411 (37%), Gaps = 58/411 (14%)

Query: 127  YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            Y    ++  KA+++  A+ ++  + + G+   ++              F   +  +   N
Sbjct: 866  YCLTAHILVKARMYDSAKSILRHLCQMGIGSKSI--------------FGALMDTYPLCN 911

Query: 187  EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
             +    DL     +I VY +  M   A   F  +  +G  PSV + N +L    + +   
Sbjct: 912  SIPSVFDL-----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTE 966

Query: 247  EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
                LFR M  K I  NV T+N +I         +KA NL+++M+  G  P  +TY+T++
Sbjct: 967  LVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLL 1026

Query: 307  AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
              + K G+   A  L   +   G+E D   Y   I         A A  LL ++R+    
Sbjct: 1027 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086

Query: 363  PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            PN +   T I    + G+I  A                                    +V
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAA-----------------------------------QV 1111

Query: 423  FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
            F +M      P+      ++  +  + +FE A  L   M+  G   ++  +  +L+    
Sbjct: 1112 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 1171

Query: 483  RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + F + + L ER+  +  +     + V+     +   L++A +++  M K
Sbjct: 1172 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYK 1222


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 222/482 (46%), Gaps = 26/482 (5%)

Query: 12  EARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           + R +PS+  +N +L  +++ K  +     L  +M  +G+ PD +T S LI C+   G  
Sbjct: 59  QIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQM 118

Query: 71  DSAISWLQQMEQ------DRVSGDLVLYSNLIELA---------------RKLSDYSKAI 109
             A S   ++ +       +V+  L+ + +++ L                 K+     A+
Sbjct: 119 TFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAAL 178

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +  +++   +  ++V Y+T+I+   K KL  +A  L  EM  + + P  V++S+L+  +
Sbjct: 179 QVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGF 238

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
               KF +A  +F EM   N   D  T NI++D   +    K+A  +   M K G++P+V
Sbjct: 239 CIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTV 298

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+YNTL+  Y      G+A H+  ++ R  +  N  +YN MI  + K    ++A  L  E
Sbjct: 299 VTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHE 358

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M  RGI P+ +TY+++I    KAG++  A  L  ++ ++ +  D V Y ++I  + +   
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418

Query: 350 VAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           V  A  L+ +++    QPN       I  L + G+++ A  VF+     G   +   +  
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI    +   +     +  KM   G  PD+     ++ +     E E A  L  EM  +G
Sbjct: 479 MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538

Query: 466 CV 467
            V
Sbjct: 539 VV 540



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 6/322 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P+V  ++ ++       +++ A  LF+EM  + I PD YT++ L+    KEG    A
Sbjct: 223 RIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA 282

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + +  M ++ V   +V Y+ L++   L  ++      +SI SR++   + P+  +YN M
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR---VAPNSRSYNIM 339

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F K K+  EA  L  EM  +G+ P  V+Y++L++   +  +   A  +  EM+    
Sbjct: 340 INGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCI 399

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P D+ T N +IDV+ +      A  L   +++ GI P++ +YN L+    +      A  
Sbjct: 400 PADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQD 459

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F+ +  K    N  TYN MI    K    ++A  L+ +M++ GI P+A+TY TII    
Sbjct: 460 VFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALF 519

Query: 311 KAGKLDRAAMLFQKLRSSGVEI 332
              + ++A  L +++   GV +
Sbjct: 520 HKDENEKAQKLLREMVIKGVVV 541



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A++  I E     P++  YN+++  + +  Q + A  +F ++  +G   + +TY+ +
Sbjct: 421 KAIALVKKIKEHG-IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    KEG+FD A   L +ME + +  D V Y  +I+      +  KA  +   +   G+
Sbjct: 480 INGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539

Query: 121 V 121
           V
Sbjct: 540 V 540


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 207/452 (45%), Gaps = 4/452 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PSV+  N +L +++++ +         EM +R I PD  T++ LI     EG F  + 
Sbjct: 154 FNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSS 213

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +Q+ME+   +  +V Y+ ++    K   +  AI +   +   G+  D+  YN +I+  
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDL 273

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            ++    +  LL+ +MR++ + P+ V+Y+TLLN +    K + A  +  EM       + 
Sbjct: 274 CRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNH 333

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +ID +      K+A ++F  M   G+  + VSY  LL    +   F  A   +  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+R  +    +TY  MI    K+   ++A  ++ EM   GI+P+ +TYS +I  + + G+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGR 453

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRET 370
           L  A  +  ++   G+  + ++Y T+I    R+G +    R    ++ E   P+      
Sbjct: 454 LKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNV 513

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +T L +AG++ EA    R     G + +   F C+I  +  + +      VF++M   G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVG 573

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           + P       +L    K      A+     +Q
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 208/454 (45%), Gaps = 6/454 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PSVF  ++++R  LR    + +  +F  M   G  P  YT + ++    K     S  S
Sbjct: 122 NPSVF--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M + ++  D+  ++ LI +      + K+  +  +++ SG  P +V YNT+++ + 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   FK A  L++ M  +GV  D  +Y+ L++    +++  +   +  +M +     +  
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +++ +        A +L   M   G+ P+ V++N L+  +     F EA+ +F +M
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +    V+Y  ++    K+ E + A      M+  G+    ITY+ +I    K G L
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D A ++  ++   G++ D V Y  +I  + RVG +  AK ++  + +    PN I   T 
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G ++E   ++      G   D   F  ++    +  K A   E    M S G 
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++     ++N YG   E   A  ++ EM + G
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVG 573



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 193/446 (43%), Gaps = 32/446 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +Y V+L  + +  +++LA G +  M++ G+   R TY+ +I    K G  D A+  L +M
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEM 429

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            +D +  D+V YS LI    ++     A  I  R+   G+ P+ + Y+T+I    +    
Sbjct: 430 SKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           KE   + E M  +G  PD  +++ L+    +  K  EA      M       +  + + +
Sbjct: 490 KETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCL 549

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I+ YG       A  +F  M K+G  P+  +Y +LL+   +      A    + +Q    
Sbjct: 550 INGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPA 609

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             + V  NT+I    KS   +KA +L  EM  R I P++ TY+++I+   + GK    A+
Sbjct: 610 AVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK-TVIAI 668

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           LF K                  A  R  LV            PN +     +  + +AG+
Sbjct: 669 LFAK-----------------EAEARGNLV------------PNKVMYTCFVDGMFKAGQ 699

Query: 381 IEEATWVFRQAFDA-GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
             +A + FRQ  D  G  +D+     MI+ +SR  K     ++  +M +    P+     
Sbjct: 700 -WKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYN 758

Query: 440 LVLNSYGKLREFETADDLYSEMQEEG 465
           ++L+ Y K +   T+  LY  M   G
Sbjct: 759 ILLHGYSKRKHVSTSFMLYRSMILSG 784



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 211/532 (39%), Gaps = 77/532 (14%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFD--------------------------- 43
           E++ Y+P++  YN VL    +  +++ A  L D                           
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRS 279

Query: 44  --------EMRQRGIAPDRYTYSTLITCFGKEGM-------------------------- 69
                   +MR+R I P+  TY+TL+  F  EG                           
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNAL 339

Query: 70  ---------FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
                    F  A+     ME   + G  V Y  L++   K +++  A   + R+K +G+
Sbjct: 340 IDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
               + Y  MI+   K     EA +++ EM + G+ PD V+YS L+N +    +   A  
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKE 459

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +   +  V    +    + +I    ++   K+  R++ +M   G  P   ++N L+    
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLC 519

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A    EA    R M    I  N V+++ +I  YG S E  KA ++  EM   G  P   
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFF 579

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY +++    K G L  A    + L++    +D V+  T+I A  + G +  A  L  E+
Sbjct: 580 TYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEM 639

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE-VKDISVFGCMIELFSRNKK 415
            Q    P++    + I+ L R G+   A    ++A   G  V +  ++ C ++   +  +
Sbjct: 640 VQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQ 699

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM--QEEG 465
           +       ++M   G   D      +++ Y ++ + E   DL  EM  Q +G
Sbjct: 700 WKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQG 751



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/457 (21%), Positives = 195/457 (42%), Gaps = 7/457 (1%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            + P+ F Y  +L+ + +      A      ++    A D    +TLIT   K G  D A+
Sbjct: 574  HHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAV 633

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNTMINV 133
            S   +M Q  +  D   Y++LI    +      AI      ++ G +VP+ V Y   ++ 
Sbjct: 634  SLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDG 693

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
              KA  +K      ++M + G+  D V+ + +++ Y    K  +   +  EM   N   +
Sbjct: 694  MFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPN 753

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            LTT NI++  Y +      +  L+ SM   GI P  ++  +++    E+ +    + + +
Sbjct: 754  LTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILK 813

Query: 254  LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
                + +E +  T+N +I     + E   A +++  M + GI  +  T   I+++  +  
Sbjct: 814  AFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNH 873

Query: 314  KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG-----LVAHAKRLLHELRQPNTIPR 368
            +   + M+  ++   G+  +   Y  ++    RVG      V   + + H++  PN +  
Sbjct: 874  RFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN-VAE 932

Query: 369  ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
               +  LA+ G+ +EA+ + R       V  I+ F  ++ LF +N      +E+   M +
Sbjct: 933  SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSN 992

Query: 429  AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G   D     +++       +   A +L+ EM+ +G
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDG 1029



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/526 (19%), Positives = 209/526 (39%), Gaps = 78/526 (14%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P+  +++ ++     + +   A  +FDEM + G  P  +TY +L+    K G   +A  +
Sbjct: 541  PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            L+ ++    + D V+ + LI    K  +  KA+S+F  +    I+PD   Y ++I+   +
Sbjct: 601  LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660

Query: 137  AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                  A L  +E   +G + P+ V Y+  ++   +  ++        +M+++    D+ 
Sbjct: 661  KGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVV 720

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T N MID Y ++   +    L + M      P++ +YN LL  Y + +    +  L+R M
Sbjct: 721  TTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSM 780

Query: 256  QRKEI---------------EQNVV--------------------TYNTMIKIYGKSLEH 280
                I               E N++                    T+N +I     + E 
Sbjct: 781  ILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEI 840

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
              A +++  M + GI  +  T   I+++  +  +   + M+  ++   G+  +   Y  +
Sbjct: 841  NWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900

Query: 341  IVAYERVG-----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
            +    RVG      V   + + H++  PN +     +  LA+ G+ +EA+ + R      
Sbjct: 901  LNGLCRVGDIKTAFVVKEEMIAHKICPPN-VAESAMVRALAKCGKADEASLLLRSMLKMK 959

Query: 396  EVKDISVFGCMIELFSRNKKYA---------------------NVI-------------- 420
             V  I+ F  ++ LF +N                         NV+              
Sbjct: 960  LVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAF 1019

Query: 421  EVFEKMRSAGYFPD-SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            E+FE+M+  G+  + +   ALV     +  EF   D +  ++   G
Sbjct: 1020 ELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARG 1065



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/485 (20%), Positives = 197/485 (40%), Gaps = 40/485 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y+ ++    R  + + A  +   + + G++P+   YSTLI    + G     I  
Sbjct: 436 PDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRI 495

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M  +  + D   ++ L+    K    ++A      + S GI+P+ V+++ +IN +G 
Sbjct: 496 YEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGS 555

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A  + +EM + G  P   +Y +LL    +    + A      +  V   +D   
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVM 615

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-------------VYGEAE 243
           CN +I    +      A  LF  M +  I P   +Y +L+                 EAE
Sbjct: 616 CNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 244 LFGEAI-----------HLFRLMQRKE------------IEQNVVTYNTMIKIYGKSLEH 280
             G  +            +F+  Q K             + ++VVT N MI  Y +  + 
Sbjct: 676 ARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKI 735

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           EK  +L+ EM N+   PN  TY+ ++  + K   +  + ML++ +  SG+  D +   ++
Sbjct: 736 EKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795

Query: 341 IVAYERVGLVAHAKRLLHE-LRQPNTIPRETAITILARAGRIEEATWVFRQA---FDAGE 396
           I+      ++    ++L   + +   + R T   ++++     E  W F         G 
Sbjct: 796 ILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D +    ++ + +RN ++     V  +M   G  P+S     +LN   ++ + +TA  
Sbjct: 856 SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915

Query: 457 LYSEM 461
           +  EM
Sbjct: 916 VKEEM 920



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/385 (20%), Positives = 164/385 (42%), Gaps = 3/385 (0%)

Query: 3    VAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +AIL     EAR +  P+   Y   +  + +A QW+       +M + G+  D  T + +
Sbjct: 666  IAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I  + + G  +     L +M       +L  Y+ L+    K    S +  ++  +  SGI
Sbjct: 726  IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            +PD +   ++I    ++ + +    +++    +GV+ D  +++ L++    N +   A  
Sbjct: 786  LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFD 845

Query: 181  VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            +   M  +   LD  TC+ ++ V  +    +++  +   M K GI P    Y  LL    
Sbjct: 846  MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905

Query: 241  EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                   A  +   M   +I    V  + M++   K  + ++A+ L++ M    + P   
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIA 965

Query: 301  TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            +++T++ ++ K G +  A  L   + + G+++D V Y  +I      G +A A  L  E+
Sbjct: 966  SFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025

Query: 361  RQPNTIPRETAITILARAGRIEEAT 385
            ++   +   T    L   G + + T
Sbjct: 1026 KRDGFLANVTTYKALV-GGILSQGT 1049


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 201/423 (47%), Gaps = 4/423 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PSV+  N++L ++++ K+ EL   LF EM  +GI P+  T++ LI     EG    A 
Sbjct: 194 FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 253

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + L+QME++     +V Y+ L+    K   Y  AI +   +   GI  D+  YN  I+  
Sbjct: 254 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 313

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  +A LL+++MR++ + P+ V+Y+TL+N +V+  K   A  VF EM++ +   + 
Sbjct: 314 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC 373

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  +  +   ++A RL   M   G+  + V+Y TLL    + E F  A  L   
Sbjct: 374 VTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 433

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+  ++    + Y  +I    K+   ++A  L+  M   G+ P+ ITYS++I  + + G 
Sbjct: 434 MRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGN 493

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
           +  A  +  ++  SG+ ++ ++Y T+I  + + G V  A ++   +       +      
Sbjct: 494 IKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNV 553

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            ++ L R G++ EA          G V +   + C+I  +       N    F+ M   G
Sbjct: 554 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 613

Query: 431 YFP 433
             P
Sbjct: 614 QHP 616



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 235/537 (43%), Gaps = 11/537 (2%)

Query: 10  NEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           NE +++  SP+   YN ++        +E A  L D M   G+  +  TY TL+    K 
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421

Query: 68  GMFDSAISWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
             F+ A   L++M   D V G +  Y+ LI+   K     +A+ +   +   G+ PD++ 
Sbjct: 422 EKFELAKRLLERMRVNDMVVGHIA-YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 480

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+++IN F +    K A+ +I  M   G+  + + YSTL+  + ++    EA+ V+A MN
Sbjct: 481 YSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMN 540

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                 D  TCN+++    +     +A++    M ++G+ P+ ++Y+ ++  YG      
Sbjct: 541 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 600

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A   F  M +     +  TY +++K   K     +A   +  +       +++ Y+T++
Sbjct: 601 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 660

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
           A   K+G L  A  LF K+  + V  D   Y +++    R G    A  L          
Sbjct: 661 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 720

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PN +     +  L++AG  + A + F +    G   D   F  +I+  SR  +     +
Sbjct: 721 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 780

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            F  MR  G  P+     ++L+ + K +       LYS M  EG +F D++ F  L L  
Sbjct: 781 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG-IFPDKLTFHSLILGL 839

Query: 482 ARKDFNMLE-SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           ++     L   L  ++  +  +  +   +++   Y  + ++  A  ++N MN    F
Sbjct: 840 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 896



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/517 (22%), Positives = 222/517 (42%), Gaps = 55/517 (10%)

Query: 4   AILDWINEEARYSPS---------------VFAYNVVLRNVLRAKQWELAHGLFDEMRQR 48
            +L+W  ++ RY  +               V  YNV + N+    +   A+ L  +MR+ 
Sbjct: 273 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 332

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
            I+P+  TY+TLI  F KEG    A     +M +  +S + V Y+ LI     + D+ +A
Sbjct: 333 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           + +   ++++G+  + V Y T++N   K + F+ A+ L+E MR   +    ++Y+ L++ 
Sbjct: 393 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             +N    EA+ +   M +     D+ T + +I+ + ++   K A  +   M + G+  +
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            + Y+TL+  + +     EA+ ++ +M       +  T N ++    +  +  +A   + 
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572

Query: 289 EMQNRGIEPNAITYSTIIAIWG-----------------------------------KAG 313
            M   G+ PN+ITY  II  +G                                   K G
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
            L  A     +L      +D V+Y T++    + G +  A  L  ++ Q N +P      
Sbjct: 633 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           + +T L R G+   A  +F  A   G +  +  ++ C+++  S+          FE+M  
Sbjct: 693 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  PD+     +++S  +  +   A+D +S M+  G
Sbjct: 753 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 183/451 (40%), Gaps = 5/451 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL-QQM 80
            YN +L    ++     A  LFD+M Q  + PD YTYS+L+T   ++G   +A+      M
Sbjct: 656  YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 715

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +  +  + V+Y+ L++   K      A   F  +   G  PD VA+N +I+   +    
Sbjct: 716  GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 775

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             +A      MR  GV P+  +Y+ LL+ + +    +  LS+++ M       D  T + +
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 835

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            I    +  +     +L   M   G      ++N L+  Y E+    +A  L   M    +
Sbjct: 836  ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 895

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              +  TYN +     K     ++T ++ EM   G+ P    Y T+I    + G +  A  
Sbjct: 896  FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 955

Query: 321  LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
            L  ++ + G     V    M+      G    A  +L  + +   +P     T L     
Sbjct: 956  LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015

Query: 377  RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            R  +I EA  +       G   D+  +  +I     N   A   E++E+MR     P+  
Sbjct: 1016 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075

Query: 437  IIALVLNSYGKLREFETADDLYSEMQEEGCV 467
              A+++++          + L +++QE G +
Sbjct: 1076 TYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 194/453 (42%), Gaps = 7/453 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            PS F Y  +L+ + +      A    + +     A D   Y+TL+    K G    A++ 
Sbjct: 616  PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 675

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNTMINVFG 135
              +M Q+ V  D   YS+L+    +      A+ +F      G + P+ V Y  +++   
Sbjct: 676  FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 735

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDL 194
            KA   K A    EEM ++G  PDTV+++ +++      + ++A   F+ M     CP +L
Sbjct: 736  KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP-NL 794

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T NI++  + +         L+ +M + GI P  +++++L+    ++ +    + L   
Sbjct: 795  ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGK 854

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            M  +    +  T+N +I  Y +S +  KA +L+  M   G+ P+  TY+ I     K   
Sbjct: 855  MIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 914

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
               + ++  ++  +GV      Y T+I    RVG +  A +L  E+        E A + 
Sbjct: 915  FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 974

Query: 375  LAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            + R     G+ E+A  V         +  I+ F  ++  F R+ K A  +++   M   G
Sbjct: 975  MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
               D     +++       +   A +LY EM+ 
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1067



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 112/522 (21%), Positives = 197/522 (37%), Gaps = 75/522 (14%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y  +L  + + +++ELA  L + MR   +      Y+ LI    K GM D A+  +  M
Sbjct: 410 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 469

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            +D V+ D++ YS+LI    ++ +   A  I  R+  SG+V + + Y+T+I  F +    
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            EA  +   M   G   D  + + L++    + K  EA      M+ +    +  T + +
Sbjct: 530 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 589

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSV------------------------------- 229
           I+ YG +    +A   F  M K G  PS                                
Sbjct: 590 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 649

Query: 230 ----VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
               V YNTLL    ++    EA+ LF  M +  +  +  TY++++    +  +   A  
Sbjct: 650 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 709

Query: 286 LMQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           L      RG + PN + Y+ ++    KAG    A   F+++   G   D V +  +I + 
Sbjct: 710 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 769

Query: 345 ERVGLVAHAKR-------------------LLHELRQ--------------------PNT 365
            R G +  A                     LLH   +                    P+ 
Sbjct: 770 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 829

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   + I  L+++G  +    +  +    G + D   F  +I  +S + K     ++   
Sbjct: 830 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 889

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           M + G FPD      + N   K   F  +  +  EM E G +
Sbjct: 890 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVI 931



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 139/315 (44%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
             P++  YN++L    + +       L+  M + GI PD+ T+ +LI    K G+ D  + 
Sbjct: 791  CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 850

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             L +M  +    D   ++ LI    +     KA  + + + + G+ PD   YN + N   
Sbjct: 851  LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 910

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K   F+E+ +++ EM E GV P    Y TL+N          A  +  EM  +       
Sbjct: 911  KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 970

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              + M+         +DA  +   M +M + P++ ++ TL+  +       EA+ L  +M
Sbjct: 971  AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1030

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +   ++ +VV YN +I     + +   A  L +EM++R + PN  TY+ ++     A  L
Sbjct: 1031 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1090

Query: 316  DRAAMLFQKLRSSGV 330
             +   L   L+  G+
Sbjct: 1091 IQGEKLLTDLQERGL 1105



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 152/362 (41%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P+   Y  ++  + +A   + A   F+EM ++G  PD   ++ +I    + G    A  +
Sbjct: 722  PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 781

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
               M    V  +L  Y+ L+    K     + +S++S +   GI PD + ++++I    K
Sbjct: 782  FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + +      L+ +M  +G   D  +++ L+N Y E+ K  +A  +   MN +    D  T
Sbjct: 842  SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 901

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             N + +   +    +++  +   M + G+ P    Y TL+           A  L   M+
Sbjct: 902  YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 961

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                  + V  + M++      + E A  ++  M    + P   T++T++  + +  K+ 
Sbjct: 962  ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1021

Query: 317  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
             A  L   +   G+++D V Y  +I+     G  A A  L  E+R  +  P  T   +L 
Sbjct: 1022 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081

Query: 377  RA 378
             A
Sbjct: 1082 DA 1083



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 156/411 (37%), Gaps = 58/411 (14%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y    ++  KA+++  A+ ++  + + G+   ++              F   +  +   N
Sbjct: 115 YCLTAHILVKARMYDSAKSILRHLCQMGIGSKSI--------------FGALMDTYPLCN 160

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
            +    DL     +I VY +  M   A   F  +  +G  PSV + N +L    + +   
Sbjct: 161 SIPSVFDL-----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTE 215

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
               LFR M  K I  NV T+N +I         +KA NL+++M+  G  P  +TY+T++
Sbjct: 216 LVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLL 275

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---- 362
             + K G+   A  L   +   G+E D   Y   I         A A  LL ++R+    
Sbjct: 276 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN +   T I    + G+I  A                                    +V
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAA-----------------------------------QV 360

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F +M      P+      ++  +  + +FE A  L   M+  G   ++  +  +L+    
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 420

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
            + F + + L ER+  +  +     + V+     +   L++A +++  M K
Sbjct: 421 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYK 471


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 234/525 (44%), Gaps = 10/525 (1%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W   EA  Y+P V  Y +++  + ++ + + A  + D MR RGI P+ +TY+TLI+    
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
               D A+     ME   V+     Y   I+   KL D  KA+  F ++K  GI+P + A
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            N  +    +    +EA+ +  ++   G+ PD+V+Y+ ++  Y +  +  +A  +  EM 
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
              C  D+   N +ID   +     +A ++F  ++ + + P+VV+YN L+   G+     
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A+ LF  M+      N VT+N ++    K+   + A  +   M      P+ +TY+TII
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE------L 360
               K G+   A   + +++   +  D V   T++    + G V  A +++ E      L
Sbjct: 655 YGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGL 713

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
           +  N +  E    IL  A  IEEA             +D ++   +I +  + KK  +  
Sbjct: 714 QTSNQVWGELMECILIEA-EIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAK 772

Query: 421 EVFEKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           ++F+K  +S G  P       +++        E A  L+ EM+  GC  +   +  +L  
Sbjct: 773 KLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDA 832

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           +G  K  + L  L+  +           H+++     ++N +N A
Sbjct: 833 HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 4/376 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+++ Y + +R + RA + + A+G+   M   G  PD  TY+ LI      G  D A   
Sbjct: 260 PNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKEL 319

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M       DLV Y  L+       D       +S +++ G  PD+V Y  ++    K
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +A  +++ MR +G+ P+  +Y+TL++  +   +  EAL +F  M  +       +
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             + ID YG+L   + A   F  M+K GI PS+ + N  L    E     EA  +F  + 
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  + VTYN M+K Y K+ + +KAT L+ EM + G EP+ I  +++I    KAG++D
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +F +L+   +    V Y  +I    + G +  A  L   +++    PNT+     +
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 373 TILARAGRIEEATWVF 388
             L +   ++ A  +F
Sbjct: 620 DCLCKNDAVDLALKMF 635



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 217/475 (45%), Gaps = 11/475 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  Y+ ++  + R +       L +EM   G+ P+ YTY+  I   G+ G  D A   
Sbjct: 225 PSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGI 284

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ ME +    D+V Y+ LI+         KA  +++++++S   PDLV Y T+++ FG 
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGN 344

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +  +    EM   G  PD V+Y+ L+    ++ K  +A  +   M       +L T
Sbjct: 345 YGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHT 404

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I     L    +A  LF +M  +G+ P+  SY   +  YG+     +A+  F  M+
Sbjct: 405 YNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMK 464

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ I  ++   N  +    +     +A ++  ++ N G+ P+++TY+ ++  + KAG++D
Sbjct: 465 KRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQID 524

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
           +A  L  ++ S G E D ++  ++I    + G V  A ++   L+     P  +     I
Sbjct: 525 KATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILI 584

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T L + G++ +A  +F    ++G   +   F  +++   +N      +++F +M      
Sbjct: 585 TGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCS 644

Query: 433 PDSHIIALVLNS--YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           PD     L  N+  YG ++E       +   Q +  +  D V    L L G  KD
Sbjct: 645 PD----VLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTL-LPGVVKD 694



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 213/463 (46%), Gaps = 12/463 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A +  + ++YN ++  +L+    + A  ++  M   G+ P   TYS L+   G+     
Sbjct: 185 QAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTG 244

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           + +  L++ME   +  ++  Y+  I +  +      A  I   ++  G  PD+V Y  +I
Sbjct: 245 TIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLI 304

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNEVNC 190
           +    A    +A+ L  +MR    KPD V+Y TL++ +  N+  +E +  F +EM     
Sbjct: 305 DALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKF-GNYGDLETVKRFWSEMEADGY 363

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             D+ T  I+++     G++D A D   +   MR  GI P++ +YNTL+          E
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFD---MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ LF  M+   +     +Y   I  YGK  + EKA +  ++M+ RGI P+    +  + 
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              + G++  A  +F  + + G+  D V Y  M+  Y + G +  A +LL E+     +P
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   + I  L +AGR++EA  +F +  D      +  +  +I    +  K    +++F
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             M+ +G  P++     +L+   K    + A  ++  M    C
Sbjct: 601 GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNC 643



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 214/494 (43%), Gaps = 50/494 (10%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P +   N ++  + +A + + A  +F  ++   +AP   TY+ LIT  GKEG    A+  
Sbjct: 540  PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDL 599

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
               M++     + V ++ L++   K      A+ +F R+      PD++ YNT+I  +G 
Sbjct: 600  FGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII--YG- 656

Query: 137  AKLFKEAR----LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM------- 185
              L KE R           ++ + PD V+  TLL   V++ +  +A+ +  E        
Sbjct: 657  --LIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714

Query: 186  --NEV-----NCPL------------DLTTCN----------IMIDVYGQLDMAKDADRL 216
              N+V      C L            +   CN           +I V  +   A DA +L
Sbjct: 715  TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKL 774

Query: 217  FWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            F    K +G  P+  SYN L+       +   A+ LF  M+      N+ TYN ++  +G
Sbjct: 775  FDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHG 834

Query: 276  KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
            KS   ++   L  EM  RG +PN IT++ II+   K+  +++A  L+ ++ S      P 
Sbjct: 835  KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894

Query: 336  LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
             Y  +I    + G    A ++  E+     +PN       I    +AG +  A  +F++ 
Sbjct: 895  TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
               G   D+  +  ++E      +  + +  FE+++  G  PD+    L++N  GK R  
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 452  ETADDLYSEMQEEG 465
            E A  L+SEM+  G
Sbjct: 1015 EEALSLFSEMKNRG 1028



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 200/439 (45%), Gaps = 9/439 (2%)

Query: 33  KQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLY 92
           +Q   A G   +MRQ G   + Y+Y+ LI    + G    A+   ++M  + +   +  Y
Sbjct: 174 RQAPFALG---KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTY 230

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           S L+    +  D    + +   +++ G+ P++  Y   I V G+A    +A  +++ M +
Sbjct: 231 SALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMED 290

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +G  PD V+Y+ L++      K  +A  ++ +M   +   DL T   ++  +G     + 
Sbjct: 291 EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET 350

Query: 213 ADRLFWS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             R FWS M   G  P VV+Y  L+    ++    +A  +  +M+ + I  N+ TYNT+I
Sbjct: 351 VKR-FWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
                    ++A  L   M++ G+ P A +Y   I  +GK G  ++A   F+K++  G+ 
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
                    + +   +G +  AK + +++      P+++     +   ++AG+I++AT +
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +    G   DI V   +I+   +  +     ++F +++     P      +++   GK
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589

Query: 448 LREFETADDLYSEMQEEGC 466
             +   A DL+  M+E GC
Sbjct: 590 EGKLLKALDLFGSMKESGC 608



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 152/326 (46%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            + D   +     P+  +YN ++  +L     E A  LF EM+  G  P+ +TY+ L+   
Sbjct: 774  LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            GK    D       +M       +++ ++ +I    K +  +KA+ ++  + S    P  
Sbjct: 834  GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              Y  +I    KA   +EA  + EEM +   KP+   Y+ L+N + +      A  +F  
Sbjct: 894  CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKR 953

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            M +     DL +  I+++         DA   F  ++  G+DP  VSYN ++   G++  
Sbjct: 954  MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              EA+ LF  M+ + I   + TYN +I  +G +   ++A  + +E+Q  G+EPN  TY+ 
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073

Query: 305  IIAIWGKAGKLDRAAMLFQKLRSSGV 330
            +I    K+G  DRA  +F+K+   G 
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGC 1099



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 146/295 (49%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            + A   P++F YN++L    ++K+ +    L++EM  RG  P+  T++ +I+   K    
Sbjct: 815  KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A+    ++     S     Y  LI    K     +A+ IF  +      P+   YN +
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            IN FGKA     A  L + M ++G++PD  SY+ L+       +  +A+  F E+     
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              D  + N+MI+  G+    ++A  LF  M+  GI P + +YN L+  +G A +  +A  
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +F  +Q   +E NV TYN +I+ + KS   ++A ++ ++M   G  PNA T++ +
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/494 (22%), Positives = 212/494 (42%), Gaps = 23/494 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ A N  L ++    +   A  +F+++   G++PD  TY+ ++ C+ K G  D A   
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M  +    D+++ ++LI+   K     +A  +F RLK   + P +V YN +I   GK
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  L   M+E G  P+TV+++ LL+   +N     AL +F  M  +NC  D+ T
Sbjct: 590 EGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLT 649

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG--IDPSVVSYNTLL-------RVYGEAELFGE 247
            N +I  YG +   + A   FW   +M   + P  V+  TLL       RV    ++  E
Sbjct: 650 YNTII--YGLIKEGR-AGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            +H   L    ++      +  +++      E E+A +  + +    I  +      +I 
Sbjct: 707 FVHQSGLQTSNQV------WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIR 760

Query: 308 IWGKAGKLDRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           +  K  K   A  LF K  +S G    P  Y  ++       +   A +L  E++     
Sbjct: 761 VLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P      +L     ++ RI+E   ++ +    G   +I     +I    ++      +++
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           + ++ S  + P       ++    K    E A  ++ EM +  C  +  ++  +++ +G 
Sbjct: 881 YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940

Query: 483 RKDFNMLESLFERL 496
             + N+   LF+R+
Sbjct: 941 AGNVNIACDLFKRM 954



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 209/460 (45%), Gaps = 13/460 (2%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            SP V  YN ++  +++  +   A   + +M++  ++PD  T  TL+    K+G  + AI 
Sbjct: 644  SPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIK 702

Query: 76   WLQQ-MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + + + Q  +     ++  L+E     ++  +AIS    L  + I  D      +I V 
Sbjct: 703  IVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVL 762

Query: 135  GKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K K   +A+ L ++  +  G  P   SY+ L++  +  +    AL +F EM    C  +
Sbjct: 763  CKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPN 822

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIH 250
            + T N+++D +G+   +K  D LF    +M   G  P+++++N ++    ++    +A+ 
Sbjct: 823  IFTYNLLLDAHGK---SKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALD 879

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            L+  +   +      TY  +I    K+   E+A  + +EM +   +PN   Y+ +I  +G
Sbjct: 880  LYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFG 939

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
            KAG ++ A  LF+++   G+  D   Y  ++      G V  A     EL+     P+T+
Sbjct: 940  KAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTV 999

Query: 367  PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                 I  L ++ R+EEA  +F +  + G   ++  +  +I  F          ++FE++
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059

Query: 427  RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            +  G  P+      ++  + K    + A  ++ +M   GC
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 202/447 (45%), Gaps = 25/447 (5%)

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLV----AYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           + +SD + A+S F  +     +P++V      N M+         ++   + + M++Q +
Sbjct: 97  KSISDPNSALSYFKMVSQ---LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVI 153

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
             +  +Y T+           +A     +M +    L+  + N +I    Q    K+A +
Sbjct: 154 NRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           ++  M   G+ PS+ +Y+ L+   G     G  + L   M+   +  N+ TY   I++ G
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           ++   + A  +++ M++ G  P+ +TY+ +I     AGKLD+A  L+ K+R+S  + D V
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQA 391
            Y T++  +   G +   KR   E+      P     TI    L ++G++++A  +    
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G V ++  +  +I      ++    +E+F  M S G  P ++   L ++ YGKL + 
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453

Query: 452 ETADDLYSEMQEEG-------CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINK 504
           E A D + +M++ G       C  S     +M  +  A+  FN + +     DS +    
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVT---- 509

Query: 505 KELHHVVAGIYERANRLNDASRIMNRM 531
              ++++   Y +A +++ A++++  M
Sbjct: 510 ---YNMMMKCYSKAGQIDKATKLLTEM 533



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 63/116 (54%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   +YN+++  + ++++ E A  LF EM+ RGI+P+ YTY+ LI  FG  GM D A   
Sbjct: 996  PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             ++++   +  ++  Y+ LI    K  +  +A S+F ++   G  P+   +  + N
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 227/473 (47%), Gaps = 6/473 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   +++++R     K+ + A   FD M+++G+ P   T++ +++ F K    ++     
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M + ++   +  ++ +I +  K     KA      +++ G+ P++V YNT+I+ +   
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + AR++++ M+ +GV+PD+ +Y +L++   +  K  EA  +  +M E+       T 
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 198 NIMIDVY-GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           N +ID Y  + D+ K A      M +  I P+V +YN L+          EA  + + M 
Sbjct: 345 NTLIDGYCNKGDLVK-AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I  + +TYN +I  Y +    +KA NL  EM ++GI+P  +TY+++I +  K  ++ 
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A  LF+K+   G   D +++  +I  +   G +  A  LL E+ + N +P E     L 
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLM 523

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R G++EEA  + ++    G   D   +  +I  +S+     +   + ++M S G+ 
Sbjct: 524 QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFN 583

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           P       ++    K ++ + A++L  EM  +G    D  +F ++   G   D
Sbjct: 584 PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 208/453 (45%), Gaps = 10/453 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P +  +N +L   L+  Q E    L+ EM +  I    YT++ +I    KEG  
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKL 252

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A  ++  ME   V  ++V Y+ +I           A  +   +K+ G+ PD   Y ++
Sbjct: 253 KKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSL 312

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    +EA  ++E+M+E G+ P  V+Y+TL++ Y      V+A     EM     
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
              ++T N++I      G++D   +AD +   M   GI P  ++YN L+  Y       +
Sbjct: 373 LPTVSTYNLLIHALFLEGKMD---EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKK 429

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A +L   M  K I+  +VTY ++I +  K    + A +L +++   G  P+ I ++ +I 
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
                G LDRA  L +++    +  D V Y T++    R G V  A+ LL E++    +P
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T I+  ++ G I +A  +  +    G    +  +  +I+   +N++     E+ 
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           ++M S G  PD      ++   GK+ +   A D
Sbjct: 610 KEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 170/403 (42%), Gaps = 6/403 (1%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           +++  LI    +L     A   F  +K  G+VP +  +N M+++F K    +   +L  E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M    +K    +++ ++N+  +  K  +A      M  +    ++ T N +I  Y     
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  +   M+  G++P   +Y +L+    +     EA  +   M+   +    VTYNT
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  Y    +  KA     EM  R I P   TY+ +I      GK+D A  + + +  SG
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEAT 385
           +  D + Y  +I  Y R G    A  L  E+     QP  +   + I +L++  R++ A 
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F +    G   D+ +F  +I+    N        + ++M      PD      ++   
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFN 487
            +  + E A +L  EM+  G +  D + +  ++S Y  R D N
Sbjct: 527 CREGKVEEARELLKEMKRRG-IRPDHISYNTLISGYSKRGDIN 568



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 193/432 (44%), Gaps = 10/432 (2%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+++ SR  S      L+       V G   +F E  +  + +   G K  ++ +  L+ 
Sbjct: 119 AVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRL---GTK-SSIVFDMLIR 174

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              E  +  +A   F  M E      + T N M+ ++ +L+  +    L+  M ++ I  
Sbjct: 175 ACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKS 234

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V ++N ++ V  +     +A      M+   ++ NVVTYNT+I  Y      E A  ++
Sbjct: 235 TVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVL 294

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M+NRG+EP++ TY ++I+   K GKL+ A+ + +K++  G+    V Y T+I  Y   
Sbjct: 295 DIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK 354

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVF 403
           G +  A     E+ +   +P  +   +L  A    G+++EA  + +   D+G V D   +
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I  + R         + ++M S G  P       ++    K    + ADDL+ ++  
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474

Query: 464 EGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
           EG    D + F  ++  + A  + +   +L + +D  + +  +  ++ +     R  ++ 
Sbjct: 475 EG-ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 523 DASRIMNRMNKR 534
           +A  ++  M +R
Sbjct: 534 EARELLKEMKRR 545


>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 903

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 217/519 (41%), Gaps = 56/519 (10%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L ++ E     P V  YN+V+    +A Q E A  +F EM + GI PD  +++T I+  
Sbjct: 322 LLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISAC 381

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNL----------------------------- 95
           G  G+ + A+S  ++ME+  V  +++ ++ +                             
Sbjct: 382 GSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANG 441

Query: 96  ----------IELARKLS------------DYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                     +E+A   S             + +A+S+   +   G+ P +++YNT+I+ 
Sbjct: 442 GGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISA 501

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            GK     +A  L+ EM E+G+ PD +++++ +     + +  +A+ +  EM       D
Sbjct: 502 CGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAAD 561

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T +  +         + A  L   M+  G+ P+V+ Y   +R  GEA    EA+ L R
Sbjct: 562 AITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLR 621

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    +  N+ +Y+  I   GK    E+   L+ EM   G+ PN   Y+  I   G  G
Sbjct: 622 EMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGG 681

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTIPR 368
           + +RA   F+ + +SG++   V Y + + A    G V  A  LL E++     +PN    
Sbjct: 682 QWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTY 741

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I      G+      V R    AG    ++ +   I        ++    +  +M +
Sbjct: 742 AAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEA 801

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           AG  P        + + GK  +++ A DL  EM  +G V
Sbjct: 802 AGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLV 840



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 210/477 (44%), Gaps = 23/477 (4%)

Query: 12  EARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           EA Y   P+   Y   ++   R  + + A  L  EM+  G+      YS +   F +   
Sbjct: 221 EAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDH 280

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIVPDLVAYN 128
           + +A S L+++    V  ++  Y+  I       ++ +A+ +   ++   G+ PD+V YN
Sbjct: 281 WQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYN 340

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++   GKA   ++A  +  EM E G+KPD +S++T ++         EALS+F EM   
Sbjct: 341 IVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERA 400

Query: 189 NCPLDLTTCNIMIDVY---GQLDMAKD------------ADRLFWSMRKMGID-PSVVSY 232
               ++ T N ++      GQ + A D                        ++     SY
Sbjct: 401 GVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSY 460

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NT L      E +G A+ L R M ++ ++  V++YNT+I   GK  E ++A  L++EM  
Sbjct: 461 NTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPE 520

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           RG+ P+ IT+++ IA    +G+ D A  L +++  +GV  D + Y + +      G    
Sbjct: 521 RGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQ 580

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  LL E++     P  I    AI     AG+ +EA  + R+   AG   ++  +   I 
Sbjct: 581 ALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATIS 640

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              ++ ++   + +  +M + G  P+       +   G   ++E A   +  M   G
Sbjct: 641 ACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASG 697



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 204/470 (43%), Gaps = 22/470 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S F Y+  +  + +  +W  A  +   M + G  P+ Y  +  +   GK G    A+  +
Sbjct: 123 STFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLM 182

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFGK 136
           +      +  D+V Y+  I       D+  A+S+   +++  GI P+ + Y   I V G+
Sbjct: 183 RDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGR 242

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L+ EM++ GV   T  YS + N +     +  A S   E+++     ++  
Sbjct: 243 CGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFN 302

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N+ I         ++A  L   MR++G ++P VV+YN ++   G+A    +AI +FR M
Sbjct: 303 YNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREM 362

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               I+ +V+++ T I   G     E+A ++ +EM+  G+ PN IT++ +++    AG+ 
Sbjct: 363 SEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQW 422

Query: 316 DRAAMLFQKL---------------RSSGVEI-DPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + A   F ++                   VE+ D   Y T + A E       A  LL +
Sbjct: 423 EEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRD 482

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +     +P  I   T I+   + G  ++A  + R+  + G + D+  F   I   S + +
Sbjct: 483 MPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGR 542

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             + + +  +M  AG   D+   +  L        +E A  L  EMQ  G
Sbjct: 543 PDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAG 592



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 164/387 (42%), Gaps = 50/387 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN V+    +  + + A  L  EM +RG+ PD  T+++ I      G  D A+  
Sbjct: 490 PVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRL 549

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +  V+ D + YS+ +        + +A+S+   ++ +G+ P ++ Y   I   G+
Sbjct: 550 MREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGE 609

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-------NEVN 189
           A    EA LL+ EM   GV P+  SYS  ++   ++ ++ + L++  EM       NE  
Sbjct: 610 AGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFC 669

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV---YGEAELF- 245
               +T C I     GQ + A      F SM   GI P+VV Y + +      GE +L  
Sbjct: 670 YTAAITGCGI----GGQWERAV---ATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLAL 722

Query: 246 ----------------------------GEAIHLFRLMQR----KEIEQNVVTYNTMIKI 273
                                       G   HL   +QR      I   +  Y + I+ 
Sbjct: 723 ELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRA 782

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            G+     +AT+L+ EM+  G+ P    Y+  I   GK+GK   A  L  ++   G+  D
Sbjct: 783 SGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRD 842

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHEL 360
                  I A ++ G    A  L+ E+
Sbjct: 843 SGTLSAAISACQKAGRGVKAAGLVEEM 869



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 11/329 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +     Y+  L  +  A +WE A  L  EM+  G++P    Y+  I   G+ G  D 
Sbjct: 556 AGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDE 615

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L++M    V+ +L  YS  I    K   + + +++ + + + G+ P+   Y   I 
Sbjct: 616 ALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAIT 675

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-- 190
             G    ++ A      M   G++P  V Y++ ++      +   AL + +EM E     
Sbjct: 676 GCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIE 735

Query: 191 PLDLTTCNIMIDVY--GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           P + T   +++     GQ  +     R    M   GI P +  Y + +R  GE   + EA
Sbjct: 736 PNEQTYAAVILACGNGGQGHLVAQVQR---DMASAGITPRLTGYLSAIRASGECGNWSEA 792

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L   M+   +   V  YN  I   GKS + ++A +L+ EM  +G+  ++ T S  I+ 
Sbjct: 793 TSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISA 852

Query: 309 WGKAGKLDRAAMLFQKL----RSSGVEID 333
             KAG+  +AA L +++    R  G E D
Sbjct: 853 CQKAGRGVKAAGLVEEMLEMAREKGGERD 881



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 144/335 (42%), Gaps = 13/335 (3%)

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA+L  E R      +       T  YS  ++   +  ++ EAL + A M E+    +  
Sbjct: 102 KAEL-AEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSY 160

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGEAIHLF 252
             N  +D  G+    ++A  L    R  GI+  VVSYN  +      G+ EL   A+ + 
Sbjct: 161 CVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWEL---ALSMI 217

Query: 253 RLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           R M+ +  I+ N +TY   IK+ G+  + ++A +L+ EM++ G+      YS +   + +
Sbjct: 218 REMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRR 277

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTI 366
                 AA   +++    V+ +   Y   I      G    A  LLH +R     +P+ +
Sbjct: 278 VDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVV 337

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +    +AG+ E+A  +FR+  + G   D+  F   I            + +F +M
Sbjct: 338 TYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREM 397

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
             AG  P+      V+++     ++E A D ++E+
Sbjct: 398 ERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEV 432



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  + EEA   P+   Y  V+       Q  L   +  +M   GI P    Y + I   
Sbjct: 724 LLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRAS 783

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
           G+ G +  A S L +ME   V   +  Y+  I    K   + +A+ +   +   G+V D 
Sbjct: 784 GECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDS 843

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEM----REQGVKPDTV 160
              +  I+   KA    +A  L+EEM    RE+G + D++
Sbjct: 844 GTLSAAISACQKAGRGVKAAGLVEEMLEMAREKGGERDSL 883


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 189/397 (47%), Gaps = 39/397 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   SP+V  Y  ++    +     LA  LF +M + G+ P+ +TYS L+  F K+G  
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQG-- 242

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                 LQ+                           +   ++  +K SGIVP+  AYN +
Sbjct: 243 ------LQR---------------------------EGFQMYENMKRSGIVPNAYAYNCL 269

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ +    +  +A  +  EMRE+G+    ++Y+ L+       KF EA+ +  ++N+V  
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T NI+I+ +  +     A RLF  ++  G+ P++V+YNTL+  Y + E    A+ 
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M+ + I  + VTY  +I  + +    EKA  +   M+  G+ P+  TYS +I    
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
             G +  A+ LF+ L    ++ + V+Y TMI  Y + G    A RLL+E+      PN  
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
              + I +L R  + +EA  +  Q  ++G    +S++
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 215/449 (47%), Gaps = 14/449 (3%)

Query: 29  VLRAKQWELAHGLFDEMRQRGIAPD-RYT--YSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           +LR     +   L  ++ Q    P   YT  Y T++  +      D A+++L  M  +  
Sbjct: 61  ILRLISGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHE-- 118

Query: 86  SGDLVL---YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
            G + L   ++NL+ L  + + + KA  IF+ LKS  +V D  ++  MI    +A  F +
Sbjct: 119 -GHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVK 176

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
              L+  + E G+ P+ V Y+TL++   +    + A ++F +M+ +    +  T +++++
Sbjct: 177 GFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMN 236

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            + +  + ++  +++ +M++ GI P+  +YN L+  Y    +  +A  +F  M+ K I  
Sbjct: 237 GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIAC 296

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            V+TYN +I    +  +  +A  L+ ++   G+ PN +TY+ +I  +   GK+D A  LF
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF 356

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARA 378
            +L+SSG+    V Y T+I  Y +V  +A A  L+ E+ +    P +   TIL    AR 
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
              E+A  +      +G V D+  +  +I     +       ++F+ +      P+S I 
Sbjct: 417 NYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIY 476

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCV 467
             +++ Y K      A  L +EM   G V
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMV 505



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 158/325 (48%), Gaps = 6/325 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+V++    +         +++ M++ GI P+ Y Y+ LI+ +   GM D A   
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  ++  ++ Y+ LI    +   + +A+ +  ++   G+ P++V YN +IN F  
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L  +++  G+ P  V+Y+TL+  Y +      AL +  EM E        T
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL---LRVYGEAELFGEAIHLFR 253
             I+ID + +L+  + A  +   M K G+ P V +Y+ L   L V+G  +   EA  LF+
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMK---EASKLFK 462

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +    ++ N V YNTMI  Y K     +A  L+ EM + G+ PN  ++ + I +  +  
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDE 522

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQ 338
           K   A +L  ++ +SG++    LY+
Sbjct: 523 KWKEAELLLGQMINSGLKPSVSLYK 547



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAI 74
           P+ +AYN ++         + A  +F EMR++GIA    TY+ LI   C GK+  F  A+
Sbjct: 261 PNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK--FGEAV 318

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + ++ +  +S ++V Y+ LI     +     A+ +F++LKSSG+ P LV YNT+I  +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +    A  L++EM E+ + P  V+Y+ L++ +   +   +A  + + M +     D+
Sbjct: 379 SKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDV 438

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T +++I    V+G +   K+A +LF S+ +M + P+ V YNT++  Y +      A+ L
Sbjct: 439 YTYSVLIHGLCVHGNM---KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
              M    +  NV ++ + I +  +  + ++A  L+ +M N G++P+   Y  +  + G
Sbjct: 496 LNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/506 (21%), Positives = 218/506 (43%), Gaps = 46/506 (9%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           LF+    +G+    ++ S ++      GM   A S + ++   R+   L+L         
Sbjct: 25  LFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLML--------- 75

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLV---AYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                        +L  +   P L     Y+T++N +  +    +A   +  M  +G  P
Sbjct: 76  -------------QLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVP 122

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
            + +++ L+ L + ++ F +A  +F E+      LD  +  IMI    +        RL 
Sbjct: 123 LSNTFNNLMCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCEAGYFVKGFRLL 181

Query: 218 WSMRKMGIDPSVVSYNTLLR---VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             + + G+ P+VV Y TL+     YG   L   A +LF  M R  +  N  TY+ ++  +
Sbjct: 182 AMLEEFGLSPNVVIYTTLIDGCCKYGNVML---AKNLFCKMDRLGLVPNPHTYSVLMNGF 238

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K     +   + + M+  GI PNA  Y+ +I+ +   G +D+A  +F ++R  G+    
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGV 298

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           + Y  +I    R      A +L+H++ +    PN +     I      G+++ A  +F Q
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ 358

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
              +G    +  +  +I  +S+ +  A  +++ ++M      P      ++++++ +L  
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNY 418

Query: 451 FETADDLYSEMQEEGC---VFSDQVHFQMLSLYGARKDFN-MLESLFE-RLDSDSNINKK 505
            E A +++S M++ G    V++  V    L ++G  K+ + + +SL E  L  +S I   
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478

Query: 506 ELHHVVAGIYERANRLNDASRIMNRM 531
            +H      Y +      A R++N M
Sbjct: 479 MIHG-----YCKEGSSYRALRLLNEM 499



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 117/226 (51%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN+++       + + A  LF++++  G++P   TY+TLI  + K      A+ 
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++ME+  ++   V Y+ LI+   +L+   KA  + S ++ SG+VPD+  Y+ +I+   
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                KEA  L + + E  ++P++V Y+T+++ Y +      AL +  EM       ++ 
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           +    I +  + +  K+A+ L   M   G+ PSV  Y  + +V G+
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGD 555



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/397 (20%), Positives = 163/397 (41%), Gaps = 44/397 (11%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS-IFSRLKSSGIVPDLVAYNTMI 131
           A+  +Q+M +   +  L+L++      + L   S +IS I + L SSG++P      ++I
Sbjct: 7   ALILIQKMVKVPPTKALLLFNT--ATYQGLQHTSHSISFILNHLLSSGMLPQA---QSLI 61

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNC 190
                 ++     L + +         T  Y T++N YV +H   +AL+    M +E + 
Sbjct: 62  LRLISGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHV 121

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR--KMGIDPSVVSYNTLLRVYGEAELFGEA 248
           PL  T  N+M      L  +   D+ +W     K  +     S+  +++   EA  F + 
Sbjct: 122 PLSNTFNNLMC----LLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKG 177

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L  +++   +  NVV Y T+I    K      A NL  +M   G+ PN  TYS ++  
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNG 237

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
           + K G       +++ ++ SG+  +   Y  +I  Y                        
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY------------------------ 273

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                     G +++A  VF +  + G    +  +  +I    R KK+   +++  K+  
Sbjct: 274 -------CNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  P+     +++N +  + + +TA  L+++++  G
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 227/457 (49%), Gaps = 7/457 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R +P++  YN+VLR++      + A  LFD +R+R +APD  TYSTL+    K+   D A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHA 212

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMIN 132
           +  L +M +  V  D+V Y+ L+    K  ++ K + ++ +L K  G  P+L  YN M++
Sbjct: 213 LDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K   FKE   + E M    ++PD ++Y  L++    +     A  V++E+ +    +
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    N ++  + Q    ++A + FW         ++ +YN +++   ++ +  EAI L+
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 253 RLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            L+++      + VT+ T+I    ++    KA  + +E +  G + +  +YS++I     
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+L  A  +++K+   G + +  +Y  +I  + +V   + A R+  ++      P  I 
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  L +A + +EA+ V R+  + G   DI+ +G +I     +KK  + + +++++ 
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
             G   D  +  ++++      + + A  ++S+M+E+
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 204/443 (46%), Gaps = 18/443 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ----RGIAPDRYTYSTLITCFGKEGMFD 71
           +P + ++N +L   +RA+++  A   F  +      R IAP+  TY+ ++      G  D
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++    + + +V+ D + YS L+    K      A+ +   +  SG+ PD+V YN ++
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235

Query: 132 NVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
               KA  F++  R+  + +++ G +P+  +Y+ +L+   +  +F E   V+  M   N 
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNL 295

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T  I+I    +      A R++  + K G+      YN+L++ + +A    EA  
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK 355

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYSTIIAIW 309
            +       + +N+ TYN MIK    S   ++A  L   ++ +    P+ +T+ T+I   
Sbjct: 356 FWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
            + G  ++A  +F++ R SG ++D   Y +MI     VG +  A ++  ++     +PN+
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 I+   +  R  +A  ++ +  D G    +  +  +I+   + +KY     V  +
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 426 MRSAGYFPDSHIIALVLNSYGKL 448
           M   G+ PD       + +YG L
Sbjct: 535 MVENGFTPD-------ITTYGSL 550



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 150/306 (49%), Gaps = 1/306 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D + ++    P    +  ++  + +      A  +F+E R  G   D ++YS++I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                 G    A+   ++M++D    +  +Y+ LI    ++   S A+ I+S++  +G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P ++ YNT+I+   KA+ ++EA  +  EM E G  PD  +Y +L+     + K  +ALS+
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR-KMGIDPSVVSYNTLLRVYG 240
           + ++      +D+   NI+I          +A  +F  M+ K    P++V+YNTL+    
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLY 626

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E     +A  L+  +    +E ++++YNT IK         +   L+ E+ +RGI P  I
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686

Query: 301 TYSTII 306
           T++ ++
Sbjct: 687 TWNILV 692



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 175/359 (48%), Gaps = 3/359 (0%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +++   +A + + A   +D     G+   R TY+ +I      GM D AI     +E
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR-TYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 82  QDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +D     D V +  LI    +    +KA +IF   + SG   D+ +Y++MIN        
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +A  + E+M + G KP++  Y+ L++ + + ++  +A+ ++++M +  C   + T N +
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID   + +  ++A  +   M + G  P + +Y +L+R     +   +A+ +++ +  K +
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           + +V+ +N +I     + + ++A ++  +M + +   PN +TY+T++    + G +D+AA
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
            L+  +   G+E D + Y T I        +    +LL E+     IP      IL RA
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 183/399 (45%), Gaps = 11/399 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y +++  + R+   + A  ++ E+ + G+  D   Y++L+  F + G    A  W
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA--W 354

Query: 77  LQQMEQDRVSG--DLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINV 133
            +  +    +G  +L  Y+ +I+         +AI ++  L K    +PD V + T+I+ 
Sbjct: 355 -KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHG 413

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +     +A  + EE R  G + D  SYS+++N      + V+A+ V+ +M++  C  +
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN 473

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
               N +I  + Q+    DA R++  M   G  P+V++YNTL+    +AE + EA  + R
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M       ++ TY ++I+      + + A ++ +++  +G++ + + ++ +I     AG
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 314 KLDRAAMLFQKLR-SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           K+D A  +F  ++       + V Y T++      G +  A  L   +     +P+ I  
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            T I  L    RI E   +  +    G +  +  +  ++
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/416 (21%), Positives = 177/416 (42%), Gaps = 51/416 (12%)

Query: 102 LSDYSKAI------SIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           LS +S+AI        F  L S  G  P + ++N +++ F +A+ F +A      +    
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGA 149

Query: 155 ----VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
               + P+  +Y+ +L           A+++F  +       D  T + ++    + D  
Sbjct: 150 FGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRL 209

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNT 269
             A  L   M + G+ P VV YN LL    +A  F + + ++ +L++      N+ TYN 
Sbjct: 210 DHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M+    K    ++   + + M    ++P+ ITY  +I    ++G +D AA ++ ++  +G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRL--------LHELRQ------------------- 362
           + ID  +Y +++  + + G V  A +         L  LR                    
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389

Query: 363 ------------PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
                       P+T+   T I  L + G   +A  +F +A  +G+  D+  +  MI   
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
               +  + ++V+EKM   G  P+SHI   +++ + ++     A  +YS+M + GC
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505


>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/466 (22%), Positives = 207/466 (44%), Gaps = 39/466 (8%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + I +WI  ++ + P V  YN+++    +   ++     + E+ +    P   TY+ L+ 
Sbjct: 139 ILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLK 198

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            + K G+ +                                   KA ++F+ ++  G+ P
Sbjct: 199 AYCKSGLLE-----------------------------------KAEAVFAEMRKYGLSP 223

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
             + YN  I+   K     +A  +   M+  G +P T +Y+ L+N+Y +  K   A ++F
Sbjct: 224 SAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIF 283

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM    C  ++ T   +++   +  + + A+ +F  M++ G +P V +YN L+  Y  A
Sbjct: 284 DEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRA 343

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
                A  +F LMQ    E +  +YN M+  YG++  HE A  + +EM+  GI P   ++
Sbjct: 344 GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSH 403

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             +++ +  AG + +   +  ++  SG++ D  +  +M+  Y R+G     + L   +++
Sbjct: 404 MLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQK 463

Query: 363 -PNTIPRET---AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
            P      T    I +  RAG +E    +F+         D+  +   I  +SR K Y  
Sbjct: 464 GPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 523

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +E+FEKM  AG +PD     ++L++     + E   ++   M ++
Sbjct: 524 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 168/353 (47%), Gaps = 4/353 (1%)

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M +   +PD + Y+ L++ Y +   + +  S + E+ E +C     T  +++  Y +  +
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A+ +F  MRK G+ PS + YN  +    +     +A+ +F  M+R   +    TY  
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I +YGK  +   A N+  EM+ +  +PN  T++ ++    + G  ++A  +F++++ +G
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT 385
            E D   Y  ++ +Y R G    A  +   ++     P   +  I+     RAG  E+A 
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 385

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VF +    G    +     ++  +S     A   ++  +M  +G  PD+ ++  +LN Y
Sbjct: 386 AVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLY 445

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           G+L +F   +DL+S MQ+  C      +  ++++YG       +E LF+ L +
Sbjct: 446 GRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPA 498



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 150/351 (42%), Gaps = 8/351 (2%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           P   +T + +I V  QL + K    +     W M K    P V+ YN L+  YG+  L+ 
Sbjct: 113 PATNSTWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYK 172

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +    +  +          TY  ++K Y KS   EKA  +  EM+  G+ P+AI Y+  I
Sbjct: 173 DVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYI 232

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
               K G   +A  +F +++  G +     Y  +I  Y +      A+ +  E+R    +
Sbjct: 233 DGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCK 292

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN       +  LAR G  E+A  +F Q  +AG   D+  +  ++E +SR        E+
Sbjct: 293 PNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEI 352

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F  M+  G  PD     +++++YG+    E A  ++ EM+  G   + + H  +LS Y +
Sbjct: 353 FSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSS 412

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             +    E +  ++          + + +  +Y R  +      + + M K
Sbjct: 413 AGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQK 463


>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
 gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
          Length = 492

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 191/398 (47%), Gaps = 4/398 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L  +M+  G+ P    Y+ LI    + G    A + L +M +  +  D   Y+ L+E   
Sbjct: 73  LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             +    A  +  ++   G+  +   Y  ++N + +A   +++  ++ EM+ +G++ DT 
Sbjct: 133 STAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTA 192

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            YSTL+ LY +N  + +A  +  EM E+   LD+   N +ID +G+     DA ++F  M
Sbjct: 193 GYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKM 252

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G+ P + ++N+L+R +        A+  F  MQ + +  +   + T+I   G+  + 
Sbjct: 253 CAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKW 312

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++   L   M+NRG++ +   Y+ ++ I+G+ G    A      L++  +++ P ++  +
Sbjct: 313 DEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVL 372

Query: 341 IVAYERVGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
             AY + GL      +L     E  +PN +     I     AGR  EA  V +   D+G 
Sbjct: 373 ANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGM 432

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             D+  +  +++ F R KK+  V EV+++M  AG  PD
Sbjct: 433 SPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPD 470



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 163/359 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L  +L      LA  L  +M   G+A +R TY  L+  + + G  + +   
Sbjct: 119 PDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWV 178

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M++  +  D   YS L+ L R    + KA  +   ++  G+  D+  YN +I+ FGK
Sbjct: 179 LGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGK 238

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +AR + ++M  +GVKPD  ++++L+  +        AL  FA M E     D   
Sbjct: 239 YGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKI 298

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I   G+     +  +LF  MR  G+  S   Y  L+ +YG+   F +A      ++
Sbjct: 299 FVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALK 358

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + ++ +   +  +   Y +    E+  N++Q M+  GIEPN +  + +I  +G AG+  
Sbjct: 359 AENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHL 418

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            A  + Q ++ SG+  D V Y T++ A+ R         +  E+      P   A  +L
Sbjct: 419 EALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREML 477



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/404 (21%), Positives = 173/404 (42%), Gaps = 39/404 (9%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           SD + ++ + + ++++G+ P   AY  +I    +A    EA  L+ EMR  G++PD   Y
Sbjct: 65  SDLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHY 124

Query: 163 ST-----------------------------------LLNLYVENHKFVEALSVFAEMNE 187
           +                                    LLN Y    +  ++  V  EM  
Sbjct: 125 NALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKR 184

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
               LD    + ++ +Y    M K A  L   M+++G++  V  YN L+  +G+     +
Sbjct: 185 RGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLAD 244

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  M  + ++ ++ T+N++I+ + +    ++A      MQ  G+ P+   + TII+
Sbjct: 245 ARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIIS 304

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             G+ GK D    LF  +R+ G++    +Y  ++  Y + G    A   +  L+  N   
Sbjct: 305 RLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQL 364

Query: 368 RETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             +   +LA A    G  E+   V +     G   ++ +   +I  F    ++   + V 
Sbjct: 365 SPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVL 424

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + ++ +G  PD      ++ ++ + ++FE   ++Y EM+  GC 
Sbjct: 425 QHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCT 468



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 121/276 (43%), Gaps = 4/276 (1%)

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           RL   M+  G+ PS  +Y  L+R    A    EA  L   M+R  +  +   YN +++  
Sbjct: 72  RLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGL 131

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             +     A  L+ +M + G+  N  TY  ++  + +AG+L+ +  +  +++  G+ +D 
Sbjct: 132 LSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQ 390
             Y T++  Y   G+   A  L+ E+++     +       I    + G++ +A  VF +
Sbjct: 192 AGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDK 251

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
               G   DI+ +  +I    R       +  F  M+  G +PD  I   +++  G+  +
Sbjct: 252 MCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGK 311

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           ++    L+  M+  G   S  V+  ++ +YG    F
Sbjct: 312 WDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHF 347


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 211/484 (43%), Gaps = 74/484 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +   N +L+ +    Q  +A   FD M + G +P+  T+STLI  + KE   D A S 
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 77  LQQMEQDRVSGDLVLYSNLIE------------------LAR-----------------K 101
              M +  +  DLV+YS LI                   LAR                 +
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + D  KAI +++R+   GI P++V Y+ +IN   +     EA  +  ++ +QG++P  ++
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS+L++ + ++    +   ++  M       D+  C+++I+   +  M  +A R F+   
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 222 KMGID-----------------------------------PSVVSYNTLLRVYGEAELFG 246
           K G+                                    P VV+Y  L++   E     
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA+ LF  + +K    + + Y T+I  + K  +      + + MQ+ GI P+   Y+ +I
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
            ++ + G ++    L +++   G+E D V Y TMI  Y  + + + A +L   L+    Q
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ 657

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN I     I    + GR+++A  +F    + G   +I  + C+I+ + + +   +  E+
Sbjct: 658 PNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFEL 717

Query: 423 FEKM 426
           +EKM
Sbjct: 718 YEKM 721



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 193/430 (44%), Gaps = 32/430 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  Y+ ++    +++      GL+  M ++G  PD    S LI    ++GM D A+ +
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q  +  ++ +  L++ LI+   +L      + ++  +    ++PD+V Y  ++    +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L  ++ ++G  PD + Y TL++ + +       L +F  M       D+  
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I+++ +    ++   L   + K G++P +V+YNT++  Y   ++F +AI LF +++
Sbjct: 593 YNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               + N +T+  +I  Y K    + A  +   M  RG EPN +TYS +I  + K    +
Sbjct: 653 CGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L++K+                   +RV               PN +     I  L 
Sbjct: 713 SAFELYEKMLG-----------------DRV--------------SPNIVSYSILIDGLC 741

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA+  F+ A     + D+  +G +I  + +  + A  + +++ M   G  PD  
Sbjct: 742 KKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD- 800

Query: 437 IIALVLNSYG 446
           ++   L  YG
Sbjct: 801 LLQKALAEYG 810



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 4/431 (0%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A   F  +  SG  P+LV ++T+INV+ K     EA  L   M E+G+ PD V YS L+N
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
                 K  E  S+F+        +D+   + ++D Y ++     A  ++  M K GI P
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+Y+ L+          EA  +F  + ++ +E +V+TY+++I  + KS        L 
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M  +G  P+ +  S +I    + G +D A   F +    G+ ++  L+  +I    R+
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVF 403
                  ++   +     IP     T+L +     GR++EA  +F Q    G   D  ++
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+ F + +  A  +++F+ M+S G FPD  I  +++N + +    E   +L  E+ +
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
            G       +  M+  Y + K F+    LFE L             ++   Y +  R++D
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 524 ASRIMNRMNKR 534
           A  I + M +R
Sbjct: 679 AMLIFSSMLER 689



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 115/241 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP    Y  ++    + +       +F  M+  GI PD   Y+ LI  F +EG  ++ +
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+++ +  +  D+V Y+ +I     L  +SKAI +F  LK     P+ + +  +I+ +
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAY 670

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +A L+   M E+G +P+ ++YS L++ Y +      A  ++ +M       ++
Sbjct: 671 CKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNI 730

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + +I+ID   +  + ++A   F       + P V++Y  L+R Y +     EA+ L+  
Sbjct: 731 VSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDH 790

Query: 255 M 255
           M
Sbjct: 791 M 791



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R  P+   + +++    +  + + A  +F  M +RG  P+  TYS LI  + K    +S
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    ++M  DRVS ++V YS LI+   K     +A   F       ++PD++AY  +I 
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPD 158
            + K     EA +L + M   G+ PD
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPD 799


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 210/428 (49%), Gaps = 23/428 (5%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           RY  SV + N +L  +++  ++     ++ EM +R I+P+  T++T+I    K G  + A
Sbjct: 190 RYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKA 249

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS---KAISIFSRLKSSGIVPDLVAYNTM 130
              +  M+      ++V Y+ LI+   K+       KA +I   +  + + P+ V +N +
Sbjct: 250 GDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVL 309

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K +    A  + EEM+ QG+KP  V+Y++L+N      K  EA  +  EM   N 
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T N +I+ Y +  + ++A  LF ++ K G+ P+V+++NTLL  Y +     EA  
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL 429

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L ++M  K    N  TYN +I  + +  + E+  NL+ EMQ RG++ + +TY+ +I+ W 
Sbjct: 430 LQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWC 489

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTI 366
           +  +  +AA L  ++   G++   + Y  ++  Y   G +  A    K++  E R  N +
Sbjct: 490 EKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVV 549

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I    R G++E+A  +  +  + G +               N+    +I+  E+M
Sbjct: 550 TYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP--------------NRTTYEIIK--EEM 593

Query: 427 RSAGYFPD 434
              G+ PD
Sbjct: 594 MEKGFLPD 601



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 147/294 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + SP+   +NV++    + +    A  +F+EM+ +G+ P   TY++L+     EG  +
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M    +  +++ Y+ LI    K     +A  +F  +   G+ P+++ +NT++
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + K    +EA LL + M E+G  P+  +Y+ L+  +    K  E  ++  EM      
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T NI+I  + +    K A RL   M   G+ PS ++YN LL  Y        A++L
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            + M+++    NVVTYN +I+ Y +  + E A  L+ EM  +G+ PN  TY  I
Sbjct: 536 RKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 172/355 (48%), Gaps = 7/355 (1%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN---HKFV 176
           I P+L+ +NT+IN   K     +A  ++++M+  G  P+ V+Y+TL++ Y +     K  
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           +A ++  EM E     +  T N++ID + + +    A ++F  M+  G+ P+VV+YN+L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                     EA  L   M    ++ NV+TYN +I  Y K    E+A  L   +  +G+ 
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN IT++T++  + K GK++ A +L + +   G   +   Y  +IV + R G +   K L
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465

Query: 357 LHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           L+E++    + +T+     I+        ++A  +  +  D G       +  ++  +  
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
                  + + ++M   G + +     +++  Y +  + E A+ L +EM E+G +
Sbjct: 526 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 185/383 (48%), Gaps = 7/383 (1%)

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           K   +S + LL+  V+ ++F     V+ EM       +L T N +I+   ++     A  
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE---AIHLFRLMQRKEIEQNVVTYNTMIK 272
           +   M+  G  P+VV+YNTL+  Y +    G+   A  + + M   ++  N VT+N +I 
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            + K      A  + +EMQ++G++P  +TY++++      GKL+ A +L  ++ SS ++ 
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
           + + Y  +I  Y +  L+  A+ L   + +    PN I   T +    + G++EEA  + 
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQ 431

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           +   + G + + S + C+I  F R  K   V  +  +M+  G   D+    ++++++ + 
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
           +E + A  L  EM ++G   S   +  +L+ Y    +     +L ++++ +        +
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 509 HVVAGIYERANRLNDASRIMNRM 531
           +V+   Y R  +L DA+ ++N M
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEM 574


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 224/487 (45%), Gaps = 56/487 (11%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           + RN    + W+L    F EM + G   +    ++L+T   +EG F+     +++M +  
Sbjct: 280 LCRNRKTNRGWDL----FTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRL---KSSG-----IVPDLVAYNTMINVFGK 136
           +  ++V +  LI    K      A+ +  ++   K SG     + PD+V YNT+I+   K
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 137 AKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +E   L+E MR Q G  PDT++Y+ L++ + +  +  +   +F EMN         
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN--------- 446

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                                     K G+ P+VV+ NTL+           A++ F   
Sbjct: 447 --------------------------KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEA 480

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           QR+ ++ + VTY  +I  +      EKA  L  EM   G  P+AI Y T+I+ + +AG++
Sbjct: 481 QRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRM 540

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             A+ +  +L+  G+  D V Y T+I  + R         +L E+ +    P+TI   T 
Sbjct: 541 ADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL 600

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I   ++ G ++ A  V R+   AG V  ++ +G +I  +  N      +E+F+ M++A  
Sbjct: 601 IAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK 660

Query: 432 FPDSHII-ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
            P + +I  +++NS  K  + ++A  L  +M+  G V  +   +   +++   +D   LE
Sbjct: 661 VPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG-VTPNTTTYN--AIFKGLRDEKDLE 717

Query: 491 SLFERLD 497
            +FE +D
Sbjct: 718 KVFEFMD 724



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 176/355 (49%), Gaps = 4/355 (1%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + +++ +  +   +P    YN ++    +A + E    LFDEM + G+AP+  T +TL+ 
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVG 462

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              + G   SA+++  + ++  + GD V Y+ LI     ++++ KA+ +F+ +  SG  P
Sbjct: 463 GMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D + Y T+I+ F +A    +A  ++ E+++ G++PDTV Y+TL+  +   +KF     + 
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM E     D  T N +I    +    K A ++   M K G+ P+V +Y  ++  Y   
Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642

Query: 243 ELFGEAIHLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
               EA+ +F+ M+   ++  N V YN +I    K+ + + A +LM++M+  G+ PN  T
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           Y+ I         L++      ++       D   Y TM +  E +  V   +RL
Sbjct: 703 YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPD---YITMEILTEWLSAVGEIERL 754



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 196/428 (45%), Gaps = 14/428 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A N +L  + R   +   + L ++M +  I P+  T+  LI    K    D A+  L++M
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 81  EQDRVSG--------DLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMI 131
              + SG        D+V+Y+ LI+   K+    + + +  R++S  G  PD + YN +I
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F KA   ++ + L +EM ++GV P+ V+ +TL+       +   A++ F E       
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   +I+ +  ++  + A  LF  M K G  P  + Y TL+  + +A    +A  +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              +++  I  + V YNT+I  + ++ +  +   +++EM+  G++P+ ITY+T+IA   K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTI 366
            G L  A  + +K+  +GV      Y  +I AY   G    A  +  +++      PNT+
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTV 666

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L +  +++ A  +       G   + + +  + +     K    V E  ++M
Sbjct: 667 IYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726

Query: 427 RSAGYFPD 434
                 PD
Sbjct: 727 IEHACNPD 734



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 164/395 (41%), Gaps = 32/395 (8%)

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQG----VKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           N  +++  ++   K+A  +I+EM E       +P+  +   L +  ++  +  E LS   
Sbjct: 194 NVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLS--- 250

Query: 184 EMNEVNCPLDLTTCNIMIDVY------GQLDMAKDADR---LFWSMRKMGIDPSVVSYNT 234
           E   VN  L      ++I  +       +L   +  +R   LF  M K+G      + N+
Sbjct: 251 EDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNS 310

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR- 293
           LL        F     L   M   +I+ NVVT+  +I    K    + A  ++++M    
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370

Query: 294 -------GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYE 345
                   +EP+ + Y+T+I    K G+      L +++RS  G   D + Y  +I  + 
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G +   K L  E+ +    PN +   T +  + R GR+  A   F +A   G   D  
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I  F     +   +E+F +M  +G  PD+ +   +++ + +      A  + +E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           ++ G +  D V +   +L G     N    +FE L
Sbjct: 551 KKLG-IRPDTVCYN--TLIGGFCRTNKFHRVFEML 582


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 214/454 (47%), Gaps = 34/454 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ VL  + ++K ++L   LF  M   GI  D Y+Y+ +I C  +   F 
Sbjct: 3   QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 62

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S + +M +     D+V  S+LI    + +    AI + S+++  G  PD+V YNT+I
Sbjct: 63  IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 122

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K  L  +A  L + M   GV+ D V+Y++L+     + ++ +A  +  +M   +  
Sbjct: 123 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 182

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T   +IDV+ +     +A +L+  M +  +DP V +YN+L+          EA  +
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 242

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM  K    +VVTYNT+I  + KS   ++ T L +EM  RG+  + ITY+TII  + +
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG+ D A  +F ++ S                                  +PN       
Sbjct: 303 AGRPDAAQEIFSRMDS----------------------------------RPNIRTYSIL 328

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +  L    R+E+A  +F     +    DI+ +  +I    +     +  ++F  +   G 
Sbjct: 329 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 388

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD      +++ + + R+++ +D LY +MQE+G
Sbjct: 389 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 207/426 (48%), Gaps = 9/426 (2%)

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q R    +V +S ++    K  +Y   IS+F  ++  GI  DL +YN +IN   +   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           F  A  ++ +M + G +PD V+ S+L+N + + ++  +A+ + ++M E+    D+   N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID   ++ +  DA  LF  M + G+    V+YN+L+     +  + +A  L R M  ++
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  NV+T+  +I ++ K  +  +A  L +EM  R ++P+  TY+++I      G++D A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            +   + + G   D V Y T+I  + +   V    +L  E+ Q     +TI   T I   
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +AGR + A  +F +      ++  S+   ++     N +    + +FE M+ +    D 
Sbjct: 301 FQAGRPDAAQEIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNMLESLFE 494
               +V++   K+   E A DL+  +  +G +  D V +  M+S +  ++ ++  + L+ 
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKG-LKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 495 RLDSDS 500
           ++  D 
Sbjct: 417 KMQEDG 422



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 163/320 (50%), Gaps = 3/320 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE  + P V  YN ++    +      A  LFD M + G+  D  TY++L+      G +
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 166

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   ++ M    +  +++ ++ +I++  K   +S+A+ ++  +    + PD+  YN++
Sbjct: 167 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN         EA+ +++ M  +G  PD V+Y+TL+N + ++ +  E   +F EM +   
Sbjct: 227 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 286

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N +I  Y Q      A  +F    +M   P++ +Y+ LL          +A+ 
Sbjct: 287 VGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALV 343

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  MQ+ EIE ++ TYN +I    K    E A +L + +  +G++P+ ++Y+T+I+ + 
Sbjct: 344 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403

Query: 311 KAGKLDRAAMLFQKLRSSGV 330
           +  + D++ +L++K++  G+
Sbjct: 404 RKRQWDKSDLLYRKMQEDGL 423



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 32/173 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--- 73
           P V  YN ++    ++K+ +    LF EM QRG+  D  TY+T+I  + + G  D+A   
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312

Query: 74  ---------------------ISW--------LQQMEQDRVSGDLVLYSNLIELARKLSD 104
                                ++W         + M++  +  D+  Y+ +I    K+ +
Sbjct: 313 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              A  +F  L   G+ PD+V+Y TMI+ F + + + ++ LL  +M+E G+ P
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 211/484 (43%), Gaps = 74/484 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +   N +L+ +    Q  +A   FD M + G +P+  T+STLI  + KE   D A S 
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 77  LQQMEQDRVSGDLVLYSNLIE------------------LAR-----------------K 101
              M +  +  DLV+YS LI                   LAR                 +
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + D  KAI +++R+   GI P++V Y+ +IN   +     EA  +  ++ +QG++P  ++
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           YS+L++ + ++    +   ++  M       D+  C+++I+   +  M  +A R F+   
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 222 KMGID-----------------------------------PSVVSYNTLLRVYGEAELFG 246
           K G+                                    P VV+Y  L++   E     
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA+ LF  + +K    + + Y T+I  + K  +      + + MQ+ GI P+   Y+ +I
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----Q 362
            ++ + G ++    L +++   G+E D V Y TMI  Y  + + + A +L   L+    Q
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ 657

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN I     I    + GR+++A  +F    + G   +I  + C+I+ + + +   +  E+
Sbjct: 658 PNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFEL 717

Query: 423 FEKM 426
           +EKM
Sbjct: 718 YEKM 721



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 193/430 (44%), Gaps = 32/430 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  Y+ ++    +++      GL+  M ++G  PD    S LI    ++GM D A+ +
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q  +  ++ +  L++ LI+   +L      + ++  +    ++PD+V Y  ++    +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L  ++ ++G  PD + Y TL++ + +       L +F  M       D+  
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I+++ +    ++   L   + K G++P +V+YNT++  Y   ++F +AI LF +++
Sbjct: 593 YNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
               + N +T+  +I  Y K    + A  +   M  RG EPN +TYS +I  + K    +
Sbjct: 653 CGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L++K+                   +RV               PN +     I  L 
Sbjct: 713 SAFELYEKMLG-----------------DRV--------------SPNIVSYSILIDGLC 741

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA+  F+ A     + D+  +G +I  + +  + A  + +++ M   G  PD  
Sbjct: 742 KKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD- 800

Query: 437 IIALVLNSYG 446
           ++   L  YG
Sbjct: 801 LLQKALAEYG 810



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 4/431 (0%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A   F  +  SG  P+LV ++T+INV+ K     EA  L   M E+G+ PD V YS L+N
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
                 K  E  S+F+        +D+   + ++D Y ++     A  ++  M K GI P
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+Y+ L+          EA  +F  + ++ +E +V+TY+++I  + KS        L 
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M  +G  P+ +  S +I    + G +D A   F +    G+ ++  L+  +I    R+
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVF 403
                  ++   +     IP     T+L +     GR++EA  +F Q    G   D  ++
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+ F + +  A  +++F+ M+S G FPD  I  +++N + +    E   +L  E+ +
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 523
            G       +  M+  Y + K F+    LFE L             ++   Y +  R++D
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 524 ASRIMNRMNKR 534
           A  I + M +R
Sbjct: 679 AMLIFSSMLER 689



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 115/241 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP    Y  ++    + +       +F  M+  GI PD   Y+ LI  F +EG  ++ +
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+++ +  +  D+V Y+ +I     L  +SKAI +F  LK     P+ + +  +I+ +
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAY 670

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +A L+   M E+G +P+ ++YS L++ Y +      A  ++ +M       ++
Sbjct: 671 CKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNI 730

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + +I+ID   +  + ++A   F       + P V++Y  L+R Y +     EA+ L+  
Sbjct: 731 VSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDH 790

Query: 255 M 255
           M
Sbjct: 791 M 791



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 5/187 (2%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R  P+   + +++    +  + + A  +F  M +RG  P+  TYS LI  + K    +S
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A    ++M  DRVS ++V YS LI+   K     +A   F       ++PD++AY  +I 
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            + K     EA +L + M   G+ PD +    L     ++ +     +VF E      PL
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPE-----SPL 828

Query: 193 DLTTCNI 199
           +L  C +
Sbjct: 829 NLLVCPV 835


>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 569

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 201/445 (45%), Gaps = 41/445 (9%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I  WI   + +   V  +N+V+    R   +++A   + E+ +    P   TY+ L+  +
Sbjct: 134 ICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAY 193

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G+ +                                   KA +IF+ ++  G+ P  
Sbjct: 194 CTSGLLE-----------------------------------KAEAIFAEMRKYGLPPSA 218

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YN  I+   KA   + A  + + M+    +P T +Y+ L+NL+ +  +   AL +F E
Sbjct: 219 IVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNE 278

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M    C  ++ T   +++ + +  + + A+ +F  +++ G +P V +YN L+  Y  A  
Sbjct: 279 MRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGF 338

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              A  +F LMQ    E +  +YN M+  YG+   HE A  + +EM+  GI P   ++  
Sbjct: 339 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHML 398

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-P 363
           +++ + KAG + +   +  +L  SG+E D  +  +M+  Y R+G     + +L  +   P
Sbjct: 399 LLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGP 458

Query: 364 NTIPRET---AITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANV 419
                 T    I I  RAG  E+   +F Q+  A  +K D+  +   +  +SR K Y   
Sbjct: 459 YATDISTYNILINIYGRAGFFEKMEGLF-QSLAAKNLKPDVVTWTSRLGAYSRKKLYTKC 517

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNS 444
           +E+FE+M  AG  PD     ++L+S
Sbjct: 518 LEIFEEMIDAGCHPDGRTAKVLLSS 542



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 157/319 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   Y +++    +A Q  +A  LF+EMR +   P+  TY+ L+  F +EG+ + A   
Sbjct: 251 PSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEI 310

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +Q+++D    D+  Y+ L+E   +      A  IFS ++  G  PD  +YN M++ +G+
Sbjct: 311 FEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 370

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L ++A+ + EEM+  G+ P   S+  LL+ Y +     +   +  E++E     D   
Sbjct: 371 GGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFV 430

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M+++YG+L      + +  +M        + +YN L+ +YG A  F +   LF+ + 
Sbjct: 431 LNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLA 490

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K ++ +VVT+ + +  Y +   + K   + +EM + G  P+  T   +++      +++
Sbjct: 491 AKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIE 550

Query: 317 RAAMLFQKLRSSGVEIDPV 335
           +   + + +  +   + PV
Sbjct: 551 QVTTVIRTMHKNMETVLPV 569



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 33/383 (8%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           L  S    D++ +N +I+ +G+  L+K A     E+ E    P   +Y+ LL  Y  +  
Sbjct: 139 LYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGL 198

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +A ++FAEM +   P      N  ID   +    + A  +F  M++    PS  +Y  
Sbjct: 199 LEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTL 258

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+ ++G+A     A+ LF  M+ ++ + N+ TY  ++  + +    EKA  + +++Q  G
Sbjct: 259 LINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 318

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
            EP+   Y+ ++  + +AG    AA +F  ++  G E D   Y  M+ AY R GL   A+
Sbjct: 319 HEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQ 378

Query: 355 RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            +  E+++    P   +  +L  A         + +A D  + +DI              
Sbjct: 379 AVFEEMKRLGITPTMKSHMLLLSA---------YSKAGDVAKCEDI-------------- 415

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
                     ++  +G  PD+ ++  +LN YG+L +F   +++ + M E G   +D   +
Sbjct: 416 --------VNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAM-ESGPYATDISTY 466

Query: 475 QML-SLYGARKDFNMLESLFERL 496
            +L ++YG    F  +E LF+ L
Sbjct: 467 NILINIYGRAGFFEKMEGLFQSL 489



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/397 (21%), Positives = 174/397 (43%), Gaps = 35/397 (8%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMR----EQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           ++ +INV  + +L K+  L++   +        + D + ++ +++ Y     +  A + +
Sbjct: 112 WDDLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTY 171

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            E+ E  C     T  +++  Y    + + A+ +F  MRK G+ PS + YN  +    +A
Sbjct: 172 FELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKA 231

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
                A+ +F+ M+R   + +  TY  +I ++GK+ +   A  L  EM+++  +PN  TY
Sbjct: 232 GNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTY 291

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + ++  + + G  ++A  +F++L+  G E D   Y  ++ AY R G    A  +   ++ 
Sbjct: 292 TALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 351

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
               P                               D + +  M++ + R   + +   V
Sbjct: 352 MGCEP-------------------------------DRASYNIMVDAYGRGGLHEDAQAV 380

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           FE+M+  G  P      L+L++Y K  +    +D+ +E+ E G      V   ML+LYG 
Sbjct: 381 FEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGR 440

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
              F  +E +   ++S         ++++  IY RA 
Sbjct: 441 LGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAG 477



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 35/247 (14%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + P V+AYN ++    RA     A  +F  M+  G  PDR +Y+ ++  +G+ G+ 
Sbjct: 315 QEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLH 374

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------- 122
           + A +  ++M++  ++  +  +  L+    K  D +K   I + L  SG+ P        
Sbjct: 375 EDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSM 434

Query: 123 ---------------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                      D+  YN +IN++G+A  F++   L + +  + +
Sbjct: 435 LNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNL 494

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           KPD V++++ L  Y     + + L +F EM +  C  D  T  +++      D  +    
Sbjct: 495 KPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTT 554

Query: 216 LFWSMRK 222
           +  +M K
Sbjct: 555 VIRTMHK 561



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 150/366 (40%), Gaps = 39/366 (10%)

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF----WSMRKMGIDPS 228
            K V+  +V+A ++ +  P    T + +I+V  QL + K  D +     W + +      
Sbjct: 90  QKEVDPSTVWAALDTL--PATHETWDDLINVVVQLRLNKKWDLILLICQWILYRSSFQSD 147

Query: 229 VVSYNTLLRVYGEAELFGEA-IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           V+ +N ++  YG   L+  A    F L++ + I     TY  ++K Y  S   EKA  + 
Sbjct: 148 VMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTED-TYALLLKAYCTSGLLEKAEAIF 206

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM+  G+ P+AI Y+  I    KAG   RA  +FQ+++    +     Y  +I  + + 
Sbjct: 207 AEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKA 266

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
                A +L +E+R     P                               +I  +  ++
Sbjct: 267 SQSYMALKLFNEMRSQKCKP-------------------------------NICTYTALV 295

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             F+R        E+FE+++  G+ PD +    ++ +Y +      A +++S MQ  GC 
Sbjct: 296 NAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCE 355

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
                +  M+  YG        +++FE +         + H ++   Y +A  +     I
Sbjct: 356 PDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDI 415

Query: 528 MNRMNK 533
           +N +++
Sbjct: 416 VNELHE 421


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 221/493 (44%), Gaps = 39/493 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +  +L +++++K +     LF +M  RGI P+   ++ LI CF + G+   A S
Sbjct: 67  TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFS 126

Query: 76  WLQQM-----EQDRVSG------------------------------DLVLYSNLIELAR 100
            L ++     E D ++                               D V Y  LI    
Sbjct: 127 VLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 186

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K+ +   A+ +  R+    +  D+V Y+T+I+   K K   +A  L  EM  + +  + V
Sbjct: 187 KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS L++ +    K  +A+ +F +M   N   D+ T NI++D + +    K+A      M
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K GI P +V+YN+L+  Y        A  +   M  + +   V +YN +I  + K    
Sbjct: 307 MKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMV 366

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A  L +EM ++ I PN ITY+++I    K+G++  A  L   +   G + D + Y ++
Sbjct: 367 DQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           + A  +  LV  A  LL +L+    +PN       I  L + GR+E+A  +F      G 
Sbjct: 427 LDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              ++ +  MI+ F  +  +   + +  KM+     PD+    +++ S     E + A+ 
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546

Query: 457 LYSEMQEEGCVFS 469
           L  EM   G ++S
Sbjct: 547 LLREMITRGLLYS 559



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/469 (21%), Positives = 207/469 (44%), Gaps = 4/469 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  LF+ + ++   P    +  ++    K   + + +S  Q+ME   +  + V ++ LI 
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              +L     A S+ +++   G  PD +  NT I  F       +A    +++   G   
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D VSY TL+N   +  +   AL +   ++     LD+   + +ID   +     DA  L+
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M    I  ++V+Y+ L+  +       +AI LF  M  + I  +V T+N ++  + K 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++A N +  M  +GI+P+ +TY++++  +    +++ A  +   +   GV      Y
Sbjct: 294 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSY 353

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  + ++ +V  A +L  E+      PN I   + I  L ++GRI  A  +     D
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G+  DI  +  +++   +N      I +  K++  G  P+ +   ++++   K    E 
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           A +++ ++  +G   +   +  M+  + +   F+   SL  ++  +S I
Sbjct: 474 ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/441 (21%), Positives = 201/441 (45%), Gaps = 24/441 (5%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R S ++  Y+ ++       + + A GLF++M    I PD YT++ L+  F KEG    A
Sbjct: 240 RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA 299

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M +  +  D+V Y++L++    +++ + A SI + +   G+   + +YN +IN 
Sbjct: 300 KNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K K+  +A  L +EM  + + P+ ++Y++L++   ++ +   AL +   M++     D
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPD 419

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + ++D   +  +   A  L   ++  GI P++ +Y  L+    +     +A ++F 
Sbjct: 420 IITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFE 479

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K     V TY  MI+ +      ++A +L+ +M++    P+AITY  II       
Sbjct: 480 DLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKD 539

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET--- 370
           + D+A  L +++ + G     +LY  +      +  +A     L+      T  +E+   
Sbjct: 540 ENDKAEKLLREMITRG-----LLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNW 594

Query: 371 ---------AITILARAGR----IEEATWVFRQAFD---AGEVKDISVFGCMIELFSRNK 414
                       +L ++      +E  + +     D    G + D++ +  MI+ F  + 
Sbjct: 595 AKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHG 654

Query: 415 KYANVIEVFEKMRSAGYFPDS 435
            +   + +  KM   G  PD+
Sbjct: 655 LFDESLALLSKMEVNGCIPDA 675



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 12/371 (3%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           +D   A+S+F+ L      P  + +  ++    K+K +     L ++M  +G+KP+ V++
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKD-ADRLFW 218
           + L+N + +      A SV A++ ++    D  T N  I  +   GQ+  A +  D+L  
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV- 167

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
               +G     VSY TL+    +      A+ L R +  K ++ +VV Y+T+I    K  
Sbjct: 168 ---ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
               A +L  EM +R I  N +TYS +I+ +   GKL  A  LF K+ S  +  D   + 
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 339 TMIVAYERVGLVAHAKR----LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            ++ A+ + G V  AK     ++ +  +P+ +   + +        +  A  +       
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    +  +  +I  F + K     +++F++M     FP+      +++   K      A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 455 DDLYSEMQEEG 465
            +L   M + G
Sbjct: 405 LELIDLMHDRG 415


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 207/437 (47%), Gaps = 9/437 (2%)

Query: 47  QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS 106
           + G  P+  T STL+     EG    A+    +M +    GD++LY  LI   RK     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A+ +  R+ S     +   Y  +I+   K  L  +   +  EM   G+ P+ + YS+L+
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           N      K  EA+++F EM       ++ T N +I    +  + K+A R F  M   GI 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE--KAT 284
           P VV++ TL+    +     EA  +F LM ++    N+VTYN+++   G  L H+   A 
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN--GLCLHHQMDHAV 239

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L + M  RGI+ + I+Y+T+I  +  +GK + A  LF+K++   +      Y  ++ A 
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDI 400
            + G +  AK L + ++     P     T+    L + G IEEA  VFR          I
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            ++  +I    + +++ + +E+F+++ + G  P+     +++N   K  +   A+ L+ +
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 461 MQEEGCVFSDQVHFQML 477
           M+E GC   D++ F  +
Sbjct: 420 MEESGCE-QDEISFNFI 435



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 176/361 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+V  Y+ ++  + R  +   A  LFDEM  +GI  +  TY++LI    + G++  A  
Sbjct: 111 CPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATR 170

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              QM  + +  D+V ++ LI+   K     +A  IF  +   G  P++V YN+++N   
Sbjct: 171 TFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLC 230

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                  A  L E M E+G+K D +SY+TL+N Y  + K  EA+++F +M        +T
Sbjct: 231 LHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSIT 290

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  I++    Q    + A  LF +M+  G  PS+ +Y  LL    +     EAI +FR +
Sbjct: 291 TYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +  + + ++  Y+ +I    ++   E A  +  E+   G+ PN +TY+ +I    K GKL
Sbjct: 351 KSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKL 410

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  LF ++  SG E D + +  +I  + +   V  A   L  +R+ N  P ++   +L
Sbjct: 411 LEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLML 470

Query: 376 A 376
            
Sbjct: 471 V 471



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 217/475 (45%), Gaps = 4/475 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++ Y P++   + +++ +    +   A  LFD+M + G   D   Y  LI    K     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+   ++M  +  SG+   Y  +I+   K     K + +F  + + GI P+++ Y+++I
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   +    +EA  L +EM  QG+K + ++Y++L++       + EA   F++M      
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T   +ID   +    ++A ++F  M K G  P++V+YN+LL           A+ L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F +M  + I+ +V++YNT+I  Y  S + E+A  L ++MQ   + P+  TY+ ++    +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G++  A  LF  ++  G       Y  ++    + G +  A  +   L+     P    
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            +IL     +A R E A  +F +    G V +I  +  MI    +  K      +F +M 
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
            +G   D      ++  + +  + + A +    M+E+    +D V   +++LY A
Sbjct: 422 ESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAA 476


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 211/446 (47%), Gaps = 16/446 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +SP+   +  +++ +    +   A GL  +M + G  P+  TY TL+      G    A+
Sbjct: 158 HSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAV 217

Query: 75  SWLQQMEQDR------VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
              ++M          +  +LV Y  +I+   K     K   +F  +K  GI PD+VAY+
Sbjct: 218 KLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYS 277

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+       ++ A+ L  EM ++GV P+ V+++ L++   +  K  EA  +   M + 
Sbjct: 278 SIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337

Query: 189 NCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
               D  T N +ID +   G++D A+D   LF SM   GI+   VSYN L+  Y ++   
Sbjct: 338 GESPDTFTYNTLIDGFCLEGRIDDARD---LFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA  L+R M  KEI   V+TYNT++    +  +   A NL  EM+   + P + TY+ +
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK----RLLHELR 361
           +    K   L  A  LF  L +   +    ++  +I    +   +  A+    RL HE  
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +PN I     I  L ++G++E A  +F    + G   ++  F  ++  F +N +   V+E
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGK 447
           + ++M    + PD+  I++V++   K
Sbjct: 575 LLQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 213/461 (46%), Gaps = 10/461 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P + ++N +L  V + K++     L+  M   G+APD  T + LI C+      D  ++
Sbjct: 89  TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M +   S + V +++L++     S  S+A  +  ++   G  P++V Y T++N   
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 136 KAKLFKEARLLIEEMREQG------VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                  A  L EEM          +KP+ V Y T+++   ++    +   +F EM    
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   + +I         + A  LF  M   G+ P+VV++N L+    +A    EA 
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           HL +LM ++    +  TYNT+I  +      + A +L   M+++GIE +A++Y+ +I  +
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K+G++  A  L++++    +    + Y T++    R G V  A  L  E++  +  P  
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448

Query: 370 TAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               I    L +   + EA  +F    +      I +F C+I+   + +K     E+F +
Sbjct: 449 CTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR 508

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +   G  P+     ++++   K  + E A DL+  M+E+GC
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 153/313 (48%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  +NV++  + +A + E A+ L   M QRG +PD +TY+TLI  F  EG  D A   
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME   +  D V Y+ LI    K     +A  ++  +    I+P ++ YNT++    +
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  L  EM+   + P++ +Y+ LL+   +N+   EA+ +F  +   +    +  
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID   +    + A  LF  +   G++P+V++Y  ++    ++     A  LF  M+
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGME 545

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K    N+VT+NT+++ + ++ E +K   L+QEM  +   P+A T S ++ +  K  K  
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYR 605

Query: 317 RAAMLFQKLRSSG 329
               L     + G
Sbjct: 606 EYLHLLPTFPAQG 618



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 35/173 (20%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E   + PS+  +N ++  + +A++ E+A  LF+ +   G+ P+  TY+ +I    K G  
Sbjct: 475 ENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQL 534

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           ++A      ME+                                    G  P+LV +NT+
Sbjct: 535 ENAKDLFLGMEE-----------------------------------KGCAPNLVTFNTL 559

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  F +    ++   L++EM E+   PD  + S +++L  ++ K+ E L +  
Sbjct: 560 MRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLP 612


>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
 gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
          Length = 698

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 183/367 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++ AYN +L    R  Q +    +   +R  G++ ++ TY  LI  + + G+ D   + 
Sbjct: 315 PNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEAL 374

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M    +  +  +Y+ +I + R    + K + +   ++ +G+ PD   YN +IN FG+
Sbjct: 375 YQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGR 434

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +  ++AR+   +M++ G++PD VS+++L++   +  + +EA  ++ +M    C     T
Sbjct: 435 TRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQT 494

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I   G+     D + +   MR  G+ P+VV+Y TL+ VY +A LF +A+   + M+
Sbjct: 495 FNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMK 554

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +   Y+ +   Y +    E+  +++Q M+   IE N    + +I  +  AG+  
Sbjct: 555 EDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQ 614

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  +F+ ++ +G+  D + Y T++ A  R   +     +  E+ +    P   A  +L 
Sbjct: 615 EAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDMLR 674

Query: 377 RAGRIEE 383
            A R +E
Sbjct: 675 SAFRFKE 681



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 208/428 (48%), Gaps = 7/428 (1%)

Query: 40  GLF--DEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           G+F  ++++  G+  DR +Y +L+   GK G    A + L++M+   +  +L  Y+ L+ 
Sbjct: 266 GMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLG 325

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              +     +  ++ + L+ +G+  + + Y  +I+ + +A L      L +EMR+  ++P
Sbjct: 326 GYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRP 385

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +T  Y+ ++ +Y +  ++ + + +  EM +     D    N++I+ +G+    + A   F
Sbjct: 386 NTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAF 445

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
           + M+  GI+P VVS+N+L+    +A    EA  L+  M          T+N +I   G+ 
Sbjct: 446 FKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEH 505

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                   +++EM+++G+ PN +TY+T++ ++ +A     A    Q ++  G+   P  Y
Sbjct: 506 KRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAY 565

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFD 393
             +  AY ++G+      +L  + + N       + +L    + AGR +EA  VF    +
Sbjct: 566 SALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKE 625

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG-KLREFE 452
           AG   D   +  +++   R +K   V  VF++M  AG  PD     ++ +++  K RE  
Sbjct: 626 AGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDMLRSAFRFKERELS 685

Query: 453 TADDLYSE 460
             D  ++E
Sbjct: 686 PKDKSFAE 693



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 216/481 (44%), Gaps = 43/481 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRA----KQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +L+W+ E +         +VV+    R     K  E+A  L   +++RG       Y+ L
Sbjct: 130 LLEWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRG-------YNAL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK-LSDYSKAISIFSRLKSSG 119
           +  + +   +  A+  L +M+      D+V Y+++I+  R  + D      +F  +++ G
Sbjct: 183 VGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEG 242

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           +  D   YN +I   G+A    E    +E+++  G+  D  SY +L+    ++ +  EA 
Sbjct: 243 VQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAE 302

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           ++  EM       +L   N ++  Y +    +  D +   +R  G+  + ++Y  L+  Y
Sbjct: 303 ALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAY 362

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
             A L      L++ M+  +I  N   Y  MI IY  + + +K   L++EMQ  G+ P+A
Sbjct: 363 ARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDA 422

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
             Y+ II  +G+  +L++A + F K++  G+E D V + ++I A  + G    A++L ++
Sbjct: 423 HVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYK 482

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           +      P  TA T                             F  +I     +K++ +V
Sbjct: 483 MVNDGCAP--TAQT-----------------------------FNIVIHGLGEHKRWNDV 511

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E+ E+MRS G FP+      +++ Y + R F+ A +    M+E+G   S   +  + + 
Sbjct: 512 NEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANA 571

Query: 480 Y 480
           Y
Sbjct: 572 Y 572



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/487 (21%), Positives = 214/487 (43%), Gaps = 42/487 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD--SAISWLQ 78
            YN ++    + + +  A     +M+  G  PD  +Y+ +I    + G+ D  +     Q
Sbjct: 178 GYNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQAC-RHGVVDIYTGFRLFQ 236

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+ + V  D  +Y++LI    +    ++ +    +L++SG+V D  +Y +++   GK  
Sbjct: 237 EMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHG 296

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA  L+EEM+  G++P+  +Y+TLL  Y    +  +  +V   + +    ++  T  
Sbjct: 297 RTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYC 356

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++ID Y +  +    + L+  MR   I P+   Y  ++ +Y +   + + + L R MQ+ 
Sbjct: 357 LLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            +  +   YN +I  +G++ + E+A     +MQ+ GIEP+ ++++++I    KAG+   A
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476

Query: 319 AMLFQK-----------------------------------LRSSGVEIDPVLYQTMIVA 343
             L+ K                                   +RS G+  + V Y T++  
Sbjct: 477 RKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDV 536

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKD 399
           Y +  L   A   L  +++    P  TA + LA A    G  E+   V +         +
Sbjct: 537 YAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEIN 596

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +++   +I  FS   +      VFE ++ AG   D      ++ +  +  + +    ++ 
Sbjct: 597 LAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFD 656

Query: 460 EMQEEGC 466
           EM + GC
Sbjct: 657 EMIKAGC 663



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/448 (20%), Positives = 184/448 (41%), Gaps = 42/448 (9%)

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV--FGKAKLFKEARLLIEE 149
           Y+ L+    +  DY KA+   S++K+ G  PD+V+Y  +I     G   ++   RL  +E
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLF-QE 237

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M+ +GV+ D   Y+ L+    + HK  E +    ++       D  +   ++   G+   
Sbjct: 238 MQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGR 297

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             +A+ L   M+  G+ P++ +YNTLL  Y                 RK   Q + T  T
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGY----------------SRKGQLQQIDTVKT 341

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +++  G S+                   N ITY  +I  + +AG +DR   L+Q++R   
Sbjct: 342 LLRDTGMSI-------------------NKITYCLLIDAYARAGLMDRLEALYQEMRDCD 382

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEAT 385
           +  +  +Y  MI  Y   G      +LL E++Q    P        I    R  ++E+A 
Sbjct: 383 IRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQAR 442

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             F +  D G   D+  +  +I+   +  +     +++ KM + G  P +    +V++  
Sbjct: 443 IAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGL 502

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
           G+ + +   +++  EM+ +G   +   +  ++ +Y   + F       + +  D      
Sbjct: 503 GEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSP 562

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMNK 533
             +  +A  Y +         ++  M K
Sbjct: 563 TAYSALANAYAQLGMCEQTLHVLQTMEK 590



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 122/245 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A  +P    YNV++    R +Q E A   F +M+  GI PD  ++++LI    K G  
Sbjct: 414 QQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQP 473

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M  D  +     ++ +I    +   ++    +   ++S G+ P++V Y T+
Sbjct: 474 LEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTL 533

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++V+ +A+LF++A   ++ M+E G+ P   +YS L N Y +     + L V   M + N 
Sbjct: 534 VDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENI 593

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            ++L   N++I+ +     +++A  +F  +++ G+    ++Y TL++    AE   E   
Sbjct: 594 EINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSG 653

Query: 251 LFRLM 255
           +F  M
Sbjct: 654 VFDEM 658



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   +N+V+  +   K+W   + + +EMR +G+ P+  TY+TL+  + +  +F  A+ 
Sbjct: 489 APTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVE 548

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ M++D +      YS L     +L    + + +   ++   I  +L   N +IN F 
Sbjct: 549 CLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFS 608

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            A   +EA  + E ++E G+  D ++Y+TL+   +   K  E   VF EM +  C  D
Sbjct: 609 MAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPD 666


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 214/454 (47%), Gaps = 34/454 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ VL  + ++K ++L   LF  M   GI  D Y+Y+ +I C  +   F 
Sbjct: 62  QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S + +M +     D+V  S+LI    + +    AI + S+++  G  PD+V YNT+I
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K  L  +A  L + M   GV+ D V+Y++L+     + ++ +A  +  +M   +  
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T   +IDV+ +     +A +L+  M +  +DP V +YN+L+          EA  +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM  K    +VVTYNT+I  + KS   ++ T L +EM  RG+  + ITY+TII  + +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG+ D A  +F ++ S                                  +PN       
Sbjct: 362 AGRPDAAQEIFSRMDS----------------------------------RPNIRTYSIL 387

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +  L    R+E+A  +F     +    DI+ +  +I    +     +  ++F  +   G 
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            PD      +++ + + R+++ +D LY +MQE+G
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 209/432 (48%), Gaps = 9/432 (2%)

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I    +M Q R    +V +S ++    K  +Y   IS+F  ++  GI  DL +YN +IN 
Sbjct: 54  IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +   F  A  ++ +M + G +PD V+ S+L+N + + ++  +A+ + ++M E+    D
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N +ID   ++ +  DA  LF  M + G+    V+YN+L+     +  + +A  L R
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  ++I  NV+T+  +I ++ K  +  +A  L +EM  R ++P+  TY+++I      G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           ++D A  +   + + G   D V Y T+I  + +   V    +L  E+ Q     +TI   
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    +AGR + A  +F +      ++  S+   ++     N +    + +FE M+ +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKS 410

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNM 488
               D     +V++   K+   E A DL+  +  +G +  D V +  M+S +  ++ ++ 
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG-LKPDVVSYTTMISGFCRKRQWDK 469

Query: 489 LESLFERLDSDS 500
            + L+ ++  D 
Sbjct: 470 SDLLYRKMQEDG 481



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 163/320 (50%), Gaps = 3/320 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE  + P V  YN ++    +      A  LFD M + G+  D  TY++L+      G +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   ++ M    +  +++ ++ +I++  K   +S+A+ ++  +    + PD+  YN++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN         EA+ +++ M  +G  PD V+Y+TL+N + ++ +  E   +F EM +   
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N +I  Y Q      A  +F    +M   P++ +Y+ LL          +A+ 
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALV 402

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  MQ+ EIE ++ TYN +I    K    E A +L + +  +G++P+ ++Y+T+I+ + 
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462

Query: 311 KAGKLDRAAMLFQKLRSSGV 330
           +  + D++ +L++K++  G+
Sbjct: 463 RKRQWDKSDLLYRKMQEDGL 482



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 32/173 (18%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--- 73
           P V  YN ++    ++K+ +    LF EM QRG+  D  TY+T+I  + + G  D+A   
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371

Query: 74  ---------------------ISW--------LQQMEQDRVSGDLVLYSNLIELARKLSD 104
                                ++W         + M++  +  D+  Y+ +I    K+ +
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              A  +F  L   G+ PD+V+Y TMI+ F + + + ++ LL  +M+E G+ P
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 216/472 (45%), Gaps = 67/472 (14%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +  W  ++++++ + F  N +L   ++A++ E AH  F    +    PD  +Y+TL+  F
Sbjct: 88  VFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGF 147

Query: 65  GKEGMFDSAISWLQQMEQDRV---------------------------------SGDLVL 91
            K G    A++   +M+   +                                 S +L+ 
Sbjct: 148 FKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLIS 207

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y+ +I+   K     KAI++F ++    I PD+V Y  +I+  GK +  KEA  L EE R
Sbjct: 208 YTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR 267

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMA 210
            +G  P  V+Y+T+++   +  +   AL+++ +M  E +   D+ T + +I+     +  
Sbjct: 268 AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRG 327

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI-EQNVVTYNT 269
           + A  L+  M   G  P VV+YNTLL    ++    +A+ +FR M    + + NV+TY  
Sbjct: 328 EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  + K      A  L +EM+ R + P+A+T++T+I    K  ++D A  LF+ +  + 
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT- 446

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
            + D VL+ TM+  Y ++                                RI++A  +  
Sbjct: 447 CKPDSVLFNTMLAGYCKI-------------------------------TRIDDAKKLHD 475

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           +  D+G    ++ +  ++  F R  +Y++ + ++ +M   G+ P+ H+  LV
Sbjct: 476 RMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELV 527



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 9/351 (2%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD V+YNT++N F KA   K+A  L  EM++ G+     S++ +L       K   A  V
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEV 193

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M+ +  P +L +  IMID   +      A  LF  M    I P VV+Y  L+   G+
Sbjct: 194 FKDMSGIFSP-NLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAI 300
                EA  LF   + K     VVTYNTMI    K    E A  L  +M +   ++P+  
Sbjct: 253 QRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF 312

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYS +I     + + ++A  L++++  +G   D V Y T++    + G    A  +  ++
Sbjct: 313 TYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372

Query: 361 R-----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
                  PN I     I    +  R+ +A  + ++      + D   F  +I+   +  +
Sbjct: 373 GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR 432

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
                E+FE +      PDS +   +L  Y K+   + A  L+  M + GC
Sbjct: 433 IDEAHELFESIGKTCK-PDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 209/455 (45%), Gaps = 30/455 (6%)

Query: 87  GDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           GD+++   + ++  ++ D + A  +F    K S    +    N +++V+ KA+  ++A L
Sbjct: 64  GDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHL 123

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY- 204
             +   +   +PD VSY+TL+N + +     +AL++F EM +    + L + NI++    
Sbjct: 124 FFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLC 182

Query: 205 --GQLDMA----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             G++ MA    KD   +F         P+++SY  ++    ++    +AI LF+ M  K
Sbjct: 183 SGGKISMAWEVFKDMSGIF--------SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDK 234

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  +VVTY  +I   GK    ++A +L +E + +G  P  +TY+T+I    K G+++ A
Sbjct: 235 AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENA 294

Query: 319 AMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
             L+  + R   ++ D   Y  +I           A  L  E+      P+ +   T + 
Sbjct: 295 LTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLD 354

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            L ++G  ++A  +FR+    G V D +V  +  +I+ F +  +  + +++ ++M     
Sbjct: 355 GLCKSGCEDKAMEIFRK-MGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLE 490
            PD+     V+    K    + A +L+  + +      D V F  ML+ Y      +  +
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGKT--CKPDSVLFNTMLAGYCKITRIDDAK 471

Query: 491 SLFER-LDSDSNINKKELHHVVAGIYERANRLNDA 524
            L +R LDS           +V G + R  R +DA
Sbjct: 472 KLHDRMLDSGCAPTLATYTALVTG-FCRTGRYSDA 505



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 2/227 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D +  E    P +F Y+ ++  +  + + E A+ L++EM   G +PD  TY+TL+
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
               K G  D A+   ++M    V   +++ Y+ LI+   K+     A+ +   ++   +
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +PD V + T+I    K     EA  L E + +   KPD+V ++T+L  Y +  +  +A  
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKK 472

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           +   M +  C   L T   ++  + +     DA  ++  M +MG  P
Sbjct: 473 LHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 22/261 (8%)

Query: 236 LRVYGE---AELFGEAIH----------LFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHE 281
           L +YG+    +L G+ IH          +F+   ++ +   N  T N ++ +Y K+   E
Sbjct: 60  LGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVE 119

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A    Q       EP+ ++Y+T++  + KAG + +A  LF +++ SG+    VL    I
Sbjct: 120 DAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA---VLRSHNI 176

Query: 342 V-----AYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           V     +  ++ +     + +  +  PN I     I  L ++ ++++A  +F+Q  D   
Sbjct: 177 VLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAI 236

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D+  +G +I+   + ++     ++FE+ R+ G  P       +++   K    E A  
Sbjct: 237 YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALT 296

Query: 457 LYSEMQEEGCVFSDQVHFQML 477
           LY +M  E  +  D   +  L
Sbjct: 297 LYDDMVREPHLKPDMFTYSAL 317


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 210/457 (45%), Gaps = 8/457 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A  +P V  YN ++R + +  + + A      M  +G  PD +TY+T+I  + K GM   
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   L+         D V Y +LI       D  +A+ +F+  ++  + PDLV YN+++ 
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +  L   A  ++ EM E+G  PD  +Y+ ++N   +     +A  V  +        
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D+ T N +ID Y +      A +L   M   GI P V++YN++L    +A    E    F
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K    N +TYN +I+ + K  + E+A+ ++  M   G+ P+A++++T+I  + + 
Sbjct: 514 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
           G LD A +LFQKL   G       +  +I AY     +  A+++  E+     +P+    
Sbjct: 574 GDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTY 633

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              +  L +A  ++ A     +    G V  ++ FG M+ L + N + +  + +   M  
Sbjct: 634 RILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVR 693

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  P+  ++  +L++  K  E      L  E+ ++G
Sbjct: 694 MGVVPE--VVDTILSTDKK--EIAAPKILVEELMKKG 726



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 216/467 (46%), Gaps = 5/467 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N VL  + +      +  L  ++ +RG++ +++T +  I    ++G  + A++ 
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M    V+ D+V Y+ L+    K S   +A     R+ + G +PD   YNT+I+ + K
Sbjct: 269 VERMGA-YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           + + +EA  L+++   +G  PD V+Y +L+N          AL +F E    +   DL  
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVV 387

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +  +   A ++   M + G  P + +YN ++    +     +A  +     
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K    +V T+NT+I  Y K L+ + A  L++ M   GI P+ ITY++++    KAGK  
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAK 507

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
                F+++   G   + + Y  +I  + ++  +  A  ++  + Q    P+ +   T I
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               R G ++ A  +F++  + G       F  +I  +S         ++F +M S GY 
Sbjct: 568 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 627

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           PD +   ++++   K    + A    +EM  +G V S     +ML+L
Sbjct: 628 PDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNL 674



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 212/458 (46%), Gaps = 46/458 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+  AYN ++  ++ A   + AH ++  M   G+APD  T++  +  F   G    A+ 
Sbjct: 103 PPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALR 162

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ + +         Y  ++                      G+      YN       
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVR---------------------GLYAHGHGYN------- 194

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                  AR L +EM  + V PD  +++ +L+   +    +E+ ++ A++ +     +  
Sbjct: 195 -------ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF 247

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMG--IDPSVVSYNTLLR-VYGEAELFGEAIHLF 252
           TCNI I    +    ++A  L   + +MG  + P VV+YNTL+R +  ++++   A +L 
Sbjct: 248 TCNIWIRGLCEDGRLEEAVAL---VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R+M +  I  +  TYNT+I  Y KS   ++AT L+++   +G  P+ +TY ++I      
Sbjct: 305 RMMNQGCIPDDF-TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAE 363

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           G ++RA  LF + ++  ++ D V+Y +++    R GL+ HA ++++E+ +    P+    
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I  L + G I +A  V   A   G + D+  F  +I+ + +  K  + +++ E+M +
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            G  PD      VLN   K  + +  ++ + EM  +GC
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  YS +   +N+++         ++A  +F EM  +G  PD YTY  L+    K    
Sbjct: 587 DEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANV 646

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A + L +M        +  +  ++ L       S+A++I   +   G+VP++V  +T+
Sbjct: 647 DRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTI 704

Query: 131 INVFGKAKLFKEARLLIEEMREQG 154
           ++     K     ++L+EE+ ++G
Sbjct: 705 LST--DKKEIAAPKILVEELMKKG 726



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/293 (19%), Positives = 110/293 (37%), Gaps = 8/293 (2%)

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           G+L  A DA   F  M      P+  +YN ++     A    +A  ++  M    +  + 
Sbjct: 85  GRLRAAVDA---FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            T+   +K +  +     A  L++ +  RG +     Y T++      G    A  LF +
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR 380
           +    V  D   +  ++ A  + G V  +  LL ++ +     N       I  L   GR
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           +EEA  +  +   A    D+  +  ++    ++ K     +   +M + G  PD      
Sbjct: 262 LEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           +++ Y K    + A +L  +   +G V     +  +++   A  D      LF
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 9/281 (3%)

Query: 205 GQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           G+LD   D D    S R  +  D     Y   ++ Y  A     A+  F  M        
Sbjct: 49  GRLD---DVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPA 105

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
              YN ++     +  H++A  +   M   G+ P+A T++  +  +   G+   A  L +
Sbjct: 106 APAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLR 165

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAG 379
            L   G +  P  Y T++      G   +A+ L  E+   +  P        +  L + G
Sbjct: 166 SLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKG 225

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
            + E+  +  +    G   +       I     + +    + + E+M  A   PD     
Sbjct: 226 DVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYN 284

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            ++    K  + + A      M  +GC+  D  +  ++  Y
Sbjct: 285 TLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 173/334 (51%), Gaps = 7/334 (2%)

Query: 11  EEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           +E R S  P+V  +N ++  + RA+  +   GL+ EM   G+ PD YTY  LI  F + G
Sbjct: 210 DEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTG 269

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             ++A+    +M    V+ + V+++ LI+   K  + +  + ++  ++  G++PDLVAYN
Sbjct: 270 RMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYN 329

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++N   +A+  K A  ++EEM+  G+KPD V+Y+TL++   ++ K   A+ +  +M E 
Sbjct: 330 ALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEK 389

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              LD  T   +I    +     DA+R+   M +  ++P   +Y  ++  +         
Sbjct: 390 EVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTG 449

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L + MQ K  +  VVTYN ++    K  + + A  L+  M N G+ P+ ITY+ ++  
Sbjct: 450 FKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDG 509

Query: 309 WGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMI 341
             K GK+  +    ++L SS G+  D  +Y ++I
Sbjct: 510 QCKHGKVANS----EELESSKGMVPDFAVYTSLI 539



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 7/348 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  +P    +NV++R+ +R  +   A  +FDEMR R + P   T++TLI+   +    D
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLD 237

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +     ++M    V  D+  Y  LI+   +      A+ +F+ ++ +G+ P+ V + T+I
Sbjct: 238 AVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLI 297

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K         L ++MR +GV PD V+Y+ L+N          A S+  EM      
Sbjct: 298 DAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLK 357

Query: 192 LDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            D  T   +ID     G+LDMA D   +   M +  +    V+Y  L+    +A    +A
Sbjct: 358 PDKVTYTTLIDGCCKDGKLDMAMD---IKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + R M    +E +  TY  +I  + +  + +    L++EMQN+G +P  +TY+ I+  
Sbjct: 415 ERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNG 474

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
             K G++  A ML   + + GV  D + Y  ++    + G VA+++ L
Sbjct: 475 LCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL 522



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 172/388 (44%), Gaps = 43/388 (11%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +L +   A  +F  ++ S + P +V +NT+I+   +A+       L +EM + GVKPD  
Sbjct: 198 RLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVY 256

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y  L+  +    +   A+ +F E                                   M
Sbjct: 257 TYGALIKGFCRTGRMENAVKMFNE-----------------------------------M 281

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G++P+ V + TL+  + +       + L++ M+ + +  ++V YN ++    ++   
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A ++++EM+N G++P+ +TY+T+I    K GKLD A  + QK+    V +D V Y  +
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           I    + G    A+R+L E+ +    P  T  T++     R G ++    + ++  + G+
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              +  +  ++    +  +  N   +   M + G  PD     ++L+   K  +   +++
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARK 484
           L S    +G V    V+  ++S    +K
Sbjct: 522 LES---SKGMVPDFAVYTSLISELAKKK 546



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 143/300 (47%), Gaps = 10/300 (3%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+++  + +L     A ++F  MR+  + P+VV++NTL+     A        L++ M  
Sbjct: 190 NVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++ +V TY  +IK + ++   E A  +  EM++ G+ PNA+ ++T+I    K G ++ 
Sbjct: 249 VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNA 308

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
              L+Q +R  GV  D V Y  ++    R   +  A+ ++ E++    +P+ +   T I 
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLID 368

Query: 374 ILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              + G+++ A  + +Q     EV  D   +  +I   S+  +  +   V  +M  A   
Sbjct: 369 GCCKDGKLDMAMDI-KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALE 427

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNML 489
           PD+    +V++++ +  + +T   L  EMQ +G    V +  V    L   G  K+ +ML
Sbjct: 428 PDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADML 487



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 136/305 (44%), Gaps = 8/305 (2%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +L    +A   +  +   G+ P    +N L+R +        A  +F  M R+ ++  VV
Sbjct: 163 RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVV 221

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T+NT+I    ++ + +    L +EM + G++P+  TY  +I  + + G+++ A  +F ++
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R +GV  + V++ T+I A+ + G V     L  ++R     P+ +     +  L RA  +
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           + A  +  +  +AG   D   +  +I+   ++ K    +++ +KM       D      +
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           ++   K      A+ +  EM E      +  +  ++  +  + D   +++ F+ L    N
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD---VKTGFKLLKEMQN 458

Query: 502 INKKE 506
             KK 
Sbjct: 459 KGKKP 463



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/332 (20%), Positives = 138/332 (41%), Gaps = 43/332 (12%)

Query: 204 YGQLDMAKDADRLFWSMRKMGID-PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
           Y    +  DA  L     + GI  P+ V    + R+    E +   + L       E   
Sbjct: 129 YADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETR- 187

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
               +N +++ + +  E   A  +  EM+ R ++P  +T++T+I+   +A  LD    L+
Sbjct: 188 ---LFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLY 243

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
           +++   GV+ D   Y  +I  +                                R GR+E
Sbjct: 244 KEMSDVGVKPDVYTYGALIKGF-------------------------------CRTGRME 272

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  +F +  D G   +  VF  +I+   +       +++++ MR  G  PD      ++
Sbjct: 273 NAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERL-DSD 499
           N   + R  + A+ +  EM+  G +  D+V +  L + G  KD   +M   + +++ + +
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAG-LKPDKVTYTTL-IDGCCKDGKLDMAMDIKQKMAEKE 390

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            ++++     +++G+  +A R  DA R++  M
Sbjct: 391 VSLDEVTYTALISGL-SKAGRPVDAERVLREM 421


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 214/469 (45%), Gaps = 14/469 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF Y  ++    R +  +LA G+FD M + G  P+  TYSTLI     EG  D A+ 
Sbjct: 230 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M +  +   +  Y+  I     +    +AI + +R+K  G  P++  Y  +I+   
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +    + A  L  +M ++G+ P+TV+Y+ L+N      +F  AL +F  M       +  
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 196 TCNIMIDVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T N   ++   L +  D ++   LF  M KMG  P+VV+YNTL+  Y        A  L 
Sbjct: 410 TYN---EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM+    E +  TYN ++  + K  + E A+   QEM   G+ PN ++Y+ +I    K 
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           GK+D A  L +++   G   +   Y  +I    +    + A+++  ++ +    PN I  
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I  L R GR + A  +F        + ++  +  +I    +  K        E+M  
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSE 642

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            G  P     + +++   +   F  A+ L  +M+E G     ++++ +L
Sbjct: 643 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 222/503 (44%), Gaps = 45/503 (8%)

Query: 5   ILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + D++NE +   +  S+++ N +L  + + +  E A  L+ +M   GI P   T++TLI 
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K+G    A   L Q+ Q  +S D+  Y++LI    +  +   A  +F R+   G  P
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + V Y+T+IN         EA  ++EEM E+G++P   +Y+  +          EA+ + 
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           A M +  C  ++ T   +I    +L   + A  L+  M K G+ P+ V+YN L+      
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 243 ELFGEAIHLFRLMQRK--------------------EIEQ---------------NVVTY 267
             F  A+ +F  M+                      +IE+                VVTY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT+I  Y        A  L+  M+  G EP+  TY+ +++ + K GKL+ A+  FQ++  
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+  +PV Y  +I  + + G V  A  LL  + +    PN       I  L++  R  E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +  +  + G + ++  +  +I+   RN +     ++F  M      P+ +  + ++ 
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI- 625

Query: 444 SYGKLREFETADDLYSEMQEEGC 466
            YG  +E +   D    M E GC
Sbjct: 626 -YGLCQEGKA--DEAERMSEIGC 645



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 219/482 (45%), Gaps = 46/482 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  ++  + R  + E+A GL+ +M + G+ P+  TY+ LI      G F +A+  
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF-G 135
              ME      +   Y+ +I+      D  KA+ +F ++   G +P +V YNT+IN +  
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 136 KAKLFKEARLL----------------------------------IEEMREQGVKPDTVS 161
           K  +   ARLL                                   +EM E G+ P+ VS
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+ L++ + ++ K   ALS+   M E+ C  ++ + N +I+   + +   +A+++   M 
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G+ P+V++Y TL+           A  +F  M++++   N+ TY+++I  YG  L  E
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI--YG--LCQE 631

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
              +  + M   G EP   TYST+++   + G+   A  L + ++  G   D  +Y +++
Sbjct: 632 GKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
           +A+ +   V HA ++ H +     Q +       I  L +AG++EEA  +F    +    
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH---IIALVLNSYGKLREFETA 454
            D  V+  +++   +  +    +++   M S  + P+     I+   L+  GK  E E  
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811

Query: 455 DD 456
            D
Sbjct: 812 AD 813



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 215/470 (45%), Gaps = 19/470 (4%)

Query: 74  ISWLQQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           IS L ++ +DRV    D +    +I+  R   +  +     + +   G    L + NT++
Sbjct: 112 ISMLNRLVRDRVFAPADHIRIL-MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 170

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K ++ + AR L ++M   G++P  ++++TL+N+  +  K  EA  + +++ + +  
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 230

Query: 192 LDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            D+ T   +I  + +   LD+A     +F  M K G DP+ V+Y+TL+          EA
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFG---VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + +   M  K IE  V TY   I         E+A  L+  M+ RG  PN  TY+ +I+ 
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
             + GKL+ A  L+ K+   G+  + V Y  +I      G  + A ++ H +       N
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T      I  L   G IE+A  +F +    G +  +  +  +I  +       N   + +
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M+  G  PD      +++ + K  + E+A   + EM E G +  + V +  L + G  K
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG-LNPNPVSYTAL-IDGHSK 525

Query: 485 D--FNMLESLFERLDS-DSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           D   ++  SL +R++    N N +  + V+ G+  + NR ++A +I ++M
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGL-SKENRFSEAEKICDKM 574



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 4/157 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ +  P+++ Y+ ++  + +  + + A    + M + G  P   TYSTL++   ++G F
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRF 665

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   ++ M++     D  +Y +L+    K  +   A+ IF  +++ G    L  Y  +
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 725

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           I    KA   +EA+ L + M E+    D + ++ L++
Sbjct: 726 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 16/186 (8%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++  Y+ ++  + R  ++  A  L  +M++RG  PDR  Y +L+    K    D
Sbjct: 642 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 701

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     +E       L +Y  LI    K     +A ++F  +       D + +  ++
Sbjct: 702 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 761

Query: 132 NVFGKAKLFKEARL-----LIEEMREQGVKPDTVSYSTL------LNLYVENHKFVEALS 180
           +      L KE  L     L+  M  +   P+  +Y  L      +   +E+    + L 
Sbjct: 762 D-----GLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816

Query: 181 VFAEMN 186
           V  + N
Sbjct: 817 VLKDSN 822


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 231/502 (46%), Gaps = 40/502 (7%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N+VL  + +  +   AH L  +M  RG  PD  +Y  +++ + + G  D  +  + +++ 
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D  +Y+N+I L  K  +  +A  +   ++  G+ PD V Y T+I+ F K      
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L +EMR + + PD V+Y+++++   ++ K VEA  +F EM                 
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM----------------- 408

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
                 + K            G++P  V+Y  L+  Y +A    EA  +   M +K +  
Sbjct: 409 ------LVK------------GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NVVTY  +     K+ E + A  L+ EM  +G++PN  TY+TI+    K G +++   L 
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLM 510

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARA 378
           +++  +G   D + Y T++ AY ++G +A A  L    L++  QP  +     +     +
Sbjct: 511 EEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMS 570

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +E+   +     + G + + + F  +++ +          E+++ M   G  PDS+  
Sbjct: 571 GMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTY 630

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            +++  + K R  + A  L+ EM E+G   +   +  ++  +  RK F     LFE +  
Sbjct: 631 NILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRK 690

Query: 499 DSNINKKELHHVVAGI-YERAN 519
              + +K+++ +   + YE  N
Sbjct: 691 HGLVAEKDIYDIFVDVNYEEGN 712



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 208/443 (46%), Gaps = 12/443 (2%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L DE++ +G+ PD Y Y+ +I    K G    A   L+ M +  V  D V+Y+ +I    
Sbjct: 299 LVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFC 358

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL + S A  +F  ++   IVPD+V Y ++I+   K+    EAR +  EM  +G++PD V
Sbjct: 359 KLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEV 418

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLF 217
           +Y+ L++ Y +  +  EA SV  +M +     ++ T   + D     G++D+   A+ L 
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV---ANELL 475

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M + G+ P+V +YNT++    +     + + L   M       + +TY T++  Y K 
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKM 535

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            E  KA  L++ M N+ ++P  +T++ ++  +  +G L+    L + +   G+  +   +
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF 595

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFD 393
            +++  Y     +     +   +     +P      IL     +A  ++EA ++ ++  +
Sbjct: 596 NSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 655

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G     + +  +I  F + KK+    ++FE+MR  G   +  I  + ++   +   +E 
Sbjct: 656 KGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEI 715

Query: 454 ADDLYSEMQEE--GCVFSDQVHF 474
             +L  E   E  G +F   + F
Sbjct: 716 TLELCDEFMTELSGTIFVVYICF 738



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 162/330 (49%), Gaps = 1/330 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y  V+  + ++ +   A  +F+EM  +G+ PD  TY+ LI  + K G    A S 
Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             QM Q  ++ ++V Y+ L +   K  +   A  +   +   G+ P++  YNT++N   K
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++   L+EEM   G  PDT++Y+TL++ Y +  +  +A  +   M        L T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++++ +    M +D +RL   M + GI P+  ++N+L++ Y           +++ M 
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  +  TYN +IK + K+   ++A  L +EM  +G    A TY  +I  + K  K  
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMI-VAYE 345
            A  LF+++R  G+  +  +Y   + V YE
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDVNYE 709



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 163/370 (44%), Gaps = 1/370 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y  V+    +      A  LFDEMR++ I PD  TY+++I    K G    A   
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    +  D V Y+ LI+   K  +  +A S+ +++   G+ P++V Y  + +   K
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+ EM  +G++P+  +Y+T++N   +     + + +  EM+      D  T
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++D Y ++     A  L   M    + P++V++N L+  +  + +  +   L   M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  N  T+N+++K Y         T + + M +RG+ P++ TY+ +I    KA  + 
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L +++   G  +    Y  +I  + +      A++L  E+R+   +  +    I  
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 377 RAGRIEEATW 386
                EE  W
Sbjct: 705 DVNY-EEGNW 713



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 4/362 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ +F      G+  + V+ N +++   +    +EA  L+ +M ++G  PD VSY  +++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            Y    +  + L +  E+       D    N +I +  +     +A++L   MRK G+ P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             V Y T++  + +      A  LF  M+RK+I  ++VTY ++I    KS +  +A  + 
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM  +G+EP+ +TY+ +I  + KAG++  A  +  ++   G+  + V Y  +     + 
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G +  A  LLHE+     QPN     T +  L + G IE+   +  +   AG   D   +
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ + +  + A   E+   M +    P      +++N +      E  + L   M E
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 464 EG 465
           +G
Sbjct: 586 KG 587



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 124/242 (51%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y  +   + +  + ++A+ L  EM ++G+ P+ YTY+T++    K G  +  + 
Sbjct: 449 TPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVK 508

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M+      D + Y+ L++   K+ + +KA  +   + +  + P LV +N ++N F 
Sbjct: 509 LMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFC 568

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            + + ++   LIE M E+G+ P+  ++++L+  Y   +       ++  M++     D  
Sbjct: 569 MSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSN 628

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI+I  + +    K+A  L   M + G   +  +Y+ L+R + + + F EA  LF  M
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688

Query: 256 QR 257
           ++
Sbjct: 689 RK 690



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P++  +NV++     +   E    L + M ++GI P+  T+++L+  +  +    + 
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               + M    V  D   Y+ LI+   K  +  +A  +   +   G       Y+ +I  
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671

Query: 134 FGKAKLFKEARLLIEEMREQGV 155
           F K K F EAR L EEMR+ G+
Sbjct: 672 FYKRKKFVEARKLFEEMRKHGL 693


>gi|297791025|ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309232|gb|EFH39656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 207/438 (47%), Gaps = 2/438 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++    +W+  +  +      YNV ++++   +Q+ L   +  EM + G+  D  TYST+
Sbjct: 168 KTHTFFNWVKSKNLFPMETIFYNVTMKSLRFGRQFYLIEEMALEMVKDGVELDNITYSTI 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ITC  +   +D AI W ++M +  +  D V YS ++++  KL    + +S++ R  ++G 
Sbjct: 228 ITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRKVEEVLSLYERAVATGW 287

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD +A++ +  +FG+A  +   R +++EM+   VKP+ V Y+TLL       K   A S
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM E     +  T   ++ +YG+   AKDA +L+  M+        + YNTLL +  
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCA 407

Query: 241 EAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           +  L  EA  LF  M+   + + +  +Y  M+ IYG   + EKA  L +EM   G++ N 
Sbjct: 408 DIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNV 467

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +  + ++   GKA ++D    +F      GV+ D  L   ++           A++++  
Sbjct: 468 MGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 527

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF-GCMIELFSRNKKYAN 418
           L + N         I+      E     F+   +A +V+    F  C+I++    K++  
Sbjct: 528 LERANRKLVTFVNLIVDEKTEFETVKEEFKLVINATQVEARRPFCNCLIDICRGKKRHER 587

Query: 419 VIEVFEKMRSAGYFPDSH 436
             E+       G +P  H
Sbjct: 588 AHELLYLGTLFGLYPGLH 605



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 188/386 (48%), Gaps = 14/386 (3%)

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFK 141
           DR +  LVL S        L ++ K  + F+ +KS  + P + + YN  +      + F 
Sbjct: 152 DRDNALLVLNS--------LREWQKTHTFFNWVKSKNLFPMETIFYNVTMKSLRFGRQFY 203

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
               +  EM + GV+ D ++YST++      + + +A+  F  M +     D  T + ++
Sbjct: 204 LIEEMALEMVKDGVELDNITYSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAIL 263

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           DVY +L   ++   L+      G  P  ++++ L +++GEA  +    ++ + M+  +++
Sbjct: 264 DVYSKLRKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK 323

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            NVV YNT+++  G++ +   A +L  EM   G+ PN  T + ++ I+GKA     A  L
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQL 383

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILA 376
           ++++++    +D +LY T++     +GL   A+RL +++++     P+       + I  
Sbjct: 384 WEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYG 443

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             G+ E+A  +F +  +AG   ++    C+++   + K+  +++ VF+     G  PD  
Sbjct: 444 SGGKAEKAMKLFEEMLEAGVQVNVMGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDR 503

Query: 437 IIALVLNSYGKLREFETADDLYSEMQ 462
           +   +L+        E A+ + + ++
Sbjct: 504 LCGCLLSVMALCESSEDAEKVMACLE 529



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M K G++   ++Y+T++        + +AI  F  M +  +  + VTY+ ++ +Y K  +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRK 271

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            E+  +L +     G +P+AI +S +  ++G+AG  D    + Q+++S  V+ + V+Y T
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           ++ A  R G    A+ L +E+ +    P E  +T L     +A   ++A  ++ +     
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKK 391

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMR-SAGYFPDSHIIALVLNSYGKLREFETA 454
              D  ++  ++ + +          +F  M+ S    PD+     +LN YG   + E A
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKA 451

Query: 455 DDLYSEMQEEG 465
             L+ EM E G
Sbjct: 452 MKLFEEMLEAG 462



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 31/193 (16%)

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM   G+E + ITYSTII    +    D+A   F+++  +G+  D V Y  ++  Y ++ 
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLR 270

Query: 349 LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
                                          ++EE   ++ +A   G   D   F  + +
Sbjct: 271 -------------------------------KVEEVLSLYERAVATGWKPDAIAFSVLGK 299

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
           +F     Y  +  V ++M+S    P+  +   +L + G+  +   A  L++EM E G   
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359

Query: 469 SDQVHFQMLSLYG 481
           +++    ++ +YG
Sbjct: 360 NEKTLTALVKIYG 372


>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
 gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
          Length = 431

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 182/365 (49%), Gaps = 1/365 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V   N V+    R+ +       F E+ + G  P+ YTY  +I    K G    A+ +L 
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +  +  D +LY+ +++   K +   +A  +F+ +KS G   D   Y  +I   G+ K
Sbjct: 74  KMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             +EA LL +EM E+G  P   +Y+ ++++Y +  +   A+ V  +M + N   D  T N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I    +    + A  +F  M+K G+  + VS+N +L   G+A   G A      M+ +
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I+ N +T+NT+I   G++    +A  ++QEM++ G+ P+  TY+ +I  + KAG + +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR- 377
             +F  +  +G   + V Y  +I A  + G    A+ +  ++++   +P     T+L + 
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQL 373

Query: 378 AGRIE 382
           AG+ +
Sbjct: 374 AGKCK 378



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 172/354 (48%), Gaps = 5/354 (1%)

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I  +G++    +     +E+ + G KP+  +Y  ++   V+    V A+    +M +
Sbjct: 18  NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIK 77

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D    N+++D  G+ +M  +A +LF SM+ MG      +Y  L+R  G  +   E
Sbjct: 78  TGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEE 137

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF  M+ +    +   Y  +I IY K+   E A  ++++M ++ + P+  T +++I 
Sbjct: 138 ATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLIT 197

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              + G+ + A  +F++++ SGV ++ V +  M+    + G V  A + + E+     +P
Sbjct: 198 AVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKP 257

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N+I   T I  L RA    EA  V ++   AG   D+  + CMIE F++        E+F
Sbjct: 258 NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMF 317

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             M  AG   +     L++++  K   ++ A D+Y +M+++G +  D +   +L
Sbjct: 318 GDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKG-ILPDAITATVL 370



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 150/319 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y  V++++++A    LA    D+M + G+ PD   Y+ ++   GK  M D A   
Sbjct: 47  PNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKL 106

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+      D   Y+ LI    +     +A  +F  ++  G  P   AY  +I+++ K
Sbjct: 107 FASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCK 166

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   + A +++++M ++ + PD  + ++L+       +   A  +F  M +    ++  +
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M+D  G+      A +    M   GI P+ +++NTL+   G A+   EA  + + M+
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMR 286

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +V TY  MI+ + K+    KA  +  +M+  G   N +TY+ +I    KAG+  
Sbjct: 287 SAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346

Query: 317 RAAMLFQKLRSSGVEIDPV 335
            A  ++  ++  G+  D +
Sbjct: 347 DARDIYFDMKKKGILPDAI 365



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 6/358 (1%)

Query: 90  VLYSNLIELA-RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           VL SN +  A  + S   K +  F  L   G  P+   Y  +I    KA     A   ++
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +M + G++PDT+ Y+ +L+   + +   EA  +FA M  + CP D  T  I+I   G+  
Sbjct: 74  KMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             ++A  LF  M + G  PS  +Y  ++ +Y +A     A+ + + M  K +  +  T N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           ++I    ++   E A  + + M+  G+  N ++++ ++   GKAGK+  A     ++ + 
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
           G++ + + + T+I    R    + A ++L E+R     P+       I   A+AG + +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
             +F     AG   ++  +  +I+   +  +Y +  +++  M+  G  PD+ I A VL
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDA-ITATVL 370



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 125/236 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +PS  AY  V+    +A + E A  +  +M  + +APD YT ++LIT   + G  
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT 205

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M++  V+ + V ++ +++   K      A      +++ GI P+ + +NT+
Sbjct: 206 ELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTL 265

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN  G+AK   EA  +++EMR  G+ PD  +Y+ ++  + +     +A  +F +M +  C
Sbjct: 266 INCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGC 325

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
             ++ T N++ID   +    +DA  +++ M+K GI P  ++   L ++ G+ +L G
Sbjct: 326 SANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKLSG 381


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 216/465 (46%), Gaps = 41/465 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS F  ++VL+ +L  ++W+ A  LF+EM   G+ PD +TY+ LI              W
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLI-------------HW 410

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             Q  + R                      +A+++F R+K +G+ P +  YN+++  + K
Sbjct: 411 HCQAHKLR----------------------EALNLFDRMKKAGVKPSINTYNSLLMGYCK 448

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L  EM  +G KP+ V+Y TL+  Y+    F  A ++  EM +     +  T
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT 508

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I+    +D   + D +  S    G  P++++YN+++  + +A + G A  +++ M+
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  N++TY + I  Y ++   + A  ++ +++ RG++P+ + Y+ +I  + + G + 
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A  L   L   G+  + V+Y ++I  Y+ + ++    +    + +   +   +  T L 
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLI 688

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              ++ G +  A  ++ +    G + D   F  +     R+       ++ E+MR     
Sbjct: 689 DGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR 748

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           P+  I  +++N Y +  + + A  L+ EM   G +  D   + +L
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMG-IQPDDTTYDIL 792



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 222/491 (45%), Gaps = 40/491 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  +    F Y  ++  +++  + E A  + DEMR  G   D    +TL+  +      
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEV 313

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A++  ++  +D +    V+Y  LI    ++    KA  +  ++   G++P     + +
Sbjct: 314 GNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLV 373

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +      + +K+A  L EEM + G+ PD  +Y+ L++ + + HK  EAL++F  M +   
Sbjct: 374 LKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGV 432

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T N ++  Y +     +A +L+  M   G  P+VV+Y TL+R Y   + F  A  
Sbjct: 433 KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492

Query: 251 LFRLMQRKEIEQN-----------------------------------VVTYNTMIKIYG 275
           L   M++  +  N                                   ++TYN++I  + 
Sbjct: 493 LLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+     A  + Q+M+ +G+ PN ITY++ I  + + G  D A  +   +R  G++ D V
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIV 612

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
            Y  +I  + + G ++HA +LL  L +    PNT+   + IT       ++E +  +   
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G V D S +  +I+ FS++   A  +E++ +M + GY PD+     + +   +  + 
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDI 732

Query: 452 ETADDLYSEMQ 462
           + A  L  EM+
Sbjct: 733 DGAKKLLEEMR 743



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 187/397 (47%), Gaps = 8/397 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF YN ++    +A +   A  LFD M++ G+ P   TY++L+  + K+G  D A+  
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458

Query: 77  LQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +M  +    ++V Y  L+   +A+K  D+  A ++   +K +G+  +   YN +IN  
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKK--DFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  E   +++    +G  P  ++Y++++N +V+      A +V+ +M E   P ++
Sbjct: 517 CMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNI 576

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T    ID Y +   +  A ++   +R+ G+ P +V+YN L+  + +      A+ L  +
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + +  +  N V YN++I  Y      ++ +   + M   GI  +  TY+T+I  + K G 
Sbjct: 637 LLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGN 696

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           +  A  L+ ++ + G   D   +  +     R G +  AK+LL E+R    +PN      
Sbjct: 697 VAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNM 756

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            I    R  +++EA  +  +  + G   D + +  ++
Sbjct: 757 LINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 170/365 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   PS+  YN +L    +    + A  L+ EM   G  P+  TY TL+  +  +  F
Sbjct: 428 KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDF 487

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D+A + L +M+Q+ VS +   Y+ LI     +    +   +     S G +P ++ YN++
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSI 547

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F KA +   A  + ++MRE+G+ P+ ++Y++ ++ Y        AL +  ++     
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+   N +I+ + Q      A +L   + K G+ P+ V YN+L+  Y    +  E   
Sbjct: 608 QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            +  M +  I  +  TY T+I  + K      A  L  EM  +G  P+A T++ +     
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++G +D A  L +++R   V  +  +Y  +I  Y R   +  A RL  E+      P +T
Sbjct: 728 RSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDT 787

Query: 371 AITIL 375
              IL
Sbjct: 788 TYDIL 792



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 213/515 (41%), Gaps = 43/515 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + +   +L    R    + A  LF EMR RG   D + +  L++   KEGM + A+  
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    +  D  +Y+  I    KL D  +A+ +   +K  G       Y TM++V  K
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  + +EMR+ G K D +  +TL+  Y    +   AL++F E  +         
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334

Query: 197 CNIMIDVYGQLDMA-----------------------------------KDADRLFWSMR 221
             ++I    Q+ M                                    KDA  LF  M 
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P V +YN L+  + +A    EA++LF  M++  ++ ++ TYN+++  Y K    +
Sbjct: 395 DSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L  EM   G +PN +TY T++  +      D A  L  +++ +GV  +   Y  +I
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
                V  V     +L        IP      + I    +AG +  A  V++Q  + G  
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLP 573

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +I  +   I+ + R       +++   +R  G  PD      ++N + +      A  L
Sbjct: 574 PNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQL 633

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
              + ++G   +  V+  +++ Y   K+ NM++ +
Sbjct: 634 LVILLKDGLAPNTVVYNSLITGY---KNLNMMKEV 665



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 35/328 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI--------TC--- 63
           + P+V  Y  ++R  +  K ++ A+ L DEM+Q G++ + YTY+ LI         C   
Sbjct: 467 FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVD 526

Query: 64  ------------------------FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELA 99
                                   F K GM  SA +  QQM +  +  +++ Y++ I+  
Sbjct: 527 GMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586

Query: 100 RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
            +      A+ + + ++  G+ PD+VAYN +IN F +      A  L+  + + G+ P+T
Sbjct: 587 CRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           V Y++L+  Y   +   E    +  M +     D +T   +ID + +      A  L+  
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSE 706

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M   G  P   ++  L      +     A  L   M+R ++  NV  YN +I  Y +  +
Sbjct: 707 MMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCK 766

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIA 307
            ++A  L  EM N GI+P+  TY  +++
Sbjct: 767 LQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/395 (21%), Positives = 167/395 (42%), Gaps = 40/395 (10%)

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           S A   ++ + + G+VPD+ +   ++    +    K+A  L  EMR +G + D   +  L
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           ++  ++                                     M +DA RLF  M    I
Sbjct: 199 MSACLKEG-----------------------------------MHEDAVRLFDEMPGAEI 223

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           DP    Y   +    +    G A+ + R M+    +    TY TM+ +  K+   E+A  
Sbjct: 224 DPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALR 283

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           +  EM++ G + + I  +T++  +    ++  A  LF++    G+    V+Y  +I   +
Sbjct: 284 VNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCD 343

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDIS 401
           +VG+   A  L  ++     +P    ++++ +      R ++A  +F +  D+G + D+ 
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVF 402

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I    +  K    + +F++M+ AG  P  +    +L  Y K    + A  LYSEM
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             EG   +   +  ++  Y A+KDF+   +L + +
Sbjct: 463 PMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 5/173 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   YN ++         +     ++ M + GI  D  TY+TLI  F K+G    A+ 
Sbjct: 643 APNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALE 702

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       D   ++ L     +  D   A  +   ++   + P++  YN +IN + 
Sbjct: 703 LYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYL 762

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           +    +EA  L +EM   G++PD  +Y  L+     + KF+EA +    +N +
Sbjct: 763 RDCKLQEAFRLHDEMLNMGIQPDDTTYDILV-----SKKFLEADNCADVLNPI 810


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/523 (22%), Positives = 242/523 (46%), Gaps = 7/523 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+VF YNV++  + R K+   A  +FDEM    +     TY+TLI  + K G  D+A   
Sbjct: 209 PNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKM 268

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M++  V+ +++ +++L+    K+    +A S+   ++ +G +PD   Y+ + +   +
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L E+  E+G++ +  + S LLN   +  K  +A  +  +  E     D   
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N  ++ Y ++     A      M   G+ P+ +++N+L+  + + +   +A    + M 
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K +  +V TYNT+I  YGK    ++   ++++M+  G++PN ++Y ++I    K GK+ 
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A ++ + +   GV  +  +Y  +I     VG V  A R   E+ +    P  +     I
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G++ EA     Q   +G   D+  +  +I  ++     +  + ++E M++ G  
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P       +++   K    E  + LY+EM +   +    V+  M+  Y    +     SL
Sbjct: 629 PTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687

Query: 493 FE-RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            +  LD   + +K   + ++ G + R  +L++   ++N M  +
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHF-REGKLSNIKDLVNNMKAK 729



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 216/453 (47%), Gaps = 5/453 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  + Y+++   +LR      A  L+++  ++GI  + YT S L+    K+G  + A 
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAE 371

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++  ++ +  D V+Y+  +    ++ D +KAI    R++S G+ P+ + +N++I+ F
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              K   +A   +++M E+GV P   +Y+TL++ Y +   F     +  +M E+    ++
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            +   +I+   +     +A+ +   M   G+ P+   YN L+          +A+  F  
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R EI   +VTYN +I    K  +  +A + + ++ + G  P+ ITY+++I+ +  AG 
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGN 611

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA--- 371
           + +   L++ +++ G++     Y  +I    + G +   ++L +E+ Q N +P       
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNA 670

Query: 372 -ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I   A  G  ++A  + +   D G   D   +  +I    R  K +N+ ++   M++  
Sbjct: 671 MIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKE 730

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             P +    +++  +  L++F  A   Y EM E
Sbjct: 731 LAPKADTYDILVKGHCDLKDFSGAYVWYREMVE 763



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 176/399 (44%), Gaps = 4/399 (1%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           S +S    +FS   +  I   +   + +++V  K+K+ +EA  L E MR  G  P  VS 
Sbjct: 85  STFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSL 144

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S L +  V   +FV+ + +F E+       D       I    +L   K       SMRK
Sbjct: 145 SLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRK 204

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P+V  YN L+      +   +A  +F  M    +  ++VTYNT+I  Y K  E + 
Sbjct: 205 RGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDA 264

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  + + M+ + + PN IT++++++   K  K+  A  L +++  +G   D   Y  +  
Sbjct: 265 AFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFD 324

Query: 343 AYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              R      A  L  +  +     N       +  L + G++E+A  + ++  + G V 
Sbjct: 325 GLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVA 384

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D  ++   +  + R       I   E+M S G  P+S     +++ +  ++E + A++  
Sbjct: 385 DEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
            +M E+G   S + +  ++  YG    F+    + E+++
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 207/482 (42%), Gaps = 39/482 (8%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           +++L    ++K    A  L++ MR+ G  P   + S L +C   E  F   +    ++E 
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D  +Y+  I+ A KL +    +     ++  G+ P++  YN +I    + K  ++
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  + +EM    +    V+Y+TL++ Y +  +   A  +   M E +   ++ T N ++ 
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSY----NTLLRV---YGEAELFGEA------- 248
              ++   K+A  L   M   G  P   +Y    + LLR     G  EL+ +A       
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349

Query: 249 ------IHLFRLMQRKEIEQ---------------NVVTYNTMIKIYGKSLEHEKATNLM 287
                 I L  L ++ ++E+               + V YNT +  Y +  +  KA   +
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           + M++ G+ PN+IT++++I  +    ++D+A    +K+   GV      Y T+I  Y ++
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                  ++L ++ +    PN +   + I  L + G+I EA  V R     G + +  V+
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+      K  + +  F++M  +   P      ++++   K  +   A+D  +++  
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 464 EG 465
            G
Sbjct: 590 SG 591



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 203/474 (42%), Gaps = 11/474 (2%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS-TLITCFGKEGMFDSAISWLQQ 79
           AY++    +L    +     LF       I P R T S  L++   K  M   A+   + 
Sbjct: 73  AYSLAKSLILTKSTFSSPSDLFSCFSACSI-PLRITLSDMLLSVCCKSKMLREAVELYEF 131

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M +D     LV  S L         + K + +F  +++SG   D   Y   I    K + 
Sbjct: 132 MRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQN 191

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            K     ++ MR++GV+P+   Y+ L+       +  +A  +F EM  +N    + T N 
Sbjct: 192 LKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNT 251

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID Y ++     A ++   M++  + P+++++N+LL    +     EA  L + M+   
Sbjct: 252 LIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNG 311

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
              +  TY+ +     +  +   A  L ++   +GI  N  T S ++    K GK+++A 
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAE 371

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
            + +K   +G+  D V+Y T +  Y R+G +  A   +  +     +PN+I   + I   
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431

Query: 376 ARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
                +++A  WV + A + G    +  +  +I+ + +   +    ++ E+M   G  P+
Sbjct: 432 CDMKEMDKAEEWVKKMA-EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPN 490

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML---SLYGARKD 485
                 ++N   K  +   A+ +  +M   G + + QV+  ++    + G  KD
Sbjct: 491 VVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 4/331 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   IL+ + EE    P+V +Y  ++  + +  +   A  +  +M  RG+ P+   Y+ L
Sbjct: 474 RCFQILEQM-EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A+ +  +M +  +S  LV Y+ LI+   K    ++A    +++ SSG 
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-LYVENHKFVEAL 179
            PD++ YN++I+ +  A    +   L E M+  G+KP   +Y  L++    E  + VE L
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKL 652

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + EM ++N   D    N MI  Y ++   + A  L   M   GI P  ++YN+L+  +
Sbjct: 653 --YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                      L   M+ KE+     TY+ ++K +    +   A    +EM      PNA
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNA 770

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
              + + A   + G+L    ++  ++   G+
Sbjct: 771 SICNELTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/342 (20%), Positives = 153/342 (44%), Gaps = 4/342 (1%)

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +YS   +L +    F     +F+  +  + PL +T  ++++ V  +  M ++A  L+  M
Sbjct: 73  AYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFM 132

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R+ G  PS+VS + L       + F + + LF  ++      +   Y   I+   K    
Sbjct: 133 RRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNL 192

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           +     +  M+ RG+ PN   Y+ +I    +  ++  A  +F ++ +  +    V Y T+
Sbjct: 193 KMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTL 252

Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y +VG +  A ++   +++    PN I   + ++ L +  +++EA  + ++    G 
Sbjct: 253 IDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGF 312

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + D   +  + +   R       +E++E+    G   +++  +++LN   K  + E A++
Sbjct: 313 MPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEE 372

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           +  +  E G V  + ++   ++ Y    D N      ER++S
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 140/628 (22%), Positives = 255/628 (40%), Gaps = 107/628 (17%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-------RGIAPDRYTYSTLITCF 64
           E +Y   +  YN +L ++ R        GL DEM+Q         + P+ YTY+ ++  +
Sbjct: 176 ELKYKLIIGCYNTLLNSLAR-------FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  + A  ++ ++ +  +  D   Y++LI    +  D   A  +F+ +   G   + 
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           VAY  +I+    A+   EA  L  +M++    P   +Y+ L+     + +  EAL++  E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M E     ++ T  ++ID        + A  L   M + G+ P+V++YN L+  Y +  +
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH------------------------ 280
             +A+ +  LM+ +++  N  TYN +IK Y KS  H                        
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 281 ----------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                     + A  L+  M +RG+ P+  TY+++I    K+ +++ A  LF  L   GV
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATW 386
             + V+Y  +I  Y + G V  A  +L ++   N +P       L       G+++EAT 
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588

Query: 387 V-----------------------------------FRQAFDAGEVKDISVFGCMIELFS 411
           +                                   F+Q   +G   D   +   I+ + 
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           R  +  +  ++  KMR  G  PD    + ++  YG L +   A D+   M++ GC  S  
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 472 VHFQMLS-----LYGARK-------------DFNMLESLFERLDSDS-NINKKELHHVVA 512
               ++       YG +K             +F+ +  L E++   S   N K    ++ 
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768

Query: 513 GIYERANRLNDASRIMNRMNKRRTFNSS 540
           GI E  N L  A ++ + M +    + S
Sbjct: 769 GICEVGN-LRVAEKVFDHMQRNEGISPS 795



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/521 (22%), Positives = 237/521 (45%), Gaps = 16/521 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P++  Y V++ ++    ++E A  L  +M ++G+ P+  TY+ LI  + K GM 
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  ++ ME  ++S +   Y+ LI+   K S+  KA+ + +++    ++PD+V YN++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   ++  F  A  L+  M ++G+ PD  +Y+++++   ++ +  EA  +F  + +   
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++     +ID Y +     +A  +   M      P+ +++N L+          EA  
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M +  ++  V T   +I    K  + + A +  Q+M + G +P+A TY+T I  + 
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G+L  A  +  K+R +GV  D   Y ++I  Y  +G    A  +L  +R     P + 
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             T L+    + E  +        G   ++     M+E       +  V+E+ EKM    
Sbjct: 709 --TFLSLIKHLLEMKY----GKQKGSEPELCAMSNMME-------FDTVVELLEKMVEHS 755

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQ-EEGCVFSDQVHFQMLSLYGARKDFNML 489
             P++     ++    ++     A+ ++  MQ  EG   S+ V   +LS     K  N  
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 490 ESLFERLDSDSNINKKELHHV-VAGIYERANRLNDASRIMN 529
             + + +    ++ + E   V + G+Y++  +    S   N
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 206/467 (44%), Gaps = 22/467 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E +  P V  YN ++    R+  ++ A+ L   M  RG+ PD++TY+++I    K    +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      +EQ  V+ ++V+Y+ LI+   K     +A  +  ++ S   +P+ + +N +I
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        KEA LL E+M + G++P   + + L++  +++  F  A S F +M      
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T    I  Y +     DA+ +   MR+ G+ P + +Y++L++ YG+      A  +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M+    E +  T+ ++IK     LE       M+  + +G EP     S ++     
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIK---HLLE-------MKYGKQKGSEPELCAMSNMM----- 739

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL-HELRQPNTIPRET 370
             + D    L +K+    V  +   Y+ +I+    VG +  A+++  H  R     P E 
Sbjct: 740 --EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797

Query: 371 A----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                ++   +  +  EA  V       G +  +     +I    +  +      VF+ +
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
              GY+ D     ++++  GK    E   +L++ M++ GC FS Q +
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 157/363 (43%), Gaps = 27/363 (7%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+   +P+V  Y  ++    +A + + AH + ++M  +   P+  T++ LI     +G  
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583

Query: 71  DSAISWLQQME----QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
             A    ++M     Q  VS D +L   L+    K  D+  A S F ++ SSG  PD   
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQQMLSSGTKPDAHT 639

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y T I  + +     +A  ++ +MRE GV PD  +YS+L+  Y +  +   A  V   M 
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699

Query: 187 EVNC-PLDLTTCNIMIDV----YGQ----------LDMAKDADRLFWSMRKM---GIDPS 228
           +  C P   T  +++  +    YG+          +    + D +   + KM    + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             SY  L+    E      A  +F  MQR E I  + + +N ++    K  +H +A  ++
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            +M   G  P   +   +I    K G+ +R   +FQ L   G   D + ++ +I    + 
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879

Query: 348 GLV 350
           GLV
Sbjct: 880 GLV 882


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 204/455 (44%), Gaps = 34/455 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V +YN ++       Q + A  L   M    + PD YTY+TLI      G  D+
Sbjct: 114 ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDN 170

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++ L  M +     D+V Y+ L+E   K S Y +A+ +   ++  G  PD+V YN ++N
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVN 230

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A   ++ +   G +P+TVSY+ +L       ++ +A  + AEM+    P 
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T N++I    +  + + A  +   + K G  P+ +SYN +L  + + +    A+   
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM       ++V+YNT++    +  E + A  L+ +++++G  P  I+Y+T+I    KA
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK + A  L  ++ + G++ D + Y T+                                
Sbjct: 411 GKTEEALELLNEMVTKGLQPDIITYSTISSG----------------------------- 441

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R GRIEEA   F +  D G   +  ++  ++    + +   + I++F  M S G  
Sbjct: 442 --LCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P+     +++         + A ++ +E+   G V
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 4/356 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD   YNT+I           A  ++++M  +G  PD V+Y+ LL    +   + +A+ +
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM +  C  D+ T N++++   Q     DA     S+   G +P+ VSYN +L+    
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           AE + +A  L   M RK    NVVT+N +I    +    E A  ++ ++   G  PN+++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ I+  + K  K+DRA    + + SSG   D V Y T++ A  R G V  A  LLH+L+
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 362 QPNTIP----RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P      T I  L +AG+ EEA  +  +    G   DI  +  +     R  +  
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             I+ F K++  G  P++ +   +L    K R   +A DL++ M   GC+ ++  +
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTY 505



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 2/146 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P + +YN V+  + +A + E A  L +EM  +G+ PD  TYST+ +   +EG  + AI 
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 76  WLQQMEQDRVSGDLVLYSN-LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              +++   +  + VLY+  L+ L ++ + +S AI +F+ + S+G +P+   Y  +I   
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHS-AIDLFTYMVSNGCMPNESTYTILIEGL 512

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTV 160
               L KEAR ++ E+  +GV   T+
Sbjct: 513 AYEGLVKEAREMMAELCSRGVVSKTL 538



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 29/211 (13%)

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N  +++  +  + E+A  L++ M   G+EP+A            AG     A L +KL +
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMA--GLEPSA------------AGP---CAALIKKLCA 102

Query: 328 SG-----------VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITIL 375
           SG            E D + Y  M+  Y   G + +A+RL+  +  +P+T    T I  L
Sbjct: 103 SGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGL 162

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              GR + A  V       G V D+  +  ++E   +   Y   +++ ++MR  G  PD 
Sbjct: 163 CGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDI 222

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGC 466
               +V+N   +    + A +    +   GC
Sbjct: 223 VTYNVVVNGICQEGRVDDAMEFLKSLPSYGC 253


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 203/466 (43%), Gaps = 51/466 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M     S  +V Y+ LI    K     +A  IF R+  +G  P+ V Y  +++  
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 135 GKA----KLFKEARLLIEEMRE------------QGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA    K F+    LI                   + P+ V+Y  L++   + HK   A
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +      A  +F  M K G  PSV +Y +L+ R
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M +     NVVTY  MI    +  E EKA  L+  M+ +G  P
Sbjct: 524 MFKDGRL-DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 582

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I   GKAGK+D +  LF ++   G   + V Y+ +I      GL+  A+ LL
Sbjct: 583 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E++Q                       W           K +  + C I+ FS  K + 
Sbjct: 643 GEMKQ---------------------TYW----------PKYLQGYRCAIQGFS--KSFI 669

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             + + E+M S G  P + +  ++++ + K    E A +L+ EM E
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 218/485 (44%), Gaps = 31/485 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q +L   +  EM + G   DR+T         KEG +  A 
Sbjct: 36  YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA- 94

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++    D VL +++I    + S + +A+S   R++ +  +P++V Y T+++ F
Sbjct: 95  --LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M  +G  P+   +++L++ Y     +  A  +   M    CP   
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 195 TTCNIMI-DVYGQ-----LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + GQ      D+   A++++  M       + V+     R       F +A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L + M RK    +  TY+ +I     + + EKA  L QEM+  G+ P+  TY+ +I  
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
           + KAG +++A  LF+++RS G     V Y  +I AY +   V  A  + H +     +PN
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKD----------------ISVFGCMIE 408
            +     +  L +AG I +A  V+ +     +  D                +  +G +++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  K  +  E+ + M S+G  P+  +   +++ + K  + ++A +++ +M +  C +
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK--CGY 510

Query: 469 SDQVH 473
              VH
Sbjct: 511 LPSVH 515



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 203/441 (46%), Gaps = 29/441 (6%)

Query: 8   WINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           W+ EE R    SP+V  Y  ++   L+AKQ   A+ +F  M   G  P+  TY  L+   
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 65  GKEGMF--------------DSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYSKA 108
            K G                DSA S      +DR  ++ ++V Y  L++   K      A
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   + SSG  P+ + Y+ +I+ F KA     A+ +  +M + G  P   +Y++L++ 
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +   A+ V ++M + +C  ++ T   MID   ++  ++ A +L   M + G  P+
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+Y  L+   G+A     ++ LF  M RK    N VTY  +I     +   +KA  L+ 
Sbjct: 584 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG 643

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERV 347
           EM+          Y    AI G +     +  + +++ S G V I PV Y  +I  + + 
Sbjct: 644 EMKQTYWPKYLQGYRC--AIQGFSKSFIASLGILEEMESYGTVPIAPV-YGMLIDCFSKA 700

Query: 348 GLVAHAKRLLHELRQ-PNTIPRE-----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           G +  A  L  E+ + P+++  +     + I  L  A ++EEA  ++ +    G V ++S
Sbjct: 701 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 402 VFGCMIELFSRNKKYANVIEV 422
           VF C+I+     KK+   +++
Sbjct: 761 VFVCLIKGLVEVKKWDEALQL 781



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/411 (20%), Positives = 158/411 (38%), Gaps = 39/411 (9%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           LK  G  P  V YN ++ V   A        + +EM E G   D  +     +   +  +
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           + +AL +   +   +  LD   C  MI    +     +A      MR     P+VV+Y T
Sbjct: 91  WADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL  + + +  G    +  +M  +    N   +N+++  Y    ++  A  L+  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 295 IEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
             P  + Y+  I +I G+           +KL S                     L+  A
Sbjct: 208 CPPGYVVYNIFIGSICGQ-----------EKLPSPD-------------------LLDLA 237

Query: 354 KRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           +++  E+   N +  +  +   AR     G+ ++A  + ++    G V D S +  +I  
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
                K      +F++M+  G  PD +   ++++S+ K    E A  L+ EM+  GC  +
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 357

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIYERAN 519
              +  ++  Y   K       +F R+ D+    N      +V G+ +  N
Sbjct: 358 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 203/466 (43%), Gaps = 51/466 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M     S  +V Y+ LI    K     +A  IF R+  +G  P+ V Y  +++  
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 135 GKA----KLFKEARLLIEEMRE------------QGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA    K F+    LI                   + P+ V+Y  L++   + HK   A
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +      A  +F  M K G  PSV +Y +L+ R
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M +     NVVTY  MI    +  E EKA  L+  M+ +G  P
Sbjct: 524 MFKDGRL-DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 582

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I   GKAGK+D +  LF ++   G   + V Y+ +I      GL+  A+ LL
Sbjct: 583 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E++Q                       W           K +  + C I+ FS  K + 
Sbjct: 643 GEMKQ---------------------TYW----------PKYLQGYRCAIQGFS--KSFI 669

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             + + E+M S G  P + +  ++++ + K    E A +L+ EM E
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 218/485 (44%), Gaps = 31/485 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q +L   +  EM + G   DR+T         KEG +  A 
Sbjct: 36  YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA- 94

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++    D VL +++I    + S + +A+S   R++ +  +P++V Y T+++ F
Sbjct: 95  --LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M  +G  P+   +++L++ Y     +  A  +   M    CP   
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 195 TTCNIMI-DVYGQ-----LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + GQ      D+   A++++  M       + V+     R       F +A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L + M RK    +  TY+ +I     + + EKA  L QEM+  G+ P+  TY+ +I  
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
           + KAG +++A  LF+++RS G     V Y  +I AY +   V  A  + H +     +PN
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKD----------------ISVFGCMIE 408
            +     +  L +AG I +A  V+ +     +  D                +  +G +++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  K  +  E+ + M S+G  P+  +   +++ + K  + ++A +++ +M +  C +
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK--CGY 510

Query: 469 SDQVH 473
              VH
Sbjct: 511 LPSVH 515



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 203/441 (46%), Gaps = 29/441 (6%)

Query: 8   WINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           W+ EE R    SP+V  Y  ++   L+AKQ   A+ +F  M   G  P+  TY  L+   
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 65  GKEGMF--------------DSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYSKA 108
            K G                DSA S      +DR  ++ ++V Y  L++   K      A
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   + SSG  P+ + Y+ +I+ F KA     A+ +  +M + G  P   +Y++L++ 
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +   A+ V ++M + +C  ++ T   MID   ++  ++ A +L   M + G  P+
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+Y  L+   G+A     ++ LF  M RK    N VTY  +I     +   +KA  L+ 
Sbjct: 584 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG 643

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERV 347
           EM+          Y    AI G +     +  + +++ S G V I PV Y  +I  + + 
Sbjct: 644 EMKQTYWPKYLQGYRC--AIQGFSKSFIASLGILEEMESYGTVPIAPV-YGMLIDCFSKA 700

Query: 348 GLVAHAKRLLHELRQ-PNTIPRE-----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           G +  A  L  E+ + P+++  +     + I  L  A ++EEA  ++ +    G V ++S
Sbjct: 701 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 402 VFGCMIELFSRNKKYANVIEV 422
           VF C+I+     KK+   +++
Sbjct: 761 VFVCLIKGLVEVKKWDEALQL 781



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/411 (20%), Positives = 158/411 (38%), Gaps = 39/411 (9%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           LK  G  P  V YN ++ V   A        + +EM E G   D  +     +   +  +
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
           + +AL +   +   +  LD   C  MI    +     +A      MR     P+VV+Y T
Sbjct: 91  WADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL  + + +  G    +  +M  +    N   +N+++  Y    ++  A  L+  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 295 IEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
             P  + Y+  I +I G+           +KL S                     L+  A
Sbjct: 208 CPPGYVVYNIFIGSICGQ-----------EKLPSPD-------------------LLDLA 237

Query: 354 KRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           +++  E+   N +  +  +   AR     G+ ++A  + ++    G V D S +  +I  
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
                K      +F++M+  G  PD +   ++++S+ K    E A  L+ EM+  GC  +
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 357

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIYERAN 519
              +  ++  Y   K       +F R+ D+    N      +V G+ +  N
Sbjct: 358 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408


>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 179/362 (49%), Gaps = 3/362 (0%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  + S ++  GI P    YN  ++   KA+  ++A  + + M+ +  + +T +Y+ ++
Sbjct: 32  RAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLMI 91

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           N+Y ++ + + A+ VF EM  + C  ++ T   +++ + +  + + A+ +F  M++ G +
Sbjct: 92  NVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHE 151

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P V +YN L+  Y  A     A  +F LMQ    E +  +YN ++  YG++  H +A  +
Sbjct: 152 PDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAV 211

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            + ++ +G+ P   ++  ++A   ++G + R   +  +L  SG+  D +    M+ AY R
Sbjct: 212 FESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGR 271

Query: 347 VGLVAHAKRLLHELRQPNTIPRET---AITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            G +   +RLL  + +  T    T   A+    RAG +E     F      G   D+  +
Sbjct: 272 AGRLDDMERLLAAMERRGTRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTW 331

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
              +  ++R K+Y   +E+FE+M  AG +PD+    +++ +    R+ E    +   M +
Sbjct: 332 TSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQVTAIVRSMHK 391

Query: 464 EG 465
           E 
Sbjct: 392 EA 393



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 7/383 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EAR  P+   Y ++LR    A     A G+  EMR+ GI P    Y+  +    K    +
Sbjct: 7   EARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAE 66

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+   Q+M+++R   +   Y+ +I +  K      A+ +F  ++S G   ++  Y  ++
Sbjct: 67  KAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALV 126

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS-VFAEMNEVNC 190
           N F +  L ++A  + EEM++ G +PD  +Y+ L+  Y     F +A S +F+ M  + C
Sbjct: 127 NAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY-SRAGFPQAASEIFSLMQHMGC 185

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  + NI++D YG+  + ++A+ +F S+++ G+ P++ S+  LL  +  +        
Sbjct: 186 EPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEE 245

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   + +  +  + +  N M+  YG++   +    L+  M+ RG   +  TY+  +  +G
Sbjct: 246 VMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAYG 304

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           +AG L+R    F  L   G+  D V + + + AY R         +  E+      P   
Sbjct: 305 RAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAG 364

Query: 371 AITILARAG----RIEEATWVFR 389
              +L  A     ++E+ T + R
Sbjct: 365 TAKVLVAACSDERQVEQVTAIVR 387



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/282 (18%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A + P V+AYN ++    RA   + A  +F  M+  G  PDR +Y+ L+  +G+ G+ 
Sbjct: 146 QQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLH 205

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +  + +++  ++  +  +  L+    +  + ++   + ++L  SG+ PD +A N M
Sbjct: 206 REAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAM 265

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N +G+A    +   L+  M  +G +                                  
Sbjct: 266 LNAYGRAGRLDDMERLLAAMERRGTR---------------------------------- 291

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T N+ ++ YG+    +  +  F S+ + G+   VV++ + +  Y   + +   + 
Sbjct: 292 --DVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLE 349

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +F  M       +  T   ++       + E+ T +++ M  
Sbjct: 350 IFEEMVDAGCYPDAGTAKVLVAACSDERQVEQVTAIVRSMHK 391



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 33/269 (12%)

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY  +++ Y  +    +A  ++ EM+  GI P+A  Y+  +    KA   ++A  ++Q++
Sbjct: 16  TYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRM 75

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
           +      +   Y  MI  Y +              +QP +                  A 
Sbjct: 76  KRERCRTNTETYTLMINVYGKS-------------KQPMS------------------AM 104

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            VF++    G   +I  +  ++  F+R        EVFE+M+ AG+ PD +    ++ +Y
Sbjct: 105 KVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 164

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINK 504
            +    + A +++S MQ  GC   D+  + +L   YG        E++FE L        
Sbjct: 165 SRAGFPQAASEIFSLMQHMGCE-PDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPT 223

Query: 505 KELHHVVAGIYERANRLNDASRIMNRMNK 533
            + H ++   + R+  +     +M +++K
Sbjct: 224 MKSHMLLLAAHARSGNVARCEEVMAQLHK 252


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 220/484 (45%), Gaps = 44/484 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWE-------LAHGLFDEMRQRGI---A 51
           ++ + D +   AR S SV A+N VL  V              LA  LF+ M Q G+   A
Sbjct: 33  ALNLFDELLPRAR-SASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLA 91

Query: 52  PDRYTYSTLITCFGKEGMFDSAI--------SWLQQMEQD--RVSGDLVLYSNLIELARK 101
            D  T+  LI CF   G+ D A+        + +  M  D      +++ Y+ +I    K
Sbjct: 92  TDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFK 151

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  KA ++F  +   G  P++V YN++I+   KA+   +A  ++++M ++G       
Sbjct: 152 EGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG------- 204

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
                       +  EA+ +  +M+      D+ T +++ID Y ++    +A  +F SM 
Sbjct: 205 ------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G +P   +Y TLL  Y       +   L  LM +  I      +N +I+ Y K+   +
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA     EM+ +G  PN +TY+T+I I  KAG+++ A   F ++ S G+  D + + ++I
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 342 VAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
                +G     ++L  E+      PN I   T +  L + GR+ EA   F Q    G  
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +I+ +  + K    I++  +M S G  PD+   + +LN Y K    + A  L
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492

Query: 458 YSEM 461
           Y EM
Sbjct: 493 YREM 496



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 232/555 (41%), Gaps = 109/555 (19%)

Query: 2   SVAILDW-INEEARYS---------------PSVFAYNVVLRNVLRAKQWELAHGLFDEM 45
           +V +LD+ + EE+R S               P+V +YN+V+  + +  + + A+ LF EM
Sbjct: 106 NVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEM 165

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
             +G  P+  TY+++I    K    D A + LQQM      G L                
Sbjct: 166 LGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD---KGQL---------------- 206

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
            +A+ +  ++   G+ PD+V Y+ +I+ + K     EAR + + M  +G  PD  +Y TL
Sbjct: 207 EEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTL 266

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           L+ Y      V+   + A M +   PL+    NI+I  Y + +    A   F  MR+ G 
Sbjct: 267 LHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGF 326

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+VV+Y T++ +  +A    +A+  F  M  + +  +++T+ ++I       E +K   
Sbjct: 327 SPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEK 386

Query: 286 LMQEMQNRGIEPNAI-----------------------------------TYSTIIAIWG 310
           L  EM NRGI PNAI                                   +Y+ +I  + 
Sbjct: 387 LSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYC 446

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
             GK+D +  L  ++ S G+  D V Y  ++  Y + G V  A  L  E+     +PN I
Sbjct: 447 LDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAI 506

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +  L  AGR+  A   + +  D+G    I+ +  ++     N      + +F+ +
Sbjct: 507 TYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGL 566

Query: 427 RS-----------------------------------AGYFPDSHIIALVLNSYGKLREF 451
           RS                                   +G  PD+ I  L++ S+ +    
Sbjct: 567 RSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLL 626

Query: 452 ETADDLYSEMQEEGC 466
           E +D+L+  M++ GC
Sbjct: 627 EESDELFLSMEKNGC 641



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 169/356 (47%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N+++R   + +  + A   F EMRQ+G +P+  TY+T+I    K G  + A+S   QM 
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            + +S D++ +++LI     + ++ K   +   + + GI P+ +  NT+++   K     
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA    +++   GVKPD VSY+ L++ Y  + K  E++ +   M  +    D  T + ++
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + Y +     DA  L+  M    + P+ ++YN +L     A     A   +  +    I+
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             + TYN ++    ++   ++A  + Q ++++  +    T++ +I    K G++  A  L
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           F  +  SG+  D ++Y  MI ++   GL+  +  L   + +         +  + R
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVR 653



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 138/310 (44%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +  +  ++  +    +W+    L  EM  RGI P+    +T++    KEG    A  
Sbjct: 362 SPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHD 421

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +  Q+    V  D+V Y+ LI+         ++I +  R+ S G+ PD V Y+ ++N + 
Sbjct: 422 FFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYC 481

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     +A  L  EM  + VKP+ ++Y+ +L+      + V A   + ++ +    L + 
Sbjct: 482 KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGIN 541

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T NI++    +     +A R+F  +R       V ++N ++    +    G+A  LF  +
Sbjct: 542 TYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAI 601

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  + + Y  MI+ + +    E++  L   M+  G   N+ T + I+    + G +
Sbjct: 602 LPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDV 661

Query: 316 DRAAMLFQKL 325
            RA     K+
Sbjct: 662 RRAGTYLTKI 671



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 82/187 (43%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN++L  +  A +   A   + ++   GI     TY+ ++    +    D A+  
Sbjct: 503 PNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRM 562

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q +       ++  ++ +I    K+     A S+FS +  SG+VPD + Y  MI    +
Sbjct: 563 FQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIE 622

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             L +E+  L   M + G   ++ + + ++   +E      A +   +++E    ++ +T
Sbjct: 623 EGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST 682

Query: 197 CNIMIDV 203
             ++I +
Sbjct: 683 AVLLISI 689


>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
          Length = 633

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 205/430 (47%), Gaps = 27/430 (6%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + Y  +++  LR+++      ++++MR++G   D + Y+ L+    K GM D A    + 
Sbjct: 184 YTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFED 243

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M+Q+    D   Y+ LI ++ K    +K +S+   + S G V +L+AYNT+I   GK K+
Sbjct: 244 MKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKM 303

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA  ++ +M E   +P+  +YS +L++          LS   +++ +N  LD+ +  +
Sbjct: 304 VDEAIFMLSKMIESDCRPNQFTYSIMLDV----------LSTGGQLHRLNEILDICSGCL 353

Query: 200 MIDVYGQL-------DMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              VY  L         A +A  +F   W+  + G   + VS   +L     AE   EAI
Sbjct: 354 NRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVS---MLEALCNAEKTTEAI 410

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L  +M  K I  +V  YN +    GK  +    ++L   M+  G+ P+  TY+ +I+ +
Sbjct: 411 DLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSF 470

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
           G+ G +D+A+ LF+++     + D V Y +MI    + G +  A  L  ++++    P+ 
Sbjct: 471 GRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDV 530

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
                 I    ++ +++ A  +F +    G + +I  +  +++   R  K     + +E 
Sbjct: 531 FTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYET 590

Query: 426 MRSAGYFPDS 435
           ++  G  PDS
Sbjct: 591 LKQQGLTPDS 600



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 180/395 (45%), Gaps = 32/395 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y   +FAYN++L  + +A   + A+ +F++M+Q    PD YTY+ LI   GK G     +
Sbjct: 214 YKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFV 273

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L++M  +    +L+ Y+ +IE   K     +AI + S++  S   P+   Y+ M++V 
Sbjct: 274 SLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVL 333

Query: 135 G--------------------------------KAKLFKEARLLIEEMREQGVKPDTVSY 162
                                            K+    EA  +   M     K D  ++
Sbjct: 334 STGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAF 393

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            ++L       K  EA+ +   M E     D+   N++    G+L        L+ +MR 
Sbjct: 394 VSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRA 453

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P V +YN ++  +G   L  +A  LF  M+    + +VVTYN+MI   GK+ + ++
Sbjct: 454 NGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDE 513

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L ++MQ +G +P+  TYS +I  +GK+ K+D A  LF ++ + G   + V Y  ++ 
Sbjct: 514 AHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLD 573

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
             ER G    A +    L+Q    P     +IL R
Sbjct: 574 CLERRGKTTEAHKFYETLKQQGLTPDSITYSILER 608



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 195/456 (42%), Gaps = 20/456 (4%)

Query: 20  FAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE--GMFDSAIS 75
           F+YN +L  +   RA   E A  L  EM + G+ P   +   L+   G E     D A  
Sbjct: 119 FSYNRILVLLFSNRADPAE-AMRLIAEMERDGV-PGNISTVNLLVGMGVEVGRCLDLASK 176

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           W       R++G    Y  L++   +  +  K   ++ +++  G   D+ AYN ++N   
Sbjct: 177 W-----GLRLNG--YTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALA 229

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA +  +A  + E+M++    PD  +Y+ L+ +  +  K  + +S+  EM    C L+L 
Sbjct: 230 KAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLI 289

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I+  G+  M  +A  +   M +    P+  +Y+ +L V       G+   L  ++
Sbjct: 290 AYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTG---GQLHRLNEIL 346

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  N   Y+ +IK   KS    +A ++   M N   + +   + +++     A K 
Sbjct: 347 DICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKT 406

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
             A  L   +   G+  D  +Y  +  A  ++  V+    L   +R    +P        
Sbjct: 407 TEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIM 466

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I+   R G +++A+ +F +  D     D+  +  MI    +N        +F+ M+  GY
Sbjct: 467 ISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGY 526

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD    ++++  +GK  + + A  L+ EM  +GC+
Sbjct: 527 DPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCI 562



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 136/273 (49%), Gaps = 3/273 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++ + ++     AH +F  M       DRY + +++           AI  L  M 
Sbjct: 358 YSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMP 417

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  ++ D+ +Y+ +     KL   S   S++  ++++G+VPD+  YN MI+ FG+  L  
Sbjct: 418 EKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVD 477

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L EEM +   KPD V+Y++++N   +N    EA  +F +M E     D+ T +I+I
Sbjct: 478 KASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILI 537

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +    A  LF  M   G  P++V+YN LL          EA   +  ++++ + 
Sbjct: 538 ECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLT 597

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
            + +TY+ + ++  +S   ++   + +  +N G
Sbjct: 598 PDSITYSILERLESRS---QRTVRIRKPSRNTG 627



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN++   + + KQ      L+D MR  G+ PD +TY+ +I+ FG+ G+ D A    +
Sbjct: 425 VGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFE 484

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +ME                                        PD+V YN+MIN  GK  
Sbjct: 485 EMEDGSCK-----------------------------------PDVVTYNSMINCLGKNG 509

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
              EA +L ++M+E+G  PD  +YS L+  + +++K   A S+F EM    C  ++ T N
Sbjct: 510 DLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYN 569

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           I++D   +     +A + + ++++ G+ P  ++Y+ L R+
Sbjct: 570 ILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERL 609



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/441 (18%), Positives = 197/441 (44%), Gaps = 13/441 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L+ L    +D ++A+ + + ++  G+  ++   N ++       +  E    ++   + G
Sbjct: 125 LVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLVG------MGVEVGRCLDLASKWG 178

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           ++ +  +Y  L+  ++ + +  +   V+ +M      LD+   N++++   +  M   A 
Sbjct: 179 LRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAY 238

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           ++F  M++   DP   +Y  L+R+ G+A    + + L   M  +    N++ YNT+I+  
Sbjct: 239 QVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEAL 298

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           GK+   ++A  ++ +M      PN  TYS ++ +    G+L R   +      SG    P
Sbjct: 299 GKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDI--CSGCLNRP 356

Query: 335 VLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y  +I A  + G  + A     R+ +   + +     + +  L  A +  EA  +   
Sbjct: 357 V-YSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHM 415

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             + G   D+ ++  +     + K+ + +  +++ MR+ G  PD     ++++S+G++  
Sbjct: 416 MPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGL 475

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHV 510
            + A +L+ EM++  C      +  M++  G   D +    LF+ +           + +
Sbjct: 476 VDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSI 535

Query: 511 VAGIYERANRLNDASRIMNRM 531
           +   + ++N+++ A  + + M
Sbjct: 536 LIECFGKSNKVDMACSLFDEM 556



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 83/160 (51%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF YN+++ +  R    + A  LF+EM      PD  TY+++I C GK G  D A   
Sbjct: 458 PDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHML 517

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M++     D+  YS LIE   K +    A S+F  + + G +P++V YN +++   +
Sbjct: 518 FKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLER 577

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
                EA    E +++QG+ PD+++YS L  L   + + V
Sbjct: 578 RGKTTEAHKFYETLKQQGLTPDSITYSILERLESRSQRTV 617



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y P VF Y++++    ++ + ++A  LFDEM  +G  P+  TY+ L+ C  + G  
Sbjct: 522 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKT 581

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNL 95
             A  + + ++Q  ++ D + YS L
Sbjct: 582 TEAHKFYETLKQQGLTPDSITYSIL 606


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 177/363 (48%), Gaps = 35/363 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF Y  +L    +A + + A  +F+EMR  G  P+  T++ LI   G  G F   +  
Sbjct: 102 PDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKV 161

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + ++  + S D+V ++ L+ +  +    S+   +F  +K +G VP+   +NT+I+ + +
Sbjct: 162 FEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSR 221

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLDLT 195
              F +A  + + M E GV PD  SY+ +L        + ++  V AEM +  C P +LT
Sbjct: 222 CGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELT 281

Query: 196 TCNI----------------------------------MIDVYGQLDMAKDADRLFWSMR 221
            C++                                  ++ V  + D+  + +R F  +R
Sbjct: 282 YCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELR 341

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G  P + + N ++ +YG  ++  +A  +   M+R     ++ TYN+++ +Y +S   E
Sbjct: 342 QRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFE 401

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           ++  +++E+  +GI P+ I+Y+T+I  + + G++  A+ +  ++R SG   D + Y T I
Sbjct: 402 RSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFI 461

Query: 342 VAY 344
            +Y
Sbjct: 462 ASY 464



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 209/440 (47%), Gaps = 21/440 (4%)

Query: 31  RAKQWELAHG---------LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           R K W  +HG         L ++M ++GI PD +TY+TL++ F K G   +A+   ++M 
Sbjct: 74  RGKPW--SHGRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR 131

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            +    ++  ++ LI++      +++ + +F  +K+    PD+V +NT+++VFG+  +  
Sbjct: 132 NEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDS 191

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           E   + +EM+  G  P+  +++TL++ Y     F +A++V+  M E     DL++ N ++
Sbjct: 192 EVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVL 251

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               +  + K ++++   M+     P+ ++Y +LL  Y   +       L   +    IE
Sbjct: 252 AALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIE 311

Query: 262 QNVVTYNTMIKIYGKS---LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
              V   T++ +  K    +E E+A     E++ RG  P+  T + +++I+G+   + +A
Sbjct: 312 PRAVLLKTLVLVNSKCDLLMETERA---FLELRQRGFSPDITTLNAMVSIYGRRQMVAKA 368

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             +   ++  G       Y +++  Y R      ++ +L E+     +P+ I   T I  
Sbjct: 369 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYA 428

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             R GR+ +A+ V  +  ++G   DI  +   I  ++ +  +   I+V   M   G  P+
Sbjct: 429 YCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 488

Query: 435 SHIIALVLNSYGKLREFETA 454
                 +++ Y KL   + A
Sbjct: 489 QSTYNSIVDWYCKLNRRDEA 508



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/431 (22%), Positives = 206/431 (47%), Gaps = 6/431 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ + +++   GI PD+  Y T+++ F KA   K A  + EEMR +G KP+  +++ L+ 
Sbjct: 88  ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           ++    KF E + VF ++    C  D+ T N ++ V+GQ  M  +   +F  M++ G  P
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              ++NTL+  Y     F +A+ +++ M    +  ++ +YN ++    +    +++  ++
Sbjct: 208 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 267

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM++   +PN +TY +++  +    +++R   L +++ S  +E   VL +T+++   + 
Sbjct: 268 AEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKC 327

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            L+   +R   ELRQ    P+       ++I  R   + +A  +       G    ++ +
Sbjct: 328 DLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTY 387

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++ ++SR+  +    E+  ++ + G  PD      V+ +Y +      A  + SEM+E
Sbjct: 388 NSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRE 447

Query: 464 EGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
            G       +   ++ Y A   F   ++ +   +      N+   + +V   Y + NR +
Sbjct: 448 SGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIV-DWYCKLNRRD 506

Query: 523 DASRIMNRMNK 533
           +AS  +N + K
Sbjct: 507 EASMFVNNLRK 517


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 210/452 (46%), Gaps = 14/452 (3%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N  L  ++RA Q   A  LF E R     P+ +TY +LI    K G  D A   L +M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +   + +++ +I+   K   +  A+  F  +  +   PD++ +N +++   K+   +E
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 143 ARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           A  + E M       P+ V+Y+T++N   ++ K   A+ +   MNE  C  ++ T ++++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +   +         L   M + G  P V+ YNTLL    ++    EA+ L +LM R    
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             VVTYN++++++ +S + ++A  L+Q M  RG  P+ I Y+T+IA   +  +LD A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYE---RVGL---VAHAKRLLHELRQ----PNTIPRETA 371
            +++ ++    D + Y T+I       RV     +  A  +L  ++Q    PN       
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L RA + ++A  + R+  D+  V D+S F  +I    ++       ++F  M     
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            P+    A +++   K  E + A  ++  M E
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 204/441 (46%), Gaps = 19/441 (4%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I + ++  ++  P+V  Y  V+  + +  + + A  L D M + G  P+  TYS L+   
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  D   + LQ+M +     D+++Y+ L+    K     +A+ +   +  SG  P +
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN+++ +F ++K    A  LI+ M E+G  PD ++Y+T++     + +  +A ++  +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDAD-------RLFWSMRKMGIDPSVVSYNTLLR 237
           M    C  D+ T + +ID   + D   DAD        +   M++ G  P+  +Y  ++ 
Sbjct: 302 MVAARCVPDVITYSTIIDGLCK-DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
               A    +A+ L R M   E+  ++ +++ +I    KS + + A  +   M  R  +P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSS---GVEIDPVLYQTMIVAYERVGLVAHAK 354
           N + Y+ +I    K G++D+A  +F+ +  S   GV      Y +++     VG +  A 
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVAT----YNSVLDGLCGVGRIEEAV 476

Query: 355 RLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           R++  +      P   +    I  L R   +EEA  +F+     G   ++ V+  ++   
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536

Query: 411 SRNKKYANVIEVFEKMRSAGY 431
            + K+ ++   V  K+  AGY
Sbjct: 537 CKKKRLSDAHGVANKLIEAGY 557



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 34/174 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + ++++V+ ++ ++   + A+ +F  M +R   P+   Y+ LI    K G  D A+  
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 77  LQQMEQ-------------DRVSG---------------------DLVLYSNLIELARKL 102
            + M +             D + G                     D   Y  LI    ++
Sbjct: 445 FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           S   +A  +F  +++ G   ++  YN ++N   K K   +A  +  ++ E G K
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 219/445 (49%), Gaps = 5/445 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA++D +  E +Y P+V   N ++  +    +   A  L D M + G   +  TY  ++
Sbjct: 158 AVALVDRM-VEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVL 216

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G    A+   ++ME+  +   +V YS +I+   K  +   A+S+F+ ++  GI 
Sbjct: 217 NRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIK 276

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+VAY+++I        + +   ++ EM  + + P+ V++S L++++V+  K +EA  +
Sbjct: 277 ADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKEL 336

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + EM       D  T + +ID + + +   +A+++   M   G +P++V+Y+ L+  Y +
Sbjct: 337 YNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCK 396

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+     + LF  +  K +  + VTYNT+++ + +S +   A  L QEM +RG+ P+ +T
Sbjct: 397 AKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVT 456

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y  ++      G+L +A  +F+K++ S + +   +Y  +I        V  A  L   L 
Sbjct: 457 YGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLS 516

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+ +     I  L + G + EA  +FR+  + G       +  +I          
Sbjct: 517 VKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVI 576

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVL 442
           + +E+ E+M+  G+  D+  I +V+
Sbjct: 577 SSVELIEEMKMRGFAADASTIKMVV 601



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 222/501 (44%), Gaps = 39/501 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  ++ +   V R K+++L  G   EM   GI  + YT + +I CF ++    
Sbjct: 62  QSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLL 121

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S + +  +     + + +S LI         S+A+++  R+      P++V  NT+I
Sbjct: 122 FAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLI 181

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EA +LI+ M + G + + ++Y  +LN   ++     AL +F +M E +  
Sbjct: 182 NGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIK 241

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +   +I+ID   +     DA  LF  M   GI   VV+Y++++        + +   +
Sbjct: 242 ASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M  + I  NVVT++ +I ++ K  +  +A  L  EM  RGI P+ ITYS++I  + K
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             +L  A  +   + S G E + V Y  +I +Y +   V +  RL  E+       +T+ 
Sbjct: 362 ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVT 421

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T +    ++G++  A  +F++    G    +  +G +++    N +    +E+FEKM+
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQ 481

Query: 428 SA-----------------------------------GYFPDSHIIALVLNSYGKLREFE 452
            +                                   G  PD     +++    K     
Sbjct: 482 KSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLS 541

Query: 453 TADDLYSEMQEEGCVFSDQVH 473
            AD L+ +M+E+GC  SD  +
Sbjct: 542 EADMLFRKMKEDGCAPSDCTY 562



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/464 (20%), Positives = 184/464 (39%), Gaps = 66/464 (14%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + AI   + M Q R    L+ +S L     +  +Y   +     +  +GI  ++   N M
Sbjct: 51  NEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIM 110

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F + +    A  ++    + G +P+T+++STL+N +    +  EA+++         
Sbjct: 111 INCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVAL--------- 161

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                  DR    M +M   P+VV+ NTL+          EA+ 
Sbjct: 162 ----------------------VDR----MVEMKYRPNVVTVNTLINGLCLKGRVTEALV 195

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M +   E N +TY  ++    KS     A +L ++M+ R I+ + + YS +I    
Sbjct: 196 LIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLC 255

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G LD A  LF ++   G++ D V Y ++I      G      ++L E+   N IP   
Sbjct: 256 KDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP--- 312

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                                       ++  F  +I++F +  K     E++ +M + G
Sbjct: 313 ----------------------------NVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
             PD+   + +++ + K      A+ +   M  +GC  +   +  +++ Y   K  +   
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGM 404

Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            LF  + S   +     ++ +   + ++ +LN A  +   M  R
Sbjct: 405 RLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 57/131 (43%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +++R    +  YN+++  +  A + + A  LF  +  +G+ PD  TY+ +I    K+G  
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSL 540

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    ++M++D  +     Y+ LI      S    ++ +   +K  G   D      +
Sbjct: 541 SEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMV 600

Query: 131 INVFGKAKLFK 141
           + +    +L K
Sbjct: 601 VVMLSDGRLDK 611


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 233/518 (44%), Gaps = 44/518 (8%)

Query: 6   LDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            D +N+  ++  +PS+F YN ++ ++ +  + + A  LF+ M  +G+ P+  TYS LI  
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F K G  D A+ +L +M +  +   +  YS+LI    KL     A S+F  + ++G+ P+
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V Y ++I+ + K      A  L  EM  +G+ P+T +++ L++     ++  EA  +F 
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY----------- 232
           EM E N   +  T N++I+ + +      A  L   M + G+ P   +Y           
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 233 ------------------------NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
                                   + LL  Y +     +A+   R M  + +  ++V Y+
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYS 639

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            +I    +  +     +L+++M ++G+ P+ + Y+T+I    KAG L  A  L+  + S 
Sbjct: 640 VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSE 699

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEA 384
           G   + V Y  +I    ++GL+  A+ L  E+   N++P +      +  L   G IE+A
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +     + G + +   +  +I  F +  +     EV   M  +G  PD    + ++  
Sbjct: 760 IQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           Y +  + + A  L+  M   G V  D V +  L +YG 
Sbjct: 819 YCRRGDLKEAIKLWESMLNRG-VNPDTVAYNFL-IYGC 854



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 209/468 (44%), Gaps = 48/468 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +   + VL  ++R +Q+ +A  LFDE+   G+ PD Y Y+ ++               
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV--------------- 222

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                            +L EL     D+ +A  +  R++SSG    +  YN  I    K
Sbjct: 223 ----------------RSLCEL----KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLT 195
            +   EA  +   +  +G++ D  +Y TL+    +  +F     +  EM E    P +  
Sbjct: 263 NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N++  +  + ++    D L   ++K G+ PS+  YN L+    +     EA  LF  M
Sbjct: 323 VSNLVDGLRKKGNIGSAFD-LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  N VTY+ +I  + K  + + A + + +M   GI+     YS++I+   K GKL
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A  LF ++ ++G++ + V+Y ++I  Y + G + +A RL HE+      PNT      
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I+ L  A R+ EA  +F +  +   + +   +  +IE   +        E+ ++M   G 
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 432 FPDSHIIALV---LNSYGKLREF-ETADDLYSEMQE--EGCVFSDQVH 473
            PD++    +   L S G++ E  E  +DL  E Q+  E C FS  +H
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC-FSALLH 608



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 1/351 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YNV++    +      A  L DEM ++G+ PD YTY  LI+     G    A  +
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  ++ ++   + + +S L+    K      A+     +   G+  DLV Y+ +I    +
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +  +    L+++M +QG++PD V Y+T+++   +      A  ++  M    C  ++ T
Sbjct: 648 QQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+   ++ +   A+ L   M      P+  +Y   L          +AI L  ++ 
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N VTYN +I+ + K    ++A  ++  M + GI P+ I+YSTII  + + G L 
Sbjct: 768 EGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            A  L++ + + GV  D V Y  +I      G +  A  L  ++ +    P
Sbjct: 827 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 877



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/378 (17%), Positives = 157/378 (41%), Gaps = 6/378 (1%)

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
           T+ +  L+  YV+N + ++ L V   M +      + T + +++   ++   + A  LF 
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            +   G+ P V  Y  ++R   E + F  A  +   M+    + +V TYN  I+   K+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A  +   +  +G+  +  TY T++    K  + +    +  ++   G         
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            ++    + G +  A  L++++++    P+       I  + + G+++EA  +F      
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   +   +  +I+ F +  K    +    KM   G     +  + +++ + KL +   A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS-NINKKELHHVVAG 513
             L+ EM   G   +  ++  ++S Y    + +    L+  +     + N      +++G
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 514 IYERANRLNDASRIMNRM 531
           +   ANR+ +A+++   M
Sbjct: 505 LCH-ANRMAEANKLFGEM 521



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G   +  TY+ LI  F K G    A   L  M    +S D + YS +I    +  D  +A
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           I ++  + + G+ PD VAYN +I          +A  L ++M  +GVKP+  +Y++L++
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN+++R   +  + + A  +   M   GI+PD  +YST+I  + + G    AI   + M
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
               V+ D V Y+ LI       + +KA  +   +   G+ P+   YN++I+
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887


>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
 gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
          Length = 1365

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 209/445 (46%), Gaps = 5/445 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+     V  YN ++    R   W     L   M+ RG  PD  T++ +I    + GM +
Sbjct: 118 ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQE 177

Query: 72  S-AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S LQ +    +  D + Y+ LI      +  S AI IF  ++  G  PD+  YN M
Sbjct: 178 GLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAM 237

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+V+G+A   + A  +   M+EQG  PD V+Y+++L+ +  + +  E   +   M +  C
Sbjct: 238 ISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARC 297

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N MI +YG+  M + A+ L+  M++ G  P  V++  L+   G+A    EA  
Sbjct: 298 SSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 357

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M + ++   +  ++ MI  Y K+     A +    M   G+ P+ + YS ++ ++ 
Sbjct: 358 MFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFF 417

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KAG  ++  +L++ +  SG++ +  +Y  M+  + +   VA  + L  E+ Q ++     
Sbjct: 418 KAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQ-SSASLAA 476

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             + LA+ G   EA  V + +F  G    +     ++  F  + K ++  ++   + S  
Sbjct: 477 LSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIE 536

Query: 431 YFPDSHI---IALVLNSYGKLREFE 452
               +H+   +A++L   G+  E E
Sbjct: 537 PSVAAHLYKRLAVMLAKAGRFSEAE 561



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 199/438 (45%), Gaps = 11/438 (2%)

Query: 33   KQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLY 92
            K W+ A  +F +++Q G A +   YS L++ + + G F+ A   L  M    +  +    
Sbjct: 660  KLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCA 719

Query: 93   SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
            + ++E   +     +    F RL   GI P+   +  + + F +    +EAR +  +M+E
Sbjct: 720  NYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKE 779

Query: 153  QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
             G  P    +  LL LY      ++A  +  ++ +    LD+   N MI +Y +L   ++
Sbjct: 780  AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRN 839

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A  +F  M+++G  P   ++NTL+ +Y   ++  EA  L R M +     N+ TY T+I 
Sbjct: 840  AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 899

Query: 273  IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             YG+   +E A  + + +   G +P+A  Y+ +I ++ KAG+  +   + ++++  G E 
Sbjct: 900  AYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEP 959

Query: 333  DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI-TILARAGRIEEATWV 387
                   ++ +Y + G    A+ +L  L +    P+ I   + I + L     +    W+
Sbjct: 960  SLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWL 1019

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             R+  DA          C +   S  ++ ++ + + + +  AG+      + L L +   
Sbjct: 1020 -RKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKALSEAGFS-----LPLRLMTECT 1073

Query: 448  LREFETADDLYSEMQEEG 465
             +  +   D++ ++QE G
Sbjct: 1074 PKVVQDMQDIFDQLQESG 1091



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 162/327 (49%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            ++ +  AY+ +L        +E A    D M   G+ P+    + ++  FG+ G      
Sbjct: 677  FAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEIS 736

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + Q++ +  +S +   +  +     +  +  +A S++ ++K +G  P +  +  ++ ++
Sbjct: 737  EFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALY 796

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +  +  +A  L++++++ G++ D   Y+ +++LY +   +  A  VF  M E+ C  D 
Sbjct: 797  SRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDA 856

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            TT N +I +Y +  M ++A  L   M K G  P++ +Y TL+  YG  + + +A  +F+ 
Sbjct: 857  TTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKS 916

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +     + +   YN MI +Y K+ EH K   ++++M+  G EP+  T   ++  +GK G 
Sbjct: 917  IAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGA 976

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMI 341
              +A  + + L   G+  D + Y ++I
Sbjct: 977  TGKAEEVLETLPEIGMSPDAIHYTSII 1003



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 185/405 (45%), Gaps = 5/405 (1%)

Query: 37   LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
            +AH L  +        D   +  +I  +GK  ++ +A    + ++Q   +G+   YS L+
Sbjct: 629  VAHELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALL 688

Query: 97   ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                +  ++ +A      + ++G+ P+    N ++  FG+A   KE     + + E G+ 
Sbjct: 689  SAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGIS 748

Query: 157  PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
            P++ ++  + + +  N    EA S++ +M E      +     ++ +Y +  +  DA+ L
Sbjct: 749  PNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEEL 808

Query: 217  FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
               ++K G++  +  YN ++ +Y +   +  A  +F+ MQ      +  T+NT+I +Y +
Sbjct: 809  VKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSR 868

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            +   ++A  L++EM   G  PN  TY+T+I+ +G+    + A ++F+ +  +G + D   
Sbjct: 869  NQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATA 928

Query: 337  YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAF 392
            Y  MI  Y + G     + ++ +++     P  T I +L     + G   +A  V     
Sbjct: 929  YNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLP 988

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            + G   D   +  +I     NK Y + +    KM  A   P +H+
Sbjct: 989  EIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRP-THV 1032



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/589 (19%), Positives = 240/589 (40%), Gaps = 75/589 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P ++ YN ++    RA + E A  +F  M+++G  PD  TY++++  F ++G  +     
Sbjct: 229 PDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI 288

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M   R S D + Y+ +I +  K   + KA  ++ ++K  G  PD V +  +I+  GK
Sbjct: 289 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 348

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EA  + E+M +  V+P   ++S ++  Y +   F +A   ++ M       DL  
Sbjct: 349 AGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLA 408

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE----AEL-------- 244
            ++M+DV+ +  M +    L+ +M   G+ P +  Y  ++RV+ +    AE+        
Sbjct: 409 YSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMV 468

Query: 245 ------------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                             + EA  + ++   + +   V T N ++  +  S +   A +L
Sbjct: 469 QSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDL 528

Query: 287 MQEMQNRGIEPNAITY-------------------------------------STIIAIW 309
           +  + +  IEP+   +                                       ++A +
Sbjct: 529 VHAVSS--IEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASY 586

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            +AG  D A   F  + + G+E+D  + QT ++ Y R G    A  LL +      + ++
Sbjct: 587 DRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDV-KD 645

Query: 370 TA--ITILARAGRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           +A  + I+A  G++   + A  VFR     G   + S +  ++  ++    +       +
Sbjct: 646 SAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALD 705

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M +AG  P++     VL ++G+  + +   + +  + E G   + +    +   +    
Sbjct: 706 NMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNG 765

Query: 485 DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +     S++ ++         ++   +  +Y R     DA  ++  + K
Sbjct: 766 NLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKK 814



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 147/294 (50%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A   P+    N VL    RA + +     F  + + GI+P+  T+  +   F + G  + 
Sbjct: 710  AGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEE 769

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            A S  +QM++   S  + ++  L+ L  + +    A  +   +K +G+  D+  YN MI+
Sbjct: 770  ARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMIS 829

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            ++ K   ++ A L+ + M+E G  PD  +++TL+ LY  N    EA ++  EM +     
Sbjct: 830  LYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP 889

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            +++T   +I  YG+L   +DA+ +F S+ + G  P   +YN ++ VY +A    +   + 
Sbjct: 890  NISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEII 949

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
              M+    E ++ T + ++  YGK     KA  +++ +   G+ P+AI Y++II
Sbjct: 950  EQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSII 1003



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/387 (20%), Positives = 179/387 (46%), Gaps = 11/387 (2%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            SP+   + V+     R    E A  ++ +M++ G +P    +  L+  + +E +   A  
Sbjct: 748  SPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEE 807

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++ +++  +  D+ +Y+++I L  KL  Y  A  +F  ++  G  PD   +NT+I ++ 
Sbjct: 808  LVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYS 867

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            + ++ +EA+ L+ EM + G  P+  +Y+TL++ Y     + +A  VF  + E  C  D T
Sbjct: 868  RNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDAT 927

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              N+MI+VY +    +  + +   M+  G +PS+ + + L+  YG+    G+A  +   +
Sbjct: 928  AYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETL 987

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                +  + + Y ++I  +  + ++  A   +++M +  + P  +T +  +       + 
Sbjct: 988  PEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERS 1047

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
              A ML + L  +G  + P+   T         +V   + +  +L++      +  + +L
Sbjct: 1048 SHALMLLKALSEAGFSL-PLRLMTECTP----KVVQDMQDIFDQLQESGPEACQGVVNVL 1102

Query: 376  ARAGRIEEATWVFRQAFDAGEVKDISV 402
                   +  W FRQ   A  V  +++
Sbjct: 1103 M------DLLWAFRQCATAALVFAVAI 1123



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/541 (21%), Positives = 214/541 (39%), Gaps = 69/541 (12%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I +E  ++P    YN VL    R  + E    +   MR    + D  TY+T+I  +GK G
Sbjct: 256 IMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAG 315

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           M   A     QM+++    D V ++ LI+   K    ++A ++F  +  S + P L A++
Sbjct: 316 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 375

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MI  + KA +F +A      M   GV+PD ++YS +L+++ +     + + ++  M   
Sbjct: 376 AMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGS 435

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK-------------------------- 222
               +L+   IM+ V+ Q     + + L   M +                          
Sbjct: 436 GLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLK 495

Query: 223 ----MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                G+   V + N +L  +  +    +A  L   +   E       Y  +  +  K+ 
Sbjct: 496 ISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLAVMLAKAG 555

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A   M+  Q  G    +     ++A + +AG  D A   F  + + G+E+D  + Q
Sbjct: 556 RFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQ 615

Query: 339 TMIVAYERVG--LVAH---------------------------------AKRLLHELRQ- 362
           T ++ Y R G   VAH                                 A+ +  +L+Q 
Sbjct: 616 TAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQH 675

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
               NT      ++  A  G  E AT        AG   + +    ++E F R  K   +
Sbjct: 676 GFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEI 735

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E F+++   G  P+S    ++ +++ +    E A  +Y +M+E G   S QV   +L+L
Sbjct: 736 SEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLAL 795

Query: 480 Y 480
           Y
Sbjct: 796 Y 796



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/495 (18%), Positives = 209/495 (42%), Gaps = 18/495 (3%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           +G+A    T + ++  F   G    A   +  +     S    LY  L  +  K   +S+
Sbjct: 500 QGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLAVMLAKAGRFSE 559

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A       ++ G V        ++  + +A +  EA     +M  +G++ D     T + 
Sbjct: 560 AEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVM 619

Query: 168 LY-------VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y       V +   ++ L  F    +V    D      +I  YG+L + ++A+ +F  +
Sbjct: 620 CYCRKGFAFVAHELLIDCLHAF----DVK---DSAMHVAIIASYGKLKLWQNAEIVFRDL 672

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           ++ G   +  +Y+ LL  Y E   F  A      M    ++ N    N +++ +G++ + 
Sbjct: 673 QQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKA 732

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++ +   Q +   GI PN+ T+  I   + + G L+ A  ++++++ +G      +++ +
Sbjct: 733 KEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKAL 792

Query: 341 IVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y R  +   A+ L+ ++++     +       I++ ++ G    A  VF+   + G 
Sbjct: 793 LALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGC 852

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D + F  +I L+SRN+       +  +M   G  P+      ++++YG+L+ +E A+ 
Sbjct: 853 SPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAEL 912

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           ++  + E GC      +  M+++Y    +   +E + E++  D         H++   Y 
Sbjct: 913 VFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYG 972

Query: 517 RANRLNDASRIMNRM 531
           +      A  ++  +
Sbjct: 973 KGGATGKAEEVLETL 987



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 10/304 (3%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           +L V G A   G A  LF   +   I   V  YN+++ +Y +  +      L+  MQ+RG
Sbjct: 97  MLSVLGRANQPGLAQELFDRAE-SSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRG 155

Query: 295 IEPNAITYSTIIAIWGKAGKLDR-AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
             P+ +T++ +I    + G  +  A+ L Q + ++G+  D + Y T+I A      ++ A
Sbjct: 156 CRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDA 215

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             +  E+++    P+       I++  RAGR+E A+ +FR   + G   D   +  ++  
Sbjct: 216 ILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHA 275

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG-CVF 468
           F+R+ +   V  +   MR A    D      +++ YGK      A++LY +M+EEG C  
Sbjct: 276 FARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-- 333

Query: 469 SDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
            D V F +L    G     N   ++FE +         +    +   Y +A+   DA   
Sbjct: 334 PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHT 393

Query: 528 MNRM 531
            + M
Sbjct: 394 YSCM 397



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 4/190 (2%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E   SP    +N ++    R +  + A  L  EM + G AP+  TY+TLI+ +G+   +
Sbjct: 848  QEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAY 907

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A    + + +     D   Y+ +I + RK  ++ K   I  ++K  G  P L   + +
Sbjct: 908  EDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHML 967

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            ++ +GK     +A  ++E + E G+ PD + Y++++N ++ N  ++ A+    +M +  C
Sbjct: 968  MDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDA-C 1026

Query: 191  --PLDLT-TC 197
              P  +T TC
Sbjct: 1027 VRPTHVTITC 1036


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 213/445 (47%), Gaps = 6/445 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V + D + E+  +  +   Y +++  + +A++  LA  L ++M+      D +TY  +I
Sbjct: 96  AVQLFDEMTEKGLFGDAK-TYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMII 153

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K+GM   A+    +M    +  D+V+YS+L++   +     +A+  F  ++  GI 
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+  YN++I+   +A L+KE    +  M ++G  PD  +++ L++   +  K  EA  +
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M+      D+ T N +++    +   +DA +LF S+   GI  +V SYN L+  Y +
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            +   EA  LF  M+ K ++ + VTYNT+I    +S     A  L  EMQ  G      T
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y  ++    K G L+ A  LFQ ++ +  + +  ++  ++    R G +  A +   E+ 
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
               +P+TI     I  L   G + EA  +  Q  + G + D   F  +I+   +  +  
Sbjct: 454 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 513

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVL 442
             I++ E+MR+  + PD  + +++L
Sbjct: 514 EAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 208/452 (46%), Gaps = 5/452 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P       +++ V        A  LFDEM ++G+  D  TY  LI    K      AI
Sbjct: 73  FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAI 132

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M+ +   GD+  Y  +I+   K    ++A+ +FS +  +GI+PD+V Y+++++  
Sbjct: 133 KLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +    KEA    +EM  +G+  D  +Y++L++       + E       M +     D 
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I+ID   +     +A ++   M   G +P +++YNTL+          +A  LF  
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +  + I+ NV +YN +I  Y K  + ++A  L +EM+ +G++P+ +TY+T+I    ++G+
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +  A  LF ++++ G  +    Y  ++    + G +  A  L   +++    P     +I
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           L     RAG++EEA   F +    G   D   +  +I         +  +++  +M   G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             PDS    +++ +  K  E   A  L  EM+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 523



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 195/435 (44%), Gaps = 6/435 (1%)

Query: 47  QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS 106
           +RG  PD  T +TL+     E     A+    +M +  + GD   Y  LI    K     
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
            AI +  ++K +    D+  Y  +I+   K  +  EA  +  EM   G+ PD V YS+L+
Sbjct: 130 LAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           +      +  EAL  F EM       D+ T N +I    +  + K+       M   G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P   ++  L+    +    GEA  +  LM  K  E +++TYNT++       + E AT L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            + + +RGI+ N  +Y+ +I  + K  K+D A  LF+++R  G++   V Y T+I A  +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISV 402
            G V  A++L  E++      + +   +L     + G +EEA  +F+         +I V
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           F  +++   R  K     + F+++   G  PD+    +++N          A  L  +M+
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 463 EEGCVFSDQVHFQML 477
           E+GC+  D + F ++
Sbjct: 489 EKGCL-PDSITFNVI 502



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 183/422 (43%), Gaps = 46/422 (10%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  PD V   T++          +A  L +EM E+G+  D  +Y  L+N   +  K   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           + +  +M + NC  D+ T  ++ID   +  M  +A  +F  M   GI P VV Y++L+  
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
                   EA+  F+ M+ + I  +V TYN++I    ++   ++ T  +  M +RG  P+
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           A T++ +I    K GK+  A  + + +                                H
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMH-------------------------------H 279

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
           + ++P+ +   T +  L   G++E+AT +F    D G   ++  +  +I  + +++K   
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 339

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
              +FE+MR  G  P +     ++ +  +     TA  L+ EMQ  G        F  LS
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG-------QFLKLS 392

Query: 479 LY-----GARKDFNMLES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            Y     G  K+ ++ E+  LF+ +    +    E+  ++     RA +L +A +  + +
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452

Query: 532 NK 533
           +K
Sbjct: 453 SK 454



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 35/328 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  V+ YN ++  + RA  W+      + M  RG +PD +T++ LI    KEG    A  
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSK------------------------- 107
            L+ M       D++ Y+ L+    L  +L D +K                         
Sbjct: 273 ILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332

Query: 108 -------AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
                  A  +F  ++  G+ P  V YNT+I    ++   + A+ L  EM+  G      
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y  LL+   +N    EA+ +F  + +     ++   +I++D   +    ++A + F  +
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K G++P  ++YN L+       +  EA+ L   M+ K    + +T+N +I+   K  E 
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 512

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +A  L++EM+NR   P+    S ++ +
Sbjct: 513 HEAIQLLEEMRNRNFSPDEAVTSMLLCL 540



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   AYN+++  +        A  L  +M ++G  PD  T++ +I    KE     AI  
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKA-ISIFSRL-KSSGIVP 122
           L++M     S D  + S L+ LA     +  A +S+ + L K  G VP
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSVP 566


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 214/496 (43%), Gaps = 57/496 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI CF K G+   A 
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +WL +M +D     +V Y+ LI    K    S A  +F  + + G  P+++ Y  +I+ +
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 135 GKAKLFKEARLLIEEMREQG----------------VKPDTVSYSTLLNLYVENHKFVEA 178
            K+   ++A  +   MR                    KP+ V+Y  L++   + HK  +A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +     +A  +F  M + G +P+V +Y++L+ R
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDR 724

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L    + +   M       N+V Y  MI    K  + ++A  LM  M+ +G +P
Sbjct: 725 LFKDKRL-DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I  +GKAGK+D+   LF+++ S G   + V Y  +I      G +  A  LL
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 358 HELRQ-------------------------------------PNTIPRETAITILARAGR 380
            E++Q                                     P  +  +  I    +AGR
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGR 903

Query: 381 IEEATWVFRQAFDAGE--VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           +E A  + ++   A        +++  +I  FS   K  +  E+F  M   G  PD    
Sbjct: 904 LEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963

Query: 439 ALVLNSYGKLREFETA 454
             +L    ++R +E A
Sbjct: 964 VHLLMGLIRVRRWEEA 979



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 226/524 (43%), Gaps = 31/524 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQ------WELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           E+    P    YN+++ ++    +      +ELA   ++EM   G   ++    +   C 
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G F+ A   + +M  +    D   YS +I      S    A  +F  +K +G+VPD+
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             Y  +I+ F KA + K+A   ++EM   G +P  V+Y+TL++ Y++  K   A  +F  
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M    C  ++ T   +ID Y +    + A +++  MR     P V  Y            
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY------------ 632

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
                  F++      + NVVTY  ++    K+ + + A +L++ M   G EPN I Y  
Sbjct: 633 -------FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA-KRLLHEL 360
           +I  + KA KLD A  +F K+   G   +   Y ++I      +R+ LV     ++L   
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             PN +     I  L++  + +EA  +     + G   ++  +  MI+ F +  K    +
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           E+F +M S G  P+     +++N        + A  L  EM++    +   V      + 
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT--YWPKHVSSYCKVIE 863

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G +++F +   L E ++ + +     L+ V+   + +A RL  A
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVA 907



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 216/493 (43%), Gaps = 36/493 (7%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +D++N     S  P+V  Y ++L   L  KQ      +   M   G  P    +++L+  
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-------ELARKLSDYSKAISIFSRLK 116
           + K   F  A   L++ME+       V+Y+ LI       EL   ++ +  A   ++ + 
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVT-FELAEKAYNEML 446

Query: 117 SSGIV---PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           S+G V    ++V++   +  FGK   F++A  +I EM   G  PDT +YS ++       
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +   A  +F EM       D+ T  I+ID + +  + K A      M + G +P+VV+Y 
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-- 291
           TL+  Y +A+    A  LF LM  K    NV+TY  +I  Y KS   EKA  +   M+  
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 292 --------------NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                         N   +PN +TY  ++    KA K+  A  L + +   G E + ++Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  + +   +  A+ + H++ +    PN     + I  L +  R++    V  +  +
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +I ++  MI+  S+  K     ++   M   G  P+      +++ +GK  + + 
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDK 803

Query: 454 ADDLYSEMQEEGC 466
             +L+ EM  +GC
Sbjct: 804 CLELFREMGSKGC 816



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 196/475 (41%), Gaps = 39/475 (8%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   W +A      ++  G  P R TY+ L+  F +    D+A    ++M +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +S D        +   K+  + +A+S+   ++    VP+ + YN MI+   +A  F+E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+  +Y  LL   +   +      + + M    C    T  N ++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQRKEIE 261
            Y + D    A +L   M K    P  V YN L+  +    EL G     F L ++   E
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVT--FELAEKAYNE 444

Query: 262 Q----------NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                      NVV++   +  +GK    EKA  ++ EM   G  P+  TYS +I     
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIP 367
           A +++ A  LF++++ +GV  D   Y  +I  + + G++  A   L E+     +P  + 
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    +A ++  A  +F      G   ++  +  +I+ + ++       +++ +MR
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 428 SAGYFPDSHIIALVLN---------SYGKL-------REFETADDLYSEMQEEGC 466
                PD  +   + N         +YG L        + + A DL   M  +GC
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 218/515 (42%), Gaps = 28/515 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT-CFGKEGM 69
           E+  + P+   YN ++  +  A  +E A    + MR     P+  TY  L+  C  K+ +
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
                  L  M  +       ++++L+    K  D+S A  +  +++     P  V YN 
Sbjct: 360 -GRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 130 MI-NVFGKAKL-----FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +I ++    +L     F+ A     EM   G   + V+  +         KF +A  V  
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM       D +T + +I         ++A  LF  M+  G+ P V +Y  L+  + +A 
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           +  +A +    M R   E  VVTY T+I  Y K+ +   A  L + M  +G  PN ITY+
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYT 598

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSG--------------VEIDP--VLYQTMIVAYERV 347
            +I  + K+G +++A  ++ ++R                 V   P  V Y  ++    + 
Sbjct: 599 ALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKA 658

Query: 348 GLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
             V  A+ LL  +     +PNTI  +  I    +A +++EA  VF +  + G   ++  +
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTY 718

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   ++K+   V++V  KM      P+  I   +++   K+ + + A  L   M+E
Sbjct: 719 SSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           +GC  +   +  M+  +G     +    LF  + S
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 183/414 (44%), Gaps = 53/414 (12%)

Query: 7   DWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +W++E  R    P+V  Y  ++   L+AK+  +A+ LF+ M  +G  P+  TY+ LI  +
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDL----------------VLYSNLIELARKLSDYSKA 108
            K G  + A     +M  D    D+                V Y  L++   K      A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   +   G  P+ + Y+ +I+ F KA    EA+ +  +M E+G  P+  +YS+L++ 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDR 724

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +    L V ++M E +C  ++     MID   ++    +A +L   M + G  P+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI----------------- 271
           VV+Y  ++  +G+A    + + LFR M  K    N VTY  +I                 
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 272 -----------KIYGKSLEHEK-----ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                        Y K +E  K     +  L++E++  G  P  + Y  +I  + KAG+L
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRL 904

Query: 316 DRAAMLFQKLRSSGVEIDPV--LYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           + A  L +++ S+ + +     LY ++I ++     + HA  L +++ +   IP
Sbjct: 905 EVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIP 958


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 208/460 (45%), Gaps = 58/460 (12%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFD 71
           R  P VF+YN++L  +    + + A  L   M   G    PD  +YST+I  F KEG  D
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                  +M   R+S ++V Y+++I    K     KA+ + + +  SG++PD + YN+++
Sbjct: 106 -------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F  +   KEA + +++MR  GV+PD V+Y++L++   +N +  EA  +F         
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD-------- 210

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                      SM K G+ P + +Y TLL+ Y       E   L
Sbjct: 211 ---------------------------SMTKRGLKPDITTYGTLLQGYATKGALVEMHGL 243

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM R  I  N   ++ ++  Y K  + E+A  +  +M+ +G+ PNA+TY T+I +  K
Sbjct: 244 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCK 303

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIP 367
           +G+++ A + F+++   G+  D ++Y ++I +         A+ L  E+       +TI 
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I    + GR+ E+  +F      G   DI   G       RN +  ++   F    
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG-------RNDEAKDLFVAFS--- 413

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           S G  P+     L+  +       E  D L+  M++ GC 
Sbjct: 414 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 453



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 196/446 (43%), Gaps = 63/446 (14%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP+V  YN ++  + +A+  + A  +   M + G+ PD  TY++++  F   G   
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI +L++M  D V  D+V Y++L++   K    ++A  IF  +   G+ PD+  Y T++
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLL 228

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             +       E   L++ M   G+ P+   +S L+  Y +  K  EA+ VF++       
Sbjct: 229 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK------- 281

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                       MR+ G++P+ V+Y T++ V  ++    +A+  
Sbjct: 282 ----------------------------MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  + +  + + YN++I       + EKA  L  EM +RGI  + I +++II    K
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLY------QTMIVAYERVGLVAH------------A 353
            G++  +  LF  +   GV+ D +        + + VA+   GLV +             
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 433

Query: 354 KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE--LFS 411
           + LL EL Q      +   T+   +G +    ++ R+    GE+     +  MI+   FS
Sbjct: 434 QGLLEELDQLFLSMEDNGCTV--DSGML---NFIVRELLQRGEITRAGTYLSMIDEKHFS 488

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHI 437
                A+   +F  + S G + + HI
Sbjct: 489 LE---ASTASLFIDLLSGGKYQEYHI 511



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 171/338 (50%), Gaps = 20/338 (5%)

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCN 198
           ++AR + +E+  +G+ PD  SY+ LLN   + ++  EAL +   M +   +CP D+ + +
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 199 IMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            +I+ +   G LD           M    I P+VV+YN+++    +A+   +A+ +   M
Sbjct: 93  TVINGFFKEGDLD----------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  +  + +TYN+++  +  S + ++A   +++M++ G+EP+ +TY++++    K G+ 
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +F  +   G++ D   Y T++  Y   G +     LL  + +    P     +IL
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
               A+  ++EEA  VF +    G   +   +G +I++  ++ +  + +  FE+M   G 
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            PDS +   +++S     ++E A++L+ EM + G   S
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 14/343 (4%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNL 168
           +F  L   GI PD+ +YN ++N        +EA  L+  M + G    PD VSYST++N 
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           + +     + L      N V       T N +I    +      A  +  +M K G+ P 
Sbjct: 98  FFKEGDLDKMLDQRISPNVV-------TYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            ++YN+++  +  +    EAI   + M+   +E +VVTYN+++    K+    +A  +  
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M  RG++P+  TY T++  +   G L     L   +  +G+  +  ++  ++ AY +  
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            V  A  +  ++RQ    PN +   T I +L ++GR+E+A   F Q  D G   D  V+ 
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
            +I       K+    E+F +M   G    +     +++S+ K
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373


>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
          Length = 1025

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 180/336 (53%), Gaps = 6/336 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRY------TYSTLITCFGKEGMFDSAI 74
           A   +L+ + ++     A  LFD +R    + D Y      TY+T+I+  G +     A+
Sbjct: 156 ALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRAL 215

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M    +  ++  YS L+ +  K ++   A+ ++ ++ + G  P+LV YNT+I+V+
Sbjct: 216 ELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVY 275

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
           GK   ++EA  +++ +  QG+ P+  +Y+T++     + +  EAL ++  M         
Sbjct: 276 GKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTA 335

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           TT   +I  YG+      A ++F  M + G + +V++Y++L+    +A  +  A+ LFR 
Sbjct: 336 TTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFRE 395

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  +    NVVTYN++I    +  + EKA  + ++MQ+RG +P+A+T+  +IA + +AG 
Sbjct: 396 MHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGH 455

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
             RA   F+++++     D V+Y T++ A  + GLV
Sbjct: 456 WRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 162/328 (49%), Gaps = 37/328 (11%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + + Y TMI+  G  +  + A  L+ EMR +G++ +  +YS L+N+ ++ ++   AL V+
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL---RVY 239
            +M    C  +L T N +IDVYG+    ++A R+  ++ + GIDP + +YNT++    + 
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMS 313

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+A+   EA+ ++  M     +    TY  +I  YGK+ + ++A  + Q+M  RG E N 
Sbjct: 314 GQAQ---EALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNV 370

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ITYS++I+   KAG+ + A  LF+++ + G   + V Y ++I A                
Sbjct: 371 ITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAA---------------- 414

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
                           A+  + E+A  +F Q    G   D   FG +I  + R   +   
Sbjct: 415 ---------------CAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRA 459

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           +  FE+M++    PDS +   ++ +  K
Sbjct: 460 LTAFEQMKAHNCRPDSVVYNTIVGALWK 487



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 1/293 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +   Y  ++      +Q   A  L  EMR RGI  + +TYS L+    K    D A+   
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +QM  +  + +LV Y+ LI++  K   + +AI +   L+  GI P++  YNT+I     +
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMS 313

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA  + E M   G +P   +Y+ L++ Y +N +   AL +F +M    C  ++ T 
Sbjct: 314 GQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITY 373

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I    +    + A  LF  M   G  P+VV+YN+L+    +   + +A  +F  MQ 
Sbjct: 374 SSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQH 433

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIW 309
           +  + + VT+  +I  Y ++    +A    ++M+     P+++ Y+TI+ A+W
Sbjct: 434 RGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALW 486



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +LD +  +    P +  YN V+     + Q + A  +++ M   G  P   TY+ LI
Sbjct: 284 AIRVLDALERQG-IDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALI 342

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           + +GK G  D A+   Q M +     +++ YS+LI    K   +  A+ +F  + + G  
Sbjct: 343 SAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCR 402

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P++V YN++I    +   +++A+ + E+M+ +G KPD V++  L+  Y     +  AL+ 
Sbjct: 403 PNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTA 462

Query: 182 FAEMNEVNCPLDLTTCNIMIDV 203
           F +M   NC  D    N ++  
Sbjct: 463 FEQMKAHNCRPDSVVYNTIVGA 484



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 122/254 (48%), Gaps = 5/254 (1%)

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           + ++Y T++   G  +    A+ L   M+ + I+ NV TY+ ++ +  K  E + A ++ 
Sbjct: 194 NTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVY 253

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           ++M   G  PN +TY+T+I ++GK G  + A  +   L   G++ +   Y T+I+A    
Sbjct: 254 RQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMS 313

Query: 348 GLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A    +R+L    QP        I+   + G+++ A  +F+     G  +++  +
Sbjct: 314 GQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITY 373

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I    +  ++   +E+F +M + G  P+      ++ +  +  ++E A +++ +MQ 
Sbjct: 374 SSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQH 433

Query: 464 EGCVFSDQVHFQML 477
            GC   D V F  L
Sbjct: 434 RGCK-PDAVTFGGL 446



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 60/122 (49%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  Y+ ++    +A +WELA  LF EM   G  P+  TY++LI    +   ++ A    
Sbjct: 369 NVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMF 428

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +QM+      D V +  LI    +   + +A++ F ++K+    PD V YNT++    K 
Sbjct: 429 EQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKT 488

Query: 138 KL 139
            L
Sbjct: 489 GL 490


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 203/466 (43%), Gaps = 51/466 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 219 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 278

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M     S  +V Y+ LI    K     +A  IF R+  +G  P+ V Y  +++  
Sbjct: 279 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 338

Query: 135 GKA----KLFKEARLLIEEMRE------------QGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA    K F+    LI                   + P+ V+Y  L++   + HK   A
Sbjct: 339 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +      A  +F  M K G  PSV +Y +L+ R
Sbjct: 399 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 458

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M +     NVVTY  MI    +  E EKA  L+  M+ +G  P
Sbjct: 459 MFKDGRL-DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 517

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I   GKAGK+D +  LF ++   G   + V Y+ +I      GL+  A+ LL
Sbjct: 518 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 577

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
            E++Q                       W           K +  + C I+ FS  K + 
Sbjct: 578 GEMKQ---------------------TYW----------PKYLQGYRCAIQGFS--KSFI 604

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             + + E+M S G  P + +  ++++ + K    E A +L+ EM E
Sbjct: 605 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 203/455 (44%), Gaps = 31/455 (6%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M + G   DR+T         KEG +  A   L  +E++    D VL +++I    + S 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           + +A+S   R++ +  +P++V Y T+++ F K K     + +I  M  +G  P+   +++
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI-DVYGQ-----LDMAKDADRLFW 218
           L++ Y     +  A  +   M    CP      NI I  + GQ      D+   A++++ 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M       + V+     R       F +A  L + M RK    +  TY+ +I     + 
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
           + EKA  L QEM+  G+ P+  TY+ +I  + KAG +++A  LF+++RS G     V Y 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 339 TMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
            +I AY +   V  A  + H +     +PN +     +  L +AG I +A  V+ +    
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 395 GEVKD----------------ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
            +  D                +  +G +++   +  K  +  E+ + M S+G  P+  + 
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             +++ + K  + ++A +++ +M +  C +   VH
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTK--CGYLPSVH 450



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/522 (22%), Positives = 214/522 (40%), Gaps = 62/522 (11%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD I  E     +V   +++   ++ A  ++ A      MR     P+  TY TL++ F 
Sbjct: 30  LDMIEREDFKLDTVLCTHMI-SGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 88

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K+         +  M  +  + +  L+++L+       DY+ A  + +R+ + G  P  V
Sbjct: 89  KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 148

Query: 126 AYNTMI-NVFGKAKL----------------------------------------FKEAR 144
            YN  I ++ G+ KL                                        F +A 
Sbjct: 149 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 208

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            LI+EM  +G  PDT +YS ++       K  +A  +F EM  V    D+ T  I+ID +
Sbjct: 209 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 268

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +  + + A  LF  MR +G  P+VV+Y  L+  Y +A+   +A  +F  M       N 
Sbjct: 269 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEM----------------QNRGIEPNAITYSTIIAI 308
           VTY  ++    K+    KA  +  ++                    + PN +TY  ++  
Sbjct: 329 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 388

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
             KA K+D A  L   + SSG E + ++Y  +I  + + G +  A+ +  ++ +   +P 
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 448

Query: 369 ETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
               T L     + GR++ A  V  Q        ++  +  MI+   R  +    +++  
Sbjct: 449 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 508

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            M   G  P+      +++  GK  + + + DL+++M  +GC
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 203/441 (46%), Gaps = 29/441 (6%)

Query: 8   WINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           W+ EE R    SP+V  Y  ++   L+AKQ   A+ +F  M   G  P+  TY  L+   
Sbjct: 279 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 338

Query: 65  GKEGMF--------------DSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYSKA 108
            K G                DSA S      +DR  ++ ++V Y  L++   K      A
Sbjct: 339 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   + SSG  P+ + Y+ +I+ F KA     A+ +  +M + G  P   +Y++L++ 
Sbjct: 399 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 458

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +   A+ V ++M + +C  ++ T   MID   ++  ++ A +L   M + G  P+
Sbjct: 459 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 518

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+Y  L+   G+A     ++ LF  M RK    N VTY  +I     +   +KA  L+ 
Sbjct: 519 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLG 578

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG-VEIDPVLYQTMIVAYERV 347
           EM+          Y    AI G +     +  + +++ S G V I PV Y  +I  + + 
Sbjct: 579 EMKQTYWPKYLQGYRC--AIQGFSKSFIASLGILEEMESYGTVPIAPV-YGMLIDCFSKA 635

Query: 348 GLVAHAKRLLHELRQ-PNTIPRE-----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           G +  A  L  E+ + P+++  +     + I  L  A ++EEA  ++ +    G V ++S
Sbjct: 636 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 695

Query: 402 VFGCMIELFSRNKKYANVIEV 422
           VF C+I+     KK+   +++
Sbjct: 696 VFVCLIKGLVEVKKWDEALQL 716



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 11/290 (3%)

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           EA  F EA+     M+      NVVTY T++  + K  +      ++  M   G  PN  
Sbjct: 54  EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 113

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVG---LVAHAK 354
            +++++  +        A  L  ++ + G     V+Y   I      E++    L+  A+
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 173

Query: 355 RLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           ++  E+   N +  +  +   AR     G+ ++A  + ++    G V D S +  +I   
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
               K      +F++M+  G  PD +   ++++S+ K    E A  L+ EM+  GC  + 
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 471 QVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGIYERAN 519
             +  ++  Y   K       +F R+ D+    N      +V G+ +  N
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 233/514 (45%), Gaps = 15/514 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPSV  Y+V++ +  + +  +    L +EM  RG+ P+ Y+Y+  I   G+   FD A  
Sbjct: 210 SPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQ 269

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME      D+V ++ +I++       S A  +F ++K+S   PD V Y T+++  G
Sbjct: 270 ILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCG 329

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +   +    +   M   G   + VSY+ +++   +  +  EAL+VF EM E     +  
Sbjct: 330 DSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQY 389

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N +I  + + DM   A  LF  M   G  P+  ++   +  YG++    +AI  +  M
Sbjct: 390 SYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHM 449

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K I  +V   N ++    +S     A  +  E+++ G+ P+ ITY+ +I    KA K 
Sbjct: 450 KSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKA 509

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           D A   F  +  +G   D +   ++I    + G    A +L H+L+    +P      T 
Sbjct: 510 DEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTL 569

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           ++ L R G+++E   +  +   +    ++  +  +++  S+N +    I +   M   G 
Sbjct: 570 LSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGC 629

Query: 432 FPDSHIIALVLNSYGKLRE--FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
            PD      V+  YG ++E  FE A  ++ +M++   + +         L    K+  M 
Sbjct: 630 TPDLSSYNTVM--YGLIKEERFEEAFRMFCQMKK---ILAPDYATLCTILPSFVKNGLMK 684

Query: 490 ESLFER----LDSDSNINKKELHHVVAGIYERAN 519
           E+L       L +D N +K   H ++ GI  +A 
Sbjct: 685 EALHTVKEYILKADCNTDKSSFHSLMEGILNKAG 718



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 215/471 (45%), Gaps = 4/471 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   +  EA  S + + YN ++  ++++     A  ++  M + GI+P   TYS L
Sbjct: 160 RSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVL 219

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK+   D+ +  L +ME   V  ++  Y+  I +  + + + +A  I  +++ SG 
Sbjct: 220 MVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGC 279

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+V +  +I V   A    +A+ +  +M+    KPD V+Y TLL+   ++      + 
Sbjct: 280 KPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVME 339

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++  M       ++ +   ++D   Q+    +A  +F  M++ GI P   SYN+L+  + 
Sbjct: 340 IWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFL 399

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A++F  A+ LF  M       N  T+   I  YGKS +  KA    + M+++GI P+  
Sbjct: 400 KADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVA 459

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + +++   ++G+L  A  +F +L+  GV  D + Y  MI    +      A     ++
Sbjct: 460 AANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 519

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +   +P   A    I  L + G+  EA  +F Q  +         +  ++    R  K 
Sbjct: 520 VETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKV 579

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
             V+ + E+M  + + P+      VL+   K  E   A  +   M E+GC 
Sbjct: 580 KEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCT 630



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 189/418 (45%), Gaps = 15/418 (3%)

Query: 38  AHG-------LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           AHG       +FD M+++ +  +  T++T+ +  G +G   SA   L  M +  +S +  
Sbjct: 120 AHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGY 179

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
            Y+ LI    K    ++A+ ++  +   GI P +  Y+ ++  FGK +       L+ EM
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
             +GVKP+  SY+  + +  +  +F EA  +  +M +  C  D+ T  ++I V       
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRL 299

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
            DA  +FW M+     P  V+Y TLL   G++      + ++  M       N+V+Y  +
Sbjct: 300 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAV 359

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +    +    ++A  +  EM+ +GI P   +Y+++I+ + KA   DRA  LF  + + G 
Sbjct: 360 VDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 419

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATW 386
             +   +   I  Y + G    A +    ++    +P   A    ++ LAR+GR+  A  
Sbjct: 420 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKR 479

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           VF +  D G   D   +  MI+  S+  K    +  F  M   G  PD     L LNS
Sbjct: 480 VFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD----VLALNS 533



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 163/329 (49%)

Query: 25   VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
            ++R++ + K+   AH LF++ +  G++    +Y++LI     E + D A     +M++  
Sbjct: 744  LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 803

Query: 85   VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
               D   Y+ +++   K     + + + + +   G     V YNT+I+   K+K  ++A 
Sbjct: 804  CGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAI 863

Query: 145  LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             L   +  +G  P   +Y  LL+  ++  K V+A ++F EM E  C  + T  NI+++ +
Sbjct: 864  DLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGH 923

Query: 205  GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
                  ++  ++F  M + GI+P + SY  L+     A    + +  FR +    +E ++
Sbjct: 924  RIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDL 983

Query: 265  VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            + YN +I   GKS   E+A  L  EM+ +GI PN  TY+++I   GKAGK   AA ++++
Sbjct: 984  IIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEE 1043

Query: 325  LRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            L   G + +   Y  +I  Y   G   +A
Sbjct: 1044 LLIKGWKPNVFTYNALIRGYSVSGSTDNA 1072



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 201/428 (46%), Gaps = 6/428 (1%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E   +P + +YN V+  +++ +++E A  +F +M++  +APD  T  T++  F K G+  
Sbjct: 626  EKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMK 684

Query: 72   SAISWLQQ-MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  +++ + +   + D   + +L+E     +   K+I     + S GI+ +      +
Sbjct: 685  EALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPL 744

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I    K K   EA  L  + +  GV   T SY++L+   V+ +    A  +F EM  + C
Sbjct: 745  IRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGC 804

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              D  T N+++D  G+    ++  R+   M + G + + V+YNT++    +++   +AI 
Sbjct: 805  GPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAID 864

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            L+  +  +       TY  ++    K+ +   A NL  EM   G +PN   Y+ ++    
Sbjct: 865  LYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHR 924

Query: 311  KAGKLDRAAMLFQKLRSSGVEID----PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
             AG  +    +F+K+   G+  D     VL  T+  A      +++ ++LL    +P+ I
Sbjct: 925  IAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLI 984

Query: 367  PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                 I  L ++ RIEEA  +F +    G V ++  +  +I    +  K +   +++E++
Sbjct: 985  IYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEEL 1044

Query: 427  RSAGYFPD 434
               G+ P+
Sbjct: 1045 LIKGWKPN 1052



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/415 (19%), Positives = 177/415 (42%), Gaps = 45/415 (10%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++EL R          +F  ++   +  ++  + T+ +  G     + A + +  MRE G
Sbjct: 114 MLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAG 173

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  +  +Y+ L+   V++    EA+ V+  M E      + T ++++  +G+    +D D
Sbjct: 174 MSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGK---KRDVD 230

Query: 215 RLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            + W + +M   G+ P+V SY   +RV G+A  F EA  +   M+    + +VVT+  +I
Sbjct: 231 TVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVI 290

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYST-------------IIAIWG-------- 310
           ++   +     A ++  +M+    +P+ +TY T             ++ IW         
Sbjct: 291 QVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYN 350

Query: 311 --------------KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
                         + G+LD A  +F +++  G+  +   Y ++I  + +  +   A  L
Sbjct: 351 DNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALEL 410

Query: 357 LHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
            + +      PN       I    ++G+  +A   +      G V D++    ++   +R
Sbjct: 411 FNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLAR 470

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + +      VF +++  G  PD+    +++    K  + + A + +S+M E GCV
Sbjct: 471 SGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCV 525



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 136/312 (43%), Gaps = 25/312 (8%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            Y  +   YN ++  ++++K+ E A  L+  +   G +P   TY  L+    K G    A 
Sbjct: 839  YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAE 898

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +   +M +     +  +Y+ L+   R   +      IF ++   GI PD+ +Y  +I+  
Sbjct: 899  NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
              A    +      ++ E G++PD + Y+ L++   ++ +  EA+ +F EM +     +L
Sbjct: 959  CTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNL 1018

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR----------VYGEAEL 244
             T N +I   G+   A +A +++  +   G  P+V +YN L+R           Y   + 
Sbjct: 1019 YTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDC 1078

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
                + L   +    +++N++                 A  L  EM+ RG  P+  TY+ 
Sbjct: 1079 VAVGVSLKTALISGLVDENLINI---------------AEGLFAEMKRRGCGPDQFTYNL 1123

Query: 305  IIAIWGKAGKLD 316
            I+   GK+ +++
Sbjct: 1124 ILDAIGKSMRIE 1135



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 42/237 (17%)

Query: 7    DWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            +  NE   Y   P+   YN++L     A   E    +F++M ++GI PD  +Y+ LI   
Sbjct: 899  NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
               G  +  +S+ +Q+ +  +  DL++Y+ LI+   K     +A+ +F+ +K  GIVP+L
Sbjct: 959  CTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNL 1018

Query: 125  -----------------------------------VAYNTMINVFGKAKLFKEARLLIEE 149
                                                 YN +I  +  +     A    + 
Sbjct: 1019 YTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDC 1078

Query: 150  MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
            +   GV   T   S L++  + N    E L  FAEM    C  D  T N+++D  G+
Sbjct: 1079 V-AVGVSLKTALISGLVDENLIN--IAEGL--FAEMKRRGCGPDQFTYNLILDAIGK 1130



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 29/47 (61%)

Query: 37   LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
            +A GLF EM++RG  PD++TY+ ++   GK    +  +   +++ +D
Sbjct: 1101 IAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 208/452 (46%), Gaps = 14/452 (3%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N  L  ++RA Q   A  LF E R     P+ +TY +LI    K G  D A   L +M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +   + +++ +I    K   +  A+  F  +  +   PD++ +N +++   K+   +E
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 143 ARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           A  + E M       P+ V+Y+T++N   ++ K   A+ +   MNE  C  ++ T ++++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +   +         L   M + G  P V+ YNTLL    ++    EA+ L +LM R    
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
             VVTYN++++++ +S + ++A  L+Q M  RG  P+ I Y+T+IA   +  +LD A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLV------AHAKRLLHELRQ----PNTIPRETA 371
            +++ ++    D + Y T+I    +   V        A  +L  ++Q    PN       
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L RA + ++A  + R+  D+  V D+S F  +I    ++       ++F  M     
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            P+    A +++   K  E + A  ++  M E
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 204/441 (46%), Gaps = 19/441 (4%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I + ++  ++  P+V  Y  V+  + +  + + A  L D M + G  P+  TYS L+   
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  D   + LQ+M +     D+++Y+ L+    K     +A+ +   +  SG  P +
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN+++ +F ++K    A  LI+ M E+G  PD ++Y+T++     + +  +A ++  +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDAD-------RLFWSMRKMGIDPSVVSYNTLLR 237
           M    C  D+ T + +ID   + D   DAD        +   M++ G  P+  +Y  ++ 
Sbjct: 302 MVAARCVPDVITYSTIIDGLCK-DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
               A    +A+ L R M   E+  ++ +++ +I    KS + + A  +   M  R  +P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSS---GVEIDPVLYQTMIVAYERVGLVAHAK 354
           N + Y+ +I    K G++D+A  +F+ +  S   GV      Y +++     VG +  A 
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVAT----YNSVLDGLCGVGRIEEAV 476

Query: 355 RLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           R++  +      P   +    I  L R   +EEA  +F+     G   ++ V+  ++   
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536

Query: 411 SRNKKYANVIEVFEKMRSAGY 431
            + K+ ++   V  K+  AGY
Sbjct: 537 CKKKRLSDAHGVANKLIEAGY 557



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 34/174 (19%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P + ++++V+ ++ ++   + A+ +F  M +R   P+   Y+ LI    K G  D A+  
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 77  LQQMEQ-------------DRVSG---------------------DLVLYSNLIELARKL 102
            + M +             D + G                     D   Y  LI    ++
Sbjct: 445 FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           S   +A  +F  +++ G   ++  YN ++N   K K   +A  +  ++ E G K
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 5/377 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+VF YN+++  + +    E A GLF+EM+ RG+ PD  TY+++I  FGK G  D 
Sbjct: 89  AGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDD 148

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            + + ++M+      D++ Y+ LI    K     K +  F  +K +G+ P++V+Y+T+++
Sbjct: 149 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVD 208

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K  + ++A     +MR  G+ P+  +Y++L++ Y +     +A  +  EM +V    
Sbjct: 209 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEW 268

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   +ID     +   +   L   M ++ I  +VV++  L+    + +L  +AI  F
Sbjct: 269 NVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYF 328

Query: 253 -RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R+     ++ N   Y  MI    K  + E AT L ++M  +G+ P+   Y++++    K
Sbjct: 329 GRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFK 388

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET- 370
            G +  A  L  K+  +G+++D + Y +++        +  A+  L E+      P E  
Sbjct: 389 QGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 448

Query: 371 AITILARA---GRIEEA 384
            I++L +    G I EA
Sbjct: 449 CISVLKKHYELGCINEA 465



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 200/459 (43%), Gaps = 5/459 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    ++ +   ++     E A   F +M++  + P   + + L+  F K G  D    +
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + M        +  Y+ +I+   K  D   A  +F  +K  G++PD V YN+MI+ FGK
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +     EEM++   +PD ++Y+ L+N + +  K  + L  F EM       ++ +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + ++D + +  M + A + +  MR++G+ P+  +Y +L+  Y +     +A  L   M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +E NVVTY  +I          +  +L+ EM    I+   +T+  +I    K   + 
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 317 RAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           +A   F ++ +  G++ +  +Y  MI    +   V  A  L  ++ Q   +P  TA T L
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 376 A----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + G + EA  +  +  + G   D+  +  ++   S   +        E+M   G 
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            PD  +   VL  + +L     A +L S + +   + SD
Sbjct: 443 HPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTSD 481



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 1/341 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P   + N +L    +  + +     F +M   G  P  +TY+ +I C  KEG  ++A
Sbjct: 55  RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAA 114

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               ++M+   +  D V Y+++I+   K+      +  F  +K     PD++ YN +IN 
Sbjct: 115 RGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 174

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K     +      EM+  G+KP+ VSYSTL++ + +     +A+  + +M  V    +
Sbjct: 175 FCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 234

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T   +ID Y ++    DA RL   M ++G++ +VV+Y  L+      E   E +HL  
Sbjct: 235 EYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLD 294

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKA 312
            M   +I+  VVT+  +I    K+    KA +    + N  G++ NA  Y+ +I    K 
Sbjct: 295 EMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKG 354

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            +++ A  LF+++   G+  D   Y +++    + G V  A
Sbjct: 355 NQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEA 395



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 181/413 (43%), Gaps = 12/413 (2%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           GM + AI    +M++ RV       + L+    KL         F  +  +G  P +  Y
Sbjct: 39  GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTY 98

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N MI+   K    + AR L EEM+ +G+ PDTV+Y+++++ + +  +  + +  F EM +
Sbjct: 99  NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           + C  D+ T N +I+ + +          F  M++ G+ P+VVSY+TL+  + +  +  +
Sbjct: 159 MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQ 218

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           AI  +  M+R  +  N  TY ++I  Y K      A  L  EM   G+E N +TY+ +I 
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALID 278

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR-Q 362
                        L  ++    +++  V +  +I    +  LV+ A     R+ ++   Q
Sbjct: 279 GLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQ 338

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N       I  L +  ++E AT +F Q    G V D + +     L   N K  NV+E 
Sbjct: 339 ANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY---TSLMDGNFKQGNVLEA 395

Query: 423 F---EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
               +KM   G   D      ++       + + A     EM  EG +  D+V
Sbjct: 396 LALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG-IHPDEV 447



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 174/378 (46%), Gaps = 7/378 (1%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            VP    ++ + +V     + +EA     +M+   V P T S + LL+ + +  K     
Sbjct: 21  CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             F +M        + T NIMID   +    + A  LF  M+  G+ P  V+YN+++  +
Sbjct: 81  RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+     + +  F  M+    E +V+TYN +I  + K  +  K     +EM+  G++PN 
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ++YST++  + K G + +A   +  +R  G+  +   Y ++I AY ++G ++ A RL +E
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 360 LRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + Q     N +     I  L       E   +  +  +      +  F  +I+   +NK 
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKL 320

Query: 416 YANVIEVFEKMRSA-GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
            +  I+ F ++ +  G   ++ I   +++   K  + E A  L+ +M ++G V  D+  +
Sbjct: 321 VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLV-PDRTAY 379

Query: 475 QMLSLYGARKDFNMLESL 492
             L + G  K  N+LE+L
Sbjct: 380 TSL-MDGNFKQGNVLEAL 396


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 190/387 (49%), Gaps = 5/387 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D + +  R  PS+ + N +L N+++  +   A  ++++M   GI PD ++Y+ ++
Sbjct: 205 ALCVFDNMGKCGRV-PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMV 263

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + KEG  D A +++++ME+     ++V Y++LI+    L D   A  + + +   GI 
Sbjct: 264 NAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIP 323

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            +   Y  +I  + K    ++A  LI  M E+ +  D   Y  L++ Y    +  +AL +
Sbjct: 324 ENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRI 383

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
              M +V   ++   CN +I+ Y +L     A  +  SM+   + P    YNTLL  + +
Sbjct: 384 RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCK 443

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            E F +A  L   M  K +   VVTYNT++K        E A ++   M  RG+ PN +T
Sbjct: 444 QEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVT 503

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y T++  + K G  DRA M+++   S G      LY TMI  + ++  +  A+ +  +++
Sbjct: 504 YCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK 563

Query: 362 Q----PNTIPRETAITILARAGRIEEA 384
           +    P+ I   T I    + G + EA
Sbjct: 564 ELGFPPDEITYRTLIDGYCKVGNLVEA 590



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 229/508 (45%), Gaps = 39/508 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWE-----------------LAHGLFDE 44
           S+      +++ ++ P V +Y  ++  + RA+ ++                 +A  ++DE
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDE 174

Query: 45  M----RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL----VLYSNLI 96
           +    R+   +P    +  ++  F ++GM   A+     M +      L     L SNL+
Sbjct: 175 LVSVYREFSFSPT--VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +         KA+ ++ ++ + GI+PD+ +Y  M+N + K     EA   ++EM     +
Sbjct: 233 QNGEAF----KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE 288

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+ V+Y++L++ YV       A  V A M+E   P +  T  ++I  Y +    + A++L
Sbjct: 289 PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKL 348

Query: 217 FWSM--RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
              M  + + +D  V  Y  L+  Y  A    +A+ +   M +  ++ N V  N++I  Y
Sbjct: 349 IGCMMEKNLFVDEHV--YGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K     KA  ++  M++  ++P++  Y+T++  + K     +A  L  ++ + GV    
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T++     VG V HA  + + + +    PN +   T +    + G  + A  +++ 
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
           A   G  K I+++  MI  F + +K     E+F KM+  G+ PD      +++ Y K+  
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLS 478
              A  L    + +G   S +++  +++
Sbjct: 587 LVEALKLKDMSERDGISSSTEMYNSLIT 614



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 202/456 (44%), Gaps = 17/456 (3%)

Query: 23  NVVLRNVLRAKQWELAH-----GLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           N V+ N L     +L H      +   M+   + PD Y Y+TL+  F K+  F  A    
Sbjct: 395 NTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLC 454

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M    V+  +V Y+ L++    +     A+ I++ +   G+ P+ V Y T+++ F K 
Sbjct: 455 DEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKV 514

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             F  A ++ ++   +G       Y+T++  + +  K V+A  +F +M E+  P D  T 
Sbjct: 515 GTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITY 574

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +ID Y ++    +A +L     + GI  S   YN+L+     +E   +   L   M+ 
Sbjct: 575 RTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKN 634

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           +E+  NVVTY ++I  +      +KA N   +M ++GI PN I  S I++   + GK+D 
Sbjct: 635 RELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDE 694

Query: 318 AAMLFQKLRSSGVEIDPV--------LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           A ++  ++     +IDP+        L ++ +   E   +V    +    +   N I   
Sbjct: 695 ANLILHQI----ADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYN 750

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
            AIT L ++  I++   +       G   D   +  +I   S   K      + + M +A
Sbjct: 751 IAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINA 810

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G  P+  +   ++N   K    + A  L++++  +G
Sbjct: 811 GLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKG 846



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 107/504 (21%), Positives = 212/504 (42%), Gaps = 48/504 (9%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V++ DW        P  + YN +L    + + +  A  L DEM  +G+     TY+TL+ 
Sbjct: 420 VSMKDW-----NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLK 474

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
                G  + A+     M +  V+ + V Y  L++   K+  + +A+ I+    S G   
Sbjct: 475 NLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTK 534

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV- 181
            +  YNTMI  F K +   +A+ +  +M+E G  PD ++Y TL++ Y +    VEAL + 
Sbjct: 535 SITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLK 594

Query: 182 -FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
             +E + ++   ++   +++  V+   ++ K  + L   M+   + P+VV+Y +L+  + 
Sbjct: 595 DMSERDGISSSTEMYN-SLITGVFRSEELQK-LNGLLAEMKNRELSPNVVTYGSLIAGWC 652

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI---YGK--------------------- 276
           +  +  +A + +  M  K I  N++  + ++     +GK                     
Sbjct: 653 DKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHA 712

Query: 277 --------SLEHEKATNLMQEMQNRGIE---PNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
                    L H +   ++     + +     N I Y+  I    K+  +D    +   L
Sbjct: 713 HSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDL 772

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
              G   D   Y ++I A   VG V  A  L  ++      PN +     I  L ++G +
Sbjct: 773 LLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNL 832

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           + A  +F +    G    +  +  +I+ + +  +    +E+ +KMR  G  P S   + +
Sbjct: 833 DRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTL 892

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           ++      + E +  L +EM + G
Sbjct: 893 IHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 183/400 (45%), Gaps = 9/400 (2%)

Query: 4   AILDWINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           A++ W +  ++ ++ S+  YN ++    + ++   A  +F +M++ G  PD  TY TLI 
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            + K G    A+      E+D +S    +Y++LI    +  +  K   + + +K+  + P
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           ++V Y ++I  +    +  +A     +M ++G+ P+ +  S +++    + K  EA  + 
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 183 AEMNEVNCPLDLTTCNIMIDVYG--QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            ++ +++ P+     ++ +       L+  K  D        + I  ++V YN  +    
Sbjct: 700 HQIADID-PIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV-YNIAITGLC 757

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +++   +   +   +  K    +  TY ++I       +  +A  L  +M N G+ PN +
Sbjct: 758 KSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIV 817

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
            Y+ +I    K+G LDRA  LF KL   G+    V Y T+I  Y + G    A  L  ++
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           R+    P++I   T I  L   G+ E++  +  +   AG+
Sbjct: 878 REEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK 917


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/524 (22%), Positives = 240/524 (45%), Gaps = 4/524 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           ++  ++  YN++L  + R    +    ++ EM    + P+ +T +T++  + K G    A
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             ++ ++ Q  +S D   Y++LI    +  +   A +IF  + + G + + V+Y  +I+ 
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F +A+   EA  L  +M E    P   +Y+ ++    +  +  EAL++F EM E +C  +
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T  ++I    +     DA ++   M + G+ PSVV+YN L+  Y +  L   A+ +  
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           LM+      N  TYN +I  + +     KA +L+ +M  R ++PN +TY+ +I    K G
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
            L  A  L   +  SG+  D   Y   I    + GLV  A+ L   L++     N +   
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    + G++ +  ++  +   AG V +   +  +I+ + + K +     + + M   
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
              P +    +++++  K  EF+ A D++ +M   G      ++   +  Y +       
Sbjct: 584 DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643

Query: 490 ESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           E L  ++++   +    L+ +    Y R   ++ A  I+ RM++
Sbjct: 644 EVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 205/459 (44%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A  S   F Y  ++    R K  + A+ +F  M  +G   +  +Y+ LI  F +    D
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    QM +D     +  Y+ +I    +L   ++A+++F  +      P++  Y  +I
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +   F +A+ ++  M E+G+ P  V+Y+ L++ Y +      AL + + M   NC 
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T N +I  + +      A  L   M +  + P+VV+YN L+    +    G A  L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM    +  +  TY+  I    K    E+A +L + ++ +GI+ N + YST+I  + K
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            GK+     L  K+ S+G   + + Y ++I  Y +      A+ L+  + + +  P    
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            TIL     +    ++A  +F Q    G   D+ ++   I  +  + +  +   +  KM 
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + G  PD+ +  L +++YG+    + A  +   M E GC
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 205/457 (44%), Gaps = 8/457 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P+V  Y V++ ++     ++ A  + + M ++G+ P   TY+ LI  + K+G+  
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA+  L  ME +  S +   Y+ LI    +  +  KA+S+  ++    + P++V YN +I
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L+  M E G+ PD  +YS  ++   +     EA S+F  + E    
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +    + +ID Y ++    D   L   M   G  P+ ++YN+L+  Y + + F EA  L
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             +M +++IE    TY  +I    K  E ++A ++  +M + G  P+   Y+  I  +  
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G+L  A +L  K+ + G+  D +LY   I AY R G +  A  +L  + +    P    
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696

Query: 372 ITILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            + L +     + +E +     +  +  V       C      R   Y   +++F KM  
Sbjct: 697 YSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCW-----RRVDYEFTLDLFGKMAE 751

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  P+++     +    K+   E A  L+  M+E+G
Sbjct: 752 HGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 176/446 (39%), Gaps = 68/446 (15%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SP+   YN ++    R K    A  L  +M +R + P+  TY+ LI    KEG  
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK-------------- 116
            SA   L  M +  +  D   YS  I+   K     +A S+F  LK              
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 117 ---------------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                S+G VP+ + YN++I+ + K K FKEARLL++ M ++ +
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           +P   +Y+ L++  +++ +F +A  +F +M       D+      I  Y      KDA+ 
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M   GI P  + Y   +  YG       A  + + M     E +  TY+ +IK   
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS 705

Query: 276 KS-----------------------------LEHEKATNLMQEMQNRGIEPNAITYSTII 306
            +                             +++E   +L  +M   G  PNA TY   I
Sbjct: 706 NAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 765

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
               K G L+ A  LF  ++  G   +  +Y +++    ++GL   A R L  + +   +
Sbjct: 766 TGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHL 825

Query: 367 PRETAITILARA----GRIEEATWVF 388
           P   +  +L       G  E+A  VF
Sbjct: 826 PHLDSCKLLLCGLYDEGNDEKAKRVF 851


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 201/464 (43%), Gaps = 46/464 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F + ++LR + R+ Q E A  L   M++ G  PD   Y+ LI+ + K   F  A  +
Sbjct: 40  PDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 99

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M ++     +V Y+N+++   K      A+ +   ++  G  P++  YN ++    +
Sbjct: 100 LAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 159

Query: 137 AKLFKEARLLIEEMREQG--------------------------------VKPDTVSYST 164
            +   EA+ ++EEM  +G                                V PD VSY+T
Sbjct: 160 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTT 219

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           ++N   ++     A  +   M+   C  D+ T + +ID + +    + A  L  SM K+G
Sbjct: 220 VINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P++V+YN+LL         G+A  +   M+R+    +VV+YN  I    K+   +KA 
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339

Query: 285 NLMQEMQNRGIEPNAITYSTIIAI----------WGKAGKLDRAAMLFQKLRSSGV-EID 333
            +   M  RG  PNA +YS +I              K G+ D A  LF K+    + E D
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET---AITILARAGRIEEATWVFRQ 390
              Y  M+ ++ +   +  A ++  ++ + N     T    +  L    R+ +A  +   
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLT 459

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             D G + D   +G +++   +  K A  +E+FE+    G  PD
Sbjct: 460 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 503



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 216/468 (46%), Gaps = 53/468 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y  +VF YN +L  + R  + + A  +F EM  +   PD +T++ L+    +    + A 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +M++     D  +Y+ LI    K  D+ +A    + +  +  +P +V Y  +++  
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA+  ++A  L++EMR++G  P+  +Y+ ++    E  K  EA  +  EM         
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM--------- 173

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                                   ++R  G  P VV+YN+ ++   + +   EA    + 
Sbjct: 174 ------------------------AVR--GYFPDVVTYNSFIKGLCKCDRVDEA---RKF 204

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + R  +  +VV+Y T+I    KS + + A+ ++  M NRG  P+ +TYS++I  + K G+
Sbjct: 205 LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGE 264

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           ++RA  L   +   G   + V Y +++ A  R+G +  A+ +L E+ +    P+ +    
Sbjct: 265 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 324

Query: 371 AITILARAGRIEEATWVFRQAFDAGE----------VKDISVFGCMIELFSRNKKYANVI 420
            I  L +A R+++A  VF +  + G           + DI ++  +++   +  ++    
Sbjct: 325 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEAC 384

Query: 421 EVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            +F K+       PD     ++L+S+ K R+ + A  ++ +M E+ C 
Sbjct: 385 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 51/393 (12%)

Query: 1   RSVAILDWINEEARY------SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDR 54
           + +   D ++E  ++      +P V +Y  V+  + ++   + A  + D M  RG  PD 
Sbjct: 190 KGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
            TYS+LI  F K G  + A+  L  M +     ++V Y++L+    +L    KA  +   
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS----------T 164
           ++  G  PD+V+YN  I+   KA+  K+A+ + + M E+G  P+  SYS           
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           LL+   +  +F EA ++F+++      LD   C                           
Sbjct: 370 LLDGLCKGGRFDEACALFSKV------LDEKIC--------------------------- 396

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
            +P V  YN +L  + +     +A+ + + M  K    NVVT+N ++           A 
Sbjct: 397 -EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAE 454

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++  M + G  P+ +TY T++    K GK   A  LF++    G   D V Y  +I   
Sbjct: 455 TMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 514

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
               +   A  L  +L +   +P +  + +L R
Sbjct: 515 VHENMAEEAYLLFTKLVERRWVPDDKTLGLLHR 547



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 1/313 (0%)

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G + +  +Y+ LL      H+  +A +VF EM + +C  D  T  I++    + +  + A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            +L   M++MG  P    YN L+  Y +A+ FG+A      M +      VVTY  ++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             K+     A  L+ EM+++G  PN  TY+ I+    +  KLD A  + +++   G   D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAF 392
            V Y + I    +   V  A++ L  +   P+ +   T I  L ++G ++ A+ +     
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           + G   D+  +  +I+ F +  +    + + + M   G  P+      +L +  +L    
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301

Query: 453 TADDLYSEMQEEG 465
            A+D+  EM+  G
Sbjct: 302 KAEDMLVEMERRG 314



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 2/164 (1%)

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L R  R ++A+ VF++  D     D   F  ++    R+ +     ++  +M+  G  PD
Sbjct: 17  LTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPD 76

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLF 493
             I   +++ Y K ++F  A    +EM +  C+ +   +  ++  L  A +  + ++ L 
Sbjct: 77  DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLD 136

Query: 494 ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
           E  D   + N    + +V G+ E   +L++A +++  M  R  F
Sbjct: 137 EMRDKGCSPNIYTYNVIVEGLCEE-RKLDEAKKMLEEMAVRGYF 179


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 188/400 (47%), Gaps = 5/400 (1%)

Query: 14  RYS-PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           RY  P VFAYN ++   ++A Q E A+ + D M+ RG  PD  TY+ +I  F   G  D 
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+   +++ +D     ++ Y+ LIE          A+ +   + S G+ PD + YN +I 
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K  +  +A  L+  +  +G KPD ++Y+ LL   +   K+ E   + +EM  + C  
Sbjct: 252 GMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKP 311

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T +I+I    +    ++A  L  SM++ G+ P    Y+ L+  +        A    
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M       ++V YNT++    ++ + ++A  + +++   G  PN  +Y+T+ +    +
Sbjct: 372 EYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
           G   RA  +  KL + G++ D + Y ++I    R G+V  A  LL +++    +PN +  
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
              +  L +  R  +A  V     + G   + + +  +IE
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/471 (23%), Positives = 196/471 (41%), Gaps = 40/471 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y+P V     +++    ++    A  + + + + G  PD + Y+ LI+ F K        
Sbjct: 100 YTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIK-------- 150

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                             +N +E A ++ D         R+KS G +PD+V YN MI  F
Sbjct: 151 ------------------ANQLENANRVLD---------RMKSRGFLPDVVTYNIMIGSF 183

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                   A  + EE+ +   +P  ++Y+ L+   + +     A+ +  EM       D 
Sbjct: 184 CSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDT 243

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I    +  M   A  L  S+   G  P +++YN LLR       + E   L   
Sbjct: 244 LTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISE 303

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M     + NVVT++ +I    +  + E+A NL++ M+ +G++P+A  Y  +IA + + G+
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           LD A    + + S G   D V Y T++    R G    A  +  +L +    PN     T
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             + L  +G    A  +  +  + G   D   +  +I    R+      IE+   M+S  
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           Y P+     ++L    K+     A ++ + M E+GC  ++  +  ++   G
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIG 534



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 158/354 (44%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +     ++A  L DEM  +G+ PD  TY+ +I    KE M D A   
Sbjct: 206 PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFEL 265

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ +       D++ Y+ L+        +S+   + S + S G  P++V ++ +I    +
Sbjct: 266 LRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCR 325

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L+  M+E+G+KPD   Y  L+  +    +   A      M    C  D+  
Sbjct: 326 DGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVN 385

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  + ++G  P+V SYNTL      +     A+ +   + 
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL 445

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + I+ + +TYN++I    +    ++A  L+ +MQ+    PN ++Y+ I+    K  + +
Sbjct: 446 NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAN 505

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            A  +   +   G + +   Y  +I      GL A A  L + L   N I  ++
Sbjct: 506 DAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 155/341 (45%), Gaps = 5/341 (1%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++N   +A  + E+   +E M ++G  PD +  + L+  +  +    +A  V   +    
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
            P D+   N +I  + + +  ++A+R+   M+  G  P VV+YN ++  +        A+
Sbjct: 135 KP-DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  + +   E  V+TY  +I+        + A  L+ EM ++G+EP+ +TY+ II   
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K   +D+A  L + L S G + D + Y  ++      G  +  ++L+ E+     +PN 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I  L R G++EEA  + R   + G   D   +  +I  F R  +     E  E 
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           M S G  PD      ++    +  + + A +++ ++ E GC
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC 414



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 21/309 (6%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           LL     A  + E+++    M  K    +V+    +IK +  S    KAT +M+ ++  G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
            +P+   Y+ +I+ + KA +L+ A  +  +++S G   D V Y  MI ++   G +  A 
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 355 RLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            +  EL + N  P     TIL  A    G I+ A  +  +    G   D   +  +I   
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 411 SRNKKYANVIEVFEKMRSAGYFPD---SHIIALVLNSYGKLREFETADDLYSEMQEEGC- 466
            +        E+   + S G  PD    +I+   L S GK  E E    L SEM   GC 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEK---LISEMISIGCK 310

Query: 467 --VFSDQVHFQMLSLYGARKD-FNMLESLFER-LDSDSNINKKELHHVVAGIYERANRLN 522
             V +  +    L   G  ++  N+L S+ E+ L  D+         ++AG + R  RL+
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC----YDPLIAG-FCREGRLD 365

Query: 523 DASRIMNRM 531
            A+  +  M
Sbjct: 366 LATEFLEYM 374


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 16/470 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   ++ ++++     + + A   F  M+++G+ P   T ++L++ F K    ++A    
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M + R+   +  ++ +I +  K     KA      +++SG+ P++V YNT+++ +  +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + A  ++  M+ Q ++PD+ +Y +L++   +  +  EA  +F EM +          
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 198 NIMIDVY---GQLDMA---KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           N +ID +   G LDMA   KD       M K GI P++ +YN+L+      +   EA  +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKD------EMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + +Q K I  + +TYN +I  Y +    +KA  L  EM   GI+P   TY++++ +  K
Sbjct: 384 IKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             ++  A  LF+K+ S GV  D +++  +I  +     V  A  LL ++ +    P E  
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              +     R G++EEA  +F +    G   D   F  +I  +SR     +   V  +M 
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             G+ P       ++    K +E + A++L  EM  +G    D  +F ++
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 172/346 (49%), Gaps = 1/346 (0%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           AIL  +  + +  P  F Y  ++  + +  + E A  +F+EM Q+G+ P    Y+TLI  
Sbjct: 277 AILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F  +G  D A ++  +M +  +S  +  Y++LI          +A  +   ++  GI PD
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
            + YN +IN + +    K+A LL +EM   G+KP   +Y++LL++  + ++  EA  +F 
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           ++       D    N +ID +      K A  L   M +M + P  V++NT+++ +    
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  LF  M+R+ I+ + +++NT+I  Y +  + + A  +  EM + G  P  +TY+
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            ++    K  + D A  L +++ S G+  D   Y T+I    +V +
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 187/399 (46%), Gaps = 4/399 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R   SV+ +N+++  + +  + + A      M   G+ P+  TY+T++  +   G  ++A
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M++ ++  D   Y +LI    K     +A  IF  +   G+ P  V YNT+I+ 
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F        A    +EM ++G+ P   +Y++L++      +  EA  +  E+ E     D
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T NI+I+ Y +   AK A  L   M   GI P+  +Y +LL V  +     EA  LF+
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  + +  + + +N +I  +  +   + A  L+++M    + P+ +T++TI+    + G
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K++ A  LF +++  G++ D + + T+I  Y R G +  A R+ +E+      P  +   
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             +  L +    + A  + ++    G   D + +  +IE
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 173/361 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P++  YN ++     + + E A  +   M+++ I PD +TY +LI+   K+G  
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M Q  +    V+Y+ LI+      +   A +    +   GI P +  YN++
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+     +   EA  +I+E++E+G+ PD ++Y+ L+N Y       +A  +  EM     
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T   ++ V  + +  K+AD LF  +   G+ P  + +N L+  +        A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFE 487

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M R ++  + VT+NT+++ + +  + E+A  L  EM+ RGI+P+ I+++T+I+ + 
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G +  A  +  ++  +G     + Y  ++    +      A+ LL E+      P +T
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDT 607

Query: 371 A 371
            
Sbjct: 608 T 608



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 193/422 (45%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++   N +L   L+  + E A  L+ EM +  I    YT++ +I    KEG    A  +
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  ME   V  ++V Y+ ++           A +I + +K   I PD   Y ++I+   K
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  + EEM ++G++P  V Y+TL++ +        A +   EM +      ++T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I          +A+ +   +++ GI P  ++YN L+  Y       +A  L   M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+    TY +++ +  K    ++A +L +++ + G+ P+AI ++ +I        + 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + +    V  D V + T++  + R G V  A+ L  E++    +P+ I   T I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +  +R G I++A  V  +  D G    +  +  +++   +N++     E+ ++M S G  
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 433 PD 434
           PD
Sbjct: 604 PD 605



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 183/404 (45%), Gaps = 12/404 (2%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           +++  LI+    ++   +A   F  +K  G++P +   N+++++F K    + A +L  E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M    +K    +++ ++N+  +  K  +A      M       ++ T N ++  Y     
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + AD +  +M++  I+P   +Y +L+    +     EA  +F  M +K +  + V YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  +      + A+    EM  +GI P   TY+++I       + D A  + ++++  G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKR--LLH-ELRQPNTIPRETAIT----ILARAGRIE 382
           +  D + Y  +I  Y R    A+AK+  LLH E+      P +   T    +L++  R++
Sbjct: 392 ISPDAITYNILINGYCR---CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F++    G + D  +F  +I+    N       E+ + M      PD      ++
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
             + +  + E A +L+ EM+  G +  D + F  ++S Y  R D
Sbjct: 509 QGHCREGKVEEARELFDEMKRRG-IKPDHISFNTLISGYSRRGD 551



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++P+V  YN +++ + + ++ +LA  L  EM  +G+ PD  TY TLI    K  + D
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 214/496 (43%), Gaps = 57/496 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI CF K G+   A 
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +WL +M +D     +V Y+ LI    K    S A  +F  + + G  P+++ Y  +I+ +
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 135 GKAKLFKEARLLIEEMREQG----------------VKPDTVSYSTLLNLYVENHKFVEA 178
            K+   ++A  +   MR                    KP+ V+Y  L++   + HK  +A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +     +A  +F  M + G +P+V +Y++L+ R
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDR 724

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L    + +   M       N+V Y  MI    K  + ++A  LM  M+ +G +P
Sbjct: 725 LFKDKRL-DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I  +GKAGK+D+   LF+++ S G   + V Y  +I      G +  A  LL
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 358 HELRQ-------------------------------------PNTIPRETAITILARAGR 380
            E++Q                                     P  +  +  I    +AGR
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGR 903

Query: 381 IEEATWVFRQAFDAGE--VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           +E A  + ++   A        +++  +I  FS   K  +  E+F  M   G  PD    
Sbjct: 904 LEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963

Query: 439 ALVLNSYGKLREFETA 454
             +L    ++R +E A
Sbjct: 964 VHLLMGLIRVRRWEEA 979



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 226/524 (43%), Gaps = 31/524 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQ------WELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           E+    P    YN+++ ++    +      +ELA   ++EM   G   ++    +   C 
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
              G F+ A   + +M  +    D   YS +I      S    A  +F  +K +G+VPD+
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
             Y  +I+ F KA + K+A   ++EM   G +P  V+Y+TL++ Y++  K   A  +F  
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M    C  ++ T   +ID Y +    + A +++  MR     P V  Y            
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY------------ 632

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
                  F++      + NVVTY  ++    K+ + + A +L++ M   G EPN I Y  
Sbjct: 633 -------FKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA-KRLLHEL 360
           +I  + KA KLD A  +F K+   G   +   Y ++I      +R+ LV     ++L   
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             PN +     I  L++  + +EA  +     + G   ++  +  MI+ F +  K    +
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           E+F +M S G  P+     +++N        + A  L  EM++    +   V      + 
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT--YWPKHVSSYCKVIE 863

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           G +++F +   L E ++ + +     L+ V+   + +A RL  A
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVA 907



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 216/493 (43%), Gaps = 36/493 (7%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +D++N     S  P+V  Y ++L   L  KQ      +   M   G  P    +++L+  
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-------ELARKLSDYSKAISIFSRLK 116
           + K   F  A   L++ME+       V+Y+ LI       EL   ++ +  A   ++ + 
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVT-FELAEKAYNEML 446

Query: 117 SSGIV---PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
           S+G V    ++V++   +  FGK   F++A  +I EM   G  PDT +YS ++       
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +   A  +F EM       D+ T  I+ID + +  + K A      M + G +P+VV+Y 
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-- 291
           TL+  Y +A+    A  LF LM  K    NV+TY  +I  Y KS   EKA  +   M+  
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 292 --------------NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
                         N   +PN +TY  ++    KA K+  A  L + +   G E + ++Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFD 393
             +I  + +   +  A+ + H++ +    PN     + I  L +  R++    V  +  +
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                +I ++  MI+  S+  K     ++   M   G  P+      +++ +GK  + + 
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDK 803

Query: 454 ADDLYSEMQEEGC 466
             +L+ EM  +GC
Sbjct: 804 CLELFREMGSKGC 816



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 218/515 (42%), Gaps = 28/515 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT-CFGKEGM 69
           E+  + P+   YN ++  +  A  +E A    + MR     P+  TY  L+  C  K+ +
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
                  L  M  +       ++++L+    K  D+S A  +  +++     P  V YN 
Sbjct: 360 -GRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 130 MI-NVFGKAKL-----FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +I ++    +L     F+ A     EM   G   + V+  +         KF +A  V  
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM       D +T + +I         ++A  LF  M+  G+ P V +Y  L+  + +A 
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           +  +A +    M R   E  VVTY T+I  Y K+ +   A  L + M  +G  PN ITY+
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYT 598

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSG--------------VEIDP--VLYQTMIVAYERV 347
            +I  + K+G +++A  ++ ++R                 V   P  V Y  ++    + 
Sbjct: 599 ALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKA 658

Query: 348 GLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
             V  A+ LL  +     +PNTI  +  I    +A +++EA  VF +  + G   ++  +
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTY 718

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   ++K+   V++V  KM      P+  I   +++   K+ + + A  L   M+E
Sbjct: 719 SSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           +GC  +   +  M+  +G     +    LF  + S
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 196/475 (41%), Gaps = 39/475 (8%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   W +A      ++  G  P R TY+ L+  F +    D+A    ++M +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +S D        +   K+  + +A+S+   ++    VP+ + YN MI+   +A  F+E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+  +Y  LL   +   +      + + M    C    T  N ++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQRKEIE 261
            Y + D    A +L   M K    P  V YN L+  +    EL G     F L ++   E
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVT--FELAEKAYNE 444

Query: 262 Q----------NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                      NVV++   +  +GK    EKA  ++ EM   G  P+  TYS +I     
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIP 367
           A +++ A  LF++++ +GV  D   Y  +I  + + G++  A   L E+     +P  + 
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVT 561

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I    +A ++  A  +F      G   ++  +  +I+ + ++       +++ +MR
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 428 SAGYFPDSHIIALVLN---------SYGKL-------REFETADDLYSEMQEEGC 466
                PD  +   + N         +YG L        + + A DL   M  +GC
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 182/414 (43%), Gaps = 53/414 (12%)

Query: 7   DWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +W++E  R    P+V  Y  ++   L+AK+  +A+ LF+ M  +G  P+  TY+ LI  +
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDL----------------VLYSNLIELARKLSDYSKA 108
            K G  + A     +M  D    D+                V Y  L++   K      A
Sbjct: 605 CKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   +   G  P+ + Y+ +I+ F KA    EA+ +  +M E G  P+  +YS+L++ 
Sbjct: 665 RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDR 724

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +    L V ++M E +C  ++     MID   ++    +A +L   M + G  P+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI----------------- 271
           VV+Y  ++  +G+A    + + LFR M  K    N VTY  +I                 
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 272 -----------KIYGKSLEHEK-----ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                        Y K +E  K     +  L++E++  G  P  + Y  +I  + KAG+L
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRL 904

Query: 316 DRAAMLFQKLRSSGVEIDPV--LYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           + A  L +++ S+ + +     LY ++I ++     + HA  L +++ +   IP
Sbjct: 905 EVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIP 958


>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
 gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
 gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
 gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
 gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
          Length = 511

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 182/376 (48%), Gaps = 34/376 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + D + ++  Y P V  Y  ++  + + KQ E AH LF  M   G AP+  +Y+ L+
Sbjct: 143 ALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALV 202

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           + + + G FD A S L+QM+                                   + G  
Sbjct: 203 SAYSRSGRFDRAFSLLEQMKA----------------------------------TPGCR 228

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+  Y+ +I     A  F+  + L+E+M   G++P+ V+Y+TL++ Y +  +F E  S 
Sbjct: 229 PDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMEST 288

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM   NC  D+ T N  +  +G     +  +  +   +  GI P++ +YN LL  YG+
Sbjct: 289 LLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGK 348

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A+++ +   +   MQ+      +VTYN +I  +G++ + E+   + + M++  I+PN +T
Sbjct: 349 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 408

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
             +++  +G+AG + +   + + + +S + +D V +  ++ A+ RVG +A    +L  ++
Sbjct: 409 LCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMK 468

Query: 362 QPNTIPRETAITILAR 377
                P +   T + +
Sbjct: 469 LQRCKPDKVTCTTMIK 484



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 11/321 (3%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P +  Y  +I + GK K  + A  L + M ++G  P+  SY+ L++ Y  + +F  A S+
Sbjct: 158 PYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSL 217

Query: 182 FAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLR 237
             +M     C  D+ T +I+I        A D +R+ + M  M   GI P+VV+YNTL+ 
Sbjct: 218 LEQMKATPGCRPDVQTYSILIK---SCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLID 274

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            YG+A  F E       M  +  + +V T N+ ++ +G S + E   +  ++ Q  GI P
Sbjct: 275 AYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISP 334

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK--- 354
           N  TY+ ++  +GKA   ++   + + ++        V Y  +I A+ R G +   +   
Sbjct: 335 NIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIF 394

Query: 355 RLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           RL+   R +PN +   + +    RAG +++   V R   ++    DI  F C+++ F R 
Sbjct: 395 RLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRV 454

Query: 414 KKYANVIEVFEKMRSAGYFPD 434
              A + +V + M+     PD
Sbjct: 455 GCLAEMWDVLDIMKLQRCKPD 475



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 144/306 (47%), Gaps = 35/306 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+ ++L+ +       P V  Y++++++ L A  +E    L ++M + GI P+  TY+TL
Sbjct: 213 RAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTL 272

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +GK G F    S L +M  +    D+   ++ +             S + + ++SGI
Sbjct: 273 IDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGI 332

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P++  YN +++ +GKAK++++   ++E M++       V+Y                  
Sbjct: 333 SPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY------------------ 374

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                            N++ID +G+    +  + +F  M+   I P+ V+  +L+R YG
Sbjct: 375 -----------------NVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYG 417

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            A    +   + R+++  +I  ++V +N ++  +G+     +  +++  M+ +  +P+ +
Sbjct: 418 RAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKV 477

Query: 301 TYSTII 306
           T +T+I
Sbjct: 478 TCTTMI 483



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 6/261 (2%)

Query: 245 FGEAIHLFRLMQRKEIEQNVV-TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           +  A+ +F LM+ +   +  V  Y  +I + GK  + E+A  L Q M + G  PN  +Y+
Sbjct: 140 WDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYT 199

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            +++ + ++G+ DRA  L ++++++ G   D   Y  +I +          K L+ ++ +
Sbjct: 200 ALVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMAR 259

Query: 363 ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
               PN +   T I    +AGR  E      +        D+      +  F  + +   
Sbjct: 260 AGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIET 319

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           +   +EK +++G  P+     ++L+SYGK + +E    +   MQ+    ++   +  ++ 
Sbjct: 320 MESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVID 379

Query: 479 LYGARKDFNMLESLFERLDSD 499
            +G   D   +E +F  + S+
Sbjct: 380 AFGRAGDLEQMEYIFRLMKSE 400



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 5/253 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I + G+    + A  LF +M   G  P++ SY  L+  Y  +  F  A  L   M+   
Sbjct: 166 LITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMKATP 225

Query: 260 -IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               +V TY+ +IK    + + E+   LM++M   GI PN +TY+T+I  +GKAG+    
Sbjct: 226 GCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEM 285

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL--- 375
                ++ +   + D     + + A+   G +   +    + +     P      IL   
Sbjct: 286 ESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYNILLDS 345

Query: 376 -ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +A   E+   V            I  +  +I+ F R      +  +F  M+S    P+
Sbjct: 346 YGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPN 405

Query: 435 SHIIALVLNSYGK 447
              +  ++ +YG+
Sbjct: 406 CVTLCSLVRAYGR 418


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 215/470 (45%), Gaps = 4/470 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           RS  +   +  EA  S + + YN ++  ++++     A  ++  M + GI+P   TYS L
Sbjct: 153 RSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVL 212

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  FGK+   D+ +  L +ME   V  ++  Y+  I +  + + + +A  I  +++ SG 
Sbjct: 213 MVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGC 272

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+V +  +I V   A    +A+ +  +M+    KPD V+Y TLL+   ++      + 
Sbjct: 273 KPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVE 332

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V+  M       ++ +   ++D   Q+    +A  +F  M++ G+ P   SYN+L+  + 
Sbjct: 333 VWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFL 392

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +A++F  A+ LF  M       N  T+   I  YGKS +  KA    + M+++GI P+  
Sbjct: 393 KADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVA 452

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
             + ++     +G+L  A  +F +L++ GV  D + Y  MI    +      A     ++
Sbjct: 453 AANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 512

Query: 361 RQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +   +P   A    I  L + G+  EA  +F +  +         +  ++    R  K 
Sbjct: 513 VESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKV 572

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             V+++ E+M    Y P+      VL+   K  E   A D+   M E+GC
Sbjct: 573 KEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGC 622



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 212/454 (46%), Gaps = 8/454 (1%)

Query: 1   RSVAILDWI-NE-EAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           R V  + W+ NE EAR   P+V++Y + +R + +A +++ A+ +  +M   G  PD  T+
Sbjct: 220 RDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTH 279

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I      G    A +   +M+      D V Y  L++      D    + +++ + +
Sbjct: 280 TVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVA 339

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
            G   ++V+Y  +++   +     EA  + +EM+E+G+ P+  SY++L++ +++   F  
Sbjct: 340 DGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDR 399

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           AL +F  MN      +  T  + I+ YG+   +  A + +  M+  GI P V + N +L 
Sbjct: 400 ALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLY 459

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
               +   G A  +F  ++   +  + +TY  MIK   K+ + ++A N   +M   G  P
Sbjct: 460 SLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVP 519

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           + +  +++I    K GK + A  LF KL+   +E     Y T++    R G V    +LL
Sbjct: 520 DVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLL 579

Query: 358 HELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+ +    PN I   T +  L++ G +  A  +     + G   D+S +  ++    + 
Sbjct: 580 EEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKE 639

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           ++      +F +M+     PD   +  +L S+ K
Sbjct: 640 ERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVK 672



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 226/496 (45%), Gaps = 41/496 (8%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E+   P V A N ++  + +  +   A  LF ++++  I P   TY+TL++  G+EG   
Sbjct: 514  ESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVK 573

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              +  L++M +     +L+ Y+ +++   K  + + AI +   +   G  PDL +YNT++
Sbjct: 574  EVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE-MNEVNC 190
                K +  +EA  +  +M++  + PD  +  T+L  +V+N    EAL    E + +  C
Sbjct: 634  YGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGC 692

Query: 191  PLDLTTCNIMID-------VYGQLDMAK----------------------------DADR 215
             +D ++ + +++       V   ++ A+                            +A +
Sbjct: 693  NVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ 752

Query: 216  LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            LF   + +G+     SYN+L+R   +  L   A  LF  M+R     +  TYN ++   G
Sbjct: 753  LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 812

Query: 276  KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
            KS+  E+   + +EM  +G E   +TY+TII+   K+ +L++A  L+  L S G    P 
Sbjct: 813  KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 872

Query: 336  LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR----AGRIEEATWVFRQA 391
             Y  ++    + G +  A+ L +E+ +    P  T   IL      AG  E    +F + 
Sbjct: 873  TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             + G   DI  +  +I+      +  + +  F ++   G  PD  +  L+++  GK    
Sbjct: 933  VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERI 992

Query: 452  ETADDLYSEMQEEGCV 467
            E A  L++EM+++G +
Sbjct: 993  EEAVSLFNEMKKKGII 1008



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 204/470 (43%), Gaps = 46/470 (9%)

Query: 38  AHG-------LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           AHG       +FD M+++ +  +  T++T+    G EG   SA   L  M +  +S +  
Sbjct: 113 AHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAY 172

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
            Y+ LI    K    ++A+ ++  +   GI P +  Y+ ++  FGK +       L+ EM
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
             +GVKP+  SY+  + +  +  +F EA  +  +M +  C  D+ T  ++I V       
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA-------ELFG----------------- 246
            DA  +FW M+     P  V+Y TLL   G++       E++                  
Sbjct: 293 SDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352

Query: 247 -----------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
                      EA+ +F  M+ K +     +YN++I  + K+   ++A  L   M   G 
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            PN  T+   I  +GK+G+  +A   ++ ++S G+  D      ++ +    G +  AKR
Sbjct: 413 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472

Query: 356 LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           + +EL+     P+TI     I   ++A + +EA   F    ++G V D+     +I+   
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +  K     ++F K++     P +     +L+  G+  + +    L  EM
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 202/464 (43%), Gaps = 41/464 (8%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E +  P+   YN +L  + R  + +    L +EM +    P+  TY+T++ C  K G  
Sbjct: 548  KEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEV 607

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + AI  L  M +   + DL  Y+ ++    K     +A  +F ++K   + PD     T+
Sbjct: 608  NCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTI 666

Query: 131  INVFGKAKLFKEARLLIEE---------------------MREQGVKP------DTVSYS 163
            +  F K  L KEA   ++E                     +++ GV+       +  S  
Sbjct: 667  LPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRG 726

Query: 164  TLLNLY---------VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
             LLN +          ++ K +EA  +F +   +   L   + N +I      ++   A+
Sbjct: 727  ILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAE 786

Query: 215  RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
             LF  M+++G  P   +YN +L   G++    E + + + M RK  E   VTYNT+I   
Sbjct: 787  DLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGL 846

Query: 275  GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             KS   E+A +L   + + G  P   TY  ++    K+GK+  A  LF ++   G E + 
Sbjct: 847  VKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNC 906

Query: 335  VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQ 390
             +Y  ++  +   G   +  +L  ++ +    P   + TIL      AGR+ +    FRQ
Sbjct: 907  TIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQ 966

Query: 391  AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              + G   D+ V+  +I+   ++++    + +F +M+  G  P+
Sbjct: 967  LHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPN 1010



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 153/320 (47%)

Query: 21   AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            +YN ++R ++     ++A  LF EM++ G  PD +TY+ ++   GK    +  +   ++M
Sbjct: 768  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +       V Y+ +I    K     +AI ++  L S G  P    Y  +++   K+   
Sbjct: 828  HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             +A  L  EM E G +P+   Y+ LLN +           +F +M E     D+ +  I+
Sbjct: 888  VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            ID         D    F  + ++G++P ++ YN L+   G++E   EA+ LF  M++K I
Sbjct: 948  IDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGI 1007

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
              N+ TYN++I   GK+ +  +A  + +E+  +G +P+  TY+ +I  +  +G  D A  
Sbjct: 1008 IPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYA 1067

Query: 321  LFQKLRSSGVEIDPVLYQTM 340
             + ++   G + +   Y  +
Sbjct: 1068 AYGQMIVGGCQPNSSTYMQL 1087



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 169/345 (48%), Gaps = 4/345 (1%)

Query: 25   VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
            ++R++ + K+   AH LF++ +  G++    +Y++LI     E + D A     +M++  
Sbjct: 737  LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 796

Query: 85   VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
               D   Y+ +++   K     + + +   +   G     V YNT+I+   K+K  ++A 
Sbjct: 797  CGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAI 856

Query: 145  LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             L   +  +G  P   +Y  LL+  +++ K V+A ++F EM E  C  + T  NI+++ +
Sbjct: 857  DLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGH 916

Query: 205  GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
                  ++  +LF  M + GI+P + SY  L+     A    + +  FR +    +E ++
Sbjct: 917  RIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDL 976

Query: 265  VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
            + YN +I   GKS   E+A +L  EM+ +GI PN  TY+++I   GKAGK   AA ++++
Sbjct: 977  IVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEE 1036

Query: 325  LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            L   G +     Y  +I  Y   G   +A     ++     QPN+
Sbjct: 1037 LLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNS 1081



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/464 (22%), Positives = 200/464 (43%), Gaps = 41/464 (8%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            E   +P + +YN V+  +++ ++ E A  +F +M++  +APD  T  T++  F K G+  
Sbjct: 619  EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMK 677

Query: 72   SAISWLQQ-----------------ME--------------QDRVSGDLVLYSN--LIEL 98
             A+  +++                 ME               + ++   +L ++  L  L
Sbjct: 678  EALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPL 737

Query: 99   ARKLSDYSKAI---SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
             R L  + KA+    +F++ K  G+     +YN++I       L   A  L  EM+  G 
Sbjct: 738  IRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGC 797

Query: 156  KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
             PD  +Y+ +L+   ++ +  E L V  EM+         T N +I    +    + A  
Sbjct: 798  GPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAID 857

Query: 216  LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            L++++   G  P+  +Y  LL    ++    +A +LF  M     E N   YN ++  + 
Sbjct: 858  LYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHR 917

Query: 276  KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
             +   E    L ++M  +GI P+  +Y+ +I     AG+L+     F++L   G+E D +
Sbjct: 918  IAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLI 977

Query: 336  LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQA 391
            +Y  +I    +   +  A  L +E+++   IP      + I  L +AG+  EA  ++ + 
Sbjct: 978  VYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEEL 1037

Query: 392  FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
               G    +  +  +I  +S +    N    + +M   G  P+S
Sbjct: 1038 LRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNS 1081



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/376 (21%), Positives = 162/376 (43%), Gaps = 37/376 (9%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           ++EL R          +F  ++   +  ++  + T+    G     + A + +  MRE G
Sbjct: 107 MLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAG 166

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +  +  +Y+ L+   V++    EA+ V+  M E      + T ++++  +G+    +D D
Sbjct: 167 MSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGK---KRDVD 223

Query: 215 RLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
            + W + +M   G+ P+V SY   +RV G+A  F EA H+   M+    + +VVT+  +I
Sbjct: 224 TVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVII 283

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           ++   +     A  +  +M+    +P+ +TY T++   G +G       ++  + + G  
Sbjct: 284 QVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG-- 341

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
                Y   IV+Y  V                        +  L + GR++EA  VF + 
Sbjct: 342 -----YNDNIVSYTAV------------------------VDALCQVGRVDEALAVFDEM 372

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            + G   +   +  +I  F +   +   +E+F  M + G  P+ +   L +N YGK  + 
Sbjct: 373 KEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 432

Query: 452 ETADDLYSEMQEEGCV 467
             A   Y  M+ +G V
Sbjct: 433 LKAIQRYEHMKSKGIV 448



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 2/192 (1%)

Query: 7    DWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            +  NE   Y   P+   YN++L     A   E    LF++M ++GI PD  +Y+ LI   
Sbjct: 892  NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTL 951

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
               G  +  + + +Q+ +  +  DL++Y+ LI+   K     +A+S+F+ +K  GI+P+L
Sbjct: 952  CTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNL 1011

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
              YN++I   GKA    EA  + EE+  +G KP   +Y+ L+  Y  +     A + + +
Sbjct: 1012 YTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQ 1071

Query: 185  MNEVNCPLDLTT 196
            M    C  + +T
Sbjct: 1072 MIVGGCQPNSST 1083


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 203/425 (47%), Gaps = 4/425 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y+ V+    +  + +    L +EM+ +G+ P+ YTY+ +I    K G    A   
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M  + ++ D V+Y+ LI+   KL + S A  +F  ++   I PD + Y  +I    +
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L  EM  + ++PD V+Y+ L++ Y +  K  EA S+  +M ++    ++ T
Sbjct: 406 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              + D   +      A+ L   M + G++ ++ +YN+L+    +A    +A+ L + M+
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + VTY T++  Y KS E  +A  L+++M +R ++P  +T++ ++  +  +G L+
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
               L + +   G+  +   Y ++I  Y     +     +   +     +P      IL 
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A  ++EA ++ R     G    +S +  +I+ F + KK+    E+FE+MR  G  
Sbjct: 646 KGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 705

Query: 433 PDSHI 437
            D  I
Sbjct: 706 ADREI 710



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 231/497 (46%), Gaps = 37/497 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN++  ++ +  +   AH L  +M  RG  PD  +YST+I  + + G     +  +++M
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           +   +  +   Y+ +I L  K    ++A  +   + S GI PD V Y T+I+ F K    
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A  L +EM+++ + PD ++Y+ ++    +  + +EA  +F EM       D  T   +
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL---LRVYGEAELFGEAIHLFRLMQR 257
           ID Y +    K+A  L   M +MG+ P++V+Y  L   L   GE +   E +H    M R
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH---EMCR 491

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K +E N+ TYN+++    K+   ++A  LM++M+  G  P+A+TY+T++  + K+ ++ R
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
           A  L +++                              L  EL QP  +     +     
Sbjct: 552 AHELLRQM------------------------------LDREL-QPTVVTFNVLMNGFCM 580

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           +G +E+   + +   + G + + + +  +I+ +          E++  M + G  PD + 
Sbjct: 581 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 640

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             +++  + K R  + A  L+ +M  +G   +   +  ++  +  RK F     LFE++ 
Sbjct: 641 YNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 700

Query: 498 SDSNINKKELHHVVAGI 514
            +  +  +E++++ A I
Sbjct: 701 REGLVADREIYNIFADI 717



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 161/327 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ + SP    Y  V+  + +  +   A  LF EM  + + PD  TY+ LI  + KEG  
Sbjct: 385 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S   QM Q  ++ ++V Y+ L +   K  +   A  +   +   G+  ++  YN++
Sbjct: 445 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   KA    +A  L+++M   G  PD V+Y+TL++ Y ++ + V A  +  +M +   
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 564

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T N++++ +    M +D ++L   M + GI P+  +YN+L++ Y           
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           ++R M  K +  +  TYN +IK + K+   ++A  L ++M  +G      +Y+ +I  + 
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 684

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           K  K   A  LF+++R  G+  D  +Y
Sbjct: 685 KRKKFLEARELFEQMRREGLVADREIY 711



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 168/389 (43%), Gaps = 4/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    Y  ++    +      A+ LFDEM++R I+PD  TY+ +I    + G    A  
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M   R+  D V Y+ LI+   K     +A S+ +++   G+ P++V Y  + +   
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A  L+ EM  +G++ +  +Y++L+N   +     +A+ +  +M       D  
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   ++D Y +      A  L   M    + P+VV++N L+  +  + +  +   L + M
Sbjct: 535 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 594

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N  TYN++IK Y         T + + M  +G+ P+  TY+ +I    KA  +
Sbjct: 595 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 654

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  L + +   G  +    Y  +I  + +      A+ L  ++R+   +       I 
Sbjct: 655 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714

Query: 376 A----RAGRIEEATWVFRQAFDAGEVKDI 400
           A      G++E    +  +A +   V DI
Sbjct: 715 ADINYDEGKMELTLELCDEAIEKCLVGDI 743



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/431 (21%), Positives = 187/431 (43%), Gaps = 4/431 (0%)

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           L+  L     A+ +F      G+  +  +YN + +   +     EA  L+ +M  +G  P
Sbjct: 227 LSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIP 286

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D +SYST++N Y +  +    L +  EM       +  T N +I +  +     +A+R+ 
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M   GI P  V Y TL+  + +      A  LF  MQ+++I  + +TY  +I    ++
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
               +A  L  EM  + +EP+ +TY+ +I  + K GK+  A  L  ++   G+  + V Y
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
             +     + G V  A  LLHE+ +     N     + +  L +AG I++A  + +    
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           AG   D   +  +++ + ++++     E+  +M      P      +++N +      E 
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
            + L   M E+G + +   +  ++  Y  R +      ++  + +   +     ++++  
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646

Query: 514 IYERANRLNDA 524
            + +A  + +A
Sbjct: 647 GHCKARNMKEA 657



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 153/325 (47%), Gaps = 7/325 (2%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           LI   ++ G  P    +     + VE     EA  +F +M      + + +CN+ I    
Sbjct: 171 LIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLS 228

Query: 206 Q-LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           + LD  K A ++F    ++G+  +  SYN +     +     EA  L   M+ +    +V
Sbjct: 229 EDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           ++Y+T+I  Y +  E ++   L++EMQ +G++PN  TY+ +I +  K GK+  A  + ++
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR 380
           + S G+  D V+Y T+I  + ++G V+ A RL  E+++    P+ I     I  L + GR
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           + EA  +F +        D   +  +I+ + +  K      +  +M   G  P+      
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468

Query: 441 VLNSYGKLREFETADDLYSEMQEEG 465
           + +   K  E +TA++L  EM  +G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKG 493



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A + P    Y  ++    ++++   AH L  +M  R + P   T++ L+  F   GM 
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +     L+ M +  +  +   Y++LI+     ++      I+  + + G+VPD   YN +
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    KA+  KEA  L  +M  +G      SY+ L+  + +  KF+EA  +F +M     
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 704

Query: 191 PLDLTTCNIMIDV 203
             D    NI  D+
Sbjct: 705 VADREIYNIFADI 717


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 249/530 (46%), Gaps = 19/530 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +   + + N VL+  L   Q E+A  L   +   G AP+  T+ TLI  F K G  D
Sbjct: 245 ERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    + MEQ  +  DL+ YS LI+   K         +FS+    G+  D+V +++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +V+ K+     A ++ + M  QG+ P+ V+Y+ L+    ++ +  EA  ++ ++ +    
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             + T + +ID + +    +    L+  M KMG  P VV Y  L+    +  L   A+  
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  + I  NVV +N++I  + +    ++A  + + M   GI+P+  T++T++ +   
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIP 367
            G+L+ A  LF ++   G+E D + Y T+I A+ +     H K      L +L Q N I 
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK-----HMKPTIGLQLFDLMQRNKIS 598

Query: 368 RETAIT-----ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            + A+      +L +  RIE+A+  F    +     DI  +  MI  +   ++      +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           FE ++   + P++  + ++++   K  + + A  ++S M E+G   +   +  ++  +  
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718

Query: 483 RKDFNMLESLFERLDSDSNINKKELHH--VVAGIYERANRLNDASRIMNR 530
             D      LFE +  +  I+   + +  ++ G+ +R  R+++A+ I ++
Sbjct: 719 SVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRG-RVDEATNIFHQ 766



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 195/418 (46%), Gaps = 31/418 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  Y+ ++    +         L+++M + G  PD   Y  L+    K+G+   A+ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    +  ++V++++LI+   +L+ + +A+ +F  +   GI PD+  + T++ V   
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L   M + G++PD ++Y TL++ + ++ K    L +F  M       D+  
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           CN++I +  +    +DA + F ++ +  ++P +V+YNT++  Y       EA  +F L++
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 N VT   +I +  K+ + + A  +   M  +G +PNA+TY  ++  + K+  ++
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            +  LF++++  G+                                P+ +     I  L 
Sbjct: 724 GSFKLFEEMQEKGI-------------------------------SPSIVSYSIIIDGLC 752

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           + GR++EAT +F QA DA  + D+  +  +I  + +  +      ++E M   G  PD
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/543 (23%), Positives = 227/543 (41%), Gaps = 75/543 (13%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  +  ++    +  + + A  LF  M QRGI PD   YSTLI  + K GM      
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              Q     V  D+V++S+ I++  K  D + A  ++ R+   GI P++V Y  +I    
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     EA  +  ++ ++G++P  V+YS+L++ + +        +++ +M ++  P D+ 
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              +++D   +  +   A R    M    I  +VV +N+L+  +     F EA+ +FRLM
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK---- 311
               I+ +V T+ T++++       E+A  L   M   G+EP+A+ Y T+I  + K    
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 312 -------------------------------AGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                                            +++ A+  F  L    +E D V Y TM
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I  Y  +  +  A+R+   L+     PNT+     I +L +   ++ A  +F    + G 
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG-------------------------- 430
             +   +GC+++ FS++       ++FE+M+  G                          
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762

Query: 431 ---------YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
                      PD    A+++  Y K+     A  LY  M   G V  D +  + LS Y 
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG-VKPDDLLQRALSEYN 821

Query: 482 ARK 484
             K
Sbjct: 822 PPK 824



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 212/456 (46%), Gaps = 4/456 (0%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + E+    P + AY+ ++    +A    + H LF +   +G+  D   +S+ I  + K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
              +A    ++M    +S ++V Y+ LI+   +     +A  ++ ++   G+ P +V Y+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+ F K    +    L E+M + G  PD V Y  L++   +    + A+    +M   
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           +  L++   N +ID + +L+   +A ++F  M   GI P V ++ T++RV        EA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + LF  M +  +E + + Y T+I  + K ++      L   MQ   I  +    + +I +
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
             K  +++ A+  F  L    +E D V Y TMI  Y  +  +  A+R+   L+     PN
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           T+     I +L +   ++ A  +F    + G   +   +GC+++ FS++       ++FE
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           +M+  G  P     +++++   K    + A +++ +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 102/214 (47%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + S  +   NVV+  + +  + E A   F+ + +  + PD  TY+T+I  +      D A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
               + ++      + V  + LI +  K +D   AI +FS +   G  P+ V Y  +++ 
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K+   + +  L EEM+E+G+ P  VSYS +++   +  +  EA ++F +  +     D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
           +    I+I  Y ++    +A  L+  M + G+ P
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 71/144 (49%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+     +++  + +    + A  +F  M ++G  P+  TY  L+  F K    + + 
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M++  +S  +V YS +I+   K     +A +IF +   + ++PD+VAY  +I  +
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786

Query: 135 GKAKLFKEARLLIEEMREQGVKPD 158
            K     EA LL E M   GVKPD
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPD 810



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E +  P +  YN ++      ++ + A  +F+ ++     P+  T + LI    K    D
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI     M +     + V Y  L++   K  D   +  +F  ++  GI P +V+Y+ +I
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +   K     EA  +  +  +  + PD V+Y+ L+  Y +  + VEA  ++  M
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 55/115 (47%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I  E    P+   Y  ++    ++   E +  LF+EM+++GI+P   +YS +I    K G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             D A +   Q    ++  D+V Y+ LI    K+    +A  ++  +  +G+ PD
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 219/478 (45%), Gaps = 18/478 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAK-------QWELAHGLFDEMRQRG---IAPDR 54
           + D + + AR   S++A N +L  V RA           LA  +F+ M + G   +APD 
Sbjct: 86  LFDELLQRARPG-SIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDI 144

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FS 113
            T+  LI+C    G  +   + L Q+ +  +    V ++ L+         S A++I   
Sbjct: 145 ATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLR 204

Query: 114 RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVE 171
           R+   G  PD+ +Y T++      K  +EA  LI  M E G    P+ VSY+T+++ + +
Sbjct: 205 RMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFK 264

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
                +A ++F +M +   P ++ TCN +ID   ++     A+ +   M    I P+  +
Sbjct: 265 EGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTT 324

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           YN+L+  Y  +  + EA+ + + M R     NVVTY+ +I    KS  H +A  +   M 
Sbjct: 325 YNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMI 384

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
             G +PNA TY +++  +   G L     +   +  +G+     ++   I AY + G + 
Sbjct: 385 QSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLD 444

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A    ++++Q    P+ +   T I  L + GR+++A   F Q  D G   DI  F  +I
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLI 504

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             F+ + K+    E+F +M   G  P+ +    +++   K  +   A  L+  M   G
Sbjct: 505 HGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAG 562



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 181/406 (44%), Gaps = 23/406 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y  V+    +      A+ LF +M   GI P+  T +++I    K    D A + 
Sbjct: 250 PNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 309

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           LQQM  + +  +   Y++LI        +++A+ I   +   G  P++V Y+ +I+   K
Sbjct: 310 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCK 369

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           + L  EAR +   M + G KP+  +Y +LL+ Y      V+  +V   M +         
Sbjct: 370 SGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHV 429

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI I  Y +     +A   F  M++ G  P +V+Y T++    +     +A+  F  M 
Sbjct: 430 FNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMI 489

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +++T+NT+I  +    + EKA  L  EM +RGI PN  T++++I    K GK+ 
Sbjct: 490 DDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVT 549

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------------- 360
            A  LF  +  +G + + V Y TMI  Y   G V    +LL ++                
Sbjct: 550 EARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 609

Query: 361 -------RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
                   +P+ +  +T I      GRIE+   +FR+     +  D
Sbjct: 610 DGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTD 655



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 201/430 (46%), Gaps = 9/430 (2%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD--RVSGDLVLYSNLIELARKL 102
           M + G  PD ++Y+TL+     E   + A   +  M +D      ++V Y+ +I    K 
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
            D  KA ++F ++   GI P++V  N++I+   K +   +A  ++++M ++ + P+  +Y
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           ++L++ Y+ + ++ EA+ +  EM+      ++ T +++ID   +  +  +A  +F SM +
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P+  +Y +LL  Y       +  ++  LM +  +      +N  I  Y K    ++
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A+    +MQ +G  P+ + Y+T+I    K G+LD A   F ++   G+  D + + T+I 
Sbjct: 446 ASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505

Query: 343 AYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
            +   G    A+ L +E+      PN     + I  L + G++ EA  +F     AG   
Sbjct: 506 GFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN---SYGKLREFETAD 455
           ++  +  MI  +    +   V+++ + M   G  P +     +L+   S G   +  T  
Sbjct: 566 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCK 625

Query: 456 DLYSEMQEEG 465
            L     E+G
Sbjct: 626 TLIDSCCEDG 635



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 21/339 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++   L + QW  A  +  EM + G  P+  TYS LI C  K G+   A   
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M Q     +   Y +L+       +     ++   +  +G+ P    +N  I  + K
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCK 439

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA L   +M++QG  PD V+Y+T+++   +  +  +A+S F +M +     D+ T
Sbjct: 440 CGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIIT 499

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLM 255
            N +I  +      + A+ LF+ M   GI P+V ++N+++ +++ E ++  EA  LF LM
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVT-EARKLFDLM 558

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-------------------NRGIE 296
            R   + NVV+YNTMI  Y  + E  +   L+ +M                    + G++
Sbjct: 559 PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLK 618

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           P+ +T  T+I    + G+++    LF+++     + D +
Sbjct: 619 PDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 657



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 18/263 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N+ +    +  + + A   F++M+Q+G  PD   Y+T+I    K G  D A+S 
Sbjct: 425 PGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSR 484

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             QM  D +S D++ ++ LI        + KA  +F  +   GI P++  +N+MI+   K
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFK 544

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR L + M   G KP+ VSY+T+++ Y    +  E + +  +M  +       T
Sbjct: 545 EGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 604

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D                 M  MG+ P VV+  TL+    E     + + LFR M 
Sbjct: 605 FNTLLD----------------GMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648

Query: 257 RKEIEQNVVTYNTMIKIYGKSLE 279
            K  + + +T N  IK+ G +++
Sbjct: 649 GKADKTDTITEN--IKLRGVTVK 669



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 16/227 (7%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++  + P + AY  V+  + +  + + A   F +M   G++PD  T++TLI  F   G +
Sbjct: 454 QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A     +M    +  ++  ++++I+   K    ++A  +F  +  +G  P++V+YNTM
Sbjct: 514 EKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ +  A    E   L+++M   G+KP  V+++TLL+                 M  +  
Sbjct: 574 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD----------------GMVSMGL 617

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
             D+ TC  +ID   +    +D   LF  M         ++ N  LR
Sbjct: 618 KPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLR 664


>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 193/371 (52%), Gaps = 16/371 (4%)

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFS----RLKSSGIVPDLVAYNTMINVFGKAKL 139
           R  GD +L  + + +   +++   A+  F     RLK S    +++ YN  + VF K + 
Sbjct: 135 RCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSR---EVILYNVTLKVFRKCRN 191

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
              A  L +EM E+GVKPD +++ST+++    +    +A+  F +M E  C  D  T + 
Sbjct: 192 LDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSA 251

Query: 200 MIDVYGQLDMAKDADRLFWSMR--KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           MID YG+      A +L+   R  K  IDP  V+++TL+R+YG +  F   ++++  M+ 
Sbjct: 252 MIDAYGRAGNVDMALKLYDRARTEKWRIDP--VTFSTLIRIYGMSGNFDGCLNVYEEMKA 309

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++ N+V YNT++   G++    +A N+ +EM N G++P+  TY+ ++  +G+A   + 
Sbjct: 310 LGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAED 369

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAI 372
           A +++++++  G+E+  VLY T++     VG    A  +  +++      P++    + I
Sbjct: 370 ALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLI 429

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           TI + +G++ EA  +     +AG   +I V   +I+ + +  +   V+  F+++      
Sbjct: 430 TIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDIT 489

Query: 433 PDSHIIALVLN 443
           PD      +LN
Sbjct: 490 PDDRFCGCMLN 500



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 3/315 (0%)

Query: 14  RYSPS--VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           R  PS  V  YNV L+   + +  + A  LFDEM +RG+ PD  T+ST+I+C     + +
Sbjct: 169 RLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPN 228

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+ W ++M +     D V YS +I+   +  +   A+ ++ R ++     D V ++T+I
Sbjct: 229 KAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLI 288

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            ++G +  F     + EEM+  GVKP+ V Y+TLL+      +  +A +++ EM      
Sbjct: 289 RIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQ 348

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T   ++  YG+   A+DA  ++  M++ G++ SVV YNTLL +  +     EA  +
Sbjct: 349 PSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAI 408

Query: 252 FRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           F  M+       +  T++++I IY  S +  +A  ++  M   G EPN    +++I  +G
Sbjct: 409 FEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYG 468

Query: 311 KAGKLDRAAMLFQKL 325
           KA + D     F +L
Sbjct: 469 KANRTDEVVRTFDRL 483



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 170/337 (50%), Gaps = 5/337 (1%)

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
           + S +++LY+  +++ RK  +  +A  +F  +   G+ PD + ++T+I+    + L  +A
Sbjct: 171 KPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKA 230

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               E+M E G  PD V+YS +++ Y        AL ++         +D  T + +I +
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           YG          ++  M+ +G+ P++V YNTLL   G A+   +A ++++ M    ++ +
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
             TY  +++ YG++   E A  + +EM+ +G+E + + Y+T++A+    G  + AA +F+
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410

Query: 324 KLRSSG-VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
            ++SSG    D   + ++I  Y   G V+ A+ +L+ +     +PN     + I    +A
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            R +E    F +  +     D    GCM+ + +++ K
Sbjct: 471 NRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPK 507



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A   FR  +R +  + V+ YN  +K++ K    ++A  L  EM  RG++P+ IT+STII+
Sbjct: 162 AFGFFR--KRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIIS 219

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP---- 363
               +   ++A   F+K+   G   D V Y  MI AY R G V  A +L    R      
Sbjct: 220 CARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRI 279

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + +   T I I   +G  +    V+ +    G   ++ ++  +++   R K+      ++
Sbjct: 280 DPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIY 339

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           ++M + G  P     A +L +YG+ R  E A  +Y EM+E+G   S  ++  +L++    
Sbjct: 340 KEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADV 399

Query: 484 KDFNMLESLFERLDSDSNINKKE-LHHVVAGIYERANRLNDASRIMNRM 531
                  ++FE + S  N          +  IY  + ++++A  ++N M
Sbjct: 400 GYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAM 448



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 5/304 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+ + V+ +      A++LF  M + G+ P  ++++T++     + L  +A+  F  M  
Sbjct: 180 NVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPE 239

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                + VTY+ MI  YG++   + A  L    +      + +T+ST+I I+G +G  D 
Sbjct: 240 FGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDG 299

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
              +++++++ GV+ + V+Y T++ A  R      AK +  E+      P       L R
Sbjct: 300 CLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLR 359

Query: 378 A-GRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG-YF 432
           A GR    E+A  V+++  + G    + ++  ++ + +          +FE M+S+G   
Sbjct: 360 AYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCM 419

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PDS   + ++  Y    +   A+ + + M E G   +  V   ++  YG     + +   
Sbjct: 420 PDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRT 479

Query: 493 FERL 496
           F+RL
Sbjct: 480 FDRL 483



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 5/201 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDSAISW 76
           SV  YN +L         E A  +F++M+  G   PD +T+S+LIT +   G    A + 
Sbjct: 385 SVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAM 444

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +     ++ + ++LI+   K +   + +  F RL    I PD      M+NV  +
Sbjct: 445 LNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQ 504

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   +E   LI+ + +   K   V    L     E     EA  +F   + ++  +    
Sbjct: 505 SPK-EELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELF---DSISADVKKAY 560

Query: 197 CNIMIDVYGQLDMAKDADRLF 217
           CN +ID+   L++ + A  LF
Sbjct: 561 CNCLIDLCVNLNLLEKACELF 581


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 218/489 (44%), Gaps = 39/489 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS   YN V+  ++++   +LA+  F +M      PDR+TY+ LI    + G+ D A+ 
Sbjct: 214 SPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALR 273

Query: 76  WLQQMEQDRVSGDLVLYSNLIE------------------LARKLSDYSKAISIFSRLKS 117
            ++QME    S ++  Y+ LI+                   ARK+S     I  F     
Sbjct: 274 LVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVF 333

Query: 118 SGIVPDL-----------------VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + P+                  +A +T++       + +EA  L+++  + G KPD+ 
Sbjct: 334 RCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSA 393

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +++  +N  ++     E  ++     E       +T   +I          + +  F  M
Sbjct: 394 TFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQM 453

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            K G+  +V SYN ++  + +  +  +A + F+ MQ K I  N+VT+NT+I  Y K  E 
Sbjct: 454 VKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEI 513

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            K+ +L+  +   G +P+  T+S+II    +A +++ A   F ++   G+  + V Y  +
Sbjct: 514 CKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNIL 573

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I +   +G V  + +LL +++     P+       I    R G++E+A  +F      G 
Sbjct: 574 IHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGL 633

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + D   +   I++F ++ ++    E+F  M + G  PDS    ++L++  K  +FE A  
Sbjct: 634 IPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQK 693

Query: 457 LYSEMQEEG 465
           +     E G
Sbjct: 694 IAKTCSEWG 702



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 189/466 (40%), Gaps = 39/466 (8%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F ++   GI+P    Y+ +I    K    D A    QQM  D    D   Y+ LI    
Sbjct: 204 IFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVC 263

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +     +A+ +  +++  G  P++  Y  +I+ F  AK   EA  ++E M+ + V P   
Sbjct: 264 RSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEA 323

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +  + ++         +A  +  E  E    L    C+ ++      +MA++A  L    
Sbjct: 324 TIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKF 383

Query: 221 RKMGIDPSVVSYNTLL-----------------RVYGEAELFG----------------- 246
            K+G  P   ++N  +                 R   +   FG                 
Sbjct: 384 GKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKV 443

Query: 247 -EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            E  H F  M +  +  NV +YN +I  + K+   +KATN  +EMQ +GI PN +T++T+
Sbjct: 444 TEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTL 503

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----R 361
           I  + K G++ ++  L   L   G + D   + ++I    R   +  A     E+     
Sbjct: 504 IDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGL 563

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PN +     I  L   G +  +  + R+    G   D+  F  +I+ F R  K  +  +
Sbjct: 564 SPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKK 623

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +F  M S G  PD++     +  + +   F  A +L+  M+  GC+
Sbjct: 624 LFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCM 669



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 6/322 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +N+ +  +++         + D   ++G+     TY  LI      G      
Sbjct: 388 HKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGN 447

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  QM +D +  ++  Y+ +I+   K S   KA + F  ++  GI P+LV +NT+I+ +
Sbjct: 448 HYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGY 507

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     ++R L+  + E G KPD  ++S++++      +  +AL  F+EM       + 
Sbjct: 508 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNA 567

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T NI+I     L +  D  R    +RKM   GI+P V S+N L++ +       +A  L
Sbjct: 568 VTYNILIH---SLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M    +  +  TY   IK++ +S    +A  L   M+  G  P++ T + I+    K
Sbjct: 625 FSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVK 684

Query: 312 AGKLDRAAMLFQKLRSSGVEID 333
             + + A  + +     G+ ++
Sbjct: 685 QDQFEAAQKIAKTCSEWGILVN 706



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 127/269 (47%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F++M + G+  +  +Y+ +I CF K  M D A +  ++M+   +  +LV ++ LI+   K
Sbjct: 450 FNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCK 509

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  K+  +   L   G  PD+  ++++I+   +AK  ++A     EM   G+ P+ V+
Sbjct: 510 GGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVT 569

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+ L++          ++ +  +M       D+ + N +I  + ++   +DA +LF SM 
Sbjct: 570 YNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSML 629

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            +G+ P   +Y   ++V+ ++  F EA  LF  M+      +  T N ++    K  + E
Sbjct: 630 SLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFE 689

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            A  + +     GI  N    S   A+ G
Sbjct: 690 AAQKIAKTCSEWGILVNFAAISEDSALLG 718



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 90/176 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P +F ++ ++  + RAKQ E A G F EM   G++P+  TY+ LI      G   
Sbjct: 525 EHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVP 584

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            ++  L++M+ D ++ D+  ++ LI+   ++     A  +FS + S G++PD   Y   I
Sbjct: 585 RSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
            VF ++  F EA+ L   M   G  PD+ + + +L+  V+  +F  A  +    +E
Sbjct: 645 KVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSE 700



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/362 (19%), Positives = 143/362 (39%), Gaps = 4/362 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           ++ +   +K+SG   +      +I  +G+  L K    +  ++   G+ P T  Y+ +++
Sbjct: 166 SVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVID 225

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
             V+++    A   F +M+  NC  D  T NI+I    +  +  +A RL   M  +G  P
Sbjct: 226 ALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSP 285

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V +Y  L+  +  A+   EA  +   M+ +++  +  T  + I    + +   KA  L 
Sbjct: 286 NVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELA 345

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY----QTMIVA 343
            E   R      +   T++           A  L +K    G + D   +      +I  
Sbjct: 346 IEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKG 405

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           ++   +     R + +  +         I  L  AG++ E    F Q    G + ++  +
Sbjct: 406 FDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSY 465

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+ F +          F++M+  G  P+      +++ Y K  E   + DL   + E
Sbjct: 466 NMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLE 525

Query: 464 EG 465
            G
Sbjct: 526 HG 527



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 49/111 (44%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P VF++N ++++  R  + E A  LF  M   G+ PD YTY   I  F + G F+ A  
Sbjct: 599 NPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKE 658

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
               ME +    D    + +++   K   +  A  I       GI+ +  A
Sbjct: 659 LFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFAA 709


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 6/462 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SP++  YN++++   + +Q E A  L D M  + + PD ++Y TLI    K G  
Sbjct: 143 ESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL 202

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNT 129
             A+    +M    V  D+  Y+ LI+   K  DY K   I+ RL K   + P++V YN 
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           MIN   K   F E+  + E M +   + D  +YS+L++   E      A+ V+ E+ E +
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
             +D  T N M++ + +    K++  L+  M K     +VVSYN L++   E     EAI
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAI 381

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            ++ L+ +K       TY  +I    K+    KA  + +E ++   + +A  YS+++   
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGL 441

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
            K G++D A  +  ++   G ++DP +   +I  + R   +  A     E+      P  
Sbjct: 442 CKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTI 501

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I  L +A R  EA    ++  +     D+     +++   + KK    + ++++
Sbjct: 502 VSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQ 561

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
               G+ PD  +  ++++    + + E A  LYS M+   CV
Sbjct: 562 ALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 215/456 (47%), Gaps = 10/456 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +YN +L   +   +W+ A           ++P+  TY+ LI    K+   + AIS 
Sbjct: 114 PGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISL 173

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  D+  Y  LI    K+ D   A+ +F  +   G+V D+  YN +I+ F K
Sbjct: 174 LDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFK 233

Query: 137 AKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
              + + + + E + ++  V P+ V+Y+ ++N   +  +F E+L ++  M +     D+ 
Sbjct: 234 HGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMF 293

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +I    +      A R++  + +  +    V++N +L  +  A    E+  L+ +M
Sbjct: 294 TYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM 353

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             KE  Q VV+YN +IK   ++ + E+A ++ + +  +G  P + TY  +I    K G+L
Sbjct: 354 G-KENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRL 412

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------PNTIPRE 369
           ++A  +F++      ++D   Y +M+    + G +  A  +++++ +      P+     
Sbjct: 413 NKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC--N 470

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I    RA ++E+A   FR+    G    I  +  +I+   + ++++      ++M   
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + PD    +L+++   + ++ E A +L+ +  ++G
Sbjct: 531 EWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 201/418 (48%), Gaps = 15/418 (3%)

Query: 59  TLITCFGKEGMFDSAISWLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           T+I  + K  M + A+   Q M QD       +  Y+ L+    +L+++ +A S     +
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNM-QDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFE 143

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S  + P+L  YN +I +  K +  ++A  L++ M  Q +KPD  SY TL+N  V+    +
Sbjct: 144 SMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLL 203

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDA-DRLFWSMRKMGIDPSVVSY 232
            AL VF EM+      D+T  N++ID +   G  D  K+  +RL   ++   + P+VV+Y
Sbjct: 204 GALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERL---VKDCSVYPNVVTY 260

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           N ++    +   F E++ ++  M + E E+++ TY+++I    ++   + A  + +E+  
Sbjct: 261 NIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVE 320

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
             +  +A+T++ ++  + +AGK+  +  L+  +     +   V Y  +I      G V  
Sbjct: 321 SSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEE 379

Query: 353 AKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  +   L +    P  T   +    L + GR+ +A  +F++A D     D   +  M++
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVD 439

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
              +  +    I +  +M   GY  D H+   ++N + +  + E A + + EM+ +GC
Sbjct: 440 GLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGC 497



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 152/336 (45%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+        +V +YN++++ +    + E A  +++ + ++G  P+  TY  LI    K 
Sbjct: 350 WMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  + A+   ++ E      D   YS++++   K     +AISI +++   G   D    
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC 469

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN F +A   ++A     EM  +G  P  VSY+TL+    +  +F EA S   EM E
Sbjct: 470 NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLE 529

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D+ TC++++D   Q    + A  L+      G  P +  YN L+          +
Sbjct: 530 KEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLED 589

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ L+  M+R     N+VT NT+++   K  ++EKA+ +   +   G+ P+ I+Y+  I 
Sbjct: 590 ALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIK 649

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                 ++  A        + G+    V +  ++ A
Sbjct: 650 GLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/504 (21%), Positives = 202/504 (40%), Gaps = 110/504 (21%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++++LDW+  +    P VF+Y  ++  +++      A  +FDEM  RG+  D   Y+ L
Sbjct: 169 KAISLLDWMWSQ-NLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNML 227

Query: 61  ITCF--------GKE----------------------------GMFDSAISWLQQMEQDR 84
           I  F        GKE                            G FD ++   ++M ++ 
Sbjct: 228 IDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF---GKAK--- 138
              D+  YS+LI    +  +   A+ ++  +  S +V D V +N M+N F   GK K   
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESF 347

Query: 139 -----------------------LFKEARL-----LIEEMREQGVKPDTVSYSTLLNLYV 170
                                  LF+  ++     + E + ++G +P++ +Y  L++   
Sbjct: 348 ELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLC 407

Query: 171 ENHKFVEALSVFAE-----------------------------------MNEVNCPLDLT 195
           +N +  +AL +F E                                   M++    LD  
Sbjct: 408 KNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPH 467

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN +I+ + +    +DA   F  M   G  P++VSYNTL++   +AE F EA    + M
Sbjct: 468 VCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM 527

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             KE + +++T + ++    +  + E A NL Q+  ++G +P+   Y+ ++       KL
Sbjct: 528 LEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKL 587

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRETA 371
           + A  L+  ++ S    + V   T++    +V     A      +L +   P+ I     
Sbjct: 588 EDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNIT 647

Query: 372 ITILARAGRIEEATWVFRQAFDAG 395
           I  L    RI +A      A + G
Sbjct: 648 IKGLCSCSRISDAIEFLNDALNRG 671



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 6/283 (2%)

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEA 248
           CP        +I  Y +  M+  A   F +M+ + G  P V SYNTLL  + E   +  A
Sbjct: 76  CPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
               R  +  ++  N+ TYN +IKI  K  + EKA +L+  M ++ ++P+  +Y T+I  
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----P 363
             K G L  A  +F ++   GV  D   Y  +I  + + G     K +   L +     P
Sbjct: 196 MVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYP 255

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +     I  L + GR +E+  ++ +       KD+  +  +I            + V+
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVY 315

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +++  +    D+     +LN + +  + + + +L+  M +E C
Sbjct: 316 KEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC 358



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 111/254 (43%), Gaps = 6/254 (2%)

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF S  +     + V ++ L R+  ++ L      +  +++ ++         T+IK Y 
Sbjct: 32  LFESASRNKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIKAYA 91

Query: 276 KSLEHEKATNLMQEMQN-RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           K+    KA +  Q MQ+  G +P   +Y+T++  + +  + DRA    +   S  V  + 
Sbjct: 92  KNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNL 151

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQ 390
             Y  +I    +   +  A  LL  +     +P+     T I  + + G +  A  VF +
Sbjct: 152 QTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDE 211

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM-RSAGYFPDSHIIALVLNSYGKLR 449
               G V D++ +  +I+ F ++  Y    E++E++ +    +P+     +++N   K  
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCG 271

Query: 450 EFETADDLYSEMQE 463
            F+ + +++  M +
Sbjct: 272 RFDESLEIWERMTK 285


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 210/463 (45%), Gaps = 21/463 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  YN +L+   R      A  L   M++ GIAP R TY+TL++ + + G    A +
Sbjct: 242 SPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATN 301

Query: 76  WLQQMEQDRVSGDLVLYSNL---------IELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            ++ M       DL  Y+ L         ++ A KL D  + +SI S        PD+V 
Sbjct: 302 VVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS--------PDVVT 353

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           YNT+++   K +   +A  L+EEMR++GVK   V+++ ++       +  EAL     M 
Sbjct: 354 YNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMT 413

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           E     D+ T N +ID Y +      A  L   M + G+     + NTLL    + + + 
Sbjct: 414 EEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYE 473

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  L R   ++    + V+Y T++  Y K  + E A  L  EM  R + P+  TY+T+I
Sbjct: 474 EAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLI 533

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQ 362
                 GKL  A     +L   G+  D   Y  +I AY + G +  A     ++L    +
Sbjct: 534 KGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFK 593

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+ +   T +  L   G++E+A  +F    + G+  D+  +  +I+   ++      +  
Sbjct: 594 PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHF 653

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           F  M + G  PD+    +VL++  +    E A ++  ++ E G
Sbjct: 654 FADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 202/456 (44%), Gaps = 7/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGL--FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           PS+ A N VL  + R+        L  F  +    + P+ YT++ L+     +G    A+
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L  M+   +S D+V Y+ L++   +     +A ++ +R+K  GI P    YNT+++ +
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLD 193
            +    K+A  ++E M   G +PD  +Y+ L     +  K  EA  +  EM  ++    D
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N ++D   +   + DA  L   MR  G+  S+V++N +++         EA+   +
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M  + +  +V+TYNT+I  Y K+    KA  LM EM   G++ +  T +T++    K  
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           + + A  L +     G   D V Y T++ AY +      A  L  E+ +    P+     
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I  L   G++ EA     +    G V D + +  +I  + +        +   KM   
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN 590

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + PD      ++N      + E A  L+    E+G
Sbjct: 591 YFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 198/411 (48%), Gaps = 16/411 (3%)

Query: 4   AILDWINEEAR---------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI-APD 53
           A L WI +            + P ++ YNV+   + +A + + A  L DEM    I +PD
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 54  RYTYSTLI-TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
             TY+TL+  CF  +   D A++ L++M    V   LV ++ +++   +     +A+   
Sbjct: 351 VVTYNTLVDACFKYQRSSD-ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409

Query: 113 SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
             +   G+ PD++ YNT+I+ + KA+   +A +L++EM   G+K DT + +TLL    + 
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
            ++ EA  +     +     D  +   ++  Y + +  + A  L+  M K  + PS+ +Y
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NTL++         EAI     + +K +  +  TYN +I  Y K  + EKA     +M  
Sbjct: 530 NTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLE 589

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
              +P+ +T +T++      GKL++A  LF+     G ++D + Y T+I A  + G V  
Sbjct: 590 NYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDT 649

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           A     ++     QP+       ++ L+ AGR EEA  +  +  ++G++ +
Sbjct: 650 ALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 6/284 (2%)

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N+++  +       DA     +M+  G+ P VV+YNTLL+ +    + GEA  L   M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +++ I     TYNT++  Y +    ++ATN+++ M   G EP+  TY+ + A   +AGK+
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 316 DRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           D A  L  ++   S V  D V Y T++ A  +    + A  LL E+R    + + +    
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L R G++EEA    +   + G   D+  +  +I+ + + +  A    + ++M  +G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              D+  +  +L +  K + +E A++L     + G V  D+V +
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV-PDEVSY 494



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 141/303 (46%), Gaps = 7/303 (2%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L  + EE   +P V  YN ++    +A+    A  L DEM + G+  D +T +TL+    
Sbjct: 409 LKMMTEEG-LAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           KE  ++ A   L+   Q     D V Y  ++    K +    A+ ++  +    + P + 
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIY 527

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YNT+I          EA   + E+ ++G+ PD  +Y+ +++ Y +     +A     +M
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 587

Query: 186 NEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            E     D+ TCN +++   ++G+L+    A +LF S  + G    V++YNTL++   + 
Sbjct: 588 LENYFKPDVVTCNTLMNGLCLHGKLE---KAIKLFESWAEKGKKVDVITYNTLIQALCKD 644

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
                A+H F  M+ + ++ +  TYN ++    ++   E+A N++ ++   G      +Y
Sbjct: 645 GDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704

Query: 303 STI 305
             I
Sbjct: 705 PLI 707



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN +++ + +    + A   F +M  RG+ PD +TY+ +++   + G  + A + L 
Sbjct: 631 VITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLH 690

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP--DLVAYNTMINVFGK 136
           ++++     +   Y  LI+ + +     K   + S  +S G     D  +YN  +     
Sbjct: 691 KLDESGKLSERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCV 749

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
               KEA+ +++EM ++G+  D+ +Y TL+   ++  K
Sbjct: 750 GGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787


>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Brachypodium distachyon]
          Length = 807

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 255/556 (45%), Gaps = 29/556 (5%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I DW   E  +  +V  YNVVL  V RA +W+L  GL+ +M   G+ P+  TY TL
Sbjct: 123 RAVEIFDWFRRERCHELNVIHYNVVLCVVGRATRWDLVVGLWHQMHSCGVVPENATYGTL 182

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  + K G   +A+ WL  M +  +  D V  S +++  +K  +Y KA   F R  S   
Sbjct: 183 IDVYCKGGRERAALLWLGDMCKRGLVPDEVTMSTVLQAYKKAGEYEKAELFFRRWSSESH 242

Query: 121 -------VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
                    +L  YNT+I+ +GKA   ++      +M  +GV PD  +++TL++++ ++H
Sbjct: 243 KRKEGHRCYNLYTYNTLIDTYGKAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHH 302

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y ++D    A+  F  M+   + P  VS  
Sbjct: 303 RMEQVSSLVRMMEEFQCLPDTRTYNILISLYREIDEIDVAEFYFCKMKAENLVPDTVSCR 362

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  +A  L + M    +  +  T + + ++Y  +   E++    +   ++
Sbjct: 363 TLLYGYSTRGMVTKAEALIKEMDESGLVIDEYTQSALTRMYVNTGMLERSWRWFERFCHQ 422

Query: 294 -GIEPNAITYSTIIAIWGKAGKL---DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            G E     +S  I  +G+ G +   ++A M   + +   V +  V    MI AY  V  
Sbjct: 423 MGSE----CFSANIDAFGEKGCIILAEKAFMCCLERKMLCVSVCNV----MIKAYGLVEK 474

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           +  A  +   + +    P+ +   + I +L+ A   E+A +  R+   A    D   +  
Sbjct: 475 LDEACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSV 534

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +I  F++      V  +F +M ++G   D+++ ++++++Y ++     A   +  + + G
Sbjct: 535 IISSFAKKDNLHMVECLFREMATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVTKAG 594

Query: 466 CVFSDQVHFQMLSLY---GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
              S  ++  ++ LY   G   + +    L + LD+D+N+      + +  +Y     +N
Sbjct: 595 LCESSTIYNSLIKLYTKAGYLAEAHETYKLLKSLDTDTNLYAS---NCMISLYSDHCMVN 651

Query: 523 DASRIMNRMNKRRTFN 538
           +A  I   +      N
Sbjct: 652 EAREIFESLKASGCAN 667



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 214/463 (46%), Gaps = 17/463 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E     +++ YN ++    +A Q E     F +M + G+ PD +T++TLI  +GK    
Sbjct: 245 KEGHRCYNLYTYNTLIDTYGKAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHHRM 304

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +   S ++ ME+ +   D   Y+ LI L R++ +   A   F ++K+  +VPD V+  T+
Sbjct: 305 EQVSSLVRMMEEFQCLPDTRTYNILISLYREIDEIDVAEFYFCKMKAENLVPDTVSCRTL 364

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  +    +  +A  LI+EM E G+  D  + S L  +YV       +   F    E  C
Sbjct: 365 LYGYSTRGMVTKAEALIKEMDESGLVIDEYTQSALTRMYVNTGMLERSWRWF----ERFC 420

Query: 191 PLDLTTC-NIMIDVYGQLDMAKDADRLFWSM--RKMGIDPSVVSYNTLLRVYGEAELFGE 247
               + C +  ID +G+      A++ F     RKM     V   N +++ YG  E   E
Sbjct: 421 HQMGSECFSANIDAFGEKGCIILAEKAFMCCLERKM---LCVSVCNVMIKAYGLVEKLDE 477

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +   M+R  +  + +TY+++I++   +   EKA   +++M    +  + + YS II+
Sbjct: 478 ACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIIS 537

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + K   L     LF+++ +SG+  D  +Y  +I AY  VG V  A      + +     
Sbjct: 538 SFAKKDNLHMVECLFREMATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVTKAGLCE 597

Query: 368 RETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             T     I +  +AG + EA   ++         ++    CMI L+S +       E+F
Sbjct: 598 SSTIYNSLIKLYTKAGYLAEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIF 657

Query: 424 EKMRSAGYFPD-SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           E ++++G   + SH + + L  Y K+  ++ A  +  EMQ  G
Sbjct: 658 ESLKASGCANEFSHAMMVCL--YKKVARYDEAHRISKEMQALG 698



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/395 (22%), Positives = 163/395 (41%), Gaps = 69/395 (17%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ----QMEQDRVSGDLVLYS 93
           A  L  EM + G+  D YT S L   +   GM + +  W +    QM  +  S ++  + 
Sbjct: 377 AEALIKEMDESGLVIDEYTQSALTRMYVNTGMLERSWRWFERFCHQMGSECFSANIDAFG 436

Query: 94  N-----------LIELARKLSDYS------KAISIFSRLKSS----------GIVPDLVA 126
                       +  L RK+   S      KA  +  +L  +          G++PD + 
Sbjct: 437 EKGCIILAEKAFMCCLERKMLCVSVCNVMIKAYGLVEKLDEACEVADCMERYGVLPDYLT 496

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV--ENHKFVEALSVFAE 184
           Y+++I +   AKL ++A   + +M    +  D V YS +++ +   +N   VE L  F E
Sbjct: 497 YSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVECL--FRE 554

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D    +I+ID Y ++     A   F  + K G+  S   YN+L+++Y +A  
Sbjct: 555 MATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVTKAGLCESSTIYNSLIKLYTKAGY 614

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG----------------------------- 275
             EA   ++L++  + + N+   N MI +Y                              
Sbjct: 615 LAEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIFESLKASGCANEFSHAMM 674

Query: 276 -----KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                K   +++A  + +EMQ  G+    ++Y+++I ++   GK + A  +FQ + +S  
Sbjct: 675 VCLYKKVARYDEAHRISKEMQALGLLTQVLSYNSVIQMYISCGKTEEAVKIFQNMLASST 734

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
             +   ++ + V   + G+       L  LR+ NT
Sbjct: 735 PPNDATFKALKVILVKEGVSNIEITKLESLRRSNT 769



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 24/292 (8%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           Q D  +  +   W  R+   + +V+ YN +L V G A  +   + L+  M    +     
Sbjct: 118 QKDWRRAVEIFDWFRRERCHELNVIHYNVVLCVVGRATRWDLVVGLWHQMHSCGVVPENA 177

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY T+I +Y K      A   + +M  RG+ P+ +T ST++  + KAG+ ++A + F++ 
Sbjct: 178 TYGTLIDVYCKGGRERAALLWLGDMCKRGLVPDEVTMSTVLQAYKKAGEYEKAELFFRRW 237

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
            S                       +H ++  H  R  N     T I    +AG++E+ +
Sbjct: 238 SSE----------------------SHKRKEGH--RCYNLYTYNTLIDTYGKAGQLEKVS 273

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             F Q    G V DI  F  +I ++ ++ +   V  +   M      PD+    ++++ Y
Sbjct: 274 DAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQCLPDTRTYNILISLY 333

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
            ++ E + A+  + +M+ E  V        +L  Y  R      E+L + +D
Sbjct: 334 REIDEIDVAEFYFCKMKAENLVPDTVSCRTLLYGYSTRGMVTKAEALIKEMD 385



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y+ +++ +  AK  E A     +M    +  D   YS +I+ F K+         
Sbjct: 492 PDYLTYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVECL 551

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    +  D  +YS LI+   ++ +  +A + F  +  +G+      YN++I ++ K
Sbjct: 552 FREMATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVTKAGLCESSTIYNSLIKLYTK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EA    + ++      +  + + +++LY ++    EA  +F  +    C  + + 
Sbjct: 612 AGYLAEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIFESLKASGCANEFSH 671

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             +M+ +Y ++    +A R+   M+ +G+   V+SYN+++++Y       EA+ +F+ M 
Sbjct: 672 -AMMVCLYKKVARYDEAHRISKEMQALGLLTQVLSYNSVIQMYISCGKTEEAVKIFQNML 730

Query: 257 RKEIEQNVVTYNTM 270
                 N  T+  +
Sbjct: 731 ASSTPPNDATFKAL 744


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 233/523 (44%), Gaps = 5/523 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF YNVV+  + + K+ + A  LFDEM  R +AP+R TY+TLI  + K G  + A +
Sbjct: 214 SPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M+ + V   ++ +++L+    +     +A  +   ++  G VPD   Y T+ +   
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      +  L EE   +GV+    + S LLN   +     +A  V  +  E        
Sbjct: 334 KCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV 393

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +++ Y Q+     A      M  +G+ P+ V+YN+L++ + E +   EA    + M
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  NV TYNT+I  YG+S   ++   +++EM+ +G++PN I+Y  +I    K   +
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI- 374
             A ++   +   GV  +  +Y  +I      G +  A R   E+     +P      I 
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNIL 573

Query: 375 ---LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
              L + G++ EA  +  +    G   D+  +  +I  +S        +E++E M+ +G 
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P  +    ++   GK       + +Y EM +   V    ++  ++  Y    D     S
Sbjct: 634 KPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           L   +++      K  ++ +   + +  R++    ++N M  R
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIR 735



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 219/488 (44%), Gaps = 40/488 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  +N +L  + RA+  E A  + +EM   G  PDR+TY+TL     K G  D++I+ 
Sbjct: 285 PTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITL 344

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++  +  V       S L+    K  +  KA  +  +   +G+ P  V +NT++N + +
Sbjct: 345 SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQ 404

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A   IE+M   G++P+ V+Y++L+  + E     EA     +M E     ++ T
Sbjct: 405 VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVET 464

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG------EAE-LFGEAI 249
            N +ID YG+  +     ++   M K G+ P+V+SY  L+          EAE + G+ +
Sbjct: 465 YNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMV 524

Query: 250 H----------------------------LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           H                             F  M  +EI   +VTYN +I    K  +  
Sbjct: 525 HRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVM 584

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A NL  E+  +G+  + ITY+++I+ +  AG + +A  L++ ++ SG++     Y  +I
Sbjct: 585 EAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLI 644

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEV 397
               + GLV   +++  E+ Q N +P       L       G +++A  +       G  
Sbjct: 645 AGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQ 703

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D   + C+I    +  +   V  +   M+  G  P +    +++  + KL++F+ A   
Sbjct: 704 PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVW 763

Query: 458 YSEMQEEG 465
           Y EM E G
Sbjct: 764 YREMFENG 771



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 181/376 (48%), Gaps = 7/376 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN +++     K  E A     +M ++G+ P+  TY+TLI  +G+  +FD     
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME+  +  +++ Y  LI    K ++  +A  I   +   G+VP+   YN +I+    
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCI 544

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   K+A    +EM  + + P  V+Y+ L+N   +  K +EA ++ +E+       D+ T
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVIT 604

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG-EAELFGEAIHLFRLM 255
            N +I  Y      + A  L+ +M+K GI P++ +Y+ L+   G E  +  E I  ++ M
Sbjct: 605 YNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI--YQEM 662

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  +  + V YN +I  Y +  + +KA +L   M+ +GI+P+ +TY+ +I    K G++
Sbjct: 663 LQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRM 722

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV----GLVAHAKRLLHELRQPNTIPRETA 371
            +   L   ++  G+      Y  +IV + ++    G     + +      P+    +  
Sbjct: 723 HKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNL 782

Query: 372 ITILARAGRIEEATWV 387
           IT L   GR  +A  +
Sbjct: 783 ITGLREEGRSHDADVI 798



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/538 (21%), Positives = 220/538 (40%), Gaps = 75/538 (13%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV + N+ L +++  K++E    LF E+ + G+ PD++                     
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQF--------------------- 183

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                         +Y   I+ A KL D  +AI + + +K  G+ P +  YN +I    K
Sbjct: 184 --------------MYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCK 229

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K  K+A  L +EM ++ V P+ ++Y+TL++ Y +  +  EA ++   M   N    + T
Sbjct: 230 EKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIIT 289

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +++   +  M ++A R+   M   G  P   +Y TL   + +      +I L     
Sbjct: 290 FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAV 349

Query: 257 RKEI----------------EQNV-------------------VTYNTMIKIYGKSLEHE 281
           RK +                E N+                   V +NT++  Y +  +  
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA   +++M+  G+ PN +TY++++  + +   ++ A    +K+   GV  +   Y T+I
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y R  L     ++L E+     +PN I     I  L +   I EA  +       G V
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +  ++  +I+      K  +    F++M +    P      +++N   K  +   A++L
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVAGI 514
            SE+  +G  F    +  ++S Y +  +      L+E +  S         H ++AG 
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC 647



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/397 (21%), Positives = 186/397 (46%), Gaps = 9/397 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P    +N ++    +      A+   ++M   G+ P+  TY++L+  F +    +
Sbjct: 385 ENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNME 444

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +++M +  V  ++  Y+ LI+   +   + +   I   ++  G+ P++++Y  +I
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   K     EA +++ +M  +GV P+   Y+ L++      K  +A   F EM      
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L T NI+I+   +     +A+ L   + + G+   V++YN+L+  Y  A    +A+ L
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALEL 624

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKS--LEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
           +  M++  I+  + TY+ +I   GK   +  EK   + QEM    + P+ + Y+ +I  +
Sbjct: 625 YETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK---IYQEMLQMNLVPDRVIYNALIHCY 681

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            + G + +A  L   + + G++ D + Y  +I+ + + G +   K L+++++    IP+ 
Sbjct: 682 VEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741

Query: 370 TAITIL----ARAGRIEEATWVFRQAFDAGEVKDISV 402
               IL     +    + A   +R+ F+ G    +S+
Sbjct: 742 ETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSI 778



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/449 (18%), Positives = 191/449 (42%), Gaps = 44/449 (9%)

Query: 91  LYSN-LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           L+S+ L+ +  +    S++  ++  +K  G++P + + N  +      K +++   L  E
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           + E G++PD   Y   +   V+      A+ +   M        +   N++I    +   
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            KDA++LF  M    + P+ ++YNTL+  Y +     EA ++   M+ + +E  ++T+N+
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST------------------------- 304
           ++    ++   E+A  +++EM+  G  P+  TY+T                         
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 305 ----------IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
                     ++    K G +++A  + +K   +G+    V + T++  Y +VG +  A 
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
             + ++     +PN +   + +        +EEA    ++  + G + ++  +  +I+ +
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R+  +    ++ E+M   G  P+      ++N   K      A+ +  +M   G V + 
Sbjct: 473 GRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNA 532

Query: 471 QVHFQML---SLYGARKD-FNMLESLFER 495
           Q++  ++    + G  KD F   + +  R
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAR 561



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 37/329 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   IL+ + E+    P+V +Y  ++  + +      A  +  +M  RG+ P+   Y+ L
Sbjct: 480 RCFQILEEM-EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNML 538

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A  +  +M    +   LV Y+ LI    K     +A ++ S +   G+
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             D++ YN++I+ +  A   ++A  L E M++ G+KP        LN Y   H+ +    
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT-------LNTY---HRLIAGC- 647

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                                   G+  +    ++++  M +M + P  V YN L+  Y 
Sbjct: 648 ------------------------GKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYV 682

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E     +A  L   M+ + I+ + +TYN +I  + K     K  NL+ +M+ RG+ P   
Sbjct: 683 EHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTE 742

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           TY  +I    K    D A + ++++  +G
Sbjct: 743 TYDILIVGHCKLKDFDGAYVWYREMFENG 771



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 11/213 (5%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN ++     A   + A  L++ M++ GI P   TY  LI   GKEG+      + Q
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIY-Q 660

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M Q  +  D V+Y+ LI    +  D  KA S+ S +++ GI PD + YN +I   G   
Sbjct: 661 EMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI--LGH-- 716

Query: 139 LFKEARL-----LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            FKE R+     L+ +M+ +G+ P T +Y  L+  + +   F  A   + EM E      
Sbjct: 717 -FKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           ++ C+ +I    +   + DAD +   M   G D
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMKGKD 808



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/385 (20%), Positives = 151/385 (39%), Gaps = 43/385 (11%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-------RVYGEAE 243
           P+     ++++ +  +  M  ++  L+  M+K G+ PSV S N  L       R     +
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 244 LFGE----------------------------AIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF E                            AI L   M+R  +   V  YN +I    
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K    + A  L  EM +R + PN ITY+T+I  + K G+L+ A  + ++++   VE   +
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQA 391
            + +++    R  ++  A+R+L E+     +P     T L     + G ++ +  +  +A
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 392 FDAGEVKDISVFGCMIEL--FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
              G    I  + C I L    +        EV +K    G  P       ++N Y ++ 
Sbjct: 349 VRKG--VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVG 406

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
           +   A     +M+  G   +   +  ++  +   K+    E   +++     +   E ++
Sbjct: 407 DINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYN 466

Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
            +   Y R+   +   +I+  M K+
Sbjct: 467 TLIDGYGRSCLFDRCFQILEEMEKK 491


>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
 gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
          Length = 1443

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 214/459 (46%), Gaps = 50/459 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++   +W+      +P+  A  VVL  + RA+Q  +A  +F  +R  G       ++ +
Sbjct: 172 RALDAFEWLARST--APASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAM 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  + + G FD A   L  M  DR                                  GI
Sbjct: 228 MGVYARSGRFDDARQLLDTM-HDR----------------------------------GI 252

Query: 121 VPDLVAYNTMINVFGKAKLFKE--ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            PDLV++NT+IN   K+       A  L+ E+R+ G++PD ++Y+TL++   ++    +A
Sbjct: 253 DPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDA 312

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           ++VF EM    C  DL T N M+ V+G+   A++A+RLF  + + G  P  V+YN+LL  
Sbjct: 313 VTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYA 372

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +     +  H    + +   ++N +TYNTMI +YGK    + A  L  EM+  G  P+
Sbjct: 373 FAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPD 432

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR--- 355
           A+TY+ +I   GK  K+  A  + + +  +G++   V +  +I AY + G  A A++   
Sbjct: 433 AVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFD 492

Query: 356 -LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            ++    +P+ +     + + AR+G  E+   ++R   +     D  ++  ++   ++  
Sbjct: 493 CMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKED 552

Query: 415 KYANVIEVFEKMR-----SAGYFPDSHIIALVLNSYGKL 448
           K   + E+ + M      S G      I A  ++  GKL
Sbjct: 553 KCEEIEEIIQDMELLCQMSLGVISTILIKARCVSQGGKL 591



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 174/367 (47%), Gaps = 6/367 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---AISWLQ 78
            +N ++     +  +E A  +FD M + G  P   + + ++     +G  D     +  LQ
Sbjct: 783  WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQ 842

Query: 79   QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
             M+  ++S   VL   +++   K  D  + + I++ +K++G +P++  Y +M ++     
Sbjct: 843  DMDF-KISKSTVLL--MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899

Query: 139  LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             F++  L+I EM   G KPD   +++LLN+Y     F     V+  + E     D  T N
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYN 959

Query: 199  IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +I +Y +    ++   L   M K G+ P + SY +LL    +AEL  +A  LF  M+ K
Sbjct: 960  TLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSK 1019

Query: 259  EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
              + N   Y+ M+KIY  +  H KA NL+  M+  GIEP   T   ++  +G AG+   A
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEA 1079

Query: 319  AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
              +   L+SS +E+  + Y T+  AY + G      + L E+++    P     T   RA
Sbjct: 1080 ENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRA 1139

Query: 379  GRIEEAT 385
              + E T
Sbjct: 1140 ASLCEQT 1146



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 144/608 (23%), Positives = 253/608 (41%), Gaps = 99/608 (16%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A +  +   YN ++    +  + +LA GL+DEMR  G  PD  TY+ +I   GK     
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIA 450

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA----- 126
            A   L+ M    +   LV +S LI    K    + A   F  + +SG+ PD +A     
Sbjct: 451 EAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVML 510

Query: 127 ---------------YNTMIN--------------------------------------- 132
                          Y TM+N                                       
Sbjct: 511 DVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQM 570

Query: 133 -------VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                  +  KA+   +   L+++   QG KPD  S  +++N YV   K  E LS+   +
Sbjct: 571 SLGVISTILIKARCVSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECI 630

Query: 186 -NEVNCPLDLTT-CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS--YNTLLRVYGE 241
            + V+   DL + C+I++    Q  ++       +S R M   P      Y  L+    E
Sbjct: 631 RDHVSSSQDLISECSIILLCRKQTSISAYEQ---YSQRLMLKYPGQNCNLYEHLITCLVE 687

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           AELF EA  +F  MQ   IE +   Y ++I  Y K    E A  LM +    GI  N ++
Sbjct: 688 AELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILS 747

Query: 302 YSTII-AIWGKAGKLDRAAMLFQKLR-SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
              II   +G      +A +L + LR +SG  ID  ++  +I AY   GL   A+ +   
Sbjct: 748 CRVIIIEAYGNIKLWQQAEILVKGLRQASG--IDRRIWNALIHAYAESGLYEKARAVFDN 805

Query: 360 LRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDI------SVFGCMIEL 409
           + +   +P   ++  + RA    GR++E   V       GE++D+      S    M++ 
Sbjct: 806 MIKTGPLPTVDSVNGMMRALIVDGRLDELYVV------VGELQDMDFKISKSTVLLMLDA 859

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHI---IALVLNSYGKLREFETADDLYSEMQEEGC 466
           F++      V++++  M++AGY P+ H+   +  +L  + + R+ E    + +EM+  G 
Sbjct: 860 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVEL---MIAEMEGAGF 916

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
                +   +L++Y A  +F+    +++ +        ++ ++ +  +Y R+ R  +   
Sbjct: 917 KPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFT 976

Query: 527 IMNRMNKR 534
           ++N M KR
Sbjct: 977 LLNEMGKR 984



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 6/340 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF--GEAIHLFRLM 255
           N M+ VY +     DA +L  +M   GIDP +VS+NTL+    ++     G A+ L   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  +  +V+TYNT+I    +S   E A  + +EM      P+  TY+ ++++ G+ GK 
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           + A  LF +L   G   D V Y +++ A+ + G V   +    EL +     N I   T 
Sbjct: 345 EEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTM 404

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + GR++ A  ++ +    G   D   +  MI+   +  K A   +V E M  AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGL 464

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P     + ++ +Y K      A+  +  M   G       +  ML ++    +   +  
Sbjct: 465 KPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLR 524

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L+  + +D+     +++ V+     + ++  +   I+  M
Sbjct: 525 LYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM 564



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 8/273 (2%)

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           +++ V G+      A+ +F  +R  G   +V  +N ++ VY  +  F +A  L   M  +
Sbjct: 193 VVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDR 250

Query: 259 EIEQNVVTYNTMIKIYGKS--LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            I+ ++V++NT+I    KS  L    A +L+ E++  G+ P+ ITY+T+I+   ++  L+
Sbjct: 251 GIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLE 310

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +F+++ +S    D   Y  M+  + R G    A+RL  EL +    P+ +   + +
Sbjct: 311 DAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLL 370

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              A+ G +++      +   AG  K+   +  MI ++ +  +    + ++++MR+ G  
Sbjct: 371 YAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCT 430

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           PD+    ++++S GK+ +   A  +  +M + G
Sbjct: 431 PDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAG 463



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 141/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P+ + Y ++ +       F      + +ME      DL ++++L+ +  
Sbjct: 872  IYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYT 931

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               ++ +   ++  +  +G+ PD   YNT+I ++ ++   +E   L+ EM ++G+ P   
Sbjct: 932  AAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQ 991

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            SY +LL    +     +A  +F EM   +  L+ +  ++M+ +Y        A+ L   M
Sbjct: 992  SYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG A    EA ++   ++   +E + + Y+T+   Y K+ ++
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDY 1111

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +     + EM+  G+EP+   ++  I       +   A +L + L+  G ++
Sbjct: 1112 DLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDL 1163



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 9/222 (4%)

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA--- 319
            V  +N M+ +Y +S   + A  L+  M +RGI+P+ ++++T+I    K+G L       
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITIL 375
           +LF+ +R SG+  D + Y T+I A  +   +  A  +  E+     +P+       +++ 
Sbjct: 280 LLFE-VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVH 338

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            R G+ EEA  +F +  + G + D   +  ++  F++      V    E++  AG+  + 
Sbjct: 339 GRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNE 398

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
                +++ YGK+   + A  LY EM+  GC   D V + ++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCT-PDAVTYTVM 439



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 111/559 (19%), Positives = 216/559 (38%), Gaps = 48/559 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY V+L    R+ + E    L+  M      PD   Y  L+    KE   +     
Sbjct: 501  PDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEI 560

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +Q ME       L + S ++  AR +S   K   +  +    G  PD  +  +++N +  
Sbjct: 561  IQDMEL-LCQMSLGVISTILIKARCVSQGGK---LLKKACLQGYKPDAKSLWSIMNAYVM 616

Query: 137  AKLFKEARLLIEEMREQ-GVKPDTVS---------------------------------- 161
             +  +E   L+E +R+      D +S                                  
Sbjct: 617  TEKHEEGLSLLECIRDHVSSSQDLISECSIILLCRKQTSISAYEQYSQRLMLKYPGQNCN 676

Query: 162  -YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
             Y  L+   VE   F EA  VF +M  +           +I  Y +L   + A  L    
Sbjct: 677  LYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDA 736

Query: 221  RKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSL 278
             + GI  +++S   ++   YG  +L+ +A  L + L Q   I++ +  +N +I  Y +S 
Sbjct: 737  LQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGIDRRI--WNALIHAYAESG 794

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +EKA  +   M   G  P   + + ++      G+LD   ++  +L+    +I      
Sbjct: 795  LYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVL 854

Query: 339  TMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDA 394
             M+ A+ + G V    ++ + ++    +P      +  ++L    R  +   +  +   A
Sbjct: 855  LMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGA 914

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            G   D+S+F  ++ +++    +    +V++ +  AG  PD      ++  Y +    E  
Sbjct: 915  GFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEG 974

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
              L +EM + G     Q +  +L+     +     + LFE + S S    + ++H++  I
Sbjct: 975  FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKI 1034

Query: 515  YERANRLNDASRIMNRMNK 533
            Y  A   + A  ++  M +
Sbjct: 1035 YRNAGNHSKAENLLAVMKE 1053



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/449 (20%), Positives = 190/449 (42%), Gaps = 41/449 (9%)

Query: 57   YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
            Y  LITC  +  +F  A      M+   +     +Y ++I    KL     A  +     
Sbjct: 678  YEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDAL 737

Query: 117  SSGIVPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
             SGI  ++++   +I   +G  KL+++A +L++ +R Q    D   ++ L++ Y E+  +
Sbjct: 738  QSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLR-QASGIDRRIWNALIHAYAESGLY 796

Query: 176  VEALSVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
             +A +VF  M +      + + N M+    V G+LD   +   +   ++ M    S  + 
Sbjct: 797  EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLD---ELYVVVGELQDMDFKISKSTV 853

Query: 233  NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
              +L  + +A    E + ++  M+      N+  Y +M  +            ++ EM+ 
Sbjct: 854  LLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEG 913

Query: 293  RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
             G +P+   +++++ ++  AG  DR   ++Q +  +G+E D   Y T+IV Y R      
Sbjct: 914  AGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEE 973

Query: 353  AKRLLHELRQPNTIPR-ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
               LL+E+ +    P+ ++  ++LA + + E      R+  D                  
Sbjct: 974  GFTLLNEMGKRGLTPKLQSYKSLLAASAKAE-----LREQAD------------------ 1010

Query: 412  RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
                     ++FE+MRS  Y  +  I  +++  Y        A++L + M+E+G   +  
Sbjct: 1011 ---------QLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIA 1061

Query: 472  VHFQMLSLYGARKDFNMLESLFERLDSDS 500
                +++ YG     +  E++   L S S
Sbjct: 1062 TMHILMTSYGTAGQPHEAENVLNSLKSSS 1090



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/284 (19%), Positives = 123/284 (43%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y  +   +    ++     +  EM   G  PD   +++L+  +   G FD 
Sbjct: 879  AGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDR 938

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                 Q + +  +  D   Y+ LI +  +     +  ++ + +   G+ P L +Y +++ 
Sbjct: 939  TTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLA 998

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               KA+L ++A  L EEMR +  + +   Y  ++ +Y       +A ++ A M E     
Sbjct: 999  ASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP 1058

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + T +I++  YG      +A+ +  S++   ++ S + Y+T+   Y +   +   I   
Sbjct: 1059 TIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKL 1118

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+R  +E +   +   I+      +   A  L++ +Q+ G +
Sbjct: 1119 LEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            EA   P    YN ++    R+ + E    L +EM +RG+ P   +Y +L+    K  + +
Sbjct: 948  EAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    ++M       +  +Y  ++++ R   ++SKA ++ + +K  GI P +   + ++
Sbjct: 1008 QADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILM 1067

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              +G A    EA  ++  ++   ++  T+ YST+ + Y++N  +   +    EM      
Sbjct: 1068 TSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVE 1127

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             D       I      +   DA  L  S++  G D
Sbjct: 1128 PDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 6/249 (2%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A + P +  +N +L     A  ++    ++  + + G+ PD  TY+TLI  + +    
Sbjct: 912  EGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRP 971

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   + L +M +  ++  L  Y +L+  + K     +A  +F  ++S     +   Y+ M
Sbjct: 972  EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMM 1031

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            + ++  A    +A  L+  M+E G++P   +   L+  Y    +  EA +V   +   + 
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSL 1091

Query: 191  PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             +     + + D Y   G  D+     +    M++ G++P    +   +R     E   +
Sbjct: 1092 EVSTLPYSTVFDAYLKNGDYDLGI---KKLLEMKRDGVEPDHQVWTCFIRAASLCEQTAD 1148

Query: 248  AIHLFRLMQ 256
            AI L + +Q
Sbjct: 1149 AILLLKSLQ 1157


>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Brachypodium distachyon]
          Length = 753

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 194/398 (48%), Gaps = 20/398 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P     N+++  + R  Q   A  + ++MR  G +P+  T++TLI C   + M+D AI++
Sbjct: 359 PDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITF 418

Query: 77  LQQMEQDRVSGDLVLYSN--LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  EQ R+     + +N  L++L  K     +A+ +   L   G  PD+V YN +I+  
Sbjct: 419 WK--EQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISAS 476

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA   K+A+ ++  +  +G++P++ +Y  LL+      ++ E   + A M   NC  D+
Sbjct: 477 CKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDV 536

Query: 195 TTCNIMIDV---YGQLDMAKDADRLFWSMRKMGID---PSVVSYNTLLRVYGEAELFGEA 248
           T  NI I+    YG LD A D       + KM  D   P +V+YNTLL    +  +  EA
Sbjct: 537 TAYNIFINYFCKYGHLDQAIDV------LEKMVSDKCCPDIVTYNTLLNAISKEGMVEEA 590

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + +   +++   +  ++TYNT+I       E +KA  L  EM +  I P+ ITY +++  
Sbjct: 591 LVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMG 650

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPN 364
           + K    + A  L  +  + G ++    +  +I A  R G V  A  +L     E    N
Sbjct: 651 FCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTN 710

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           +    + +  +A++GRIEEA  + ++  D   +K  S+
Sbjct: 711 SSFYLSIVRRVAKSGRIEEAERLHQELIDCKILKKDSL 748



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 179/428 (41%), Gaps = 4/428 (0%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           A  + DEM   G  PD      LI    K G  + A   L+ M       D +  + LI 
Sbjct: 310 ACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIA 369

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              +    S A+S+   ++ SG  P+ + +NT+I       ++ +A    +E    G  P
Sbjct: 370 QLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPP 429

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
             ++ + L++L  +      A+ V  E++   C  D+ T N +I    + D  KDA  + 
Sbjct: 430 YVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTIL 489

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             +   G++P+  +Y  LL        + E   L   M+R   E +V  YN  I  + K 
Sbjct: 490 TRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKY 549

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++A +++++M +    P+ +TY+T++    K G ++ A ++   +R +G ++  + Y
Sbjct: 550 GHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITY 609

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I A    G V  A  L  E+      P+ I   + +    +    EEA  +  +   
Sbjct: 610 NTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLA 669

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G     + F  +I+   R+ K     E+   M S     +S     ++    K    E 
Sbjct: 670 LGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEE 729

Query: 454 ADDLYSEM 461
           A+ L+ E+
Sbjct: 730 AERLHQEL 737



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/397 (19%), Positives = 156/397 (39%), Gaps = 39/397 (9%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY---- 162
           +A  +   +   G +PD      +I    K     +AR ++E M   G  PDT++     
Sbjct: 309 QACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLI 368

Query: 163 -------------------------------STLLNLYVENHKFVEALSVFAEMNEVNCP 191
                                          +TL+      H + +A++ + E   +  P
Sbjct: 369 AQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWP 428

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             + T  +++D+  +   +K A  +   +   G  P VV+YN L+    +A+   +A  +
Sbjct: 429 PYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTI 488

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              +  + +E N  TY  ++          +  +L+  M+    EP+   Y+  I  + K
Sbjct: 489 LTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCK 548

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN----TIP 367
            G LD+A  + +K+ S     D V Y T++ A  + G+V  A  + H +RQ       I 
Sbjct: 549 YGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLIT 608

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  LA  G +++A  +F +        D   +G ++  F +       +E+  +  
Sbjct: 609 YNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTL 668

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           + G+   +    +V+ +  +  + E A ++   M  E
Sbjct: 669 ALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSE 705


>gi|15237467|ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46580, chloroplastic; Flags: Precursor
 gi|8885599|dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008017|gb|AED95400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 711

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 208/438 (47%), Gaps = 2/438 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++    +W+  ++ +      YNV ++++   +Q++L   +  EM + G+  D  TYST+
Sbjct: 168 KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           ITC  +  +++ AI W ++M +  +  D V YS ++++  K     + +S++ R  ++G 
Sbjct: 228 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 287

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD +A++ +  +FG+A  +   R +++EM+   VKP+ V Y+TLL       K   A S
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F EM E     +  T   ++ +YG+   A+DA +L+  M+        + YNTLL +  
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407

Query: 241 EAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           +  L  EA  LF  M+   +   +  +Y  M+ IYG   + EKA  L +EM   G++ N 
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +  + ++   GKA ++D    +F      GV+ D  L   ++           A++++  
Sbjct: 468 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 527

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF-GCMIELFSRNKKYAN 418
           L + N         I+      E     F+   +A +V+    F  C+I++   N ++  
Sbjct: 528 LERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHER 587

Query: 419 VIEVFEKMRSAGYFPDSH 436
             E+       G +P  H
Sbjct: 588 AHELLYLGTLFGLYPGLH 605



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 183/375 (48%), Gaps = 6/375 (1%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N + +   L ++ K  + F+ +KS  + P + + YN  +      + F+    +  EM +
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            GV+ D ++YST++      + + +A+  F  M +     D  T + ++DVY +    ++
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              L+      G  P  ++++ L +++GEA  +    ++ + M+  +++ NVV YNT+++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             G++ +   A +L  EM   G+ PN  T + ++ I+GKA     A  L++++++    +
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPM 394

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D +LY T++     +GL   A+RL +++++     P+       + I    G+ E+A  +
Sbjct: 395 DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +   AG   ++    C+++   + K+  +V+ VF+     G  PD  +   +L+    
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMAL 514

Query: 448 LREFETADDLYSEMQ 462
               E A+ + + ++
Sbjct: 515 CESSEDAEKVMACLE 529



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 11/254 (4%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M K G++   ++Y+T++       L+ +AI  F  M +  +  + VTY+ ++ +Y KS +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            E+  +L +     G +P+AI +S +  ++G+AG  D    + Q+++S  V+ + V+Y T
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE--- 396
           ++ A  R G    A+ L +E+ +    P E  +T L +     +A W  R A    E   
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI--YGKARWA-RDALQLWEEMK 388

Query: 397 ----VKDISVFGCMIELFSRNKKYANVIEVFEKMR-SAGYFPDSHIIALVLNSYGKLREF 451
                 D  ++  ++ + +          +F  M+ S    PD+     +LN YG   + 
Sbjct: 389 AKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKA 448

Query: 452 ETADDLYSEMQEEG 465
           E A +L+ EM + G
Sbjct: 449 EKAMELFEEMLKAG 462



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 4/157 (2%)

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEA 384
           GVE+D + Y T+I   +R  L   A      + +   +P E      + + +++G++EE 
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             ++ +A   G   D   F  + ++F     Y  +  V ++M+S    P+  +   +L +
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            G+  +   A  L++EM E G   +++    ++ +YG
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 213/491 (43%), Gaps = 39/491 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V +Y+ ++    +  + + A+ LFDEM  +G  PD  TYS+LI    K    + A +
Sbjct: 200 SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEA 259

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ M    V  +   Y+ +I     L    +A+ +  ++  SG+ PD+V Y  +I  + 
Sbjct: 260 ILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYC 319

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     EAR + + M  +G KP++  Y  LL+ Y      ++   +   M     P +  
Sbjct: 320 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 379

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+I  Y +      A   F  MR+ G+ P VVSY+T++ +  +     +A++ F  M
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI--------------- 300
             + +  N++++ ++I       E +K   L  EM NRGI P+AI               
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499

Query: 301 --------------------TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                               +Y+T+I  +   GK+D +   F ++ S G+  D   Y  +
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNAL 559

Query: 341 IVAYERVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +  Y + G V  A  L  E+ + +     I     +  L +AGRI  A  ++ +  D G 
Sbjct: 560 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGT 619

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
              I  +  ++     N      + +FE +RS  +  D     +V+N+  K+   + A  
Sbjct: 620 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKS 679

Query: 457 LYSEMQEEGCV 467
           L+S M   G V
Sbjct: 680 LFSAMVLRGPV 690



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 198/457 (43%), Gaps = 42/457 (9%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEG 68
           E  Y+P VF+YN +++ +   K+ + A  L   M   G    +P+  +YST+I  F KEG
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEG 217

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A     +M       D+V YS+LI+   K    +KA +I   +   G++P+   YN
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYN 277

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MI  +      +EA  L+++M   G++PD V+Y  L+  Y +  +  EA SVF      
Sbjct: 278 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD----- 332

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                                         SM + G  P+   Y+ LL  Y       + 
Sbjct: 333 ------------------------------SMVRKGQKPNSTIYHILLHGYATKGALIDV 362

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L  LM R  I      +N +I  Y K    +KA     EM+  G+ P+ ++YST+I I
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI 422

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
             K G+++ A   F ++ S G+  + + + ++I     +G     + L  E+      P+
Sbjct: 423 LCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 482

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I   T +  L + GR+ EA   F      G   ++  +  +I+ +    K    I+ F+
Sbjct: 483 AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFD 542

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +M S G  PDS     +LN Y K    E A  LY EM
Sbjct: 543 RMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREM 579



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 178/368 (48%), Gaps = 1/368 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+++L              L D M + GI  +   ++ LI  + K G  D A++ 
Sbjct: 341 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 400

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q+ +  D+V YS +I +  K+     A+  F+++ S G+ P+++++ ++I+    
Sbjct: 401 FTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 460

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K+   L  EM  +G+ PD +  +T+++   +  + VEA   F  +  +    ++ +
Sbjct: 461 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS 520

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID Y  +    ++ + F  M  +G+ P   +YN LL  Y +     +A+ L+R M 
Sbjct: 521 YNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF 580

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK+++   +T N ++    ++     A  L  +M +RG +    TY+T++    +   +D
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 640

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  +F+ LRS   E+D   +  +I A  +VG +  AK L   +     +P     +++ 
Sbjct: 641 EALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI 700

Query: 377 RAGRIEEA 384
           ++ RIEE 
Sbjct: 701 KS-RIEEG 707



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 207/513 (40%), Gaps = 95/513 (18%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWE-------LAHGLFDEMRQRGI---A 51
           ++ + D +  +AR   SV A+N VL  V RA           LA  LF+ M + G+   A
Sbjct: 33  ALNLFDELLPQAR-PASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMA 91

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS- 110
            +RY    LI CF   G  D A +      +    G  V    L +L + L D  +    
Sbjct: 92  ANRYIIGILIRCFCTVGRLDLAFAAFALFLK---MGWRVQNVTLNQLIKGLCDGKRTDDA 148

Query: 111 ---IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG---VKPDTVSYST 164
              +F R+   G  PD+ +YN +I      K  +EA  L+  M   G     P+ VSYST
Sbjct: 149 MDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYST 208

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++ + +  +  +A  +F EM                   GQ                 G
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEM------------------IGQ-----------------G 233

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P VV+Y++L+    +A+   +A  + + M  K +  N  TYN MI+ Y    + E+A 
Sbjct: 234 FPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV 293

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ------ 338
            L+++M   G++P+ +TY  +I  + K G+   A  +F  +   G + +  +Y       
Sbjct: 294 RLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 353

Query: 339 -----------------------------TMIVAYERVGLVAHAKRLLHELRQ----PNT 365
                                         +I AY + G V  A     E+RQ    P+ 
Sbjct: 354 ATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 413

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T I IL + GR+E+A + F Q    G   +I  F  +I       ++  V E+  +
Sbjct: 414 VSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           M + G  PD+  +  ++++  K      A D +
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 506



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 35/379 (9%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           A+N+++    +    + A   F EMRQ G+ PD  +YST+I    K G  + A+    QM
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSK--------------------------------- 107
             + +S +++ +++LI     + ++ K                                 
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499

Query: 108 --AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
             A   F  +   G+ P++V+YNT+I+ +       E+    + M   G++PD+ +Y+ L
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNAL 559

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           LN Y +N +  +AL+++ EM   +      T NI++    Q      A  L+  M   G 
Sbjct: 560 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGT 619

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
              + +YNT+L    E     EA+ +F  ++ KE E +V T+N +I    K    ++A +
Sbjct: 620 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKS 679

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L   M  RG  P+ ITYS +I    + G L+ +  LF  +  +G   D  +   +I    
Sbjct: 680 LFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLL 739

Query: 346 RVGLVAHAKRLLHELRQPN 364
             G V  A   L ++ + N
Sbjct: 740 EKGDVRRAGTYLTKIDEKN 758



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 35/328 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++ ++  ++  +    +W+    L  EM  RGI PD    +T++    KEG    A  
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 504

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +   +    V  ++V Y+ LI+    +    ++I  F R+ S G+ PD   YN ++N + 
Sbjct: 505 FFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564

Query: 136 K-------AKLFKE----------------------------ARLLIEEMREQGVKPDTV 160
           K         L++E                            AR L  +M ++G +    
Sbjct: 565 KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIE 624

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+T+L    EN    EAL +F ++      LD+ T NI+I+   ++    +A  LF +M
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G  P V++Y+ +++   E  L  E+  LF  M++     +    N +I+   +  + 
Sbjct: 685 VLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDV 744

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +A   + ++  +     A T + +I I
Sbjct: 745 RRAGTYLTKIDEKNFSVEASTAALLIPI 772



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 35/266 (13%)

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHL-FRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           KMG     V+ N L++   + +   +A+ + FR M       +V +YN +IK      + 
Sbjct: 122 KMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 181

Query: 281 EKATNLMQEMQNRG---IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           ++A  L+  M   G     PN ++YSTII  + K G++D+A  LF ++   G   D V Y
Sbjct: 182 QEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTY 241

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
            ++I                                 L +A  + +A  + +  FD G +
Sbjct: 242 SSLIDG-------------------------------LCKAQAMNKAEAILQHMFDKGVM 270

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +   +  MI  +    +    + + +KM  +G  PD     L++  Y K+     A  +
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGAR 483
           +  M  +G   +  ++  +L  Y  +
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATK 356



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 83/184 (45%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N++L  + +A +   A  L+ +M  RG      TY+T++    +    D A+   + +  
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D+  ++ +I    K+    +A S+FS +   G VP ++ Y+ MI    +  L +E
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEE 711

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           +  L   M + G   D+   + ++   +E      A +   +++E N  ++ +T  ++I 
Sbjct: 712 SDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIP 771

Query: 203 VYGQ 206
           +  +
Sbjct: 772 IVSE 775



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 60/131 (45%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V+ +N+V+  +L+  + + A  LF  M  RG  P   TYS +I    +EG+ + +     
Sbjct: 658 VWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFL 717

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            ME++  + D  + + +I    +  D  +A +  +++       +      +I +  + K
Sbjct: 718 SMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEKK 777

Query: 139 LFKEARLLIEE 149
             KE + L E+
Sbjct: 778 YQKEVKFLPEK 788


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 218/485 (44%), Gaps = 31/485 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN +++ +  A Q +L   +  EM + G   DR+T         KEG +  A 
Sbjct: 205 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA- 263

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L  +E++    D VL +++I    + S + +A+S   R++ +  +P++V Y T+++ F
Sbjct: 264 --LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 321

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K     + +I  M  +G  P+   +++L++ Y     +  A  +   M    CP   
Sbjct: 322 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381

Query: 195 TTCNIMI-DVYGQ-----LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI I  + GQ      D+   A++++  M       + V+     R       F +A
Sbjct: 382 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             L + M RK    +  TY+ +I     + + EKA  L QEM+  G+ P+  TY+ +I  
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 501

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPN 364
           + KAG +++A  LF+++RS G     V Y  +I AY +   V  A  + H +     +PN
Sbjct: 502 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 561

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKD----------------ISVFGCMIE 408
            +     +  L +AG I +A  V+ +     +  D                +  +G +++
Sbjct: 562 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 621

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  K  +  E+ + M S+G  P+  +   +++ + K  + ++A +++ +M +  C +
Sbjct: 622 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK--CGY 679

Query: 469 SDQVH 473
              VH
Sbjct: 680 LPSVH 684



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 163/381 (42%), Gaps = 22/381 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQW------ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P    YN+ + ++   ++       +LA  ++ EM       ++   +    C    G F
Sbjct: 379 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 438

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   +++M +     D   YS +I      +   KA  +F  +K  G+ PD+  Y  +
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 498

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F KA L ++A+ L EEMR  G  P  V+Y+ L++ Y++  +  +A  +F  M +  C
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558

Query: 191 PLDLTTCNIMID-------------VYGQL---DMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +  T   ++D             VY +L     + D+D  F    +  + P+VV+Y  
Sbjct: 559 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 618

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+    +A     A  L   M     E N + Y+ +I  + K+ + + A  +  +M   G
Sbjct: 619 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 678

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
             P+  TY+++I    K G+LD A  +  ++       + V Y  MI    R+G    A 
Sbjct: 679 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 738

Query: 355 RLLHELRQPNTIPRETAITIL 375
           +LL  + +    P     T L
Sbjct: 739 KLLSLMEEKGCSPNVVTYTAL 759



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 202/487 (41%), Gaps = 27/487 (5%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD I  E     +V   +++   ++ A  ++ A      MR     P+  TY TL++ F 
Sbjct: 264 LDMIEREDFKLDTVLCTHMI-SGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 322

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K+         +  M  +  + +  L+++L+       DY+ A  + +R+ + G  P  V
Sbjct: 323 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 382

Query: 126 AYNTMI-NVFGKAKL-----FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            YN  I ++ G+ KL        A  +  EM       + V+ +          KF +A 
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM       D +T + +I         + A  LF  M+ +G+ P V +Y  L+  +
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +A L  +A  LF  M+       VVTY  +I  Y K+ +  +A ++   M + G  PN 
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP----------------VLYQTMIVA 343
           +TY  ++    KAG + +A  ++ KL  +    D                 V Y  ++  
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622

Query: 344 YERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
             +   V HA  LL  +     +PN I  +  I    +AG+I+ A  VF Q    G +  
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  +I+   ++ +    ++V  +M      P+      +++   ++ E E A  L S
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742

Query: 460 EMQEEGC 466
            M+E+GC
Sbjct: 743 LMEEKGC 749



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 18/315 (5%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + E A  LF EM+  G+ PD YTY+ LI  F K G+ + A 
Sbjct: 453 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 512

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M     S  +V Y+ LI    K     +A  IF R+  +G  P+ V Y  +++  
Sbjct: 513 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 572

Query: 135 GKA----KLFKEARLLIEEMRE------------QGVKPDTVSYSTLLNLYVENHKFVEA 178
            KA    K F+    LI                   + P+ V+Y  L++   + HK   A
Sbjct: 573 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 632

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M    C  +    + +ID + +      A  +F  M K G  PSV +Y +L+ R
Sbjct: 633 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 692

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M +     NVVTY  MI    +  E EKA  L+  M+ +G  P
Sbjct: 693 MFKDGRL-DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 751

Query: 298 NAITYSTIIAIWGKA 312
           N +TY+ +I   G++
Sbjct: 752 NVVTYTALIDGLGQS 766



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 19/254 (7%)

Query: 8   WINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           W+ EE R    SP+V  Y  ++   L+AKQ   A+ +F  M   G  P+  TY  L+   
Sbjct: 513 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 572

Query: 65  GKEGMF--------------DSAISWLQQMEQDR--VSGDLVLYSNLIELARKLSDYSKA 108
            K G                DSA S      +DR  ++ ++V Y  L++   K      A
Sbjct: 573 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 632

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
             +   + SSG  P+ + Y+ +I+ F KA     A+ +  +M + G  P   +Y++L++ 
Sbjct: 633 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 692

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++ +   A+ V ++M + +C  ++ T   MID   ++  ++ A +L   M + G  P+
Sbjct: 693 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 752

Query: 229 VVSYNTLLRVYGEA 242
           VV+Y  L+   G++
Sbjct: 753 VVTYTALIDGLGQS 766



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/316 (18%), Positives = 119/316 (37%), Gaps = 44/316 (13%)

Query: 198 NIMIDVYGQL-DMAKDADRLF-WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           ++++ V G + D  +   R F W+ R++G   +   Y+ L    G      +A  L R +
Sbjct: 106 SVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREI 165

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             ++ E      N +++   +     +A   +  +++ G  P+ +TY+ ++ +   AG++
Sbjct: 166 GEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQV 225

Query: 316 DRAAMLFQKLRSSG--------------------------------VEIDPVLYQTMIVA 343
           D    + +++  SG                                 ++D VL   MI  
Sbjct: 226 DLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISG 285

Query: 344 YERVGLVAHAKRLLHELRQPNTIPR-ETAITILARAGRIEEATWVFR---QAFDAGEVKD 399
                    A   LH +R  + IP   T  T+L+   + ++  W  R        G   +
Sbjct: 286 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 345

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD---- 455
            S+F  ++  +   K YA   ++  +M + G  P   +  + + S     +  + D    
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 405

Query: 456 --DLYSEMQEEGCVFS 469
              +Y EM    CV +
Sbjct: 406 AEKIYGEMLAANCVLN 421


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 220/497 (44%), Gaps = 39/497 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R++P +  +N +L ++ + KQ+  A  L  +M  +GI  +  T + LI CF   G    
Sbjct: 4   VRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAF 63

Query: 73  AISWLQQMEQ------------------------------DRVSG-----DLVLYSNLIE 97
           + S L ++ +                              D+V       D V Y  L+ 
Sbjct: 64  SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
              K+ +   A+ +   ++     P++V YNT+I+   K KL  EA  L  EM  +G+ P
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D ++Y+TL+  +    + + A S+  EM   N    +   NI+I+   +    K+A  L 
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M K GI P VV+Y+TL+  Y        A  +F  M +  +  NV +YN MI    K 
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              ++A NL++EM ++ + P+ +TY+++I    K+G++  A  L  ++   G   D V Y
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            +++ A  +   +  A  L  +++    QP        I  L + GR++ A  +F+    
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 423

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+  +  MI    +   +   + +  KM   G  P++    +++ S  +  E + 
Sbjct: 424 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 483

Query: 454 ADDLYSEMQEEGCVFSD 470
           A+ L  EM  +G +  D
Sbjct: 484 AEKLLHEMIAKGLLVLD 500



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 4/344 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    Y  ++       Q   A  L DEM  + I P  Y Y+ LI    KEG    A + 
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +   +V YS L++    + +   A  IF  +   G+ P++ +YN MIN   K
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K   EA  L+ EM  + + PDTV+Y++L++   ++ +   AL++  EM+    P D+ T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++D   +      A  LF  M++ GI P++ +Y  L+    +      A  LF+ + 
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K    +V TY  MI    K    ++A  +  +M++ G  PNA+T+  II    +  + D
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +A  L  ++ + G+ +       + V  E       A++LLHE+
Sbjct: 483 KAEKLLHEMIAKGLLVLDFKVADVFVQNEN----DKAEKLLHEM 522



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 55/111 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P+++ Y  ++  + +  + + A  LF  +  +G   D +TY+ +I+   KEGMF
Sbjct: 387 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 446

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           D A++   +ME +    + V +  +I    +  +  KA  +   + + G++
Sbjct: 447 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497


>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Vitis vinifera]
 gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 190/365 (52%), Gaps = 2/365 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + + + E+  Y P+   Y  ++  + + KQ E AH LF  M   G   +   Y+ L+
Sbjct: 121 ALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALL 180

Query: 62  TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + + + G+FD A S L++M+       D+  YS LI+   ++  + K   + S + + GI
Sbjct: 181 SAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGI 240

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P+ V YNT+I+ +GKAK F E    L+E +RE   +PD  + ++ L  +  + +     
Sbjct: 241 KPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETME 300

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + +        ++ T NI++D YG+ +  +    +   M+K     ++V+YN ++  +
Sbjct: 301 KCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAF 360

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    +  +LFRLM+ + I+ + VT  ++++ YG++ + EK   +++ ++N  +  + 
Sbjct: 361 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDI 420

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + ++ ++  +G+ G       + + ++  G + D + Y+TMI AY+  G+ + AK L   
Sbjct: 421 VFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGL 480

Query: 360 LRQPN 364
           +R P+
Sbjct: 481 MRMPD 485



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 162/330 (49%), Gaps = 6/330 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+   Y  +I + GK K  ++A  L   M ++G   +  +Y+ LL+ Y  +  F +A S+
Sbjct: 136 PNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSL 195

Query: 182 FAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
             +M N  +C  D+ T +++I    Q+        L   M   GI P+ V+YNTL+  YG
Sbjct: 196 LEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYG 255

Query: 241 EAELFGEA-IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           +A+ F E    L  +++  + E +V T N+ ++ +G S + E      ++ Q+ GIEPN 
Sbjct: 256 KAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNI 315

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            T++ ++  +GKA K ++ + + + ++        V Y  +I A+ R G +   + L   
Sbjct: 316 KTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 375

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +R    +P+ +   + +    RAG+ E+   V R   ++  + DI  F C+++ + R   
Sbjct: 376 MRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGC 435

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
           +A +  V E M+  G  PD      ++ +Y
Sbjct: 436 FAEMKGVLEMMKKKGCKPDKITYRTMIKAY 465



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 35/325 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++ ++L+ +       P V  Y+V++++ L+   ++    L  +M  +GI P+  TY+TL
Sbjct: 191 KAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTL 250

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +GK   F        +ME           S L+E+                L+    
Sbjct: 251 IDAYGKAKRF-------AEME-----------STLLEM----------------LREGKC 276

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+   N+ +  FG +   +      E+ +  G++P+  +++ LL+ Y +  K+ +  +
Sbjct: 277 EPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSA 336

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V   M + +    + T N++ID +G+    K  + LF  MR   I PS V+  +L+R YG
Sbjct: 337 VMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 396

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            A    +   + R ++  ++  ++V +N ++  YG+     +   +++ M+ +G +P+ I
Sbjct: 397 RAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKI 456

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY T+I  + K G +   A   Q L
Sbjct: 457 TYRTMIKAY-KIGGMTSCAKELQGL 480



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 123/262 (46%), Gaps = 13/262 (4%)

Query: 248 AIHLFRLMQRKEI--EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           A+ +F L+ R+++    N   Y  +I + GK  + EKA  L   M + G   N   Y+ +
Sbjct: 121 ALKVFELL-REQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTAL 179

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSG-VEIDPVLYQTMI------VAYERVGLVAHAKRLLH 358
           ++ + ++G  D+A  L +K++++   + D   Y  +I      VA+++V ++     + +
Sbjct: 180 LSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSD--MAN 237

Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYA 417
           +  +PNT+   T I    +A R  E      +    G+ + D+      +  F  + +  
Sbjct: 238 QGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIE 297

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            + + +EK +SAG  P+     ++L+SYGK  ++E    +   MQ+    ++   +  ++
Sbjct: 298 TMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVI 357

Query: 478 SLYGARKDFNMLESLFERLDSD 499
             +G   D   +E LF  + S+
Sbjct: 358 DAFGRAGDLKQMEYLFRLMRSE 379


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 9/365 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG----M 69
           R SP ++ +N V+  + R  Q   A  +  +++  G+AP   TY++LI  + K+G    M
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +   +  L++M +  +S   V +  LI    K S+ + A+ +F  +K  GI   +V YN+
Sbjct: 246 YHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+        +E   L+EEM + G+ P+ +++  +L  + +     +A      M E N
Sbjct: 305 LISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   NI+IDVY +L   +DA  +  +M K GI P+V +YN L+  +  +  +  A 
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+ K IE +VVTYN +I       E  KA  L+ EM   G+EPN +TY+TII  +
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
              G +  A  +  ++       + V Y   I  + ++G +  A  LL+E+      PN 
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544

Query: 366 IPRET 370
           I  ET
Sbjct: 545 ITYET 549



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 151/294 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  SP+   + V++    +      A  +F+EM+Q+GIA    TY++LI+    EG  +
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  +++ME   +S + + +  +++   K    + A      +    + PD+V YN +I
Sbjct: 317 EGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILI 376

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +V+ +    ++A  + E M ++G+ P+  +Y+ L+  +  +  +  A  +  EM E    
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N++I         + A +L   M ++G++P+ ++YNT+++ + +      A  +
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
              M++     NVVTYN  IK + +  + ++A +L+ EM ++ + PN ITY TI
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 142/316 (44%), Gaps = 7/316 (2%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD-- 212
           V PD  +++T+++      +  +A  V  ++        + T N +ID Y +   A +  
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246

Query: 213 -ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             D L   M + GI P+ V++  L+  Y +      A+ +F  M+++ I  +VVTYN++I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
                  + E+   LM+EM++ G+ PN IT+  ++  + K G +  A      +    VE
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            D V+Y  +I  Y R+G +  A  +   + +    PN       IT  +R+G    A+ +
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +  + G   D+  +  +I       +    +++ ++M   G  P+      ++  +  
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486

Query: 448 LREFETADDLYSEMQE 463
               ++A ++ + M++
Sbjct: 487 KGNIKSAYEIRTRMEK 502



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 7/246 (2%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PS  S N LL     A+    A   FR   R+ +  ++ T+NT+I    +  +  KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 287 MQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            ++++  G+ P+  TY+++I  +   G AG +    ML +++  +G+    V +  +I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y +    A A R+  E++Q     + +   + I+ L   G++EE   +  +  D G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              FGC+++ F +    A+  +  + M      PD  I  ++++ Y +L + E A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 460 EMQEEG 465
            M ++G
Sbjct: 394 AMAKKG 399


>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 196/390 (50%), Gaps = 27/390 (6%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK--------AKLFKEARLLIEEMREQGV 155
           DY+  +        SG+ P+LV YN +I+  GK        A++F E  L   EM  +G+
Sbjct: 150 DYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLF-SEMLYRGI 208

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           + D  +Y+TLL+   +  +   A  + +EM   +   ++ T + +ID Y +     +A  
Sbjct: 209 EQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 268

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF  M+   I    VSYNTLL +Y +   F EA+++ + M+   I+++ VTYN ++  YG
Sbjct: 269 LFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYG 328

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K  ++E+   + +EM+   I PN +TYST+I ++ K G    A  +F++ + +G++ D V
Sbjct: 329 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 388

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
           LY  +I A  + GLV  A   L E+ +    PN +   + I    R+G +E+AT    + 
Sbjct: 389 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATE--SEV 446

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYAN--------VIEVFEKMRSAGYFPDSHIIALVLN 443
            D  + + I +FG +    + + K  N        ++ VF KM      P+    + +LN
Sbjct: 447 GDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILN 506

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           +  +   FE A  L  E++    +F +QV+
Sbjct: 507 ACSRCNSFEDASMLLEELR----LFDNQVY 532



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 169/358 (47%), Gaps = 48/358 (13%)

Query: 17  PSVFAYNVVLR-------NVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           P++  YN V+        +  RA +      LF EM  RGI  D +TY+TL+    K G 
Sbjct: 168 PNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQ 227

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A   + +M +  +  ++V YS +I+   K     +A+++F+ +K + I  D V+YNT
Sbjct: 228 MDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNT 287

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++++ K   F+EA  + +EM   G+K D V+Y+ LL  Y +  K+ E   VF EM    
Sbjct: 288 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 347

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +L T + +IDVY +  + ++A  +F   +K G+   VV Y+ L+    +  L   A+
Sbjct: 348 IFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAV 407

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT-----------------------NL 286
                M ++ I  NVVTYN++I  +G+S   E AT                         
Sbjct: 408 SFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKTC 467

Query: 287 MQEMQNRG------------------IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
             + +NRG                  I+PN +T+S I+    +    + A+ML ++LR
Sbjct: 468 HAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELR 525



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 18/263 (6%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +L    +  ++E    +F+EM+   I P+  TYSTLI  + K G++  A+   ++ +
Sbjct: 320 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFK 379

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+VLYS LI+   K      A+S    +   GI P++V YN++I+ FG++ + +
Sbjct: 380 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVE 439

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVEN-----------HKFVEALSVFAEMNEVNC 190
           +A        E G K D         L  E             + +  L+VF +M+E++ 
Sbjct: 440 DA-----TESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDI 494

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T + +++   + +  +DA  L   +R        V++  LL  YG+  ++ +A  
Sbjct: 495 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGYGD-NVWVQAQS 552

Query: 251 LFRLMQRKEIEQNVVTYNTMIKI 273
           LF  +++ +       YN +  +
Sbjct: 553 LFDEVKQMDSSTASAFYNALTDM 575



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 51/265 (19%)

Query: 284 TNLMQEMQNRG---IEPNAITYSTIIAIWGKAG-KLDRAA------MLFQKLRSSGVEID 333
           T L++E+ NRG   ++PN +TY+ +I   GK G   +RAA       LF ++   G+E D
Sbjct: 152 TFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQD 211

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
              Y T++ A  + G +  A +++ E+ +    PN +   T I   A+AGR++EA     
Sbjct: 212 IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA----- 266

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                                         + +F +M+ A    D      +L+ Y KL 
Sbjct: 267 ------------------------------LNLFNEMKFASIGLDRVSYNTLLSIYAKLG 296

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELH 508
            FE A ++  EM+  G +  D V +  +L  YG +  +  ++ +FE + ++        +
Sbjct: 297 RFEEALNVCKEMESSG-IKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTY 355

Query: 509 HVVAGIYERANRLNDASRIMNRMNK 533
             +  +Y +     +A  +     K
Sbjct: 356 STLIDVYSKGGLYQEAMEVFREFKK 380


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 209/420 (49%), Gaps = 4/420 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  PS+  ++ +L  + + K++E    LF  +   GI+ D Y++STLI CF +     
Sbjct: 66  ESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLS 125

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S L +M +      +V + +L+     ++   +A+S+  ++   G  P++V YNT+I
Sbjct: 126 LALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTII 185

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   + +    A  ++  M + G++PD ++Y++L+     + K+  +  + ++M  +   
Sbjct: 186 DSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIH 245

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T + MIDV+G+     +A + +  M +  +DP++V+YN+L+       L  EA  +
Sbjct: 246 PDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKV 305

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K    N VTYNT++  Y KS   + A  ++  M + G++ +  TY+T+   + +
Sbjct: 306 LNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQ 365

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IP 367
           AG+ + A  +  ++ S GV  D   +  ++      G +  A   L +L++  T    I 
Sbjct: 366 AGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIIT 425

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  + +A ++E+A ++F      G   D+  +  M+    R + +    E++ KM+
Sbjct: 426 YNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 211/446 (47%), Gaps = 10/446 (2%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LR+ L + ++  A  LF +M +    P    +S L+    K   +++ IS  + +E   +
Sbjct: 45  LRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGI 104

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           S DL  +S LI+   + S  S A+S   ++   G  P +V + +++N F      +EA  
Sbjct: 105 SHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMS 164

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L++++   G +P+ V Y+T+++   EN +   AL V   M ++    D+ T N +I    
Sbjct: 165 LVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLF 224

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                  + R+   M +MGI P V++++ ++ V+G+     EA   +  M ++ ++ N+V
Sbjct: 225 HSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIV 284

Query: 266 TYNTMIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           TYN++I    I+G   E +K  N    M ++G  PNA+TY+T++  + K+ ++D A  + 
Sbjct: 285 TYNSLINGLCIHGLLDEAKKVLNF---MVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARA 378
             +   GV+ D   Y T+   Y + G    A+++L  +     +P      +    L   
Sbjct: 342 CVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G+IE+A         +  V  I  +  +I+   +  K  +   +F  +   G  PD    
Sbjct: 402 GKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461

Query: 439 ALVLNSYGKLREFETADDLYSEMQEE 464
             ++    + R +  A +LY +M+++
Sbjct: 462 TTMMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 47/322 (14%)

Query: 6   LDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           LD +N  E+    P V  YN ++  +  + +W ++  +  +M + GI PD  T+S +I  
Sbjct: 198 LDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDV 257

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIV 121
           FGKEG    A     +M Q  V  ++V Y++LI       L D +K +  F  + S G  
Sbjct: 258 FGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNF--MVSKGFF 315

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ V YNT++N + K+K   +A  ++  M   GV  DT +Y+TL   Y +  +F  A  V
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKV 375

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            A M  V+C                                 G+ P + ++N LL    E
Sbjct: 376 LARM--VSC---------------------------------GVLPDIYTFNMLLDGLCE 400

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                +A+     +Q+ E    ++TYN +IK   K+ + E A  L   +  +G+ P+ IT
Sbjct: 401 HGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVIT 460

Query: 302 YSTIIA------IWGKAGKLDR 317
           Y+T++       +W +A +L R
Sbjct: 461 YTTMMIGLRRKRLWLEAHELYR 482



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 41/364 (11%)

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           F +A  L  +M E    P  V +S LL    +  K+   +S+F  +  +    DL + + 
Sbjct: 54  FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID + +      A      M K+G +PS+V++ +L+  +       EA+ L   +    
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG 173

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            E NVV YNT+I    ++ + + A +++  M+  GI P+ ITY+++I     +GK   +A
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSA 233

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            +   +   G+  D + +  MI  + + G +  AK+   E+ Q    PN +   + I  L
Sbjct: 234 RILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGL 293

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              G ++EA                                    +V   M S G+FP++
Sbjct: 294 CIHGLLDEAK-----------------------------------KVLNFMVSKGFFPNA 318

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFE 494
                ++N Y K +  + A  +   M  +G V  D   +  L   Y     FN  E +  
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDG-VDGDTFTYNTLYQGYCQAGQFNAAEKVLA 377

Query: 495 RLDS 498
           R+ S
Sbjct: 378 RMVS 381


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 18/379 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
           P   + N+++  + R  Q   A  + ++MR  G +P   T++TLI C   + M+D AIS 
Sbjct: 284 PDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISF 343

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           W +Q+       ++   + L++L  K     KA+ +   L   G  PD+V YN +I+   
Sbjct: 344 WKEQLRLGWPPYEMT-STLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC 402

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA    +A+ ++  +  +G++P+  +Y  LL+      ++ E   +  +MN+VN   D+T
Sbjct: 403 KAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVT 462

Query: 196 TCNIMIDV---YGQLDMAKDADRLFWSMRKMGID---PSVVSYNTLLRVYGEAELFGEAI 249
           T NI I+    YG LD A D       + +M I+   P +V+ NTLL    +  +  EA+
Sbjct: 463 TYNIFINYFCKYGHLDQAIDV------LERMVINNCSPDIVTCNTLLNAISKKGMVEEAL 516

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            + R ++    +  ++TYNT+I    K  E +KA  L  EM + GI P+ ITY +++  +
Sbjct: 517 GIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGF 576

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR- 368
            K    D A  L  ++ + G E+    +  +I A  R G V  A  +   +   N+IP  
Sbjct: 577 CKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGN 636

Query: 369 ---ETAITILARAGRIEEA 384
               + +T +A++G  +EA
Sbjct: 637 SLCSSIVTKVAKSGWNKEA 655



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/384 (20%), Positives = 149/384 (38%), Gaps = 40/384 (10%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  +   +   G +P+      +I    K     +AR ++E M   G  PDT+S + L+
Sbjct: 234 QACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI 293

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                  +   AL V  +                                   MR  G  
Sbjct: 294 AQLCRGGQLSSALQVLED-----------------------------------MRFSGCS 318

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PS +++NTL+R      ++  AI  ++   R       +T   ++ +  K+   +KA  +
Sbjct: 319 PSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEV 378

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
           + E+   G +P+ +TY+ +I+   KAG+L+ A  +  +L + G+E +   Y  ++ A   
Sbjct: 379 LDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCN 438

Query: 347 VGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           +        LL ++ Q N  P  T     I    + G +++A  V  +        DI  
Sbjct: 439 MRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVT 498

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
              ++   S+       + +   +R  GY         ++++  K  E + A  L+ EM 
Sbjct: 499 CNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEML 558

Query: 463 EEGCVFSDQVHFQMLSLYGARKDF 486
            +G +  D + +  L +   +KD 
Sbjct: 559 SDG-ISPDDITYGSLVMGFCKKDM 581



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y   +  YN ++  + +  + + A  LFDEM   GI+PD  TY +L+  F K+ M D
Sbjct: 524 ENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMAD 583

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L QM           +  +I+   +      A  I   + S   +P     ++++
Sbjct: 584 EALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIV 643

Query: 132 NVFGKAKLFKEARLLIEEMRE 152
               K+   KEA++L +++ E
Sbjct: 644 TKVAKSGWNKEAQMLHQKLVE 664


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 12/382 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
           P   + N+++  + R  Q   A  + ++MR  G +P   T++TLI C   + M+D AIS 
Sbjct: 205 PDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISF 264

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           W +Q+       ++   + L++L  K     KA+ +   L   G  PD+V YN +I+   
Sbjct: 265 WKEQLRLGWPPYEMT-STLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC 323

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA    +A+ ++  +  +G++P+  +Y  LL+      ++ E   +  +MN+VN   D+T
Sbjct: 324 KAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVT 383

Query: 196 TCNIMIDV---YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T NI I+    YG LD A D   +   M      P +V+ NTLL    +  +  EA+ + 
Sbjct: 384 TYNIFINYFCKYGHLDQAID---VLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIA 440

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R ++    +  ++TYNT+I    K  E +KA  L  EM + GI P+ ITY +++  + K 
Sbjct: 441 RCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKK 500

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR---- 368
              D A  L  ++ + G E+    +  +I A  R G V  A  +   +   N+IP     
Sbjct: 501 DMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLC 560

Query: 369 ETAITILARAGRIEEATWVFRQ 390
            + +T +A++G  +EA  + ++
Sbjct: 561 SSIVTKVAKSGWNKEAQMLHQK 582



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/384 (20%), Positives = 149/384 (38%), Gaps = 40/384 (10%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  +   +   G +P+      +I    K     +AR ++E M   G  PDT+S + L+
Sbjct: 155 QACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI 214

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                  +   AL V  +                                   MR  G  
Sbjct: 215 AQLCRGGQLSSALQVLED-----------------------------------MRFSGCS 239

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PS +++NTL+R      ++  AI  ++   R       +T   ++ +  K+   +KA  +
Sbjct: 240 PSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEV 299

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
           + E+   G +P+ +TY+ +I+   KAG+L+ A  +  +L + G+E +   Y  ++ A   
Sbjct: 300 LDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCN 359

Query: 347 VGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           +        LL ++ Q N  P  T     I    + G +++A  V  +        DI  
Sbjct: 360 MRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVT 419

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
              ++   S+       + +   +R  GY         ++++  K  E + A  L+ EM 
Sbjct: 420 CNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEML 479

Query: 463 EEGCVFSDQVHFQMLSLYGARKDF 486
            +G +  D + +  L +   +KD 
Sbjct: 480 SDG-ISPDDITYGSLVMGFCKKDM 502



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y   +  YN ++  + +  + + A  LFDEM   GI+PD  TY +L+  F K+ M D
Sbjct: 445 ENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMAD 504

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L QM           +  +I+   +      A  I   + S   +P     ++++
Sbjct: 505 EALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIV 564

Query: 132 NVFGKAKLFKEARLLIEEMRE 152
               K+   KEA++L +++ E
Sbjct: 565 TKVAKSGWNKEAQMLHQKLVE 585


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 9/365 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG----M 69
           R SP ++ +N V+  + R  Q   A  +  +++  G+AP   TY++LI  + K+G    M
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +   +  L++M +  +S   V +  LI    K S+ + A+ +F  +K  GI   +V YN+
Sbjct: 246 YHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+        +E   L+EEM + G+ P+ +++  +L  + +     +A      M E N
Sbjct: 305 LISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   NI+IDVY +L   +DA  +  +M K GI P+V +YN L+  +  +  +  A 
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+ K IE +VVTYN +I       E  KA  L+ EM   G+EPN +TY+TII  +
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
              G +  A  +  ++       + V Y   I  + ++G +  A  LL+E+      PN 
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544

Query: 366 IPRET 370
           I  ET
Sbjct: 545 ITYET 549



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 151/294 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  SP+   + V++    +      A  +F+EM+Q+GIA    TY++LI+    EG  +
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  +++ME   +S + + +  +++   K    + A      +    + PD+V YN +I
Sbjct: 317 EGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILI 376

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +V+ +    ++A  + E M ++G+ P+  +Y+ L+  +  +  +  A  +  EM E    
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N++I         + A +L   M ++G++P+ ++YNT+++ + +      A  +
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
              M++     NVVTYN  IK + +  + ++A +L+ EM ++ + PN ITY TI
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/348 (19%), Positives = 148/348 (42%), Gaps = 36/348 (10%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + PD+  +NT+I+   +    ++A  + ++++  G+ P   +Y++L++ Y +        
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK------- 239

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
                                    G        D L   M + GI P+ V++  L+  Y
Sbjct: 240 -------------------------GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +      A+ +F  M+++ I  +VVTYN++I       + E+   LM+EM++ G+ PN 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           IT+  ++  + K G +  A      +    VE D V+Y  +I  Y R+G +  A  +   
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 360 LRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           + +    PN       IT  +R+G    A+ +  +  + G   D+  +  +I       +
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
               +++ ++M   G  P+      ++  +      ++A ++ + M++
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 7/246 (2%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PS  S N LL     A+    A   FR   R+ +  ++ T+NT+I    +  +  KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 287 MQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            ++++  G+ P+  TY+++I  +   G AG +    ML +++  +G+    V +  +I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y +    A A R+  E++Q     + +   + I+ L   G++EE   +  +  D G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              FGC+++ F +    A+  +  + M      PD  I  ++++ Y +L + E A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 460 EMQEEG 465
            M ++G
Sbjct: 394 AMAKKG 399


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 201/456 (44%), Gaps = 9/456 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    YN  +  + +      A  + D M Q G  PD +TY+T+I C
Sbjct: 285 LGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 344

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K G  D A   + QM       D   ++ LI      +   +A+ +   L   G+ PD
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K         L EEM+  G  PD V+Y+ L++      K V AL +  
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM    CP    T N +ID   +    ++A+ +F  M   GI  S V++NTL+    +A+
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M ++ ++ + +TYN+++  Y K  + +KA ++++ M   G E + +TY 
Sbjct: 525 RIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYG 584

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KAG+   A  L + +R  G+   P  Y  +I +  R   +  A  L  E+ + 
Sbjct: 585 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV 644

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
              P      I+ R      G I+EA     +  + G + + S F  + E          
Sbjct: 645 GEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDY 704

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           +I   E +     F +S + A  +  Y K+R++  A
Sbjct: 705 LISAIELIIEKAKFRESDVSA--IRGYLKIRKYYDA 738



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 209/475 (44%), Gaps = 45/475 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +L+ ++  A  +P    +  +++  +     E A  +  +M + G +P R T + LI
Sbjct: 214 AVLMLEEMSSHA-VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + K G  + A+ ++Q+   D    D V Y+  +    +    S A+ +   +   G  
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS- 180
           PD+  YNT+IN   K     EA+ ++ +M ++G  PDT +++TL+      ++  EAL  
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392

Query: 181 ----------------------------------VFAEMNEVNCPLDLTTCNIMIDVYGQ 206
                                             +F EM    C  D  T NI+ID    
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           +    +A  L   M   G   S V+YNT++    +     EA  +F  M    I ++ VT
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +NT+I    K+   + AT L+++M   G++P+ ITY++I+  + K G L +AA + + + 
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIE 382
           ++G EID V Y T+I    + G    A +LL  +R     P   A    I  L R   + 
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE---KMRSAGYFPD 434
           +A  +FR+  + GE  D   +  +     R      + E F+   +M + G+ P+
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGLCRGG--GPIKEAFDFLVEMVNKGFMPE 685



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 202/453 (44%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   N +++ + RA Q   A  + +EM    +APD  T++TL+  F +EG  ++A+  
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +   S   V  + LI    K+     A+    +  + G  PD V YNT ++   +
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  +++ M ++G  PD  +Y+T++N   +N +  EA  +  +M +  C  D TT
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I      +  ++A  L   +   G+ P V ++N L+    +       I LF  M+
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + VTYN +I       +   A +L++EM++ G   + +TY+TII    K  +++
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
            A  +F ++ + G+    V + T+I    +   +  A  L+ ++     QP+ I   + +
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           T   + G +++A  +       G   D+  +G +I    +  +    +++   MR  G  
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P       V+ S  +      A  L+ EM E G
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ ++D + +E  + P VF YN V+  + +  + + A G+ ++M  RG  PD  T++TLI
Sbjct: 319 ALKVMDLMLQEG-HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 377

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                +   + A+   +++    +S D+  ++ LI    K+ D    I +F  +KSSG  
Sbjct: 378 VALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCA 437

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD V YN +I+          A  L++EM   G    TV+Y+T+++   +  +  EA  V
Sbjct: 438 PDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEV 497

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M+         T N +ID   +     DA  L   M K G+ PS ++YN++L  Y +
Sbjct: 498 FDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK 557

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                +A  +   M     E +VVTY T+I    K+   + A  L++ M+ +GI P    
Sbjct: 558 QGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 617

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER-VGLVAHAKRLLHEL 360
           Y+ +I    +   L  A  LF+++   G   D + Y+ +     R  G +  A   L E+
Sbjct: 618 YNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEM 677

Query: 361 RQPNTIPRETAITILARA 378
                +P  ++  +LA  
Sbjct: 678 VNKGFMPEFSSFRMLAEG 695



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 194/449 (43%), Gaps = 41/449 (9%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +L  +    + +L   +++EM  RGI PD  T +TLI    +     +A+  L++M 
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              V+ D   ++ L++   +      A+ + +++  +G  P  V  N +IN + K    +
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A   I++    G +PD V+Y+T ++   +N     AL V          +DL       
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKV----------MDL------- 325

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
                             M + G DP V +YNT++    +     EA  +   M  +   
Sbjct: 326 ------------------MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 367

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  T+NT+I         E+A +L +E+  +G+ P+  T++ +I    K G       L
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-----ITILA 376
           F++++SSG   D V Y  +I     +G + +A  LL E+ + N  PR T      I  L 
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM-ESNGCPRSTVTYNTIIDALC 486

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +  RIEEA  VF Q    G  +    F  +I+   + K+  +  E+ E+M   G  P + 
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
               +L  Y K  + + A D+   M   G
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANG 575



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 208/499 (41%), Gaps = 38/499 (7%)

Query: 51  APDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
           AP R  Y  +I   G  G FD     +++M ++       +  + +E   +L  +  A+ 
Sbjct: 86  APSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVD 145

Query: 111 IF-SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
           +  ++L + G+  D   YN ++NV  +    K    +  EM ++G++PD V+ +TL+   
Sbjct: 146 LVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKAL 205

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
              H+   A+ +  EM+      D TT   ++  + +    + A R+   M + G  P+ 
Sbjct: 206 CRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTR 265

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+ N L+  Y +     +A+   +       E + VTYNT +    ++     A  +M  
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   G +P+  TY+T+I    K G+LD A  +  ++   G   D   + T+IVA      
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA------ 379

Query: 350 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
                                    L    R+EEA  + R+    G   D+  F  +I  
Sbjct: 380 -------------------------LCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
             +       I +FE+M+S+G  PD     ++++    + +   A DL  EM+  GC  S
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMN 529
              +  ++     +      E +F+++D+          + +     +A R++DA+ ++ 
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 530 RMNKRR------TFNSSLV 542
           +M K        T+NS L 
Sbjct: 535 QMVKEGLQPSNITYNSILT 553


>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
          Length = 714

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 220/429 (51%), Gaps = 15/429 (3%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + SP + ++N  L    R   WE    + + M +  I  D +T+STLI+   + G +D A
Sbjct: 150 KVSPDIVSFNTALAACQRQCDWESGVAILEMMSEDQIERDVFTFSTLISLCDRCGKYDEA 209

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELAR-----------KLSDYSKAISIFSRLKSSGIVP 122
            +  ++M+   VS ++  ++ LI + +           + +  + A  +F+  K++G+ P
Sbjct: 210 FALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRP 269

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V YN+++ V+ +   +KE+  ++ E+ +Q V  D ++YSTL++ + +  K+  A+ ++
Sbjct: 270 DIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMY 329

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            +M E     ++ T N +I    + +    A   F  M+  GI P+VV+Y+T++      
Sbjct: 330 EKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSK 389

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           + +  A  LF  M RKEI  + +T++ ++ +   S + E+A ++++ MQ+ GI+ N   Y
Sbjct: 390 DNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMY 449

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           S ++ + G+AG+LD A  +  + +  G++ + +++  +I A +    +  A R+L  +++
Sbjct: 450 SAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKE 509

Query: 363 PNTIPRETAITI-LARAGRIEEATWVFRQAF---DAGEVKDISVFGCMIELFSRNKKYAN 418
            +  P      + L     +  +T  F+      + G   ++  F  +I+   R+ ++  
Sbjct: 510 DHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEWQK 569

Query: 419 VIEVFEKMR 427
             EV+ +M+
Sbjct: 570 AFEVYSQMQ 578



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/480 (20%), Positives = 222/480 (46%), Gaps = 33/480 (6%)

Query: 5   ILDWINEEA---RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +L W+ EE+   +   S   +N  +R + R   W  A  + + M + G+ PD  +Y+T++
Sbjct: 69  VLRWMREESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVL 128

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +         +    L++M +++VS D+V ++  +   ++  D+   ++I   +    I 
Sbjct: 129 SALRHSPDIQNVFVMLKRM-REKVSPDIVSFNTALAACQRQCDWESGVAILEMMSEDQIE 187

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+  ++T+I++  +   + EA  L EEM  + V P+  +++ L+ +             
Sbjct: 188 RDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAV------------- 234

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
                   C   L T  +       L +A+    LF   +  G+ P +V+YN+LL VY E
Sbjct: 235 --------CKNSLATSLMSRKRQNTLTIAQ---ILFAEAKAAGLRPDIVTYNSLLGVYME 283

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              + E+  +   ++ + +  +V+TY+T+I  + K+ ++  A  + ++M  R + PN IT
Sbjct: 284 MGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVIT 343

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY-ERVGLVAHAKRLLHEL 360
           Y+++I    +A    +A   F  +++ G+  + V Y TMI +   +   V      L  +
Sbjct: 344 YNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMI 403

Query: 361 RQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           R+   P+ +     +++   + + E+A  V     DAG   +I ++  ++ +  +  +  
Sbjct: 404 RKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLD 463

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   + ++ +  G  P+  +   ++++    R+ + A  +   M+E+  V  + V F +L
Sbjct: 464 DAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKEDH-VTPNLVTFNVL 522



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 200/439 (45%), Gaps = 69/439 (15%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E +  P+V  YN ++   LRA  +  A   FD+M+ +GI+P+  TYST+I     +  + 
Sbjct: 334 ERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWV 393

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A     +M +  +  D + +S L+ + +    + +A+ +   ++ +GI  ++  Y+ ++
Sbjct: 394 TAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVV 453

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +V G+A    +A  +++E +  G+KP+ + ++ L++                        
Sbjct: 454 HVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIH------------------------ 489

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID---PSVVSYNTLLRVYGEAELFGEA 248
                C +          A+D DR F  +  M  D   P++V++N LL   G  E+ G +
Sbjct: 490 ----ACKV----------ARDLDRAFRVLELMKEDHVTPNLVTFNVLL---GTCEVVGNS 532

Query: 249 IHLFR---LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
              F+   L+Q      N+ T+NT+IK   +S E +KA  +  +MQ + I P+  T++ +
Sbjct: 533 TCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNAL 592

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
                + G   RA  +   +R   ++ + +L          + +  H          P+ 
Sbjct: 593 SMAAEEGGDWRRAIDVMVDMR---IKTEKIL----------IRMAGHT---------PSV 630

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               + I+   ++   ++A  V++    +G   +I  +  +I + S  +K + V++V  +
Sbjct: 631 QAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISILSGQRKLSEVLKVINE 690

Query: 426 MRSAGYFPDSHIIALVLNS 444
           M+     PDS  IAL++++
Sbjct: 691 MKQEEVTPDSETIALMIDA 709



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/421 (20%), Positives = 181/421 (42%), Gaps = 33/421 (7%)

Query: 53  DRYTYSTLITCFG---KEGMFDSAISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           D    S LI   G   K+ M    + W+ ++ E+ ++    + ++  I    ++ D+ +A
Sbjct: 46  DEKLVSRLIVEIGRKHKKMMVADVLRWMREESERRKIKLSSLPFNACIRALERMGDWREA 105

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           ++I + ++  G+ PD+V+YNT+++    +   +   ++++ MRE+ V PD VS++T L  
Sbjct: 106 VAILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVFVMLKRMREK-VSPDIVSFNTALAA 164

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
                 +   +++   M+E     D+ T + +I +  +     +A  L   M    + P+
Sbjct: 165 CQRQCDWESGVAILEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPN 224

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           + ++N L+ V   +           LM RK   QN +T                A  L  
Sbjct: 225 IYTFNALIAVCKNSLATS-------LMSRKR--QNTLTI---------------AQILFA 260

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           E +  G+ P+ +TY++++ ++ + GK   +  +  ++    V  D + Y T+I  + +  
Sbjct: 261 EAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTR 320

Query: 349 LVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
             + A    ++++     PN I   + I    RA    +A   F      G   ++  + 
Sbjct: 321 KYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYS 380

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            MI        +    ++F +M      PD    + +L+     +++E A D+   MQ+ 
Sbjct: 381 TMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDA 440

Query: 465 G 465
           G
Sbjct: 441 G 441


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 16/470 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S   ++ ++++     + + A   F  M+++G+ P   T ++L++ F K    ++A    
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M + R+   +  ++ +I +  K     KA      +++SG+ P++V YNT+++ +  +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + A  ++  M+ Q ++PD+ +Y +L++   +  +  EA  +F EM +          
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 198 NIMIDVY---GQLDMA---KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           N +ID +   G LDMA   KD       M K GI P++ +YN+L+      +   EA  +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKD------EMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + +Q K I  + +TYN +I  Y +    +KA  L  EM   GI+P   TY++++ +  K
Sbjct: 384 IKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             ++  A  LF+K+ S GV  D +++  +I  +     V  A  LL ++ +    P E  
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              +     R G++EEA  +F +    G   D   F  +I  +SR     +   V  +M 
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             G+ P       ++    K +E + A++L  EM  +G    D  +F ++
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 173/346 (50%), Gaps = 1/346 (0%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           AIL  +  + +  P  F Y  ++  + +  + E A  +F+EM Q+G+ P    Y+TLI  
Sbjct: 277 AILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F  +G  D A ++  +M +  +S  +  Y++LI          +A  +   ++  GI PD
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
            + YN +IN + +    K+A LL +EM   G+KP   +Y++LL++  + ++  EA  +F 
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           ++       D+   N +ID +      K A  L   M +M + P  V++NT+++ +    
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              EA  LF  M+R+ I+ + +++NT+I  Y +  + + A  +  EM + G  P  +TY+
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
            ++    K  + D A  L +++ S G+  D   Y T+I    +V +
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 188/399 (47%), Gaps = 4/399 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R   SV+ +N+++  + +  + + A      M   G+ P+  TY+T++  +   G  ++A
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M++ ++  D   Y +LI    K     +A  IF  +   G+ P  V YNT+I+ 
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F        A    +EM ++G+ P   +Y++L++      +  EA  +  E+ E     D
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             T NI+I+ Y +   AK A  L   M   GI P+  +Y +LL V  +     EA  LF+
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  + +  +V+ +N +I  +  +   + A  L+++M    + P+ +T++TI+    + G
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
           K++ A  LF +++  G++ D + + T+I  Y R G +  A R+ +E+      P  +   
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
             +  L +    + A  + ++    G   D + +  +IE
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 174/361 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P++  YN ++     + + E A  +   M+++ I PD +TY +LI+   K+G  
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M Q  +    V+Y+ LI+      +   A +    +   GI P +  YN++
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+     +   EA  +I+E++E+G+ PD ++Y+ L+N Y       +A  +  EM     
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T   ++ V  + +  K+AD LF  +   G+ P V+ +N L+  +        A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFE 487

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M R ++  + VT+NT+++ + +  + E+A  L  EM+ RGI+P+ I+++T+I+ + 
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G +  A  +  ++  +G     + Y  ++    +      A+ LL E+      P +T
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDT 607

Query: 371 A 371
            
Sbjct: 608 T 608



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 192/422 (45%), Gaps = 4/422 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++   N +L   L+  + E A  L+ EM +  I    YT++ +I    KEG    A  +
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  ME   V  ++V Y+ ++           A +I + +K   I PD   Y ++I+   K
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  + EEM ++G++P  V Y+TL++ +        A +   EM +      ++T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I          +A+ +   +++ GI P  ++YN L+  Y       +A  L   M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+    TY +++ +  K    ++A +L +++ + G+ P+ I ++ +I        + 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L + +    V  D V + T++  + R G V  A+ L  E++    +P+ I   T I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +  +R G I++A  V  +  D G    +  +  +++   +N++     E+ ++M S G  
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 433 PD 434
           PD
Sbjct: 604 PD 605



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 184/404 (45%), Gaps = 12/404 (2%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           +++  LI+    ++   +A   F  +K  G++P +   N+++++F K    + A +L  E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M    +K    +++ ++N+  +  K  +A      M       ++ T N ++  Y     
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + AD +  +M++  I+P   +Y +L+    +     EA  +F  M +K +  + V YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  +      + A+    EM  +GI P   TY+++I       + D A  + ++++  G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKR--LLH-ELRQPNTIPRETAIT----ILARAGRIE 382
           +  D + Y  +I  Y R    A+AK+  LLH E+      P +   T    +L++  R++
Sbjct: 392 ISPDAITYNILINGYCR---CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  +F++    G + D+ +F  +I+    N       E+ + M      PD      ++
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKD 485
             + +  + E A +L+ EM+  G +  D + F  ++S Y  R D
Sbjct: 509 QGHCREGKVEEARELFDEMKRRG-IKPDHISFNTLISGYSRRGD 551



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++P+V  YN +++ + + ++ +LA  L  EM  +G+ PD  TY TLI    K  + D
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623


>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 203/427 (47%), Gaps = 21/427 (4%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + Y  +L+  LR+++      +++EMR++G   D + Y+ L+    K GM D A    + 
Sbjct: 187 YTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFED 246

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M+Q     D   Y+ LI ++ +    SK +S F  + S G   +L+AYNT+I   GK K+
Sbjct: 247 MKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKM 306

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN---HKFVEALSVFAE-MNEVNCPLDLT 195
             +   ++ +M E G +P+  +YS  L++  +    H+  E L +    MN+       +
Sbjct: 307 VDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNK-------S 359

Query: 196 TCNIMIDVYGQLDMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + ++    +     +A  +F   W+  + G   + VS   +L V   +    EAI L 
Sbjct: 360 IYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVS---MLEVLCNSGKTLEAIDLL 416

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            +M  K +  +V  YN +    GK  +    T+L  +M+  GI P+  TY+ +I+ +G+ 
Sbjct: 417 HMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRV 476

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPR 368
           G +D+A+ LF+ + +S  + D + Y ++I    + G +  A  L  E+++    P+    
Sbjct: 477 GLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTY 536

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I    ++ +++ A  +F      G + ++  +  +++   R+ K A   + +E M+ 
Sbjct: 537 SILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQ 596

Query: 429 AGYFPDS 435
            G  PDS
Sbjct: 597 QGLTPDS 603



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 183/404 (45%), Gaps = 35/404 (8%)

Query: 9   INEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           + EE R   Y   +F YN++L  + ++   + A+ +F++M+Q+   PD YTY+ LI   G
Sbjct: 208 VYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSG 267

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP--- 122
           + G     +S+  +M     + +L+ Y+ LIE   K     K I + S++   G  P   
Sbjct: 268 RAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQF 327

Query: 123 ------DLVA-----------------------YNTMINVFGKAKLFKEARLLIEEMREQ 153
                 D++A                       Y+ ++    K+    EA  +  +M   
Sbjct: 328 TYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHVSEAHNVFCQMWNS 387

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
               D  ++ ++L +   + K +EA+ +   M E     D+   N++    G+L      
Sbjct: 388 YETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFI 447

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M+  GI P + +YN ++  YG   L  +A  LF  M     + +V+TYN++I  
Sbjct: 448 TSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINC 507

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            GK+ + ++A  L +EMQ +G  P+  TYS +I  +GK+ K+D A  LF  + + G   +
Sbjct: 508 LGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPN 567

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            V Y  ++   ER G  A A +    ++Q    P     +IL R
Sbjct: 568 VVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILER 611



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 129/256 (50%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++++ ++     AH +F +M       DR  + +++      G    AI  L  M 
Sbjct: 361 YSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMP 420

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  V+ D+ +Y+ +     KL   S   S+F ++K++GI PDL  YN MI+ +G+  L  
Sbjct: 421 EKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVD 480

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L E+M     KPD ++Y++L+N   +N    EA  +F EM E     D+ T +I+I
Sbjct: 481 KASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILI 540

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +    A  LF  M   G  P+VV+YN LL          EA   +  M+++ + 
Sbjct: 541 ECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLT 600

Query: 262 QNVVTYNTMIKIYGKS 277
            + +T + + ++  +S
Sbjct: 601 PDSITCSILERLESRS 616



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/434 (20%), Positives = 198/434 (45%), Gaps = 10/434 (2%)

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           L R  +D S+A+ I S ++  G+  ++   N ++ + G      +    +E   + G++ 
Sbjct: 128 LFRTRADPSEALRIVSEMERDGVSGNISTVNLLVGIGGGGVEVTKC---LELAMKWGLRL 184

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +  +Y  +L  ++ + +  +   V+ EM      LD+   N+++D   +  M   A ++F
Sbjct: 185 NGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVF 244

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M++   +P   +Y  L+R+ G A    + +  F  M  K    N++ YNT+I+  GK+
Sbjct: 245 EDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKN 304

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +K   ++ +M   G +PN  TYS  + I  K G+L R   L + L      ++  +Y
Sbjct: 305 KMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHR---LNEVLDICDRYMNKSIY 361

Query: 338 QTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETAIT---ILARAGRIEEATWVFRQAFD 393
             ++ +  + G V+ A  +  ++     T  R+  ++   +L  +G+  EA  +     +
Sbjct: 362 SYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPE 421

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+ ++  +     + K+ + +  +F+KM++ G  PD     ++++SYG++   + 
Sbjct: 422 KGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDK 481

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  L+ +M    C      +  +++  G   D +    LF+ +           + ++  
Sbjct: 482 ASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIE 541

Query: 514 IYERANRLNDASRI 527
            + ++N+++ A  +
Sbjct: 542 CFGKSNKVDMACNL 555



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P +F YN+++ +  R    + A GLF++M      PD  TY++LI C GK G  D A  
Sbjct: 460 APDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHM 519

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M++     D+  YS LIE   K +    A ++F  + + G +P++V YN +++   
Sbjct: 520 LFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLE 579

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           +     EA    E M++QG+ PD+++ S L  L   + + V
Sbjct: 580 RHGKTAEAHKHYETMKQQGLTPDSITCSILERLESRSQRTV 620



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 35/396 (8%)

Query: 154 GVKPDTVSYSTLLNLYVENHK-FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           G + D  SY+ +L L         EAL + +EM       +++T N+++ + G       
Sbjct: 113 GFRHDAFSYNRILALLFRTRADPSEALRIVSEMERDGVSGNISTVNLLVGIGGGGVEVTK 172

Query: 213 ADRLF--WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
              L   W +R  G      +Y  +L+ +  +    +   ++  M+RK    ++  YN +
Sbjct: 173 CLELAMKWGLRLNG-----YTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNML 227

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +    KS   ++A  + ++M+ +  EP+A TY+ +I + G+AGK  +    F ++ S G 
Sbjct: 228 LDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGC 287

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATW 386
            ++ + Y T+I A  +  +V     +L ++     QPN       + ILA+ G++     
Sbjct: 288 ALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLN- 346

Query: 387 VFRQAFDAGEVKDI-------SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
                    EV DI       S++  +++  S++   +    VF +M ++    D     
Sbjct: 347 ---------EVLDICDRYMNKSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFV 397

Query: 440 L---VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
               VL + GK  E   A DL   M E+G      ++  + S  G  K  + + SLF+++
Sbjct: 398 SMLEVLCNSGKTLE---AIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKM 454

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
            ++        ++++   Y R   ++ AS +   MN
Sbjct: 455 KANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMN 490


>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
 gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
          Length = 593

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/463 (21%), Positives = 203/463 (43%), Gaps = 24/463 (5%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + + +WI   + + P +  YN+++    + +Q   A  ++  + +    P   TY+ L+ 
Sbjct: 149 ITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLR 208

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            +   G    A   + +M+++ +     +Y+  ++   K     KA+ ++ R+K      
Sbjct: 209 AYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRT 268

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           +   Y  MINV+GKAK    +  +  EM+  G KP+  +Y+ L+N +       +A  VF
Sbjct: 269 NTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVF 328

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
            EM +     D+   N +++ Y +  + + A  +F  M  MG +P   SYN L+  YG A
Sbjct: 329 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRA 388

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
            L  EA   F+ ++++ +   + ++  ++  + KS    +   +M ++   G+ P+    
Sbjct: 389 GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFAL 448

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + ++  +G+AG+LD                     + ++ A ER                
Sbjct: 449 NAMLNAYGRAGRLDD-------------------MERLLGAMERG-----GDDDAGGGAA 484

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P+T      + +  RAG ++     FR     G   D+  +   I  ++R K+Y   +E+
Sbjct: 485 PDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEI 544

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           FE+M  AG +PD+    ++L +    R+ E    +   M ++ 
Sbjct: 545 FEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDA 587



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/403 (22%), Positives = 180/403 (44%), Gaps = 24/403 (5%)

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D     L  M QD           ++E  +K +D +   +I+  L       DL  +
Sbjct: 86  GFVDGVFPVLSPMAQD-----------ILEFVQKGTDVT---NIWESLDKIPQAHDL--W 129

Query: 128 NTMINVFGKAKLFKEARLLIEE----MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           + ++NV  + +L ++   +I      +     +PD + Y+ L++ Y +  +  +A S++ 
Sbjct: 130 DDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYM 189

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            + E +C     T  +++  Y        A+ +   M+K G+ P+   YN  L    +A 
Sbjct: 190 ALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKAR 249

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A+ +++ M+++    N  TY  MI +YGK+ +   +  +  EM+  G +PN  TY+
Sbjct: 250 CSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYT 309

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            ++  + + G  ++A  +F++++ +G E D   Y  ++ AY R GL   A  +   +   
Sbjct: 310 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369

Query: 364 NTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P   +  IL     RAG  +EA   F++    G    +     ++   +++   A  
Sbjct: 370 GCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARC 429

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
            EV  ++  +G  PD+  +  +LN+YG+    +  + L   M+
Sbjct: 430 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAME 472



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 166/393 (42%), Gaps = 11/393 (2%)

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           L  S   PD++ YN +I+ +G+ +   +A  +   + E    P   +Y+ LL  Y  + +
Sbjct: 156 LYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQ 215

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              A  V +EM +   P   T  N  +D   +   ++ A  ++  M+K     +  +Y  
Sbjct: 216 LHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTL 275

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           ++ VYG+A+    ++ +F  M+    + N+ TY  ++  + +    EKA  + +EMQ  G
Sbjct: 276 MINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 335

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
            EP+   Y+ ++  + +AG    A+ +F  +   G E D   Y  ++ AY R GL   A+
Sbjct: 336 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAE 395

Query: 355 RLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
               EL+Q    P   +  +L    A++G +     V  Q   +G   D      M+  +
Sbjct: 396 AAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAY 455

Query: 411 SRNKKYANVIEVFEKMR-------SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            R  +  ++  +   M          G  PD+    +++N YG+    +  +  +  +  
Sbjct: 456 GRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAA 515

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            G           +  Y  +K++     +FE +
Sbjct: 516 RGLAADVVTWTSRIGAYARKKEYGRCLEIFEEM 548



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 139/320 (43%), Gaps = 4/320 (1%)

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
           W + +    P ++ YN L+  YG+     +A  ++  +          TY  +++ Y  S
Sbjct: 154 WILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNS 213

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
            +  +A  ++ EMQ  G+ P A  Y+  +    KA   ++A  ++Q+++      +   Y
Sbjct: 214 GQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETY 273

Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             MI  Y +      + ++ +E++    +PN       +   AR G  E+A  VF +   
Sbjct: 274 TLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ 333

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           AG   D+  +  ++E +SR        E+F  M   G  PD     +++++YG+    + 
Sbjct: 334 AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQE 393

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A+  + E++++G   + + H  +LS +    +    E +  +L            + +  
Sbjct: 394 AEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLN 453

Query: 514 IYERANRLNDASRIMNRMNK 533
            Y RA RL+D  R++  M +
Sbjct: 454 AYGRAGRLDDMERLLGAMER 473


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 187/366 (51%), Gaps = 3/366 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF---GKEGMF 70
           R  P++ ++N+V+  + +  +   A  + ++M+ RG++ +  TY+TLI  +   GK G  
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A + L++M  D +  + V ++ LI+   K  + S A+ +F+ +   G+ P++V YN++
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN         EA  L ++M    +KP+ ++++ LLN + +N    +A  +F +M +   
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++TT NI+ID Y + +  +DA  L+  M   G+ P V +YN L+           A +
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M  K ++ +++TYN +I       E +KA  L+ EM  +G++P+ +TY+T+I  + 
Sbjct: 398 LVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC 457

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G L  A  L  ++   G   +   Y  +I  + +   +  A  LL+E+ +   IP   
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517

Query: 371 AITILA 376
              I+ 
Sbjct: 518 TYEIVT 523



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 209/436 (47%), Gaps = 25/436 (5%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV + N ++  +++  +      ++ EM +R I P   +++ +I    K G  + A   +
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINVF 134
           + M+   VS +++ Y+ LI+   K+    K   A +I   +++ GI P+ V +N +I+ F
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF 246

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K K    A  +  EM  QGVKP+ V+Y++L+N    N K  EA ++  +M       ++
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +++ + +  M K A  LF  M K GI P+V +YN L+  Y + E   +A  L+R+
Sbjct: 307 ITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRI 366

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  +V TYN +I    +  + E A NL+ EM  + ++ + ITY+ +I      G+
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGE 426

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRET 370
           + +A  L  ++   G++   + Y TMI  Y + G +  A  L  ++    R  N      
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I    +  ++E+A  +  +  + G + +   +    E+            V E+M   G
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY----EI------------VTEEMMEKG 530

Query: 431 YFPD--SHIIALVLNS 444
           + PD   H+  + ++S
Sbjct: 531 FVPDIEGHLYKVAVSS 546



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 184/398 (46%), Gaps = 44/398 (11%)

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK- 136
           ++M + R+   L+ ++ +I    K+   +KA  I   +K  G+  +++ YNT+I+ + K 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 137 ---AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
               K++K A  +++EMR  G+ P+ V+++ L++ + ++     A+ VFAEMN      +
Sbjct: 212 GKIGKMYK-ADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I+         +A  L   M    + P+++++N LL  + + ++  +A  LF 
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M ++ I  NV TYN +I  Y K    E A  L + M  +G+ P+  TY+ +IA   + G
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
            L+ A  L  ++ +  ++ D + Y  +I +    G +  A RLL E+     +P+ +   
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    + G +  A  +  Q    G + +++ +  +I+ F +  K              
Sbjct: 451 TMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK-------------- 496

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
                                 E A+ L +EM E+G +
Sbjct: 497 ---------------------LEDANGLLNEMLEKGLI 513



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/423 (20%), Positives = 179/423 (42%), Gaps = 34/423 (8%)

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           F R    G+   + + N +++   K     +   + +EM  + ++P  +S++ ++N   +
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPS 228
             K  +A  +  +M       ++ T N +ID Y   G++     AD +   MR  GI P+
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V++N L+  + + +    A+ +F  M R+ ++ NVVTYN++I     + +  +AT L  
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRD 295

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           +M N  ++PN IT++ ++  + K   + +A  LF  +   G+  +   Y  +I AY    
Sbjct: 296 QMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY---- 351

Query: 349 LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
                                       +   +E+A  ++R     G   D+S + C+I 
Sbjct: 352 ---------------------------CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              R         +  +M +     D     ++++S     E + A  L  EM  +G   
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444

Query: 469 SDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
           S   +  M+  Y    +     +L  +++    +     ++V+   + + ++L DA+ ++
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLL 504

Query: 529 NRM 531
           N M
Sbjct: 505 NEM 507



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 139/300 (46%), Gaps = 7/300 (2%)

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           Y +N +       F   ++    L +T+CN ++    ++    D + ++  M +  I+P+
Sbjct: 103 YAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPT 162

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEKATN 285
           ++S+N ++    +     +A  +   M+ + +  NV+TYNT+I  Y   GK  +  KA  
Sbjct: 163 LISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADA 222

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           +++EM+  GI PN +T++ +I  + K   +  A  +F ++   GV+ + V Y ++I    
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282

Query: 346 RVGLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             G V  A     ++++   +PN I     +    +   +++A  +F      G   +++
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I+ + +++   +   ++  M   G  PD      ++    +  + E A +L SEM
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 213/490 (43%), Gaps = 51/490 (10%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P  F +N +L +++  K +     LF +    GI PD  T S LI CF  +     A
Sbjct: 52  RPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLA 111

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S    + +     + +  + LI+      +  KA+    +L + G   D V+Y T+IN 
Sbjct: 112 FSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLING 171

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    K    L+ ++    VKPD V Y+T++N   +N    +A  V++EM        
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM-------- 223

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                          + K            GI P VV+Y TL+  +       EA  L  
Sbjct: 224 ---------------IVK------------GISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+ K I  NV T+N +I    K  + ++A  L+  M    I+P+  TY+++I  +    
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
           ++  A  +F  +   GV  D   Y  MI    +  +V  A  L  E++  N IP      
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L +   +E A  + ++  + G   D+  +  +++   ++ +  +  E+F+++ + 
Sbjct: 377 SLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK 436

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           GY  + H   +++N   K   F+ A DL S+M+++GC+  D V F ++           +
Sbjct: 437 GYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM-PDAVTFDII-----------I 484

Query: 490 ESLFERLDSD 499
            +LFE+ ++D
Sbjct: 485 RALFEKDEND 494



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 112/225 (49%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +   IL  +  +A   P VF YN ++       + + A  +F  M QRG+ PD   Y+ +
Sbjct: 284 KEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNM 343

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K  M D A+S  ++M+   +  D+V Y++LI+   K     +AI++  R+K  GI
Sbjct: 344 INGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+ +Y  +++   K+   ++A+ + + +  +G   +  +Y+ L+N   +   F EAL 
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALD 463

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           + ++M +  C  D  T +I+I    + D    A+++   M   G+
Sbjct: 464 LKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+   + E+    P V++Y ++L  + ++ + E A  +F  +  +G   + + Y+ L
Sbjct: 390 RAIALCKRMKEQG-IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVL 448

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G FD A+    +ME      D V +  +I    +  +  KA  I   + + G+
Sbjct: 449 INRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508

Query: 121 V 121
           +
Sbjct: 509 L 509


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 237/530 (44%), Gaps = 59/530 (11%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           IL  IN E +      AYN+V+  + +  + + A  L +   ++G  PD Y YS LI  +
Sbjct: 281 ILQEINRE-KVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 339

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G   +A+   + M    +  +  + S L++  RKL   S+AI+ F + K SG+  D 
Sbjct: 340 CKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 399

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN  ++ + K     EA  L+ EM+  G+ PD + Y+ L++ Y    +   A  VF E
Sbjct: 400 VIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE 459

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M + N   D+ T NI+   + +  +  +   L   M   G++P+ ++Y   +  +     
Sbjct: 460 MLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGN 519

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIY-------------------GKSLEH----- 280
             EA  LF +++ K I+   V Y++M+  Y                   G  ++H     
Sbjct: 520 LSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 579

Query: 281 -----------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
                      + A+N+ + M    + P+ I+YS +I+I+ + G +D+A + F  +   G
Sbjct: 580 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 639

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA---TW 386
           + +D ++Y  ++  Y + G +  A +L  ++      P   A T+L   G ++E     W
Sbjct: 640 LSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-GHLKETLQQGW 698

Query: 387 VF----RQAF--------------DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                 R++F              D     D+  +  +I+   + +      E+F++M  
Sbjct: 699 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 758

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            G  PD++    ++N Y    E   A+DL  EM ++G +  D++ F +L+
Sbjct: 759 KGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG-IEPDELTFSVLN 807



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 205/454 (45%), Gaps = 4/454 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V+ + +V R++ +AK+ + A  ++ EM + G+ PD   YS+ +      G +D A  
Sbjct: 221 TPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYV 280

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ++ +++V  + + Y+ +++   K     +A  +       G  PD+  Y+ +I  + 
Sbjct: 281 ILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYC 340

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A    E M   G++ +    S LL  + +     EA++ F +  +    LD  
Sbjct: 341 KMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 400

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI +D Y +     +A +L   M+  G+ P  + Y  L+  Y        A  +F  M
Sbjct: 401 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 460

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  IE ++VTYN +   + KS    +  +L+  M ++G+EPN++TY   I  + + G L
Sbjct: 461 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 520

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETA--- 371
             A +LF  +   G++   V+Y +M+  Y   G   HA  L   + RQ N +   +    
Sbjct: 521 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 580

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L R G ++ A+ V +   +   V D+  +  +I ++ +N         F  M   G 
Sbjct: 581 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 640

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             D  +  +++N Y K    + A  L+ +M   G
Sbjct: 641 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 674



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/478 (20%), Positives = 197/478 (41%), Gaps = 41/478 (8%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L++   +  +Y   ++ ++ +K   + PD+  +  +     +AK   EA  +  EM E G
Sbjct: 195 LLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMG 254

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           VKPD   YS+ L    +  K+  A  +  E+N    P++    N+++D   +     +A+
Sbjct: 255 VKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAE 314

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV---------- 264
           +L  +  + G +P V  Y+ L+R Y +      A+  +  M    IE N           
Sbjct: 315 KLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCF 374

Query: 265 -------------------------VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                                    V YN  +  Y K+    +A  L+ EM+  G+ P+ 
Sbjct: 375 RKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDK 434

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           I Y+ +I+ +   G++  A  +F+++  + +E D V Y  +   + + GLV     LL  
Sbjct: 435 IHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDR 494

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNK 414
           +     +PN++    AI    R G + EA  +F    + G +  I V +  M+  +  + 
Sbjct: 495 MADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG-IDHIEVMYSSMVCGYLLSG 553

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              +   +F ++   G   D    + ++N   ++   + A ++   M E   V     + 
Sbjct: 554 WTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYS 613

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +++S+Y    D +     F  +          ++ ++   Y +A RL +A ++  +M 
Sbjct: 614 KLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMT 671



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 10/378 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           LI+      D    I +FS +   G+VP +  +N ++    +   ++       EM+   
Sbjct: 160 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 219

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD---LTTCNIMIDVYGQLDMAK 211
           + PD  +++ +     +  K  EAL V+AEM E+    D    ++  I +   G+ D+A 
Sbjct: 220 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 279

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
               +   + +  +    ++YN ++    +     EA  L     R+    +V  Y+ +I
Sbjct: 280 ---VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLI 336

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           + Y K      A +  + M + GIE N    S ++  + K G    A   F K + SG+ 
Sbjct: 337 RSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLH 396

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWV 387
           +D V+Y   +  Y + G +  A +LL+E++     P +   T L       G ++ A  V
Sbjct: 397 LDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQV 456

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +   A    DI  +  +   F ++     V ++ ++M   G  P+S    + +  + +
Sbjct: 457 FEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCR 516

Query: 448 LREFETADDLYSEMQEEG 465
                 A+ L++ ++E+G
Sbjct: 517 GGNLSEAEVLFNVVEEKG 534


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 214/471 (45%), Gaps = 16/471 (3%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W   +  +  + +   V+L   ++AK+ E AH L  E  +    P+   Y+T+I  F K 
Sbjct: 65  WAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKA 124

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG--IVPDL 124
           G  D A   L +M++  V  D++L+S LI+ L RK     +      + KS G    P++
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRK----GRIDEALEQFKSMGEECSPNV 180

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQ-----GVKPDTVSYSTLLNLYVENHKFVEAL 179
           + YNT++N   KA    EA  L ++M ++     G +PD +SYST+++   +  +  +A 
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             F  M  V C  ++ T + +ID   ++D   +   L   M++ G   +++ +N +L   
Sbjct: 241 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            + +   +A   F  + +   + NVVTYN  +    K+   ++A  ++ EM    + P+ 
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           ITYS+II  + KAG++D+A  +F ++        PV + T++  +        A R+  +
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420

Query: 360 LRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +     IP      +L      A  +E A  ++ +        D + +  +I+   R ++
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
                E  + M +    P+  I   ++    K  E + A  +   + E GC
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC 531



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 198/460 (43%), Gaps = 12/460 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR-----GIAPDRYTYSTLITCFGKEGMF 70
           SP+V  YN V+  + +A + + A  LFD+M +R     G  PD  +YST+I    K    
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A  + ++M     + ++V YS+LI+   K+   S+ + +   +K  G   +++ +N M
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   K    ++A    E + + G KP+ V+Y+  ++   +  +  EA  +  EM E   
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T + +ID + +      AD +F  M      P  V++ TLL  + E +   EA  
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M        + TYN ++     +   E A  +  +M+ +  +P+  TY+ +I    
Sbjct: 417 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           +A ++D A      + +  V  +  +   ++    + G V  A  +L  + +    P   
Sbjct: 477 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGE 536

Query: 371 AITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              IL        + E A+ + R     G V D + +   +    +  K    +EV E+M
Sbjct: 537 TFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQM 593

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
              G  PD      VL S   L   E+A   + +M   GC
Sbjct: 594 VLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGC 633



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 188/421 (44%), Gaps = 7/421 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y+ V+  + +A++ + A+  F  MR  G AP+  TYS+LI    K       +  
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M++     +++ ++ ++    K  +  KA   F RL  SG  P++V YN  ++   K
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EA  ++ EM E  V PD ++YS++++ + +  +  +A  VF  M    C     T
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++  + +   +++A R+   M   G  P + +YN L+     A+    A+ ++  M+
Sbjct: 398 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 457

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           RK+ + +  TY  +I+   ++   ++A   +  M+   + PN      ++ +  K G++D
Sbjct: 458 RKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
            A  +   +   G +    L +T  +  E + L    +     LR P  +      ++  
Sbjct: 518 EACSVLDNVVEVGCQ---PLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCV 574

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + +AG+ +EA  V  Q    G   D   +  ++       +  + I  FEKM S G  
Sbjct: 575 AEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCA 634

Query: 433 P 433
           P
Sbjct: 635 P 635



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/438 (19%), Positives = 168/438 (38%), Gaps = 54/438 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  +  ++  +N +L  + +  + E A   F+ + + G  P+  TY+  +    K G  
Sbjct: 282 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRV 341

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L +M + +V+ D++ YS++I+   K     KA  +F+R+     +P  V + T+
Sbjct: 342 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 401

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ F + K  +EA  + E+M   G  P   +Y                            
Sbjct: 402 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTY---------------------------- 433

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                  N+++D     D  + A  ++  M++    P   +Y  L++    A    EA  
Sbjct: 434 -------NVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE 486

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII---- 306
              +M+   +  N    + ++++  K  E ++A +++  +   G +P   T+  ++    
Sbjct: 487 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELY 546

Query: 307 --AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
               W  A KL         LRS G   D   Y   +    + G    A  ++ ++    
Sbjct: 547 LRKKWEAASKL---------LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597

Query: 365 TIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P E     + R+     R+E A   F +    G    +  +  +I             
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657

Query: 421 EVFEKMRSAGYFPDSHII 438
            +FE M +AG+ P +  +
Sbjct: 658 RIFEAMVAAGFTPQAQTM 675



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 108/261 (41%), Gaps = 34/261 (13%)

Query: 7   DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           D +N  A + P +  YNV++  V  A   E A  ++ +M+++   PD  TY+ LI C  +
Sbjct: 420 DMVN--AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------------ 114
               D A  +L  ME D V  +  +   L+E+  K  +  +A S+               
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 115 --------------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
                               L+S G V D   Y+  +    KA    EA  +IE+M  +G
Sbjct: 538 FKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           V+PD  +Y  +L       +   A++ F +M    C   L T  ++I      DMA +A 
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657

Query: 215 RLFWSMRKMGIDPSVVSYNTL 235
           R+F +M   G  P   +  TL
Sbjct: 658 RIFEAMVAAGFTPQAQTMRTL 678



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 10/280 (3%)

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           + N  T   ++  + K+  HE+A  L++E       PN I Y+T+I  + KAG++D+A  
Sbjct: 73  QHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFE 132

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLLHELRQPNTIPRETAITILAR 377
           L  +++  GV++D +L+ T+I    R G +  A    + + E   PN I   T +  L +
Sbjct: 133 LLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCK 192

Query: 378 AGRIEEATWVF-----RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           A RI+EA  +F     R     G   D+  +  +I+   + ++     E F++MR+ G  
Sbjct: 193 ANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCA 252

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+    + +++   K+       +L   M+E+G   +      ML       +       
Sbjct: 253 PNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF 312

Query: 493 FER-LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           FER L S    N    +  V G+  +A R+++A RI+  M
Sbjct: 313 FERLLKSGKKPNVVTYNVAVHGLC-KAGRVDEAYRILLEM 351


>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 238/518 (45%), Gaps = 43/518 (8%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI- 61
           +A+  +   E+  + +V  YN ++    R   +E  + +F+ MR+RG  PD  +++TLI 
Sbjct: 248 IAVEIFAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLIN 307

Query: 62  ----TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
               +C    G+   AI  L ++ +  +  D++ Y+ LI    + S+  +AI +FS ++S
Sbjct: 308 AKVKSCATVSGL---AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMES 364

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           +   PDL  YN MI+V+G+     +A  L E+++  G  PD V+Y++LL  + +     +
Sbjct: 365 NRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEK 424

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
              +  EM ++    D  T N +I +YG+     +A RL+  M+  G +P  V+Y  L+ 
Sbjct: 425 VRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLID 484

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           + G+A    EA  +   M    ++  + TY+ +I  Y K     +A      M+  GI+ 
Sbjct: 485 LLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKA 544

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           + + YS ++  + +  ++ +AA L+Q++  +G   D  LY+ M+ A  R  +    +R++
Sbjct: 545 DHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVV 604

Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF-------------- 403
            + ++  ++      ++L + G  +    + + A   G   D  +F              
Sbjct: 605 QDTKELGSMNPHDISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYS 664

Query: 404 -GC-MIELF-------------------SRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
             C ++E F                    +  K    +E +      G F    +   ++
Sbjct: 665 EACELVEFFREHAPDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLI 724

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           +   K  +F+ A  L+S+M+  G   S+ ++  M+S+Y
Sbjct: 725 HECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVY 762



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/489 (22%), Positives = 215/489 (43%), Gaps = 41/489 (8%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            S   Y  ++    +++Q+++A  LF +MR  G+ P    Y ++++ + + G  ++A   L
Sbjct: 716  SCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLL 775

Query: 78   QQMEQDRVSGDLVLYS--NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               E++ +  D V     ++IE   KL  +  A SI   L+      D   +N +I+ + 
Sbjct: 776  YHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYA 835

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
             +  ++ AR +   M  +G  P   S + LL   + + +  E   V  E+ +++  +  +
Sbjct: 836  FSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKS 895

Query: 196  TCNIMIDVYGQ-----------------------------------LDMAKDADRLFWSM 220
            +  +M++ + Q                                       +D   +   M
Sbjct: 896  SILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM 955

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             + G  P +  +N++L++Y   E F     +++++Q   +  +  TYNT+I +Y +    
Sbjct: 956  GEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRP 1015

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            E+  +LM +M++ G+EP   TY ++IA + K    D+A  LF++LRS+G ++D   Y  M
Sbjct: 1016 EEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLM 1075

Query: 341  IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
            +  Y   G    A+ LL  ++    +PNT      +    ++G+ EEA  + +     G 
Sbjct: 1076 MKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGA 1135

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
            V D   +  +I+ + +       IE   +M+ A   PD  I    + +     E   A++
Sbjct: 1136 VLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANN 1195

Query: 457  LYSEMQEEG 465
            L + +Q  G
Sbjct: 1196 LLNALQAVG 1204



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 129/284 (45%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y +++  + R K+      +  EM + G  PD   +++++  +     F +
Sbjct: 923  AGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQN 982

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                 Q ++   ++ D   Y+ LI +  +     + +S+  ++KS G+ P    Y +MI 
Sbjct: 983  MGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIA 1042

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             F K +L+ +A  L EE+R  G K D   Y  ++ +Y  +    +A ++   M E     
Sbjct: 1043 AFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEP 1102

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            +  T ++++  YG+    ++ADR+  ++R MG     + Y++++  Y +       I   
Sbjct: 1103 NTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKL 1162

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+   IE +   +   I+    S E   A NL+  +Q  G +
Sbjct: 1163 TEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFD 1206



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/292 (19%), Positives = 141/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P  + Y  +I    +          L +M +     DL +++++++L  
Sbjct: 916  VYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYS 975

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + ++     I+  ++ +G+ PD   YNT+I ++ +    +E   L+ +M+  G++P   
Sbjct: 976  SIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRD 1035

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +++  + +   + +A  +F E+      LD +  ++M+ +Y      + A+ L   M
Sbjct: 1036 TYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIM 1095

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P+  + + L+  YG++    EA  + + ++      + + Y+++I  Y K  + 
Sbjct: 1096 KEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDA 1155

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +     + EM+   IEP+   ++  I     +G+++ A  L   L++ G ++
Sbjct: 1156 KAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFDL 1207



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 117/561 (20%), Positives = 233/561 (41%), Gaps = 57/561 (10%)

Query: 20   FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
             AY+V+L   LR  + + A  L+ EM + G  PD   Y  ++    +E M D     +++
Sbjct: 547  LAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDV----IER 602

Query: 80   MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
            + QD      +   ++  +  K   Y     +     S+G   D   + ++++ +  +  
Sbjct: 603  VVQDTKELGSMNPHDISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSAR 662

Query: 140  FKEARLLIEEMREQGVKPDTVSYST--LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            + EA  L+E  RE    PD +   T  L+ +  +  K   AL  +     +      T  
Sbjct: 663  YSEACELVEFFREHA--PDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMY 720

Query: 198  NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
              +I    + +    A +LF  MR  G++PS   Y +++ VY        A HL    ++
Sbjct: 721  ESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEK 780

Query: 258  KEIEQNVVTYNTM--IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +I  + VT + +  I+ YGK    + A ++++ ++ R  + +   ++ +I  +  +G  
Sbjct: 781  NDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCY 840

Query: 316  DRAAMLFQKLRSSG----VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            +RA  +F  +   G    VE    L Q +IV     G ++    ++ EL+  +    +++
Sbjct: 841  ERARAIFNTMMREGPSPTVESVNGLLQALIVD----GRLSELYVVIQELQDMDLKISKSS 896

Query: 372  ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            I ++    A+AG + E   V+     AG    + ++  MI L  R K+  +V  +  +M 
Sbjct: 897  ILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMG 956

Query: 428  SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG------ 481
             AG+ PD  I   VL  Y  + EF+    +Y  +Q+ G    ++ +  ++++Y       
Sbjct: 957  EAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPE 1016

Query: 482  ---------------ARKD--------------FNMLESLFERLDSDSNINKKELHHVVA 512
                            ++D              ++  E LFE L S+     +  +H++ 
Sbjct: 1017 EGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMM 1076

Query: 513  GIYERANRLNDASRIMNRMNK 533
             +Y  +     A  ++  M +
Sbjct: 1077 KMYRTSGDHQKAENLLEIMKE 1097



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 108/219 (49%), Gaps = 6/219 (2%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            ++A  +P    YN ++    R  + E    L  +M+  G+ P R TY ++I  F K+ ++
Sbjct: 991  QDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLY 1050

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            D A    +++  +    D   Y  ++++ R   D+ KA ++   +K +GI P+    + +
Sbjct: 1051 DQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLL 1110

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            +  +GK+   +EA  +++ +R  G   DT+ YS++++ Y++       +    EM E   
Sbjct: 1111 MVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAI 1170

Query: 191  PLD--LTTCNI-MIDVYGQLDMAKDADRLFWSMRKMGID 226
              D  + TC I    + G+++   DA+ L  +++ +G D
Sbjct: 1171 EPDHRIWTCFIRAASLSGEVN---DANNLLNALQAVGFD 1206



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 40/274 (14%)

Query: 298 NAITYSTIIAIWGKA----------------------------------GKLDRAAMLFQ 323
           NA   +TI+++ GKA                                  G  ++   +F 
Sbjct: 229 NARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFN 288

Query: 324 KLRSSGVEIDPVLYQTMIVAYER--VGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
            +R  G E D V + T+I A  +    +   A  LL E+ +    P+ I   T I+  +R
Sbjct: 289 LMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSR 348

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
              ++EA  VF          D+  +  MI ++ R         +FEK++S G+ PD+  
Sbjct: 349 ESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVT 408

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
              +L ++ K    E   D+  EM + G    +  +  ++ +YG     +    L+  + 
Sbjct: 409 YNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK 468

Query: 498 SDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           S         + V+  +  +A+++ +AS++M+ M
Sbjct: 469 SSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEM 502


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 229/515 (44%), Gaps = 58/515 (11%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
            AYN+V+  + +  + + A  L +   ++G  PD Y YS LI  + K G    A+   + 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M    +  +  + S L++  RKL   S+ I+ F + K SG+  D V YN  ++ + K   
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA  L+ EM+  G+ PD + Y+ L+N Y    +   A  VF EM + N   D+ T NI
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +   + +  +  +   L   M   G++P+ ++Y   +  +       EA  LF +++ K 
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 260 IEQNVVTYNTMIKIY-------------------GKSLEH----------------EKAT 284
           I+   V Y++M+  Y                   G  ++H                + A+
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 300

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           N+ + M    + P+ I+YS +I+I+ + G +D+A + F  +   G+ ID ++Y  ++  Y
Sbjct: 301 NVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA---TWVF----RQAF----- 392
            + G +  A +L  ++      P   A T+L   G ++E     W      R++F     
Sbjct: 361 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-GHLKETLQQGWEGIAKERRSFLLRAN 419

Query: 393 ---------DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
                    D     D+  +  +I+   + +      E+F++M   G  PD++    ++N
Sbjct: 420 HNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALIN 479

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            Y    E   A+DL  EM ++G +  D++ F +L+
Sbjct: 480 GYCSQGEISKAEDLLQEMIDKG-IEPDELTFSVLN 513



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 18/346 (5%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P +  YN++     ++        L D M   G+ P+  TY   I  F + G   
Sbjct: 168 KANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLS 227

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS-KAISIFSRLKSSGIVPDLVAYNTM 130
            A      +E+  +    V+YS+++     LS ++  A  +F R+   G + D  + + +
Sbjct: 228 EAEVLFNVVEEKGIDHIEVMYSSMV-CGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 286

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   +    + A  + + M E  V PD +SYS L+++Y +N    +A   F +M +   
Sbjct: 287 INDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 346

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL------ 244
            +D+    I+++ Y +    ++A +LF  M  +GI P V++Y  LL  + +  L      
Sbjct: 347 SIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 406

Query: 245 --------FGEAIH--LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
                      A H  L   M+  +IE +V  Y  +I    K+    +A  L  EM  +G
Sbjct: 407 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 466

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + P+A  Y+ +I  +   G++ +A  L Q++   G+E D + +  +
Sbjct: 467 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ +  P V  Y V++    +A+    A  LFDEM Q+G+ PD Y Y+ LI  +  +G  
Sbjct: 428 KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEI 487

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNL 95
             A   LQ+M    +  D + +S L
Sbjct: 488 SKAEDLLQEMIDKGIEPDELTFSVL 512


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 204/455 (44%), Gaps = 34/455 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P V AYN ++       Q + A  L  +M    + PD YTY+TLI      G   +
Sbjct: 118 AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGN 174

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+  L  M +     D+V Y+ L+E   K S Y +A+ +   +++ G  PD++ YN ++N
Sbjct: 175 ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A   ++ +   G +P+TVSY+ +L       ++ +A  + AEM++   P 
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T N++I    +  + + A  +   + K G  P+ +SYN +L  + + +    A+   
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
            LM  +    ++V+YNT++    +  E + A  L+ +++++G  P  I+Y+T+I    KA
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A  L  ++ + G++ D + Y T+                                
Sbjct: 415 GKTKEALELLNEMVTKGLQPDIITYSTISSG----------------------------- 445

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L R  RIEEA   F +  D G   +  ++  ++    + ++  N I++F  M S G  
Sbjct: 446 --LCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCM 503

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           P+     +++         + A +L  E+   G V
Sbjct: 504 PNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 4/356 (1%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD   YNT+I           A +++++M  +G  PD V+Y+ LL    +   + +A+ +
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM    C  D+ T N++++   Q     DA     S+   G +P+ VSYN +L+    
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           AE + +A  L   M +K    NVVT+N +I    +    E A  ++ ++   G  PN+++
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+ I+  + K  K+DRA    + + S G   D V Y T++ A  R G V  A  LLH+L+
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393

Query: 362 QPNTIP----RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P      T I  L +AG+ +EA  +  +    G   DI  +  +     R  +  
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
             I  F K++  G  P++ +   +L    K RE   A DL+  M   GC+ ++  +
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%)

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG----------- 329
           E+A  L++ M   G+EP+A                   A L +KL +SG           
Sbjct: 76  EEALRLVESMS--GLEPSAAP--------------GPCAALIKKLCASGRTAEARRVLAA 119

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVF 388
            E D + Y  M+  Y   G +  A+RL+ ++  +P++    T I  L   GR   A  V 
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVL 179

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
                 G V D+  +  ++E   +   Y   +++ ++MR+ G  PD     +V+N   + 
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239

Query: 449 REFETADDLYSEMQEEGC 466
              + A +    +   GC
Sbjct: 240 GRVDDAIEFLKSLPSHGC 257


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 5/423 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R+ PSV  YN ++  + +  + E+A  L  EM   G+ P+  +YS +I      G  + 
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A +   QM       ++  ++ LI+         +A+ ++  +   G  P++VAYNT+I+
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                   +EA  + ++M+  G  P+  +YS L++ + ++   V A   +  M    C  
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   M+DV  +  M   A+ L   M   G  P+ +++NT ++          A+ L 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             MQ      N+ TYN ++    +  ++E+A  L QE++ R ++PN +TY+T++  + +A
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTIP 367
           G +  A  LF K    G   D + Y TMI AY + G V  A +L+  +       P+ I 
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I        IEEA     +A + G   + + +  ++  F  +  +   I + + + 
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657

Query: 428 SAG 430
             G
Sbjct: 658 RKG 660



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 207/457 (45%), Gaps = 18/457 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN +L  +L   ++++ + L+  M++ G+ P+ +TY+ L+    K    D+A   
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M       D V Y+ ++    K      A  +  R K     P +  YN +I+   K
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               + A  L+ EM + GV P+ VSYS ++N    +     A ++FA+M    C  ++ T
Sbjct: 257 EGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316

Query: 197 CNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              +I    + G+L  A D  +L   M + G +P+VV+YNTL+          EA+ +  
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKL---MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQR     NV TY+ +I  + KS +   A+     M + G  PN +TY+ ++ +  K  
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-- 371
             D+A  L +K+   G   + + + T I      G V  A +LL  ++    +P  T   
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 372 --ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             +  L R  + EEA  +F++        ++  +  ++  FSR       +++F K    
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDL---YSEMQE 463
           G  PDS     ++++Y K  + + A  L    S M+E
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 207/512 (40%), Gaps = 69/512 (13%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TY  +I   G+E   D     LQQM+ D ++    L+  +I   +++    +A+ +F R+
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
              G  P +  YN +++       F+    L   M++ G+ P+  +Y+ LL    +N + 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKD-------------------- 212
             A  +F EM+   CP D  T   M+      G++D A++                    
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 213 -------ADRLFWSMRKMGIDPSVVSYNTL---LRVYGEAEL------------------ 244
                  A +L   M   G+DP+VVSY+ +   L V G  EL                  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 245 --------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
                           EA+ L++LM +   E NVV YNT+I     +   E+A  +  +M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           Q  G  PN  TYS +I  + K+G L  A+  + ++ S G   + V Y  M+    +  + 
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  L+ ++      PNTI   T I  L   GR+E A  +  +    G + +I+ +  +
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           ++   R  KY     +F+++ +    P+      VL  + +      A  L+ +    G 
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
                 +  M+  Y  +    +   L ER+ S
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 48/353 (13%)

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M+ +NC  DL  C  +I+ Y ++  A+ A ++F+ + + G  P+V  YN LL       
Sbjct: 101 KMDGINCCEDLFIC--IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDA----- 153

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L  E  + F+++                              L   M+  G+ PN  TY+
Sbjct: 154 LLSE--NKFQMINP----------------------------LYTNMKKDGLIPNVFTYN 183

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            ++    K  ++D A  LF ++ + G   D V Y TM+ +  + G +  A+ L    + P
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-P 242

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +       I  + + GRIE A  +  +  D G   ++  + C+I     +        +F
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 424 EKMRSAGYFPDSHIIALVLNSY---GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            +M   G   + H    ++      GKL E   A DL+  M ++GC   + V +  L ++
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYE---ALDLWKLMIQDGCE-PNVVAYNTL-IH 357

Query: 481 GARKDFNMLESL--FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           G   + ++ E+L   +++     +     + ++   + ++  L  AS   NRM
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 12  EAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EAR   P++  YN VL    RA     A  LF +   RG APD  TY+T+I  + K+G  
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 71  DSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             A   ++++   +    D++ Y++LI  A    +  +A++   +  + GI P+   +N 
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635

Query: 130 MINVF 134
           ++  F
Sbjct: 636 LVRCF 640


>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g48730, chloroplastic; Flags: Precursor
 gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + + + E+  Y P+V  Y  ++  + + KQ E AH LF EM   G   +   Y+ L+
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192

Query: 62  TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + + + G FD+A + L++M+       D+  YS LI+   ++  + K   + S ++  GI
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P+ + YNT+I+ +GKAK+F E    LI+ + E   KPD+ + ++ L  +  N +     
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           + + +        ++ T NI++D YG+    K    +   M+K     ++V+YN ++  +
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    +  +LFRLMQ + I  + VT  ++++ YG++ + +K   +++ ++N  I  + 
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           + ++ ++  +G+  K      + + +   G + D + Y+TM+ AY   G+  H K L
Sbjct: 433 VFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 169/348 (48%), Gaps = 7/348 (2%)

Query: 105 YSKAISIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           +  AI +F  L+      P++  Y  +I + GK K  ++A  L +EM  +G   +   Y+
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189

Query: 164 TLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            L++ Y  + +F  A ++   M    NC  D+ T +I+I  + Q+        L   MR+
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGE-AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            GI P+ ++YNTL+  YG+A++F E    L +++   + + +  T N+ ++ +G + + E
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
              N  ++ Q+ GIEPN  T++ ++  +GK+G   + + + + ++        V Y  +I
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEEAT---WVFRQAFDAGEV 397
            A+ R G +   + L   ++     P    +  L RA GR  +A     V R   ++   
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            D+  F C+++ + R +K+A +  V E M   G+ PD      ++ +Y
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 248 AIHLFRLMQRKEI--EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           AI +F L+ R+++  + NV  Y  +I + GK  + EKA  L QEM N G   N   Y+ +
Sbjct: 133 AIQVFELL-REQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191

Query: 306 IAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           ++ + ++G+ D A  L ++++SS   + D   Y  +I ++ +V      + LL ++R+  
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251

Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANV 419
             PNTI   T I    +A    E      Q     + K D       +  F  N +   +
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
              +EK +S+G  P+     ++L+SYGK   ++    +   MQ+    ++   +  ++  
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371

Query: 480 YGARKDFNMLESLFERLDSD 499
           +G   D   +E LF  + S+
Sbjct: 372 FGRAGDLKQMEYLFRLMQSE 391



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 415 KYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           ++ + I+VFE +R   ++ P+  I   ++   GK ++ E A +L+ EM  EGCV + +V+
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSN 501
             ++S Y     F+   +L ER+ S  N
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHN 216


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 170/331 (51%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN+++  + +      A  L+ ++  RGI PD +TY+ LI  F   G +      
Sbjct: 216 PNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRL 275

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    V+ ++  Y+ LI+   K     KA  + + +   G  PDLV +NT+++ +  
Sbjct: 276 LCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCL 335

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EAR L +   E G+ PD  SY+ L+  Y +N++  EALS+F +MN      ++ T
Sbjct: 336 YNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVT 395

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID   +      A  LF ++   G  P+V++YN +L    + +L  +AI LF LM 
Sbjct: 396 YSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMF 455

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  NV +YN +I  Y KS   ++A NL +EM  R + P+++TY+ +I    K+G++ 
Sbjct: 456 ERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRIS 515

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            A  LF  +   G  +D + Y  +  A+ ++
Sbjct: 516 HAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 215/473 (45%), Gaps = 39/473 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG----------- 65
           PSV  +N++L ++++ K +  A  L  +M  RGI P   T S LI C+            
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 66  -----KEGMFDSAISWLQQMEQDRVSG-------------------DLVLYSNLIELARK 101
                K G   +AI+    M+   ++G                   D V Y  LI    K
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +    +A  +  +++   + P++V YN +++   K  L  EAR L  ++  +G+ PD  +
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+ L++ +    ++ E   +  +M + N  L++ T NI+ID   +  M   A  +   M 
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           + G  P +V++NTL+  Y       EA  LF       I  +V +YN +I  Y K+   +
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +L  +M  + + PN +TYS++I    K+G++  A  LF  +   G   + + Y  M+
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEV 397
            A  ++ LV  A  L + + +    P  ++  IL     ++ RI+EA  +F +      V
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
            D   + C+I+   ++ + ++  E+F  M   G   D     ++ +++ K++ 
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 107/196 (54%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P V++YN+++    +  + + A  LF++M  + +AP+  TYS+LI    K G   
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A      +     S +++ Y+ +++   K+    KAI +F+ +   G+ P++ +YN +I
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N + K+K   EA  L EEM  + + PD+V+Y+ L++   ++ +   A  +F  M++   P
Sbjct: 471 NGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530

Query: 192 LDLTTCNIMIDVYGQL 207
           +D+ T NI+ D + ++
Sbjct: 531 VDVITYNILFDAFSKI 546



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/466 (19%), Positives = 204/466 (43%), Gaps = 4/466 (0%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A++   ++        +V ++ ++    K+  Y  AIS+  ++   GI P +V  + +
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN +        A  ++  + ++G + + ++ +T++     N +  +AL     +     
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD  T   +I+   ++ + ++A  L   M    + P+VV YN ++    +  L  EA  
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+  +  + I+ +V TY  +I  +    +  + T L+ +M +R +  N  TY+ +I    
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G L +A  +   +   G   D V + T++  Y     V  A++L     +    P   
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW 359

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           +  IL     +  RI+EA  +F +        +I  +  +I+   ++ + +   E+F  +
Sbjct: 360 SYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAI 419

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              G  P+     ++L++  K++  + A +L++ M E G   +   +  +++ Y   K  
Sbjct: 420 HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRI 479

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +   +LFE +   + +     ++ +     ++ R++ A  + N M+
Sbjct: 480 DEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 6/334 (1%)

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
            D   DA  LF  +  M   PSVV +N +L    + + +  AI L + M  + I  ++VT
Sbjct: 56  FDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVT 115

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
            + +I  Y        A +++  +  RG + NAIT +TI+      G++ +A      + 
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
           + G  +D V Y T+I    ++GL   A  LLH++     +PN +     +  L + G + 
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  ++      G   D+  + C+I  F    ++  V  +   M       + +   +++
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSN 501
           ++  K      A D+ + M E G    D V F  ++S Y    D      LF+       
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERG-QRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
                 ++++   Y + NR+++A  + N+MN ++
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 196/425 (46%), Gaps = 7/425 (1%)

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           + +APD  T+  LI+C    G  +   + L Q+ +  +  D V ++ L+         S 
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 108 AISI-FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG--VKPDTVSYST 164
           A++I   R+   G  PD+ +Y+T++      K  +EA  LI  M E G    PD VSYST
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++ + +     +A ++F +M +   P ++ TCN +ID   ++     A+ +   M    
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           I P+  +YN+L+  Y  +  + EA+ + + M R     NVVTYN +I    KS  H +A 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            +   M   G +P+A TY +++  +   G L     +   +  +G+  +   +   I AY
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G +  A     +++Q    P+ +   T I  L + GR+++A   F Q  D G   +I
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             F  +I  FS   K+    E+F +M   G  PD  I   +++   K  +   A  L+  
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 461 MQEEG 465
           M   G
Sbjct: 427 MPRAG 431



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 211/455 (46%), Gaps = 10/455 (2%)

Query: 21  AYNVVLRNVLRAKQWELAHGL-FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           A+  +LR +   K+   A  +    M + G  PD ++YSTL+     E   + A   +  
Sbjct: 50  AFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHM 109

Query: 80  MEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           M +D      D+V YS +I    K  D  KA ++F ++   GI P++V  N++I+   K 
Sbjct: 110 MAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 169

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           +   +A  ++++M ++ + P+  +Y++L++ Y+ + ++ EA+ +  EM+      ++ T 
Sbjct: 170 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 229

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N++ID   +     +A  +F SM + G  P   +Y +LL  Y       E  ++  LM +
Sbjct: 230 NMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQ 289

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             +  N  T++  I  Y K    ++A+    +MQ  G  P+ +TY+T+I    K G+LD 
Sbjct: 290 NGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDD 349

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI--- 374
           A   F ++   G+  + + + T+I  +   G    A+ L +E+      P  T  T    
Sbjct: 350 AMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMID 409

Query: 375 -LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + G++ EA  +F     AG   ++  +  MI  +    +   V+++ + M   G  P
Sbjct: 410 RLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 469

Query: 434 DSHIIALVLN---SYGKLREFETADDLYSEMQEEG 465
            +     +L+   S G   + +T   L     E+G
Sbjct: 470 TAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDG 504



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 179/406 (44%), Gaps = 23/406 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V +Y+ V+    +      A+ LF +M   GI P+  T +++I    K    D A + 
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 178

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           LQQM  + +  +   Y++LI        +++A+ I   +   G  P++V YN +I+   K
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    EAR +   M + G KPD  +Y +LL+ Y      VE  +V   M +     +  T
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT 298

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I I  Y +     +A   F  M+++G  P +V+Y T++    +     +A+  F  M 
Sbjct: 299 FSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMI 358

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N++T+ T+I  +    + EKA  L  EM +RGI P+   ++ +I    K GK+ 
Sbjct: 359 DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVT 418

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------------- 360
            A  LF  +  +G + + V Y TMI  Y   G V    +LL ++                
Sbjct: 419 EAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 478

Query: 361 -------RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
                   +P+    +T I      GRIE+   +FR+     +  D
Sbjct: 479 DGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTD 524



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 149/319 (46%), Gaps = 16/319 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN+++  + ++     A  +F+ M Q G  PD  TY +L+  +  EG      + 
Sbjct: 224 PNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV 283

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M Q+ +  +   +S  I    K     +A   F +++  G +PD+V Y T+I+   K
Sbjct: 284 KDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCK 343

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A     +M + G+ P+ ++++TL++ +    K+ +A  +F EM +   P D+T 
Sbjct: 344 IGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTI 403

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              MID   +     +A +LF  M + G  P+VVSYNT++  Y  A   GE + L   M 
Sbjct: 404 FTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDML 463

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++   VT+NT                L+  M + G++P+  T  T+I    + G+++
Sbjct: 464 LIGLKPTAVTFNT----------------LLDGMVSMGLKPDVDTCKTLIDSCCEDGRIE 507

Query: 317 RAAMLFQKLRSSGVEIDPV 335
               LF+++     + D +
Sbjct: 508 DILTLFREMLGKADKTDTI 526



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 23/254 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S  ++AY        +  + + A   F +M+Q G  PD  TY+T+I    K G  D A+
Sbjct: 299 FSIEIYAY-------CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM 351

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   QM  D +S +++ ++ LI        + KA  +F  +   GI PD+  +  MI+  
Sbjct: 352 SRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRL 411

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA+ L + M   G KP+ VSY+T+++ Y    +  E + +  +M  +      
Sbjct: 412 FKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 471

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D                 M  MG+ P V +  TL+    E     + + LFR 
Sbjct: 472 VTFNTLLD----------------GMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFRE 515

Query: 255 MQRKEIEQNVVTYN 268
           M  K  + + +T N
Sbjct: 516 MLGKADKTDTITEN 529



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 83/157 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++  + P +  Y  V+  + +  + + A   F +M   G++P+  T++TLI  F   G +
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A     +M    +  D+ +++ +I+   K    ++A  +F  +  +G  P++V+YNTM
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           I+ +  A    E   L+++M   G+KP  V+++TLL+
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 479


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 248/545 (45%), Gaps = 54/545 (9%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           +D+ N E    PSV +YN ++  ++  + ++ AH ++  MR +GI PD YT++  +  F 
Sbjct: 102 MDFFNCE----PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFC 157

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           +     +A   L  M         V Y  +I    + +   +A  +F  +   GI PD++
Sbjct: 158 RTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIM 217

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           A+N +I+   +    +E+  L+ ++ ++GV P                            
Sbjct: 218 AFNKLIHTLCRKGHVQESERLLNKVLKRGVSP---------------------------- 249

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
                  +L T NI I  + Q  M  +A RL   + + G+ P V++YNTL+    +    
Sbjct: 250 -------NLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKV 301

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA H  R M  +  E +  TYN++I  Y K    + A  ++++   +G  P+  TY ++
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           I    + G +DRA  +F +    G++ + VL  T++    + GL+  A +L++E+ +   
Sbjct: 362 INGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGC 421

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P+       I  L + G + +A  +   A   G + D+  F  +I+ + +  K  N IE
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIE 481

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SL 479
           + ++M + G  PD      +LN   K  ++E     +  M E+GCV  + + + +L  S 
Sbjct: 482 IVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV-PNIITYNILTESF 540

Query: 480 YGARK---DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
             ARK     N++E +  +  +   +N   L   + G  +  + L+ A ++  R++++  
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDVVNFGTL---MKGFCDNGD-LDGAYQLFKRVDEQYK 596

Query: 537 FNSSL 541
           F+ ++
Sbjct: 597 FSHTI 601



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/437 (22%), Positives = 204/437 (46%), Gaps = 6/437 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P + A+N ++  + R    + +  L +++ +RG++P+ +T +  I  F +  M + AI 
Sbjct: 213 CPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  + +  ++ D++ Y+ LI    K     +A     ++ + G  PD   YN++I+ + 
Sbjct: 273 LLDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYC 331

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  + + A  ++ +   +G  PD  +Y +L+N   ++     A++VF E  E     +L 
Sbjct: 332 KLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLV 391

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN ++    Q  +   A +L   M + G  P + +YN ++    +     +A +L    
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDA 451

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    +V T+NT+I  Y K L+ + A  ++  M N G+ P+ ITY++I+    KAGK 
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKY 511

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           +     F+ +   G   + + Y  +  ++ +   V  A  L+ E++     P+ +   T 
Sbjct: 512 EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTL 571

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           +      G ++ A  +F++  +  +    I+ +  MI  F+         ++F KM   G
Sbjct: 572 MKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENG 631

Query: 431 YFPDSHIIALVLNSYGK 447
           + PDS+   ++++ + K
Sbjct: 632 FSPDSYTYRVMIDGFCK 648



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/425 (21%), Positives = 186/425 (43%), Gaps = 40/425 (9%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P  F YN ++    +    + A  +  +   +G  PD  TY +LI    ++G  D AI
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +   +  +  +  +LVL + L++   +     +A+ + + +  +G  PD+  YN +IN  
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +A  L+ +   +G  PD  +++TL++ Y +  K   A+ +             
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI------------- 482

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                              DR+ W+    G+ P V++YN++L    +A  + + +  F+L
Sbjct: 483 ------------------VDRM-WN---HGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K    N++TYN + + + K+ + E+A NL++EMQN+G+ P+ + + T++  +   G 
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580

Query: 315 LDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           LD A  LF+++            Y  MI A+     +  A++L +++ +    P++    
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I    + G I           + G +  ++ FG ++      ++    + +   M   
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700

Query: 430 GYFPD 434
           G  P+
Sbjct: 701 GIVPE 705



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 44/325 (13%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L  +NE  E   SP ++ YN+V+  + +      A  L  +   +G  PD +T++TLI  
Sbjct: 410 LKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDG 469

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           + K+   D+AI  + +M    VS D++ Y++++    K   Y   +  F  +   G VP+
Sbjct: 470 YCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPN 529

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           ++ YN +   F KA+  +EA  LIEEM+ +G+ PD V++ TL+  + +N     A  +F 
Sbjct: 530 IITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFK 589

Query: 184 EMNE-VNCPLDLTTCNIMIDVY-GQLDMAKDADRLF------------WSMRKM------ 223
            ++E       + T NIMI+ + G+L+M   A++LF            ++ R M      
Sbjct: 590 RVDEQYKFSHTIATYNIMINAFAGKLNMNM-AEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 224 -----------------GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
                            G+ PS+ ++  +L          EA+ +  LM  K I   VV 
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV- 707

Query: 267 YNTMIKIYGKSLEHEK--ATNLMQE 289
            NT+ +   K +   K    NLM++
Sbjct: 708 -NTIFEADKKEVAAPKIVVENLMKK 731



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 154/370 (41%), Gaps = 17/370 (4%)

Query: 107 KAISIFSRLKS-SGIVPDLVAYNTMINVFG-------KAKLFKEARLLIEEMREQGVKPD 158
           KA+ IF+ +K   G    L+ Y  MI   G         ++  E R+ I+    +GV   
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--- 78

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
              Y   +  Y    K  EA+ VF  M+  NC   + + N ++++  +      A +++ 
Sbjct: 79  ---YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYM 135

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            MR  GI P V ++   ++ +        A  L   M  +  E + V Y T+I  + +  
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A  L +EM   GI P+ + ++ +I    + G +  +  L  K+   GV  +     
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVN 255

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
             I  + +  ++  A RLL  + +   P+ I   T I  L +  ++ EA    R+  + G
Sbjct: 256 IFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D   +  +I+ + +     N  ++       G+ PD      ++N   +  + + A 
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 456 DLYSEMQEEG 465
           ++++E  E+G
Sbjct: 376 NVFNEAMEKG 385



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 10/149 (6%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           ++E+ ++S ++  YN+++          +A  LF++M + G +PD YTY  +I  F K G
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYS---NLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             +S  S+L    +  +   L  +    N + L R++ +   A+ I   +   GIVP++V
Sbjct: 651 NINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHE---AVGIIHLMVHKGIVPEVV 707

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQG 154
             NT+       K     ++++E + ++G
Sbjct: 708 --NTIFE--ADKKEVAAPKIVVENLMKKG 732


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/569 (22%), Positives = 246/569 (43%), Gaps = 50/569 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP  F Y  ++  + +  + + A  L DEM   G+ P+   Y TL+  F KEG    A  
Sbjct: 310 SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFD 369

Query: 76  WLQQMEQDRVSGDLVLYSNLI-------ELAR---------------------------- 100
            L++M    V  + ++Y NLI       +L R                            
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +  D   A  + + +++SGI+P++ +Y  MIN   +    KEA  L+EEM  +G+KP+  
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+ L+  + +      A     +M + N   DL   N +I     +   ++A+  +  +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K G+ P   +Y+ L+  Y +     +A  L R M    ++ N  TY  +++ Y KS ++
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           EK ++++Q M   G +P+   Y  +I    ++  ++ A M+  ++  +G+  D  +Y ++
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I    ++  +  A  LL E+     +P  +     I    R+G I  A  VF      G 
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           V +   +  +I+   +N    +  +++++M   G  PD+ +  ++        + E A  
Sbjct: 730 VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALF 789

Query: 457 LYSEMQEEG----CVFSDQVHFQMLSLYGARKDFNMLESLFE-RLDSDSNINKKELHHVV 511
           L  EM   G     +F+  VH      +  R      E L    +D +   N + +  VV
Sbjct: 790 LTEEMFNRGYANVSLFNTLVHG-----FCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844

Query: 512 AGIYERANRLNDASRIMNRMNKRRTFNSS 540
           +  + +A +L +A R+   + +++   S+
Sbjct: 845 SE-FGKAGKLGEAHRVFAELQQKKASQSA 872



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 198/454 (43%), Gaps = 39/454 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+    N +L+++LRA   EL   L   M   GI PD YTYST I    K   FD+A  
Sbjct: 205 APTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKK 264

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M +   + + V Y+ +I    +     +A      +   G+ PD   Y  ++N   
Sbjct: 265 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLC 324

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    KEA+ L++EM   G+KP+ V Y TL++ +++  K  EA  +  EM          
Sbjct: 325 KGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA------- 377

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                                       G+ P+ + Y+ L+R   +    G A  L + M
Sbjct: 378 ----------------------------GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  +  +  TYN +++ + +  + + A  L+ EM+N GI PN  +Y  +I    + G+ 
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
             A  L +++ S G++ +  +Y  +I+ + + G ++ A   L ++ + N  P      + 
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L+  GR+EEA   + Q    G V D   +  +I  + +        ++  +M ++G 
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++     +L  Y K  ++E    +   M   G
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 197/444 (44%), Gaps = 31/444 (6%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YNV++  + R+   E A G  +EM   G++PD +TY  L+    K      A + L +M 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  ++V+Y  L++   K    ++A  I   + S+G+ P+ + Y+ +I    K     
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L++EM + G++PDT +Y+ L+  + + H    A  +  EM       ++ +  IMI
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +   Q   +K+A  L   M   G+ P+   Y  L+  + +      A      M +  + 
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            ++  YN++IK        E+A     ++Q RG+ P+  TYS +I  + K G L++A  L
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI 381
            +++ +SG++ +   Y  ++  Y                                ++   
Sbjct: 581 LRQMLNSGLKPNADTYTDLLEGY-------------------------------FKSNDY 609

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+ + + +    +G+  D  ++G +I   SR++       V  ++   G  PD HI + +
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           ++   K+ + E A  L  EM +EG
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEG 693



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/465 (21%), Positives = 209/465 (44%), Gaps = 5/465 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F YN +++   +    + A  L +EMR  GI P+ Y+Y  +I    + G    A + 
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M  + +  +  +Y+ LI    K  + S A     ++  + + PDL  YN++I     
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA     +++++G+ PD  +YS L++ Y +     +A  +  +M       +  T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +++ Y + +  +    +  SM   G  P    Y  ++R    +E    A  +   ++
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +  +  ++  Y+++I    K  + EKA  L+ EM   G+EP  + Y+ +I  + ++G + 
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           RA  +F  + + G+  + V Y  +I    + G +  A  L  E+      P      +LA
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775

Query: 377 R----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                A  +E+A ++  + F+ G   ++S+F  ++  F +  K     ++   M      
Sbjct: 776 TGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIV 834

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           P++  +  V++ +GK  +   A  +++E+Q++    S    F +L
Sbjct: 835 PNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL 879



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 178/383 (46%), Gaps = 40/383 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P +F YN +++ +    + E A   + ++++RG+ PD +TYS LI  + K G  +
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L+QM    +  +   Y++L+E   K +DY K  SI   +  SG  PD   Y  +I
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +++  + A +++ E+ + G+ PD   YS+L          +  L   A+M +    
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL----------ISGLCKIADMEK---- 681

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                        G LD           M K G++P +V YN L+  +  +     A ++
Sbjct: 682 -----------AVGLLD----------EMAKEGLEPGIVCYNALIDGFCRSGDISRARNV 720

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  +  K +  N VTY  +I    K+ +   A +L +EM +RGI P+A  Y+ +      
Sbjct: 721 FDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSD 780

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           A  L++A  L +++ + G   +  L+ T++  + + G +   ++LLH +      PN   
Sbjct: 781 AADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQT 839

Query: 368 RETAITILARAGRIEEATWVFRQ 390
            E  ++   +AG++ EA  VF +
Sbjct: 840 VEKVVSEFGKAGKLGEAHRVFAE 862


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 237/530 (44%), Gaps = 59/530 (11%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           IL  IN E +      AYN+V+  + +  + + A  L +   ++G  PD Y YS LI  +
Sbjct: 399 ILQEINRE-KVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 457

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G   +A+   + M    +  +  + S L++  RKL   S+AI+ F + K SG+  D 
Sbjct: 458 CKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 517

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V YN  ++ + K     EA  L+ EM+  G+ PD + Y+ L++ Y    +   A  VF E
Sbjct: 518 VIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE 577

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M + N   D+ T NI+   + +  +  +   L   M   G++P+ ++Y   +  +     
Sbjct: 578 MLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGN 637

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIY-------------------GKSLEH----- 280
             EA  LF +++ K I+   V Y++M+  Y                   G  ++H     
Sbjct: 638 LSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 697

Query: 281 -----------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
                      + A+N+ + M    + P+ I+YS +I+I+ + G +D+A + F  +   G
Sbjct: 698 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 757

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA---TW 386
           + +D ++Y  ++  Y + G +  A +L  ++      P   A T+L   G ++E     W
Sbjct: 758 LSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-GHLKETLQQGW 816

Query: 387 VF----RQAF--------------DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                 R++F              D     D+  +  +I+   + +      E+F++M  
Sbjct: 817 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 876

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            G  PD++    ++N Y    E   A+DL  EM ++G +  D++ F +L+
Sbjct: 877 KGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG-IEPDELTFSVLN 925



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 205/454 (45%), Gaps = 4/454 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V+ + +V R++ +AK+ + A  ++ EM + G+ PD   YS+ +      G +D A  
Sbjct: 339 TPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYV 398

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ++ +++V  + + Y+ +++   K     +A  +       G  PD+  Y+ +I  + 
Sbjct: 399 ILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYC 458

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A    E M   G++ +    S LL  + +     EA++ F +  +    LD  
Sbjct: 459 KMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 518

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI +D Y +     +A +L   M+  G+ P  + Y  L+  Y        A  +F  M
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  IE ++VTYN +   + KS    +  +L+  M ++G+EPN++TY   I  + + G L
Sbjct: 579 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 638

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETA--- 371
             A +LF  +   G++   V+Y +M+  Y   G   HA  L   + RQ N +   +    
Sbjct: 639 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 698

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L R G ++ A+ V +   +   V D+  +  +I ++ +N         F  M   G 
Sbjct: 699 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 758

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             D  +  +++N Y K    + A  L+ +M   G
Sbjct: 759 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 792



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/478 (20%), Positives = 197/478 (41%), Gaps = 41/478 (8%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L++   +  +Y   ++ ++ +K   + PD+  +  +     +AK   EA  +  EM E G
Sbjct: 313 LLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMG 372

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           VKPD   YS+ L    +  K+  A  +  E+N    P++    N+++D   +     +A+
Sbjct: 373 VKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAE 432

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV---------- 264
           +L  +  + G +P V  Y+ L+R Y +      A+  +  M    IE N           
Sbjct: 433 KLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCF 492

Query: 265 -------------------------VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                                    V YN  +  Y K+    +A  L+ EM+  G+ P+ 
Sbjct: 493 RKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDK 552

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           I Y+ +I+ +   G++  A  +F+++  + +E D V Y  +   + + GLV     LL  
Sbjct: 553 IHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDR 612

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV-FGCMIELFSRNK 414
           +     +PN++    AI    R G + EA  +F    + G +  I V +  M+  +  + 
Sbjct: 613 MADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG-IDHIEVMYSSMVCGYLLSG 671

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              +   +F ++   G   D    + ++N   ++   + A ++   M E   V     + 
Sbjct: 672 WTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYS 731

Query: 475 QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +++S+Y    D +     F  +          ++ ++   Y +A RL +A ++  +M 
Sbjct: 732 KLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMT 789



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 10/378 (2%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           LI+      D    I +FS +   G+VP +  +N ++    +   ++       EM+   
Sbjct: 278 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 337

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD---LTTCNIMIDVYGQLDMAK 211
           + PD  +++ +     +  K  EAL V+AEM E+    D    ++  I +   G+ D+A 
Sbjct: 338 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 397

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
               +   + +  +    ++YN ++    +     EA  L     R+    +V  Y+ +I
Sbjct: 398 ---VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLI 454

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           + Y K      A +  + M + GIE N    S ++  + K G    A   F K + SG+ 
Sbjct: 455 RSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLH 514

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWV 387
           +D V+Y   +  Y + G +  A +LL+E++     P +   T L       G ++ A  V
Sbjct: 515 LDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQV 574

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F +   A    DI  +  +   F ++     V ++ ++M   G  P+S    + +  + +
Sbjct: 575 FEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCR 634

Query: 448 LREFETADDLYSEMQEEG 465
                 A+ L++ ++E+G
Sbjct: 635 GGNLSEAEVLFNVVEEKG 652


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 212/491 (43%), Gaps = 61/491 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E R  P +   NV+L       Q + A  L   M     APD  +Y T++    K G  +
Sbjct: 205 ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264

Query: 72  SAISWLQQMEQDRVSGDLVLYS-----NLIELARKLSD-YSKAISIFSRLKSSGIVPDLV 125
            A+      E    S            N++ L    +D   +A+ +F ++    + PD  
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +Y  +I+   KA    +AR L +++   GV P TV+Y++L++     + F +A  +FA+M
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 384

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
           N   CP    T N+MID   +  M ++A  L   M + G  P VV+YNT++    ++   
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 444

Query: 246 GEAIHLFR--------------------LMQRKEIEQ----------------------- 262
            EA+ LF                     L Q+ +I+Q                       
Sbjct: 445 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV 504

Query: 263 -NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +VVTY+T+I         + A +L+++M  R  +P  +T +T+I    KAG++  A  +
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILAR 377
              + SSG   D V Y T++  + R G    A+ LL ++      PN +     ++ L +
Sbjct: 565 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 624

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           A R+ EA  VF Q   +G   ++  +  +I  F    +    +++F +M  AG  PD H+
Sbjct: 625 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD-HV 683

Query: 438 IALVLNSYGKL 448
           +      YG L
Sbjct: 684 V------YGTL 688



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 200/422 (47%), Gaps = 13/422 (3%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN+V+  + +  + + A  +F++M +R ++PD ++Y  LI    K G  + A +  Q++
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               V+   V Y++LI      + +  A  +F+ +   G  P  V YN MI+   K  + 
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  LI++M E G  PD V+Y+T+++   ++ +  EAL +F EM  + C  +  + N +
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469

Query: 201 ---------IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                    ID   Q     +A RL   M   G  P VV+Y+TL+          +A HL
Sbjct: 470 ILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M +++ +  VVT NT+I    K+   ++A  ++  M + G  P+ +TY+T++    +
Sbjct: 530 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 589

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG+ +RA  L   + + G+  + V Y  ++    +   +  A  +  +++     P    
Sbjct: 590 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 649

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            T L      AG+++    +F +   AG   D  V+G +     ++ + A  +E+  + R
Sbjct: 650 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR 709

Query: 428 SA 429
            +
Sbjct: 710 ES 711



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 185/403 (45%), Gaps = 14/403 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V + + +NE    SP  ++Y +++  + +A +   A  LF ++   G+ P    Y++LI
Sbjct: 307 AVQMFEKMNER-NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                   FD A      M +       V Y+ +I+ + K     +A  +  ++   G V
Sbjct: 366 HGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV 425

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL---------LNLYVEN 172
           PD+V YNT+++   K+   +EA LL  EM   G  P+  S++T+         ++   + 
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR 485

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
            K  EA  +   M +     D+ T + +I     +    DA  L   M K    P+VV+ 
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NTL+    +A    EA  +   M       +VVTYNT++  + ++ + E+A  L+ +M  
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 605

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           RG+ PN +TY+ +++   KA +L  A  +F +++SSG   +   Y  +I+ +   G V  
Sbjct: 606 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 665

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
             +L  E+      P+ +   T    L ++GR   A  + R+ 
Sbjct: 666 GLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 708



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 134/607 (22%), Positives = 227/607 (37%), Gaps = 152/607 (25%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +SP    YNV++ ++ + ++ E    +   M  RG  PD +T++T++    K G  D
Sbjct: 37  EECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMD 96

Query: 72  SAISWLQQMEQDRV----------SGDLVLYSNL-------------------------- 95
            A   + +M    +          + +L L  ++                          
Sbjct: 97  EAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALC 156

Query: 96  --------IELARKLSDYSKAI------SIFSRLKSSGIV-------------PDLVAYN 128
                   +ELAR +S+    +      S+   L  SG +             P LV  N
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLN 216

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN-------------LY------ 169
            ++  F       +AR L+  M ++   PD VSY T+L+             L+      
Sbjct: 217 VLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELP 276

Query: 170 ----------------------VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
                                  +N +  EA+ +F +MNE N   D  +  I+ID   + 
Sbjct: 277 SSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKA 336

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
               DA  LF  +   G+ PS V+Y +L+     A  F +A  LF  M R+    + VTY
Sbjct: 337 GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY 396

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA--------------- 312
           N MI    K    E+A +L+++M   G  P+ +TY+T++    K+               
Sbjct: 397 NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER 456

Query: 313 -----------------------------GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
                                        GKLD A  L +++   G   D V Y T+I  
Sbjct: 457 LGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 516

Query: 344 YERVGLVAHAKRLLHEL--RQ--PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
              +  V  A+ LL ++  RQ  P  + + T I  L +AGRI+EA  V      +G+  D
Sbjct: 517 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 576

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  ++    R  +     E+   M + G  P+      +++   K      A  +++
Sbjct: 577 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 636

Query: 460 EMQEEGC 466
           +M+  GC
Sbjct: 637 QMKSSGC 643



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 5/172 (2%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M + GI P+ + + ++++ +       EA+ +F LM+        V YN +I    K  E
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQE 59

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            E    ++Q M +RG  P++ T++TI+    KAGK+D A ++  ++RS    I P    +
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR--MIPPYFATS 117

Query: 340 MIVAYERV--GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
             +A+E    G +  A +LL  +   N+      +  L +A R+++A  + R
Sbjct: 118 SFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELAR 169



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  Y  ++  + +A +   A G+F +M+  G AP+ +TY+ LI  F   G  D  + 
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
              +M    +S D V+Y  L     K    ++A+ I    + S
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 711


>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 715

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 172/329 (52%), Gaps = 1/329 (0%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
            +WI  +         YNV ++++   +Q+ +   L  +M   G+  D  TYST+I+C  
Sbjct: 177 FNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAK 236

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K  +FD A+ W ++M +  +  D V +S ++++  +L    + +++F R +++G  PD +
Sbjct: 237 KCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPI 296

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            ++ +  +FG+A  +   R +++EM+  GV+P+ V Y+TLL    +  K   A S+F EM
Sbjct: 297 TFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 356

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     +  T   +I +YG+   +KDA  L+  M++ G     + YNTLL +  +  L 
Sbjct: 357 IDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLI 416

Query: 246 GEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            EA  LFR M++ E  + +  +Y  M+ IYG     +KA  L +EM   GIE N +  + 
Sbjct: 417 EEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTC 476

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           +I   GKA ++D    +F      GV+ D
Sbjct: 477 LIQCLGKAMEIDDLVKVFDISVERGVKPD 505



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N + +   L  + K    F+ +K+  ++P + + YN  +      + F     L  +M +
Sbjct: 159 NALLVLNSLRPWQKTHMFFNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMID 218

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            GV+ D ++YST+++   + + F +A+  F  M +     D  T + ++DVY +L   ++
Sbjct: 219 GGVELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEE 278

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              LF   R  G  P  ++++ L +++GEA  +    ++ + M+   ++ N+V YNT+++
Sbjct: 279 VVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLE 338

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             GK+ +   A +L +EM + GI PN  T + +I I+GKA     A  L+++++ +G  +
Sbjct: 339 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPM 398

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D +LY T++     VGL+  A+ L  +++Q     P++      + I    G +++A  +
Sbjct: 399 DFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKL 458

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           F +    G   ++    C+I+   +  +  ++++VF+     G  PD  +   +L+
Sbjct: 459 FEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLS 514



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 130/273 (47%), Gaps = 5/273 (1%)

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            + YN  ++       FG    L   M    +E + +TY+T+I    K    +KA    +
Sbjct: 190 TIFYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFE 249

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M   G+ P+ +T+S I+ ++ + GK++    LF++ R++G + DP+ +  +   +   G
Sbjct: 250 RMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAG 309

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
                + +L E++    QPN +   T +  + +AG+   A  +F +  D+G   +     
Sbjct: 310 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 369

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM-QE 463
            +I+++ + +   + +E++++M+  G+  D  +   +LN    +   E A+ L+ +M Q 
Sbjct: 370 AVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQS 429

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           E C      +  ML++YG+    +    LFE +
Sbjct: 430 EHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEM 462



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 123/247 (49%), Gaps = 5/247 (2%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G++   ++Y+T++    +  LF +A++ F  M +  +  + VT++ ++ +Y +  + E+ 
Sbjct: 220 GVELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEV 279

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            NL +  +  G +P+ IT+S +  ++G+AG  D    + Q+++S GV+ + V+Y T++ A
Sbjct: 280 VNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEA 339

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAIT----ILARAGRIEEATWVFRQAFDAGEVKD 399
             + G    A+ L  E+      P E  +T    I  +A   ++A  ++++  + G   D
Sbjct: 340 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMD 399

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLY 458
             ++  ++ + +          +F  M+ + +  PDS     +LN YG     + A  L+
Sbjct: 400 FILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLF 459

Query: 459 SEMQEEG 465
            EM + G
Sbjct: 460 EEMSKFG 466



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN +L  + +A +   A  LF+EM   GIAP+  T + +I  +GK      A+  
Sbjct: 328 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALEL 387

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
            ++M+++    D +LY+ L+ +   +    +A ++F  +K S    PD  +Y  M+N++G
Sbjct: 388 WKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYG 447

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 +A  L EEM + G++ + +  + L+    +  +  + + VF    E     D  
Sbjct: 448 SEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPDDR 507

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            C  ++ V      +KD +++   +++   +P +V++  L+
Sbjct: 508 LCGCLLSVVSLSQGSKDQEKVLACLQRA--NPKLVAFIQLI 546



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 2/171 (1%)

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T I+   +    ++A + F + +  G + D   F  ++++++R  K   V+ +F
Sbjct: 224 DNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLF 283

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           E+ R+ G+ PD    +++   +G+  +++    +  EM+  G   +  V+  +L   G  
Sbjct: 284 ERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKA 343

Query: 484 KDFNMLESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                  SLFE + DS    N+K L  V+  IY +A    DA  +  RM +
Sbjct: 344 GKPGFARSLFEEMIDSGIAPNEKTLTAVIK-IYGKARWSKDALELWKRMKE 393


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 182/387 (47%), Gaps = 5/387 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +VA+++ I      +P++  YN +L  + +  + E A  L  ++   G  PD  TY++LI
Sbjct: 184 AVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
              GKE     A    ++M    +  D V Y+ LI    +     +A S++  + S G V
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 302

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD+V  +TMI+   KA     A  + + M  +G+ P+ V YS L++   +  K   AL +
Sbjct: 303 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 362

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            A+M +  C  D  T NI+ID   +    + A   F  M + G  P V +YN L+  + +
Sbjct: 363 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCK 422

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A  +F  M       NVVTY T+I    K  +  KA+   Q M+ RG  P++  
Sbjct: 423 AGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFV 482

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           YS+++    K+GKL+   MLF ++  SGV  +      +I    +   V  A  L + +R
Sbjct: 483 YSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR 541

Query: 362 Q---PNTIPRETAITILARAGRIEEAT 385
           +   P+     + I+ L ++ ++   T
Sbjct: 542 KEGMPHPYAYNSIISTLIKSAKVNPCT 568



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 186/391 (47%), Gaps = 4/391 (1%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A++  + E+   +PS+  +N+VL  + ++ +   A   F+     G   D +TY+ ++  
Sbjct: 115 AVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDW 174

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             K      A++ ++++  +  +  +  Y+ L+    K+    +AI +  ++  +G  PD
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 234

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +V Y ++I+  GK K   EA  L +EM  +G+  DTV Y+ L+   ++  K  +A SV+ 
Sbjct: 235 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYK 294

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
            M    C  D+ T + MID   +      A R+F SM   G+ P+ V Y+ L+    +A 
Sbjct: 295 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 354

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A+ +   M++     + +TYN +I    KS + E A     EM   G +P+  TY+
Sbjct: 355 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 414

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
            +++ + KAG  D A  +F  + SS    + V Y T+I    +   +  A      +++ 
Sbjct: 415 ILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKER 474

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQ 390
              P++    + +  L ++G++E    +F +
Sbjct: 475 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDE 505



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 202/458 (44%), Gaps = 9/458 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDS 72
           +  SV   N +L    R K+   A  L          PD  T++ LIT  C  +E   + 
Sbjct: 55  FQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREP--EE 112

Query: 73  AISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           A + +++ME+D  V+  L  ++ ++    K      A+  F    ++G   D+  Y  ++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K K  ++A  L+E++   G  P   +Y+ LLN   +  +  EA+ +  ++ +  C 
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T   +ID  G+   + +A +LF  M   G+    V Y  L+R   +A    +A  +
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           ++ M  +    +VVT +TMI    K+     A  + + M+ RG+ PN + YS +I    K
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           A K+D A  +  +++ +    D + Y  +I    + G V  A+    E+ +    P    
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412

Query: 372 ITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             IL     +AG  + A  VF     +    ++  +G +I    + ++       F+ M+
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             G  PDS + + +++   K  + E    L+ EM+  G
Sbjct: 473 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 184/428 (42%), Gaps = 34/428 (7%)

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKF 175
           ++  +PD+  +N +I  +  A+  +EA  +I EM E  GV P   +++ +L+   ++ K 
Sbjct: 87  ATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKV 146

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
           + A+  F       C +D+ T   ++D   +    +DA  L   +   G  P++ +YN L
Sbjct: 147 LAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNAL 206

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           L    +     EAI L R +       +VVTY ++I   GK     +A  L +EM  RG+
Sbjct: 207 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 266

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
             + + Y+ +I    +AGK+ +A+ +++ + S G   D V   TMI              
Sbjct: 267 VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG------------ 314

Query: 356 LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
                              L +AGRI  A  +F+     G   +  V+  +I    + +K
Sbjct: 315 -------------------LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               +E+  +M+ A   PD+    ++++   K  + E A   + EM E GC      +  
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415

Query: 476 MLSLYGARKDFNMLESLFERLDSD-SNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           ++S +    + +    +F+ + S   + N      +++G+ +R  +L  AS     M +R
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR-RQLTKASLYFQHMKER 474

Query: 535 RTFNSSLV 542
                S V
Sbjct: 475 GCPPDSFV 482



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 12/268 (4%)

Query: 211 KDADRLFW------SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
           KDAD L W      S  + G   SV + N LL V+   +   EA +L +         +V
Sbjct: 36  KDAD-LAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDV 94

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
            T+N +I  Y  + E E+A  +++EM+ + G+ P+  T++ ++    K+GK+  A   F+
Sbjct: 95  ETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAG 379
              ++G  ID   Y  ++    +   +  A  L+ ++      P        +  L + G
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           R+EEA  + R+  D G   D+  +  +I+   + K+     ++F++M   G   D+    
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCV 467
            ++    +  +   A  +Y  M  +GCV
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCV 302


>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 177/341 (51%), Gaps = 1/341 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           LF+  R  G     Y++S +I+ +G+ G F  A+   + M    V  +L+ Y++LI+   
Sbjct: 200 LFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGA 259

Query: 101 KLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
           K   D+   +  F  + + GIVPD + YN++++V     +++ A+ L+ EM ++G+  D 
Sbjct: 260 KGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDA 319

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
            +Y+T L+   +  +   A  V  EM+       + T + MID   + ++ +DA  L+  
Sbjct: 320 FTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEE 379

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M+   I    VSYNT++ +Y +   F EAI   + M+   ++++VVTYN ++  YG+   
Sbjct: 380 MKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGM 439

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           +++   L +EM+   I PN +TYST+I ++ K G    A  +++  + + +E+D V Y +
Sbjct: 440 YDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTS 499

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           +I +  + GLV  +  LL  + +    P       +  A R
Sbjct: 500 IIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASR 540



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 162/291 (55%), Gaps = 1/291 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P++ +YN ++    + +  +++    FDEM   GI PDR TY++L++    +GM+++A  
Sbjct: 246 PNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQK 305

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M+Q  +  D   Y+  ++   K      A  +   + S  + P +V Y+TMI+   
Sbjct: 306 LLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCA 365

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA L ++A  L EEM+ + +  D VSY+T++ +Y +  +F EA+    EM       D+ 
Sbjct: 366 KANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVV 425

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++  YG+  M  +  RLF  M+   I P+ ++Y+T++ VY +  +F EA+ +++  
Sbjct: 426 TYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDF 485

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           ++ ++E +VV Y ++I    K+   E +  L+  M  +GI+PN +T+++II
Sbjct: 486 KKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSII 536



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 198/397 (49%), Gaps = 13/397 (3%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEM--RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           Y  +L+       + LA   FD +  +Q G        ST+I   G+ G  + A+   + 
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
              +     +  +S +I    +   +S A+ +F  ++S G+ P+L++YN++I+   K ++
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEV 263

Query: 140 -FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F       +EM  +G+ PD ++Y++LL++      +  A  + +EM++     D  T N
Sbjct: 264 DFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYN 323

Query: 199 IMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             +D     GQ+D+A+   R+   M    + P+VV+Y+T++    +A L  +A++L+  M
Sbjct: 324 TYLDTLCKGGQIDLAR---RVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEM 380

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + + I  + V+YNTM+ IY K    ++A    +EM++ G++ + +TY+ +++ +G+ G  
Sbjct: 381 KLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMY 440

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           D    LF+++++  +  + + Y TMI  Y + G+   A  +  + ++     + +   + 
Sbjct: 441 DEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSI 500

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           I  L + G +E +  +     + G   ++  F  +I+
Sbjct: 501 IDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIID 537



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 180/371 (48%), Gaps = 30/371 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
            F YN  L  + +  Q +LA  + +EM  R + P   TYST+I    K  + + A++  +
Sbjct: 319 AFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYE 378

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+   +S D V Y+ ++ +  KL  + +AI     ++S G+  D+V YN +++ +G+  
Sbjct: 379 EMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYG 438

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           ++ E R L EEM+   + P+T++YST++++Y +   F EA+ V+ +  +    +D+    
Sbjct: 439 MYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYT 498

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-----------RVYGEAELFGE 247
            +ID   +  + + +  L  +M + GI P+VV++N+++            V+G ++    
Sbjct: 499 SIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEY 558

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN----------------LMQEMQ 291
                  M      QN    + ++K++ + L  EKA +                L Q+M 
Sbjct: 559 PTEQLSSMLIDGAFQNKTGDDRILKMF-EQLAAEKAGHREKDRKGRQDQHCILWLFQKMH 617

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
              I+PN +T+S I+    +    + A+ML   LR    ++  V +  ++   E+V    
Sbjct: 618 ELNIKPNVVTFSAILNACSRCNSFEDASMLLGALRLFDNQVYGVTHGLLMGYREQVWF-- 675

Query: 352 HAKRLLHELRQ 362
            A+ L  E+R+
Sbjct: 676 QAQTLFDEMRR 686



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 178/390 (45%), Gaps = 17/390 (4%)

Query: 57  YSTLITCFGKEGMFDSA------ISWLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAI 109
           Y  ++  FG  G F  A      I W Q     R++ G LV  S +I    +L + + A+
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQN---GRIAKGKLV--STMIGTLGRLGEINHAL 198

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +F   +  G    + +++ MI+ +G+   F +A  L   MR  GV P+ +SY++L++  
Sbjct: 199 RLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAG 258

Query: 170 VENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            +    F   +  F EM       D  T N ++ V     M + A +L   M + GI   
Sbjct: 259 AKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRD 318

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
             +YNT L    +      A  +   M  + +   VVTY+TMI    K+   E A NL +
Sbjct: 319 AFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYE 378

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM+ R I  + ++Y+T++ I+ K G+ D A    +++ S G++ D V Y  ++  Y R G
Sbjct: 379 EMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYG 438

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           +    +RL  E++     PNT+   T I +  + G  +EA  V++    A    D+  + 
Sbjct: 439 MYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYT 498

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            +I+   +N    + I +   M   G  P+
Sbjct: 499 SIIDSLCKNGLVESSIMLLIAMIEKGIKPN 528



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 5/269 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHLFRLMQRK 258
           MI  YG+     DA  LF SMR  G+ P+++SYN+L+    + E+ F   +  F  M  +
Sbjct: 219 MISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAE 278

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  + +TYN+++ +       E A  L+ EM  +GI  +A TY+T +    K G++D A
Sbjct: 279 GIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLA 338

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
             + +++ S  V    V Y TMI    +  L+  A  L  E++      + +   T + I
Sbjct: 339 RRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGI 398

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            A+ GR +EA    ++    G  +D+  +  ++  + R   Y  V  +FE+M++   +P+
Sbjct: 399 YAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPN 458

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQE 463
           +   + +++ Y K   F+ A D+Y + ++
Sbjct: 459 TLTYSTMIDVYTKGGMFQEAMDVYKDFKK 487



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 127/306 (41%), Gaps = 40/306 (13%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + MI   G+L     A RLF S R  G   +V S++ ++  YG    F +A+ LFR M+ 
Sbjct: 182 STMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRS 241

Query: 258 KEIEQNVVTYNTMIKIYGKS-LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             +  N+++YN++I    K  ++ +       EM   GI P+ +TY++++++    G  +
Sbjct: 242 WGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWE 301

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  L  ++   G+  D   Y T +    + G +  A+R+L E+      P  +   T I
Sbjct: 302 TAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMI 361

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              A+A  +E+A                                   + ++E+M+     
Sbjct: 362 DGCAKANLLEDA-----------------------------------LNLYEEMKLRSIS 386

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            D      ++  Y KL  F+ A     EM+  G       +  +LS YG    ++ +  L
Sbjct: 387 VDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRL 446

Query: 493 FERLDS 498
           FE + +
Sbjct: 447 FEEMKA 452


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 197/429 (45%), Gaps = 16/429 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F +N ++    R +Q ++A  LFD+M  RG + D  +Y+ LI  F + G  D A+
Sbjct: 160 WRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEAL 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              +++EQ  +     L   L +  R      + + +  ++K  G  P   AY  +++++
Sbjct: 220 ELFRELEQPDMYTHAALVKGLCDARRG----EEGLYMLQKMKELGWRPATRAYAALVDLW 275

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + +  +EA  ++ EM + G+ P  V+ + ++N Y    +   A+ VF  M    C  ++
Sbjct: 276 CREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNV 335

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAELFGEAIHL 251
            T N M+  +  +     A  L   MR+ G++P VV+YN L+R   + G  E    A  L
Sbjct: 336 WTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE---SAFRL 392

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            RLM+   +  +  TYN +I    K+ + ++A +L   ++ RGI PN++T++T+I    K
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMI-----VAYERVGLVAHAKRLLHELRQPNTI 366
            GK D A    +K+ S+G   D   Y   I         R GL +    +L +  +P+T+
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL-SFIDEMLQKDVKPSTV 511

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L +      AT ++ Q    G   D+  +   +  +    +      V  +M
Sbjct: 512 NYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEM 571

Query: 427 RSAGYFPDS 435
           +  G   D+
Sbjct: 572 KKGGIIVDA 580



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 196/453 (43%), Gaps = 39/453 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   YN ++R + R      A      M + G  PD +T+++LI  + +    D A  
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M     S D V Y+ LIE   +     +A+ +F  L+     PD+  +  ++    
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLC 241

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A+  +E   ++++M+E G +P T +Y+ L++L+    K  EA  +  EM +        
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           TC  +++ Y +      A R+F SM+  G +P+V +YN +++ +       +A+ L   M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEH--EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +   +E +VVTYN +I+  G+ ++   E A  L++ M+  G+  +  TY+ +I    K G
Sbjct: 362 RECGVEPDVVTYNLLIR--GQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           K+D A  LF  L   G+                               +PN++   T I 
Sbjct: 420 KVDEACSLFDGLEYRGI-------------------------------RPNSVTFNTVIN 448

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + G+ + A     +   AG   D   +   IE   + K     +   ++M      P
Sbjct: 449 GLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKP 508

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            +    +V++   K R +  A  ++ +M   GC
Sbjct: 509 STVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 134/286 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ YN +++      +   A  L D+MR+ G+ PD  TY+ LI     +G  +SA   
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ ME + ++ D   Y+ LI+   K     +A S+F  L+  GI P+ V +NT+IN   K
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F  A   +E+M   G  PDT +YS  +    +     E LS   EM + +       
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             I+ID   +      A R++  M  +G  P VV+Y T +R Y       EA ++   M+
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +  I  + + YNT+I  +    + + A  +++ M      PN  T+
Sbjct: 573 KGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/473 (20%), Positives = 203/473 (42%), Gaps = 21/473 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + P+  AY  ++    R ++ E A  + +EM   G+ P   T + ++  + +EG  
Sbjct: 257 KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRM 316

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   + M+      ++  Y+ +++    +    KA+++  +++  G+ PD+V YN +
Sbjct: 317 SGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLL 376

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I         + A  L+  M   G+  D  +Y+ L++   +  K  EA S+F  +     
Sbjct: 377 IRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             +  T N +I+     G+ D+A         M   G  P   +Y+  +    + +   E
Sbjct: 437 RPNSVTFNTVINGLCKGGKFDVACT---FLEKMVSAGCAPDTYTYSPFIENLCKTKGSRE 493

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            +     M +K+++ + V Y  +I    K   +  AT +  +M + G  P+ +TY+T + 
Sbjct: 494 GLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVR 553

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            +   G+L  A  +  +++  G+ +D + Y T+I  +  +G   HA  +L  +    ++P
Sbjct: 554 AYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMP 613

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                 IL R               +   +K  SV+   IEL       A+V E+FE M+
Sbjct: 614 NHFTFFILLRHLLQRRLA-------EDVPLKTTSVWK-TIEL-------ADVFELFELMK 658

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
                  +     +L  + + R  +    L S M+E+    ++ ++  +++ +
Sbjct: 659 KNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCF 711



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 21/409 (5%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+LD +  E    P V  YN+++R        E A  L   M   G+A D+YTY+ L
Sbjct: 353 KAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVL 411

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G  D A S    +E   +  + V ++ +I    K   +  A +   ++ S+G 
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD   Y+  I    K K  +E    I+EM ++ VKP TV+Y+ +++   +   +  A  
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++ +M  + C  D+ T    +  Y       +A+ +   M+K GI    ++YNTL+  + 
Sbjct: 532 IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTY--------------NTMIKIYG--KSLEHEKAT 284
                  A+ + + M       N  T+              +  +K     K++E     
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVF 651

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L + M+   +  +A  Y  I+  + +  +LD    L   ++   + ++  +Y +++  +
Sbjct: 652 ELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCF 711

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            ++ +   A  LL  +      PN I  +  ++     G+ + A  +FR
Sbjct: 712 CKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 198/436 (45%), Gaps = 12/436 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G   +AI
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ MEQ     D+V+Y+++I+   K    ++A ++FS++   GI PD+  Y ++++  
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +K    L+ +M    + PD V +ST+++   +  K  EA  +   M +     D+
Sbjct: 242 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 301

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   ++D +       +A ++F  M + G  P V+SY TL+  Y +     +A++LF  
Sbjct: 302 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 361

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RKE   +  TYNT++         + A  L  EM  RG  P+ +TYS ++    K   
Sbjct: 362 MCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH 421

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L+ A  L + + +S +  D  +Y  +I    R G +  A+ L   L      P+      
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR----NKKYANVIEVFEKM 426
            I  L + G + EA  +F +     +  D S  GC     +R    N +    I++ E+M
Sbjct: 482 MIHGLCKRGLLNEANKLFMEM----DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537

Query: 427 RSAGYFPDSHIIALVL 442
            + G+  D     L++
Sbjct: 538 LARGFSADVSTTTLLV 553



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 168/350 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF +M  +GI+PD +TY++L+        +
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L QM   ++  D+V++S +++   K    ++A  I   +   G+ PD+V Y T+
Sbjct: 248 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M  +G  PD +SY+TL+N Y + HK  +A+ +F EM     
Sbjct: 308 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N ++     +   +DA  LF  M   G  P +V+Y+ LL    +     EA+ 
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMA 427

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   +  ++  YN +I    ++ E E A +L   + ++G+ P+  TY+ +I    
Sbjct: 428 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 487

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G L+ A  LF ++  +    D   Y T+   + +      A +LL E+
Sbjct: 488 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/497 (21%), Positives = 215/497 (43%), Gaps = 4/497 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ +      P    ++ L+T   K   + + +S   QM+   V  ++   + LI     
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+    A S+ +++   G  PD   + T+I          EA  L ++M ++G +P+ V+
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +   M + NC  D+     +ID   +     +A  LF  M 
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P + +Y +L+        +     L   M   +I  +VV ++T++    K  +  
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  ++  M  RG+EP+ +TY+T++       ++D A  +F  +   G   D + Y T+I
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+ +    P+T    T +  L   GR+++A  +F +    G++
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +++   +N      + + + + ++   PD  +  ++++   +  E E A DL
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           +S +  +G   S   +  M+     R   N    LF  +D +        ++ +A  + +
Sbjct: 464 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523

Query: 518 ANRLNDASRIMNRMNKR 534
            N    A +++  M  R
Sbjct: 524 NNETLRAIQLLEEMLAR 540



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 4/401 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V  Y  ++  + +      A  L   M Q    PD   Y+++I    K+     A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +   QM    +S D+  Y++L+     L ++    ++ +++ +S I+PD+V ++T+++  
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA  +++ M ++GV+PD V+Y+TL++ +    +  EA+ VF  M       D+
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            +   +I+ Y ++     A  LF  M +    P   +YNTL+          +AI LF  
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  +    ++VTY+ ++    K+   E+A  L++ ++   + P+   Y+ II    +AG+
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L+ A  LF  L S G+      Y  MI    + GL+  A +L  E+   +  P       
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 516

Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           +AR          A  +  +    G   D+S    ++E+ S
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 200/454 (44%), Gaps = 4/454 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  +  +L ++ + K +     L  +M   G+ P+ YT + LI  F        A S 
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P++V Y T+IN   K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +PD V Y+++++   ++ +  EA ++F++M       D+ T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++     L   K    L   M    I P VV ++T++    +     EA  +  +M 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E +VVTY T++  +    E ++A  +   M  +G  P+ I+Y+T+I  + K  K+D
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+++       D   Y T++     VG +  A  L HE+    + P+ +     +
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   +EEA  + +    +    DI V+  +I+   R  +     ++F  + S G  
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           P      ++++   K      A+ L+ EM    C
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 7/309 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  ++ V+  + +  +   AH + D M QRG+ PD  TY+TL+     +   D A+  
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M +   + D++ Y+ LI    K+    KA+ +F  +     +PD   YNT+++    
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               ++A  L  EM  +G  PD V+YS LL+   +N    EA+++   +   N   D+  
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            NI+ID     G+L+ A+D   LF ++   G+ PSV +YN ++    +  L  EA  LF 
Sbjct: 444 YNIIIDGMCRAGELEAARD---LFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M   +   +  TYNT+ + + ++ E  +A  L++EM  RG   +  T + ++ +    G
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560

Query: 314 KLDRAAMLF 322
            LD+++   
Sbjct: 561 -LDQSSCFL 568



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 1/146 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+L  I E +  +P +  YN+++  + RA + E A  LF  +  +G+ P  +TY+ +I
Sbjct: 425 AMALLKAI-EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G+ + A     +M+ +  S D   Y+ +     + ++  +AI +   + + G  
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLI 147
            D+     ++ +     L + +  L+
Sbjct: 544 ADVSTTTLLVEMLSDDGLDQSSCFLM 569


>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 491

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 189/398 (47%), Gaps = 4/398 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L  +M+  G+ P    Y+ LI    + G    A + L +M    +  D   Y+ L+E   
Sbjct: 74  LLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLL 133

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             +    A  +  ++   G+  +   Y  +++ + +A   +++  ++ EM+  G++ DT 
Sbjct: 134 ARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTA 193

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            YSTL+ LY ++  + +A  +  EM EV   LD+   N +ID +G+     DA ++F  M
Sbjct: 194 GYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKM 253

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  GI P + ++N L+R +        A+     MQ + +  +   + T+I   G+  + 
Sbjct: 254 RGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKW 313

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++   L  +M+NRG + +   Y+ ++ I+G+ G    A      L++  +++ P ++  +
Sbjct: 314 DELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVL 373

Query: 341 IVAYERVGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
             AY + GL      +L     E  +PN +     I   + AGR  EA  VF+   D+G 
Sbjct: 374 ANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGM 433

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             D+  +  +++ F R K+Y  V EV+ +M  AG  PD
Sbjct: 434 SPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPD 471



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 163/359 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L  +L      LA  L  +M   G+A +R TY  L+  + + G  + +   
Sbjct: 120 PDAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWV 179

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M++  +  D   YS L+ L R    + KA  +   ++  G+  D+  YN +I+ FGK
Sbjct: 180 LGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGK 239

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +AR + E+MR QG+KPD  +++ L+  +        AL   A M E     D   
Sbjct: 240 YGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKI 299

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I+  G+     +   LF  MR  G   S   Y  L+ +YG+   F +A      ++
Sbjct: 300 FITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALK 359

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + ++ +   +  +   Y +    E+  +++Q M+  GIEPN +  + +I  +  AG+  
Sbjct: 360 AENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHL 419

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            A  +FQ ++ SG+  D V Y T++ A+ RV        +  E+ +    P   A  +L
Sbjct: 420 EAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDRKAREML 478



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/404 (22%), Positives = 177/404 (43%), Gaps = 39/404 (9%)

Query: 103 SDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
           SD ++++ + + ++++G+ P   AY  +I    +A    EA  L+ EMR  G++PD   Y
Sbjct: 66  SDLARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHY 125

Query: 163 ST-----------------------------------LLNLYVENHKFVEALSVFAEMNE 187
           +                                    LL+ Y    +  ++  V  EM  
Sbjct: 126 NALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKR 185

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
               LD    + ++ +Y    M K A  L   M+++G++  V  YN L+  +G+     +
Sbjct: 186 WGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLAD 245

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  M+ + I+ ++ T+N +I+ + +    ++A   +  MQ  G+ P+   + TII 
Sbjct: 246 ARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIIN 305

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             G+ GK D    LF K+R+ G +    +Y  ++  Y + G    A+  +  L+  N   
Sbjct: 306 KLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQL 365

Query: 368 RETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
             +   +LA A    G  E+   V +     G   ++ +   +I  FS   ++     VF
Sbjct: 366 SPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVF 425

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + ++ +G  PD      ++ ++ +++ +E   ++YSEM+  GC 
Sbjct: 426 QHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCT 469



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/310 (20%), Positives = 131/310 (42%), Gaps = 31/310 (10%)

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +L   M+  G+ PS  +Y  L+R    A    EA  L   M+   +  +   YN +++  
Sbjct: 73  QLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGL 132

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
                   A  L+ +M + G+  N  TY  ++  + +AG+L+ +  +  +++  G+ +D 
Sbjct: 133 LARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDT 192

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
             Y T++  Y   G+   A  L+ E+++                                
Sbjct: 193 AGYSTLVRLYRDSGMWKKATDLIMEMQE-------------------------------V 221

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   D+ ++  +I+ F +  + A+  ++FEKMR  G  PD      ++  + ++   + A
Sbjct: 222 GVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRA 281

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
               + MQEEG     ++   +++  G +  ++ L+ LF+++ +        ++ V+  I
Sbjct: 282 LRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDI 341

Query: 515 YERANRLNDA 524
           Y +     DA
Sbjct: 342 YGQYGHFRDA 351


>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
          Length = 1438

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 206/432 (47%), Gaps = 45/432 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++   +W+   +  +P+  A  VVL  + RA+Q  +A  +F  +R  G       ++ +
Sbjct: 172 RALDAFEWLARSS--APASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAM 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  + + G FD A   L  M  DR                                  GI
Sbjct: 228 MGVYARSGRFDDARQLLDTM-HDR----------------------------------GI 252

Query: 121 VPDLVAYNTMINVFGKAKLFKE--ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            PDLV++NT+IN   K+       A  L+ E+R+ G++PD ++Y+TL++   ++    +A
Sbjct: 253 DPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDA 312

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           ++VF +M    C  DL T N M+ V+G+   A++A+RLF  + + G  P  ++YN+LL  
Sbjct: 313 VTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYA 372

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +     +  H    + +   ++N +TYNTMI +YGK    + A  L  EM+  G  P+
Sbjct: 373 FAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPD 432

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR--- 355
           A+TY+ +I   GK  ++  A  + + +  +G++   + +  +I AY + G  A A+    
Sbjct: 433 AVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFD 492

Query: 356 -LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            ++    +P+ +     + + AR+G  E+   ++R+  +     D  ++  ++   ++  
Sbjct: 493 CMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552

Query: 415 KYANVIEVFEKM 426
           K   + EV + M
Sbjct: 553 KCEEIEEVIQDM 564



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 6/367 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            +N ++     +  +E A  +FD M + G  P   + + ++     +G  D     ++++ 
Sbjct: 783  WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEEL- 841

Query: 82   QD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            QD   ++S   VL   L++   K  D  + + I++ +K++G +P++  Y +MI++     
Sbjct: 842  QDMNFKISKSTVLL--LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899

Query: 139  LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             F++  L+I EM   G KPD    + LLN+Y     F     V+  + E     D  T N
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959

Query: 199  IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +I +Y +    ++   L   M K G+ P + SY +LL    +AEL  +A  +F  M+ K
Sbjct: 960  TLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSK 1019

Query: 259  EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
              + N   Y+ M+KIY  +  H KA NL+  M+  GIEP   T   ++  +G AG+   A
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREA 1079

Query: 319  AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
              +   L+SS +E+  + Y T+  AY + G   H    L E+++    P     T   RA
Sbjct: 1080 ENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139

Query: 379  GRIEEAT 385
              + E T
Sbjct: 1140 ASLCEQT 1146



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 155/340 (45%), Gaps = 6/340 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF--GEAIHLFRLM 255
           N M+ VY +     DA +L  +M   GIDP +VS+NTL+    ++     G A+ L   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  +  +V+TYNT+I    +S   E A  + ++M      P+  TY+ ++++ G+ GK 
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           + A  LF++L   G   D + Y +++ A+ + G V   +    +L +     N I   T 
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + GR++ A  ++ +    G   D   +  MI+   +  + A   +V E M  AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P     + ++ +Y K      A++ +  M   G       +  ML ++    D   +  
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLC 524

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L+ ++ +D+     +++ V+     + ++  +   ++  M
Sbjct: 525 LYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM 564



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 144/608 (23%), Positives = 250/608 (41%), Gaps = 101/608 (16%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A   P++ A++ ++    +  +   A   FD M   G+ PDR  Y  ++  F + G  +
Sbjct: 461  DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520

Query: 72   SAISWLQQMEQDRVSGDLVLYSNL-IELARK-----LSDYSKAISIFSRLKSSGIVPDLV 125
              +   ++M  D    D  +Y  L + LA++     + +  + + +  R+ + GI+  ++
Sbjct: 521  KMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRM-NLGIISTML 579

Query: 126  AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                 ++    AKL K+A L       QG KPD  S  +++N YV   K  E LS+   +
Sbjct: 580  IKARCVS--QGAKLLKKACL-------QGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630

Query: 186  NE-VNCPLDLTT-CNIMIDVYGQLDMAKDADRLFWSMRKM--GIDPSVVSYNTLLRVYGE 241
             E V+   DL + C+IM+    Q  ++       +S R M    D +   Y  L+    E
Sbjct: 631  CEHVSFSQDLISECSIMLLCRKQTSISAYEQ---YSQRLMLKYPDQNCNLYEYLITCLIE 687

Query: 242  AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            AE F EA  +F  MQ   IE +   Y ++I  Y K    E A  LM +    GI  N ++
Sbjct: 688  AEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILS 747

Query: 302  YSTII-AIWGKAGKLDRAAMLFQKLR-SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
               II   +GK     +A +L + LR +SG  ID  ++  +I AY   GL   A+ +   
Sbjct: 748  CRVIIIEAYGKIKLWQQAEILVKGLRQASG--IDRRIWNALIHAYAESGLYEKARAVFDN 805

Query: 360  LRQPNTIPRETAITILARA----GRIEEATWV----------------------FRQAFD 393
            + +   +P   ++  + RA    GR++E   V                      F +A D
Sbjct: 806  MIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGD 865

Query: 394  -------------AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
                         AG + ++ ++  MI L   + ++ +V  +  +M  AG+ PD  I+  
Sbjct: 866  VFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNA 925

Query: 441  VLNSYGKLREFETADDLYSEMQEEG---------------C-VFSDQVHFQMLSLYGARK 484
            +LN Y     F+    +Y  + E G               C  F  +  F +L+  G R 
Sbjct: 926  LLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRG 985

Query: 485  DFNMLES-------------------LFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
                L+S                   +FE + S S    + ++H++  IY  A   + A 
Sbjct: 986  LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045

Query: 526  RIMNRMNK 533
             ++  M +
Sbjct: 1046 NLLAVMKE 1053



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 187/436 (42%), Gaps = 8/436 (1%)

Query: 36   ELAHGLFDEMRQRGIAPDRYTYSTLIT-CFGKEGMFDSAISWLQQMEQDRVSG-DLVLYS 93
            E AH L D+  Q GI  +  +   +I   +GK  ++  A   ++ + Q   SG D  +++
Sbjct: 727  ETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQ--ASGIDRRIWN 784

Query: 94   NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
             LI    +   Y KA ++F  +  +G +P + + N M+          E  +++EE+++ 
Sbjct: 785  ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844

Query: 154  GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
              K    +   LL+ + +     E + ++  M       ++     MI +    +  +D 
Sbjct: 845  NFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDV 904

Query: 214  DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            + +   M   G  P +   N LL +Y  A  F     ++R +    +E +  TYNT+I +
Sbjct: 905  ELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVM 964

Query: 274  YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            Y +S   E+   L+ EM  RG+ P   +Y +++A   KA   ++A  +F+++RS   +++
Sbjct: 965  YCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLN 1024

Query: 334  PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFR 389
              +Y  M+  Y   G  + A+ LL  +++    P    + IL      AG+  EA  V  
Sbjct: 1025 RSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN 1084

Query: 390  QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                +        +  + + + +N  Y +      +M+  G  PD  +    + +     
Sbjct: 1085 NLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCE 1144

Query: 450  EFETADDLYSEMQEEG 465
            +   A  L   +Q+ G
Sbjct: 1145 QTADAILLLKSLQDCG 1160



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 223/523 (42%), Gaps = 25/523 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++    ++   E A  +F++M      PD +TY+ +++  G+ G  + A   
Sbjct: 291 PDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERL 350

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++ +     D + Y++L+    K  +  K      +L  +G   + + YNTMI+++GK
Sbjct: 351 FRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGK 410

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L +EMR  G  PD V+Y+ +++   + ++  EA  V  +M +      L  
Sbjct: 411 MGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIA 470

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  Y +     DA+  F  M   G+ P  ++Y  +L V+  +    + + L+R M 
Sbjct: 471 FSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMM 530

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-----NRGIEPNAITYSTIIAIWGK 311
                 +   Y  ++    K  + E+   ++Q+M+     N GI       ST++    K
Sbjct: 531 NDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGI------ISTMLI---K 581

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--- 368
           A  + + A L +K    G + D    ++++ AY           LL  + +  +  +   
Sbjct: 582 ARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLI 641

Query: 369 -ETAITILARAGRIEEATWVFRQAFDAG-EVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
            E +I +L R      A   + Q        ++ +++  +I      + ++   +VF  M
Sbjct: 642 SECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDM 701

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD-QVHFQMLSLYGARKD 485
           +  G      I   ++++Y KL   ETA  L  +  + G   +       ++  YG  K 
Sbjct: 702 QFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKL 761

Query: 486 FNMLESLFERLDSDSNINKK---ELHHVVA--GIYERANRLND 523
           +   E L + L   S I+++    L H  A  G+YE+A  + D
Sbjct: 762 WQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFD 804



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 140/292 (47%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P+ + Y ++I+       F      + +ME      DL + + L+ +  
Sbjct: 872  IYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYT 931

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               ++ +   ++  +  +G+ PD   YNT+I ++ ++   +E   L+ EM ++G+ P   
Sbjct: 932  AAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            SY +LL    +     +A  +F EM   +  L+ +  ++M+ +Y        A+ L   M
Sbjct: 992  SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG A    EA ++   ++   +E + + Y+T+   Y K+ ++
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDY 1111

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
               T  + EM+  G+EP+   ++  I       +   A +L + L+  G ++
Sbjct: 1112 NHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDL 1163



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/497 (19%), Positives = 214/497 (43%), Gaps = 21/497 (4%)

Query: 48   RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYS 106
            +G  PD  +  +++  +      +  +S L+ + E    S DL+   +++ L RK +  S
Sbjct: 598  QGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSIS 657

Query: 107  KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
                   RL       +   Y  +I    +A+ F EA  +  +M+  G++     Y +++
Sbjct: 658  AYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESII 717

Query: 167  NLYVENHKFVEALSVFAEMNEVNCPLDLTTCN-IMIDVYGQLDMAKDADRLFWSMRKM-G 224
            + Y +      A  +  +  +   PL++ +C  I+I+ YG++ + + A+ L   +R+  G
Sbjct: 718  STYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASG 777

Query: 225  IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
            ID  +  +N L+  Y E+ L+ +A  +F  M +      V + N M++        ++  
Sbjct: 778  IDRRI--WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835

Query: 285  NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
             +++E+Q+   + +  T   ++  + KAG +     ++  ++++G   +  LY++MI   
Sbjct: 836  VVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI--- 892

Query: 345  ERVGLVAHAKR------LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
                L+ H  R      ++ E+     +P+       + +   AG  +  T V+R   +A
Sbjct: 893  ---SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEA 949

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            G   D   +  +I ++ R+ +      +  +M   G  P       +L +  K    E A
Sbjct: 950  GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQA 1009

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
            D ++ EM+ +    +  ++  M+ +Y    + +  E+L   +  D         H++   
Sbjct: 1010 DQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069

Query: 515  YERANRLNDASRIMNRM 531
            Y  A +  +A  ++N +
Sbjct: 1070 YGTAGQPREAENVLNNL 1086



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 95/215 (44%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            EA   P    YN ++    R+ + E    L +EM +RG+ P   +Y +L+    K  + +
Sbjct: 948  EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    ++M       +  +Y  ++++ R   ++SKA ++ + +K  GI P +   + ++
Sbjct: 1008 QADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILM 1067

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              +G A   +EA  ++  ++   ++  T+ YST+ + Y++N  +    +   EM      
Sbjct: 1068 TSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVE 1127

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             D       I      +   DA  L  S++  G D
Sbjct: 1128 PDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/284 (18%), Positives = 122/284 (42%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y  ++  +    ++     +  EM   G  PD    + L+  +   G FD 
Sbjct: 879  AGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDR 938

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                 + + +  +  D   Y+ LI +  +     +  ++ + +   G+ P L +Y +++ 
Sbjct: 939  TTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLA 998

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               KA+L ++A  + EEMR +  + +   Y  ++ +Y       +A ++ A M E     
Sbjct: 999  ASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP 1058

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + T +I++  YG     ++A+ +  +++   ++ S + Y+T+   Y +   +       
Sbjct: 1059 TIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKL 1118

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+R  +E +   +   I+      +   A  L++ +Q+ G +
Sbjct: 1119 LEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/246 (19%), Positives = 103/246 (41%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A + P +   N +L     A  ++    ++  + + G+ PD  TY+TLI  + +    
Sbjct: 912  EGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRP 971

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   + L +M +  ++  L  Y +L+  + K     +A  IF  ++S     +   Y+ M
Sbjct: 972  EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            + ++  A    +A  L+  M+E G++P   +   L+  Y    +  EA +V   +   + 
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +     + + D Y +             M++ G++P    +   +R     E   +AI 
Sbjct: 1092 EVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAIL 1151

Query: 251  LFRLMQ 256
            L + +Q
Sbjct: 1152 LLKSLQ 1157


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 8/389 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P V  YN +L  + +  +   A  LF  M   GI P   TY+TLI  F K   F+
Sbjct: 69  ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 128

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A   LQ M   + S  +  Y ++I    K     +A  +F  +K +G  PD V YNT+I
Sbjct: 129 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 188

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +     +   EA+ L+  M E   +PD ++++ L+       +  EA  +F  M +  C 
Sbjct: 189 HGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP-SVVSYNTLLRVYGEAELFGEAIH 250
            DL T  +++    +L + +        +R     P +V+ Y  + R  G    F  A  
Sbjct: 249 PDLVTHTVLVS---KLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAAR 305

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M R+ +  NVVTY    K  G   E  +A    + M  +GIEP+ + Y+ ++  + 
Sbjct: 306 LLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFC 365

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           KA +LD A  + + +  SG+  + V Y T++  + R G V     LLH +    RQP+  
Sbjct: 366 KANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVA 425

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAG 395
              T +  L R G+++ A      A   G
Sbjct: 426 TWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 2/348 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +PS   Y  ++    +  Q+E A+GL   M  R  +P  Y+Y ++I    K    
Sbjct: 103 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 162

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++M+      D V Y+ LI          +A  + + +  +   PD + +  +
Sbjct: 163 DQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTAL 222

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I         KEA +L + M +QG  PD V+++ L++      K   ALSV    N   C
Sbjct: 223 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVV--RNYPAC 280

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P  +     +    G+      A RL   M + G+ P+VV+Y    +  G+ +    A  
Sbjct: 281 PEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYR 340

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR M  + IE ++V YN ++  + K+   + A  +++ M   G+ PN +TY+T++    
Sbjct: 341 EFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 400

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           + GK++    L   + S G + D   + T++    RVG V  A   L+
Sbjct: 401 RKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 26/393 (6%)

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           Q  KP+ +SY  L+       K  +A S  AEM       D+ T N++ID   +      
Sbjct: 4   QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISR 63

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A   F +M     +P VV+YNTLL    +     +A  LF  M+   I  + VTY T+I 
Sbjct: 64  AIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLID 119

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
           ++ K  + E A  L+Q M +R   P   +Y +II    K  K+D+A  LF++++ +G + 
Sbjct: 120 VFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKP 179

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELR-----------QPNTIPRETAITILARAGRI 381
           D V Y T+I      GL    K+ LHE +           QP+ I     I  L    RI
Sbjct: 180 DRVTYNTLI-----HGLC--VKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRI 232

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-AL 440
           +EA  +F+     G   D+     ++      +K    + V   +R+    P++ I+   
Sbjct: 233 KEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV---VRNYPACPEAVILYTP 289

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           +    G+ R F+ A  L  +M   G   +   +       G  K+       F R+    
Sbjct: 290 IFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQG 349

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                  ++V+   + +ANRL+ A +++  M++
Sbjct: 350 IEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQ 382



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 156/380 (41%), Gaps = 14/380 (3%)

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y  L++   +     KA S  + +    +VPD+  YN +I+   KA+    A    E M 
Sbjct: 13  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 72

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMIDVYGQLDMA 210
           E    PD V+Y+TLL    +N +  +A S+F  M      P D+T    +IDV+ ++   
Sbjct: 73  E----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTY-TTLIDVFCKMCQF 127

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           + A  L   M      P+V SY +++    +     +A  LF  M+    + + VTYNT+
Sbjct: 128 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 187

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I          +A +L+  M     +P+ IT++ +I       ++  A +LFQ +   G 
Sbjct: 188 IHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 247

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI--TILARAGR---IEEAT 385
             D V +  ++    ++ +    +  L  +R     P    +   I    GR    + A 
Sbjct: 248 APDLVTHTVLV---SKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            + ++    G   ++  +    +     K+       F +M   G  PD     ++++ +
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    + A+ +   M + G
Sbjct: 365 CKANRLDMAEKMVRYMDQSG 384


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 211/436 (48%), Gaps = 10/436 (2%)

Query: 26  LRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           L NVL  K +   AH +F+ +   G  P   TY+TL+    ++ +F S +  + ++E++ 
Sbjct: 19  LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  D +L++++I    +  +  +A+ +F ++K SG  P    +NT+I  +G A   +EA 
Sbjct: 79  MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            L+E +++ GVKP+  +Y+ L+  +       EA ++  +M       D  T N +   Y
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG-EAELFGEAIHLFRLMQRKEIEQN 263
            +      A+ +   M    + P+  + + ++  Y  E  +   +  +FR M+   +  N
Sbjct: 199 AEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFR-MKELGVLPN 257

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           +  +N++IK +  +++ E    ++  M+  G+ P+ +T+STI+  W  AG++D+   +F 
Sbjct: 258 LFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN 317

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG 379
            +  + +E D   +  +   Y R G    A+ +L  +R+    PN +   T I+    AG
Sbjct: 318 DMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAG 377

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           ++E A  V+ +  + G   ++  +  +I  +   K+     E+ + M   G FP    + 
Sbjct: 378 KMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQ 437

Query: 440 LVLNSY---GKLREFE 452
           L+ +++   G L E E
Sbjct: 438 LIADAWRAIGLLSESE 453



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 193/411 (46%), Gaps = 40/411 (9%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A SIF+ L   G  P L+ Y T++    + KLFK    LI ++ E G+KPD++ +++++
Sbjct: 31  EAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSII 90

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           N + E+    EA+ +F +M E  C    +T N +I  YG     ++A +L   ++  G+ 
Sbjct: 91  NAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVK 150

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P+  +YN L+R +   E   EA ++   M    ++ + VTYNT+ + Y +  E  +A  +
Sbjct: 151 PNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEM 210

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKL-DRAAMLFQK--------------------- 324
           + EM NR + PN  T S I+  + K G + D +  +F+                      
Sbjct: 211 ILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLD 270

Query: 325 -------------LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
                        +  +GV  D V + T++ A+   G +   K + +++ +    P   A
Sbjct: 271 TMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHA 330

Query: 372 ITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            +ILA    RAG  E+A  +       G   ++ +   +I  +    K  + ++V+EKM 
Sbjct: 331 FSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMC 390

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
             G  P+      ++  YG+ ++   A++L   M+E+G VF  +   Q+++
Sbjct: 391 EIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKG-VFPKKGTMQLIA 440



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 178/370 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P    +N ++     +   + A  LF +M++ G  P   T++TLI  +G  G  
Sbjct: 75  EENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKT 134

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  L+ ++   V  +   Y+ L+       +  +A ++  ++ +SG+ PD V YNT+
Sbjct: 135 EEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTL 194

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
              + +      A  +I EM  + V P+  + S ++N Y +    V+A      M E+  
Sbjct: 195 ARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGV 254

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L   N +I  +      +  D +   M + G+ P VV+++T++  +  A    +   
Sbjct: 255 LPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKE 314

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M + EIE ++  ++ + K Y ++ E EKA +++  M+  G+ PN +  +T+I+ W 
Sbjct: 315 IFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWC 374

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            AGK++ A  +++K+   GV  +   Y+T+I  Y        A+ LL  + +    P++ 
Sbjct: 375 SAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKG 434

Query: 371 AITILARAGR 380
            + ++A A R
Sbjct: 435 TMQLIADAWR 444



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 149/306 (48%), Gaps = 6/306 (1%)

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           S + L+N+ +   K  EA S+F  + +      L T   ++    +  + K   RL   +
Sbjct: 15  SRTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKV 74

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            + G+ P  + +N+++  + E+    EA+ LFR M+    +    T+NT+IK YG + + 
Sbjct: 75  EENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKT 134

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  L++ +Q+ G++PN  TY+ ++  W     ++ A  +  K+ +SG++ D V Y T+
Sbjct: 135 EEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTL 194

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT-WVFRQAFDAG 395
             AY   G    A+ ++ E+      P E   +I+     + G + +A+ +VFR   + G
Sbjct: 195 ARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMK-ELG 253

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
            + ++ VF  +I+ F        V EV   M   G  PD    + ++N++      +   
Sbjct: 254 VLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCK 313

Query: 456 DLYSEM 461
           +++++M
Sbjct: 314 EIFNDM 319



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 52/114 (45%)

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           R   + +L   G+  EA  +F    D G    +  +  ++   +R K + +++ +  K+ 
Sbjct: 16  RTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVE 75

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
             G  PDS +   ++N++ +    + A  L+ +M+E GC  +      ++  YG
Sbjct: 76  ENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYG 129



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 5/186 (2%)

Query: 356 LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           L+ E  +P  I   T +  L R    +    +  +  + G   D  +F  +I  FS +  
Sbjct: 39  LMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGN 98

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               +++F KM+ +G  P +     ++  YG   + E A  L   +Q+ G V  +Q  + 
Sbjct: 99  MKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG-VKPNQRTYN 157

Query: 476 MLSLYGARKDFNMLES---LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           +L      K+ NM E+   +++ + S    +    + +     E+   +     I+  +N
Sbjct: 158 ILVRAWCNKE-NMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLN 216

Query: 533 KRRTFN 538
           +R T N
Sbjct: 217 RRVTPN 222


>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 807

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/602 (22%), Positives = 259/602 (43%), Gaps = 76/602 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ I +W  ++  Y  +V  YN++   + + ++W     L++EM   G+ P   TY TL
Sbjct: 124 RALMIFEWFKQKGCYELNVIHYNIMFWILGKERKWRFLESLWNEMNANGVLPVNSTYGTL 183

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR------ 114
           I  + K G  + A+ WLQ+M    +  D V    +++L ++  ++ KA   F +      
Sbjct: 184 IDVYSKSGFKEEALGWLQRMLSQGMEPDEVTMGVVVQLYKRAREFQKAEEFFRKWSRGEP 243

Query: 115 ------------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                             +    +  +   YNT+I+++GKA   +    +  +M +QGV 
Sbjct: 244 LVIAIDHNTVDVRHVCNEVSHVNVCLNSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVA 303

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P TV+++T+++LY  + +  E   +   M E+ CP D  T NI+I V  + +  K A + 
Sbjct: 304 PTTVTFNTMIHLYGNHGRIREVSLLLQRMEELRCPPDTRTYNILISVLVKHNNIKLAAKY 363

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ---------------RKEIE 261
              M++  ++P +VSY TLL  Y   ++  EA  L R M                R  +E
Sbjct: 364 LMKMKEAFLEPDLVSYRTLLYAYSTRKMVQEAEELVREMDERGLKIDEFTQAALTRMYVE 423

Query: 262 QNVV-------------------TYNTMIKIYGK---SLEHEKATNLMQEMQNRGIEPNA 299
            N++                    Y   I  YG+   +LE EK     ++ +   +    
Sbjct: 424 SNMLEQSWLWFRRFHVAGNITSSCYCANIDAYGEQGYTLEAEKVFMCCKQKKKLSV---- 479

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + ++ +I  +G     D+A  LF  +   G+  +   Y ++I           AK  L++
Sbjct: 480 LVFNVMIKAYGIGKCYDKACQLFDSMEKFGIVANECSYSSLIHILASADKPHIAKPYLNK 539

Query: 360 LRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +++     + I     I+   +  +++ A  ++ +        D  ++  +I  F+    
Sbjct: 540 MQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIGHTVKPDAIIYSVLINAFADVGN 599

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ---EEGCVFSDQV 472
                   ++MR+AG+  +  I   ++  Y K+   + A   Y+ +Q   +   VFS   
Sbjct: 600 VIKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIGYLKEAQQTYTLLQSLDQAPSVFSSNC 659

Query: 473 HFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
              M+ LY  R      + +FE L  + NI  +  + ++  +Y++  RL++A +I  +M 
Sbjct: 660 ---MIDLYTERLMVEQAKEIFESLKKN-NIANEFSYAMMLCMYKKIGRLDEAFQIAKQMR 715

Query: 533 KR 534
           K+
Sbjct: 716 KQ 717



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 231/517 (44%), Gaps = 59/517 (11%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN ++    +A Q +  + +F +M ++G+AP   T++T+I  +G  G        LQ+M
Sbjct: 273 TYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRM 332

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E+ R   D   Y+ LI +  K ++   A     ++K + + PDLV+Y T++  +   K+ 
Sbjct: 333 EELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMKEAFLEPDLVSYRTLLYAYSTRKMV 392

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  L+ EM E+G+K D  + + L  +YVE++   ++   F   +          C   
Sbjct: 393 QEAEELVREMDERGLKIDEFTQAALTRMYVESNMLEQSWLWFRRFHVAGNITSSCYC-AN 451

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID YG+     +A+++F   ++     SV+ +N +++ YG  + + +A  LF  M++  I
Sbjct: 452 IDAYGEQGYTLEAEKVFMCCKQKK-KLSVLVFNVMIKAYGIGKCYDKACQLFDSMEKFGI 510

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             N  +Y+++I I   + +   A   + +MQ  G+  + I Y  +I+ + K  +LD A  
Sbjct: 511 VANECSYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEE 570

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILA 376
           L+ ++    V+ D ++Y  +I A+  VG V  A   L  +R    +  +    + + +  
Sbjct: 571 LYIEMIGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMRNAGFVGNQAIYNSLMKLYT 630

Query: 377 RAGRIEEA--TWVFRQAFDAGEVKDISVFG--CMIELFSRNKKYANVIEVFE-------- 424
           + G ++EA  T+   Q+ D       SVF   CMI+L++         E+FE        
Sbjct: 631 KIGYLKEAQQTYTLLQSLDQAP----SVFSSNCMIDLYTERLMVEQAKEIFESLKKNNIA 686

Query: 425 --------------------------KMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
                                     +MR  G   D      VL  Y   R    A + +
Sbjct: 687 NEFSYAMMLCMYKKIGRLDEAFQIAKQMRKQGLLTDLLSYNNVLGLYSMDRRLREAKETF 746

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
            EM E G      +H+ +     ++ +  MLE + +R
Sbjct: 747 KEMIESG------IHYGV-----SKHNIGMLEVMVKR 772



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 1/278 (0%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           SV  +NV+++     K ++ A  LFD M + GI  +  +YS+LI           A  +L
Sbjct: 478 SVLVFNVMIKAYGIGKCYDKACQLFDSMEKFGIVANECSYSSLIHILASADKPHIAKPYL 537

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M++  +  D +LY  +I    KLS    A  ++  +    + PD + Y+ +IN F   
Sbjct: 538 NKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIGHTVKPDAIIYSVLINAFADV 597

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               +A   ++ MR  G   +   Y++L+ LY +     EA   +  +  ++    + + 
Sbjct: 598 GNVIKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIGYLKEAQQTYTLLQSLDQAPSVFSS 657

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N MID+Y +  M + A  +F S++K  I  +  SY  +L +Y +     EA  + + M++
Sbjct: 658 NCMIDLYTERLMVEQAKEIFESLKKNNI-ANEFSYAMMLCMYKKIGRLDEAFQIAKQMRK 716

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           + +  ++++YN ++ +Y       +A    +EM   GI
Sbjct: 717 QGLLTDLLSYNNVLGLYSMDRRLREAKETFKEMIESGI 754



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 35/233 (15%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA        Y  V+ + ++  Q ++A  L+ EM    + PD   YS LI  F   G  
Sbjct: 541 QEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIGHTVKPDAIIYSVLINAFADVGNV 600

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A  +L +M      G+  +Y++L++L  K+    +A   ++ L+S    P + + N M
Sbjct: 601 IKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIGYLKEAQQTYTLLQSLDQAPSVFSSNCM 660

Query: 131 INVFGKAKLFKEARLLIE----------------------------------EMREQGVK 156
           I+++ +  + ++A+ + E                                  +MR+QG+ 
Sbjct: 661 IDLYTERLMVEQAKEIFESLKKNNIANEFSYAMMLCMYKKIGRLDEAFQIAKQMRKQGLL 720

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI-MIDVYGQLD 208
            D +SY+ +L LY  + +  EA   F EM E      ++  NI M++V  + D
Sbjct: 721 TDLLSYNNVLGLYSMDRRLREAKETFKEMIESGIHYGVSKHNIGMLEVMVKRD 773


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 224/494 (45%), Gaps = 38/494 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           ++Y ++++ +  AK    A  LF  M++ G +P+   ++ LI+   K G    A      
Sbjct: 254 YSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q+ V   ++ Y+ +I    KL   + A+ I   ++ +G  PD   YNT+I      K 
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT 373

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            +EA  L+    ++G  P  V+++ L+N Y    KF +AL +  +M    C LDL     
Sbjct: 374 -EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I+   + D  K+A  L   +   G+ P+V++Y +++  Y ++     A+ + ++M+R  
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            + N  TYN+++    K  +  KA  L+ +MQ  GI PN ITY+T++         D A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 320 MLFQKLRSSGVEID--------------------------------PVLYQTMIVAYERV 347
            LF+ +  +G++ D                                 V Y T+I  + + 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 348 GLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A    +R++ E   P++      +  L +  R+ EA  +  Q    G    I  +
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   R  K+ +   ++ +M S+G+ P +    + +NSY K    E A+DL  +M+ 
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 464 EGCVFSDQVHFQML 477
           EG V  D V + +L
Sbjct: 733 EG-VAPDVVTYNIL 745



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/519 (22%), Positives = 227/519 (43%), Gaps = 37/519 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN ++++  +      AH  F  + + G+ P+ +T + L+  + + G    A   
Sbjct: 181 PDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M       +   Y+ LI+   +     +A+ +F  +K  G  P++ A+  +I+   K
Sbjct: 241 FLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCK 300

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +    +ARLL + M + GV P  ++Y+ ++  Y +  +  +AL +   M +  C  D  T
Sbjct: 301 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 197 CNIMIDVYGQLDM-AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N +I  YG  D   ++A+ L  +  K G  P+VV++  L+  Y  AE F +A+ +   M
Sbjct: 361 YNTLI--YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              + + ++  +  +I    K    ++A  L+ E+   G+ PN ITY++II  + K+GK+
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A  + + +   G + +   Y +++    +   +  A  LL ++++   IP     T L
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + G+ +E        FD                        N   +FE M   G  PD 
Sbjct: 539 LQ-GQCDE------HDFD------------------------NAFRLFEMMEQNGLKPDE 567

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           H  A++ ++  K    E A   YS +  +G   +   +  ++  +    + +   +L ER
Sbjct: 568 HAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +  +        + V+     +  RLN+A  I+++M+ R
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 205/469 (43%), Gaps = 33/469 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YN ++  +++ K+   A  L  +M++ GI P+  TY+TL+     E  FD+A   
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + MEQ+ +  D   Y+ L +   K     +A S   R    G+    V Y T+I+ F K
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A  LIE M ++G  PD+ +YS LL+   +  +  EAL +  +M+       +  
Sbjct: 612 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 671

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             I+ID     G+ D AK   R++  M   G  PS  +Y   +  Y +     +A  L  
Sbjct: 672 YTILIDEMLREGKHDHAK---RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+R+ +  +VVTYN +I   G     ++A + ++ M     EPN  TY  ++    K G
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-G 787

Query: 314 KLDRAAMLFQKLRSSG----VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            L       + + +SG    +E+D + +Q +             +R++     P      
Sbjct: 788 NL----AYVRSVDTSGMWNLIELD-ITWQLL-------------ERMVKHGLNPTVTTYS 829

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I    +AGR+EEA  +       G   +  ++  +I+     K +   +     M   
Sbjct: 830 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 889

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           G+ P      L++       +FE    L+ ++ E G    D+V +++L+
Sbjct: 890 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILN 937



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/566 (20%), Positives = 217/566 (38%), Gaps = 92/566 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + YN ++  +   K  E A  L +   + G  P   T++ LI  +     FD A+  
Sbjct: 356 PDDWTYNTLIYGLCDQKTEE-AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M   +   DL ++  LI    K     +A  + + + ++G+VP+++ Y ++I+ + K
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474

Query: 137 A-----------------------------------KLFKEARLLIEEMREQGVKPDTVS 161
           +                                   K   +A  L+ +M++ G+ P+ ++
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA-------- 213
           Y+TLL    + H F  A  +F  M +     D     ++ D   +   A++A        
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKG 594

Query: 214 ---DRLFWS---------------------MRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
               +++++                     M   G  P   +Y+ LL    + +   EA+
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 654

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +   M  + I+  +  Y  +I    +  +H+ A  +  EM + G +P+A TY+  I  +
Sbjct: 655 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 714

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPN- 364
            K G+L+ A  L  K+   GV  D V Y  +I     +G +  A    KR++    +PN 
Sbjct: 715 CKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNY 774

Query: 365 -------------TIPRETAITILARAGRIE-EATW-VFRQAFDAGEVKDISVFGCMIEL 409
                         +    ++        IE + TW +  +    G    ++ +  +I  
Sbjct: 775 WTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 834

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           F +  +      + + M   G  P+  I  L++      + FE A    S M E  C F 
Sbjct: 835 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE--CGFQ 892

Query: 470 DQVHFQMLSLYGA--RKDFNMLESLF 493
            Q+    L + G     DF  ++SLF
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLF 918



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 168/400 (42%), Gaps = 15/400 (3%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
           N  + A  +   + AI    R  S+ +      YN  +    +  + +    +  ++ + 
Sbjct: 118 NCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQD 177

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+ PDTV+Y+T++  Y +      A   F  + E     +  TCN ++  Y +    + A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M  MG   +  SY  L++   EA+   EA+ LF +M+R     NV  +  +I  
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             KS     A  L   M   G+ P+ +TY+ +I  + K G+++ A  + + +  +G   D
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 334 PVLYQTMIVAYERVGLVAH----AKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT 385
              Y T+I      GL       A+ LL+   +    P     T L      A + ++A 
Sbjct: 358 DWTYNTLI-----YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +  +   +    D+ VFG +I    +  +     E+  ++ + G  P+      +++ Y
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
            K  + + A ++   M+ +GC  +   +  +  +YG  KD
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSL--MYGLVKD 510



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 21/336 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + Y+V+L  + + K+   A  + D+M  RGI    + Y+ LI    +EG  D A  
Sbjct: 631 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 690

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M           Y+  I    K      A  +  +++  G+ PD+V YN +I+  G
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  A   ++ M     +P+  +Y  LL +L   N  +V ++      N +   LD+
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE--LDI 808

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T                   +L   M K G++P+V +Y++L+  + +A    EA  L   
Sbjct: 809 TW------------------QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 850

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  N   Y  +IK    +   EKA + +  M   G +P   +Y  ++      G 
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            ++   LF  L   G   D V ++ +     + G V
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS   Y V + +  +  + E A  L  +M + G+APD  TY+ LI   G  G  D A 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAI---------------SIFSRLKSS 118
           S L++M       +   Y  L++ L +    Y +++                +  R+   
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P +  Y+++I  F KA   +EA LL++ M  +G+ P+   Y+ L+    +   F +A
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 179 LSVFAEMNEVN 189
           LS  + M+E  
Sbjct: 880 LSFVSIMSECG 890


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 212/445 (47%), Gaps = 6/445 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P++   N ++  +    +   A  L D M + G  P+  TY  ++    K G   
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L++ME+ ++  D V YS +I+   K      A ++F+ ++  G   D++ Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F  A  + +   L+ +M ++ + PD V++S L++ +V+  K  EA  +  EM +    
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   +ID + + +    A+ +   M   G  P++ ++N L+  Y +A L  + + L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  + VTYNT+I+ + +  + E A  L QEM +R + P+ ++Y  ++     
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+ ++A  +F+K+  S +E+D  +Y  +I        V  A  L   L     +P+   
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G + EA  +FR+  + G   +   +  +I             ++ E+++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589

Query: 428 SAGYFPDSHIIALVLN--SYGKLRE 450
             G+  D+  + +V++  S G+L++
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKK 614



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 216/492 (43%), Gaps = 39/492 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  P +  ++ +   V R KQ++L   L  +M  +GIA + YT S +I C  +      
Sbjct: 66  SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S + ++ +     D V +S LI         S+A+ +  R+   G  P L+  N ++N
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                    +A LLI+ M E G +P+ V+Y  +L +  ++ +   A+ +  +M E    L
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    +I+ID   +     +A  LF  M   G    ++ Y TL+R +  A  + +   L 
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M +++I  +VV ++ +I  + K  +  +A  L +EM  RGI P+ +TY+++I  + K 
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 313 GKLDRAAM-----------------------------------LFQKLRSSGVEIDPVLY 337
            +LD+A                                     LF+K+   GV  D V Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425

Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I  +  +G +  AK L  E+     +P+ +  +  +  L   G  E+A  +F +   
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +    DI ++  +I       K  +  ++F  +   G  PD     +++    K      
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 454 ADDLYSEMQEEG 465
           AD L+ +M+E+G
Sbjct: 546 ADLLFRKMEEDG 557



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 172/355 (48%), Gaps = 6/355 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE +       Y++++  + +    + A  LF+EM  +G   D   Y+TLI  F   G +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L+ M + +++ D+V +S LI+   K     +A  +   +   GI PD V Y ++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K     +A  +++ M  +G  P+  +++ L+N Y + +   + L +F +M+    
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
             D  T N +I  + +L   + A  LF  M    + P +VSY  LL      GE E   +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE---K 475

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  +++ ++E ++  YN +I     + + + A +L   +  +G++P+  TY+ +I 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
              K G L  A +LF+K+   G   +   Y  +I A+   G    + +L+ E+++
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 183/395 (46%), Gaps = 4/395 (1%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q+M + R    L+ +S L  +  +   Y   + +  +++  GI  +L   + M
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   + +    A   + ++ + G +PDTV++STL+N      +  EAL +   M E+  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L T N +++         DA  L   M + G  P+ V+Y  +L+V  ++     A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L R M+ ++I+ + V Y+ +I    K    + A NL  EM+ +G + + I Y+T+I  + 
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
            AG+ D  A L + +    +  D V +  +I  + + G +  A+ L  E+ Q    P+T+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I    +  ++++A  +       G   +I  F  +I  + +     + +E+F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              G   D+     ++  + +L + E A +L+ EM
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 60/131 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+++    +  YN+++  +  A + + A  LF  +  +G+ PD  TY+ +I    K+G  
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    ++ME+D  S +   Y+ LI       D +K+  +   +K  G   D      +
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603

Query: 131 INVFGKAKLFK 141
           +++    +L K
Sbjct: 604 VDMLSDGRLKK 614



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 24/272 (8%)

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           ++ + A +L QEM      P  I +S + ++  +  + D    L +++   G+  +    
Sbjct: 51  IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110

Query: 338 QTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             MI    R   ++ A     +++    +P+T+   T I  L   GR+ EA  +  +  +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G    +     ++     N K ++ + + ++M   G+ P+      VL    K  +   
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVA 512
           A +L  +M+E   +  D V + ++ + G  KD +        LD+  N+ N+ E+    A
Sbjct: 231 AMELLRKMEERK-IKLDAVKYSII-IDGLCKDGS--------LDNAFNLFNEMEIKGFKA 280

Query: 513 GI---------YERANRLNDASRIMNRMNKRR 535
            I         +  A R +D ++++  M KR+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 5/423 (1%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            R+ PSV  YN ++  + +  + E+A  L  EM   G+ P+  +YS +I      G  + 
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A +   QM       ++  ++ LI+         +A+ ++  +   G  P++VAYNT+I+
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                   +EA  + ++M+  G  P+  +YS L++ + ++   V A   +  M    C  
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++ T   M+DV  +  M   A+ L   M   G  P+ +++NT ++          A+ L 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             MQ      N+ TYN ++    +  ++E+A  L QE++ R ++PN +TY+T++  + +A
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-----QPNTIP 367
           G +  A  LF K    G   D + Y TMI AY + G V  A +L+  +       P+ I 
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             + I        IEEA     +A + G   + + +  ++  F  +  +   I + + + 
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657

Query: 428 SAG 430
             G
Sbjct: 658 RKG 660



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 207/457 (45%), Gaps = 18/457 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN +L  +L   ++++ + L+  M++ G+ P+ +TY+ L+    K    D+A   
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M       D V Y+ ++    K      A  +  R K     P +  YN +I+   K
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               + A  L+ EM + GV P+ VSYS ++N    +     A ++FA+M    C  ++ T
Sbjct: 257 EGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316

Query: 197 CNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              +I    + G+L  A D  +L   M + G +P+VV+YNTL+          EA+ +  
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKL---MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQR     NV TY+ +I  + KS +   A+     M + G  PN +TY+ ++ +  K  
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-- 371
             D+A  L +K+   G   + + + T I      G V  A +LL  ++    +P  T   
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 372 --ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             +  L R  + EEA  +F++        ++  +  ++  FSR       +++F K    
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDL---YSEMQE 463
           G  PDS     ++++Y K  + + A  L    S M+E
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/512 (23%), Positives = 207/512 (40%), Gaps = 69/512 (13%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TY  +I   G+E   D     LQQM+ D ++    L+  +I   +++    +A+ +F R+
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
              G  P +  YN +++       F+    L   M++ G+ P+  +Y+ LL    +N + 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKD-------------------- 212
             A  +F EM+   CP D  T   M+      G++D A++                    
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 213 -------ADRLFWSMRKMGIDPSVVSYNTL---LRVYGEAEL------------------ 244
                  A +L   M   G+DP+VVSY+ +   L V G  EL                  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 245 --------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
                           EA+ L++LM +   E NVV YNT+I     +   E+A  +  +M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           Q  G  PN  TYS +I  + K+G L  A+  + ++ S G   + V Y  M+    +  + 
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A  L+ ++      PNT+   T I  L   GR+E A  +  +    G + +I+ +  +
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           ++   R  KY     +F+++ +    P+      VL  + +      A  L+ +    G 
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
                 +  M+  Y  +    +   L ER+ S
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 48/353 (13%)

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M+ +NC  DL  C  +I+ Y ++  A+ A ++F+ + + G  P+V  YN LL       
Sbjct: 101 KMDGINCCEDLFIC--IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDA----- 153

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L  E  + F+++                              L   M+  G+ PN  TY+
Sbjct: 154 LLSE--NKFQMINP----------------------------LYTNMKKDGLIPNVFTYN 183

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            ++    K  ++D A  LF ++ + G   D V Y TM+ +  + G +  A+ L    + P
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-P 242

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +       I  + + GRIE A  +  +  D G   ++  + C+I     +        +F
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 424 EKMRSAGYFPDSHIIALVLNSY---GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            +M   G   + H    ++      GKL E   A DL+  M ++GC   + V +  L ++
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYE---ALDLWKLMIQDGCE-PNVVAYNTL-IH 357

Query: 481 GARKDFNMLESL--FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           G   + ++ E+L   +++     +     + ++   + ++  L  AS   NRM
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 12  EAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EAR   P++  YN VL    RA     A  LF +   RG APD  TY+T+I  + K+G  
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 71  DSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
             A   ++++   +    D++ Y++LI  A    +  +A++   +  + GI P+   +N 
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635

Query: 130 MINVF 134
           ++  F
Sbjct: 636 LVRCF 640


>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
          Length = 1435

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 206/432 (47%), Gaps = 45/432 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++   +W+   +  +P+  A  VVL  + RA+Q  +A  +F  +R  G       ++ +
Sbjct: 172 RALDAFEWLARSS--APASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAM 227

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  + + G FD A   L  M  DR                                  GI
Sbjct: 228 MGVYARSGRFDDARQLLDTM-HDR----------------------------------GI 252

Query: 121 VPDLVAYNTMINVFGKAKLFKE--ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            PDLV++NT+IN   K+       A  L+ E+R+ G++PD ++Y+TL++   ++    +A
Sbjct: 253 DPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDA 312

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           ++VF +M    C  DL T N M+ V+G+   A++A+RLF  + + G  P  ++YN+LL  
Sbjct: 313 VTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYA 372

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           + +     +  H    + +   ++N +TYNTMI +YGK    + A  L  EM+  G  P+
Sbjct: 373 FAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPD 432

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR--- 355
           A+TY+ +I   GK  ++  A  + + +  +G++   + +  +I AY + G  A A+    
Sbjct: 433 AVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFD 492

Query: 356 -LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            ++    +P+ +     + + AR+G  E+   ++R+  +     D  ++  ++   ++  
Sbjct: 493 CMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552

Query: 415 KYANVIEVFEKM 426
           K   + EV + M
Sbjct: 553 KCEEIEEVIQDM 564



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 6/367 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            +N ++     +  +E A  +FD M + G  P   + + ++     +G  D     ++++ 
Sbjct: 783  WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEEL- 841

Query: 82   QD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            QD   ++S   VL   L++   K  D  + + I++ +K++G +P++  Y +MI++     
Sbjct: 842  QDMNFKISKSTVLL--LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899

Query: 139  LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             F++  L+I EM   G KPD    + LLN+Y     F     V+  + E     D  T N
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959

Query: 199  IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +I +Y +    ++   L   M K G+ P + SY +LL    +AEL  +A  +F  M+ K
Sbjct: 960  TLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSK 1019

Query: 259  EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
              + N   Y+ M+KIY  +  H KA NL+  M+  GIEP   T   ++  +G AG+   A
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREA 1079

Query: 319  AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
              +   L+SS +E+  + Y T+  AY + G   H    L E+++    P     T   RA
Sbjct: 1080 ENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139

Query: 379  GRIEEAT 385
              + E T
Sbjct: 1140 ASLCEQT 1146



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 155/340 (45%), Gaps = 6/340 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF--GEAIHLFRLM 255
           N M+ VY +     DA +L  +M   GIDP +VS+NTL+    ++     G A+ L   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  +  +V+TYNT+I    +S   E A  + ++M      P+  TY+ ++++ G+ GK 
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
           + A  LF++L   G   D + Y +++ A+ + G V   +    +L +     N I   T 
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + GR++ A  ++ +    G   D   +  MI+   +  + A   +V E M  AG 
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGL 464

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P     + ++ +Y K      A++ +  M   G       +  ML ++    D   +  
Sbjct: 465 KPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLC 524

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L+ ++ +D+     +++ V+     + ++  +   ++  M
Sbjct: 525 LYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM 564



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 144/608 (23%), Positives = 250/608 (41%), Gaps = 101/608 (16%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +A   P++ A++ ++    +  +   A   FD M   G+ PDR  Y  ++  F + G  +
Sbjct: 461  DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520

Query: 72   SAISWLQQMEQDRVSGDLVLYSNL-IELARK-----LSDYSKAISIFSRLKSSGIVPDLV 125
              +   ++M  D    D  +Y  L + LA++     + +  + + +  R+ + GI+  ++
Sbjct: 521  KMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRM-NLGIISTML 579

Query: 126  AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                 ++    AKL K+A L       QG KPD  S  +++N YV   K  E LS+   +
Sbjct: 580  IKARCVS--QGAKLLKKACL-------QGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630

Query: 186  NE-VNCPLDLTT-CNIMIDVYGQLDMAKDADRLFWSMRKMGIDP--SVVSYNTLLRVYGE 241
             E V+   DL + C+IM+    Q  ++       +S R M   P  +   Y  L+    E
Sbjct: 631  CEHVSFSQDLISECSIMLLCRKQTSISAYEQ---YSQRLMLKYPGQNCNLYEYLITCLIE 687

Query: 242  AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
            AE F EA  +F  MQ   IE +   Y ++I  Y K    E A  LM +    GI  N ++
Sbjct: 688  AEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILS 747

Query: 302  YSTII-AIWGKAGKLDRAAMLFQKLR-SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
               II   +GK     +A +L + LR +SG  ID  ++  +I AY   GL   A+ +   
Sbjct: 748  CRVIIIEAYGKIKLWQQAEILVKGLRQASG--IDRRIWNALIHAYAESGLYEKARAVFDN 805

Query: 360  LRQPNTIPRETAITILARA----GRIEEATWV----------------------FRQAFD 393
            + +   +P   ++  + RA    GR++E   V                      F +A D
Sbjct: 806  MIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGD 865

Query: 394  -------------AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
                         AG + ++ ++  MI L   + ++ +V  +  +M  AG+ PD  I+  
Sbjct: 866  VFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNA 925

Query: 441  VLNSYGKLREFETADDLYSEMQEEG---------------C-VFSDQVHFQMLSLYGARK 484
            +LN Y     F+    +Y  + E G               C  F  +  F +L+  G R 
Sbjct: 926  LLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRG 985

Query: 485  DFNMLES-------------------LFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
                L+S                   +FE + S S    + ++H++  IY  A   + A 
Sbjct: 986  LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045

Query: 526  RIMNRMNK 533
             ++  M +
Sbjct: 1046 NLLAVMKE 1053



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 187/436 (42%), Gaps = 8/436 (1%)

Query: 36   ELAHGLFDEMRQRGIAPDRYTYSTLIT-CFGKEGMFDSAISWLQQMEQDRVSG-DLVLYS 93
            E AH L D+  Q GI  +  +   +I   +GK  ++  A   ++ + Q   SG D  +++
Sbjct: 727  ETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQ--ASGIDRRIWN 784

Query: 94   NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
             LI    +   Y KA ++F  +  +G +P + + N M+          E  +++EE+++ 
Sbjct: 785  ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844

Query: 154  GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
              K    +   LL+ + +     E + ++  M       ++     MI +    +  +D 
Sbjct: 845  NFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDV 904

Query: 214  DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
            + +   M   G  P +   N LL +Y  A  F     ++R +    +E +  TYNT+I +
Sbjct: 905  ELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVM 964

Query: 274  YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
            Y +S   E+   L+ EM  RG+ P   +Y +++A   KA   ++A  +F+++RS   +++
Sbjct: 965  YCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLN 1024

Query: 334  PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFR 389
              +Y  M+  Y   G  + A+ LL  +++    P    + IL      AG+  EA  V  
Sbjct: 1025 RSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN 1084

Query: 390  QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                +        +  + + + +N  Y +      +M+  G  PD  +    + +     
Sbjct: 1085 NLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCE 1144

Query: 450  EFETADDLYSEMQEEG 465
            +   A  L   +Q+ G
Sbjct: 1145 QTADAILLLKSLQDCG 1160



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 223/523 (42%), Gaps = 25/523 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++    ++   E A  +F++M      PD +TY+ +++  G+ G  + A   
Sbjct: 291 PDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERL 350

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++ +     D + Y++L+    K  +  K      +L  +G   + + YNTMI+++GK
Sbjct: 351 FRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGK 410

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L +EMR  G  PD V+Y+ +++   + ++  EA  V  +M +      L  
Sbjct: 411 MGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIA 470

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I  Y +     DA+  F  M   G+ P  ++Y  +L V+  +    + + L+R M 
Sbjct: 471 FSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMM 530

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-----NRGIEPNAITYSTIIAIWGK 311
                 +   Y  ++    K  + E+   ++Q+M+     N GI       ST++    K
Sbjct: 531 NDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGI------ISTMLI---K 581

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--- 368
           A  + + A L +K    G + D    ++++ AY           LL  + +  +  +   
Sbjct: 582 ARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLI 641

Query: 369 -ETAITILARAGRIEEATWVFRQAFDAG-EVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
            E +I +L R      A   + Q        ++ +++  +I      + ++   +VF  M
Sbjct: 642 SECSIMLLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFFSEACQVFCDM 701

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD-QVHFQMLSLYGARKD 485
           +  G      I   ++++Y KL   ETA  L  +  + G   +       ++  YG  K 
Sbjct: 702 QFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKL 761

Query: 486 FNMLESLFERLDSDSNINKK---ELHHVVA--GIYERANRLND 523
           +   E L + L   S I+++    L H  A  G+YE+A  + D
Sbjct: 762 WQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFD 804



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 140/292 (47%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P+ + Y ++I+       F      + +ME      DL + + L+ +  
Sbjct: 872  IYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYT 931

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               ++ +   ++  +  +G+ PD   YNT+I ++ ++   +E   L+ EM ++G+ P   
Sbjct: 932  AAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQ 991

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            SY +LL    +     +A  +F EM   +  L+ +  ++M+ +Y        A+ L   M
Sbjct: 992  SYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG A    EA ++   ++   +E + + Y+T+   Y K+ ++
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDY 1111

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
               T  + EM+  G+EP+   ++  I       +   A +L + L+  G ++
Sbjct: 1112 NHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDL 1163



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/498 (19%), Positives = 214/498 (42%), Gaps = 21/498 (4%)

Query: 48   RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYS 106
            +G  PD  +  +++  +      +  +S L+ + E    S DL+   +++ L RK +  S
Sbjct: 598  QGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSIS 657

Query: 107  KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
                   RL       +   Y  +I    +A+ F EA  +  +M+  G++     Y +++
Sbjct: 658  AYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESII 717

Query: 167  NLYVENHKFVEALSVFAEMNEVNCPLDLTTCN-IMIDVYGQLDMAKDADRLFWSMRKM-G 224
            + Y +      A  +  +  +   PL++ +C  I+I+ YG++ + + A+ L   +R+  G
Sbjct: 718  STYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASG 777

Query: 225  IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
            ID  +  +N L+  Y E+ L+ +A  +F  M +      V + N M++        ++  
Sbjct: 778  IDRRI--WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835

Query: 285  NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
             +++E+Q+   + +  T   ++  + KAG +     ++  ++++G   +  LY++MI   
Sbjct: 836  VVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI--- 892

Query: 345  ERVGLVAHAKR------LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDA 394
                L+ H  R      ++ E+     +P+       + +   AG  +  T V+R   +A
Sbjct: 893  ---SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEA 949

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            G   D   +  +I ++ R+ +      +  +M   G  P       +L +  K    E A
Sbjct: 950  GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQA 1009

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
            D ++ EM+ +    +  ++  M+ +Y    + +  E+L   +  D         H++   
Sbjct: 1010 DQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069

Query: 515  YERANRLNDASRIMNRMN 532
            Y  A +  +A  ++N + 
Sbjct: 1070 YGTAGQPREAENVLNNLK 1087



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 95/215 (44%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            EA   P    YN ++    R+ + E    L +EM +RG+ P   +Y +L+    K  + +
Sbjct: 948  EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    ++M       +  +Y  ++++ R   ++SKA ++ + +K  GI P +   + ++
Sbjct: 1008 QADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILM 1067

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              +G A   +EA  ++  ++   ++  T+ YST+ + Y++N  +    +   EM      
Sbjct: 1068 TSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVE 1127

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             D       I      +   DA  L  S++  G D
Sbjct: 1128 PDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/284 (18%), Positives = 122/284 (42%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y  ++  +    ++     +  EM   G  PD    + L+  +   G FD 
Sbjct: 879  AGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDR 938

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                 + + +  +  D   Y+ LI +  +     +  ++ + +   G+ P L +Y +++ 
Sbjct: 939  TTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLA 998

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
               KA+L ++A  + EEMR +  + +   Y  ++ +Y       +A ++ A M E     
Sbjct: 999  ASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP 1058

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + T +I++  YG     ++A+ +  +++   ++ S + Y+T+   Y +   +       
Sbjct: 1059 TIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKL 1118

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+R  +E +   +   I+      +   A  L++ +Q+ G +
Sbjct: 1119 LEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/246 (19%), Positives = 103/246 (41%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A + P +   N +L     A  ++    ++  + + G+ PD  TY+TLI  + +    
Sbjct: 912  EGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRP 971

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   + L +M +  ++  L  Y +L+  + K     +A  IF  ++S     +   Y+ M
Sbjct: 972  EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            + ++  A    +A  L+  M+E G++P   +   L+  Y    +  EA +V   +   + 
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +     + + D Y +             M++ G++P    +   +R     E   +AI 
Sbjct: 1092 EVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAIL 1151

Query: 251  LFRLMQ 256
            L + +Q
Sbjct: 1152 LLKSLQ 1157


>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 890

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 179/338 (52%), Gaps = 1/338 (0%)

Query: 31  RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
           R  +  LA GLF+  R  G     +++S +I+ FG+ G F  A+   + M    V  +++
Sbjct: 225 RLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVI 284

Query: 91  LYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
            Y+++I+   K    +   +  +  + ++G++PD + YN++++V     +++ A+ L+ E
Sbjct: 285 TYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSE 344

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M  + + PD  +Y+T L+   +  +   A  VF EM+      ++ T + M+D Y + ++
Sbjct: 345 MDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANL 404

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            +DA  L+  M+   +    VSYNTL+ +Y +     EAI   + M+R  I ++VVTYN 
Sbjct: 405 LEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNA 464

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  YGK   +++   L +EM+ R I PN +TYST+I ++ K      A  ++++ + + 
Sbjct: 465 LLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMAR 524

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
           +EID V Y  +I    + GL+  +  LL  + +    P
Sbjct: 525 LEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKP 562



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 159/291 (54%), Gaps = 1/291 (0%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P+V  YN ++    + +  +++    +DEM   G+ PDR TY++L++    +GM++ A  
Sbjct: 281 PNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQK 340

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M+   +  D+  Y+  ++   K      A  +F  + S  + P++V Y+ M++ + 
Sbjct: 341 LLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA L ++A  L EEM+ + V  D VSY+TL+ +Y +     EA+    EM       D+ 
Sbjct: 401 KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N ++  YG+  M  +  RLF  M+   I P+ ++Y+T++ +Y + E+F EA+ ++R  
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +   +E +VV Y+ +I    K+   E +  L+  M  +GI+PN +T+++II
Sbjct: 521 KMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSII 571



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 226/474 (47%), Gaps = 27/474 (5%)

Query: 11  EEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK- 66
           E AR   Y  +V +++ ++    R  ++  A  LF  M   G+ P+  TY+++I    K 
Sbjct: 237 ERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKG 296

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           E  FD  + +  +M  + +  D + Y++L+ +      +  A  + S +    IVPD+  
Sbjct: 297 EVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFT 356

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           YNT ++   KA     AR + EEM  + V P+ V+YS +++ Y + +   +AL+++ EM 
Sbjct: 357 YNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMK 416

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
             +  LD  + N ++ +Y +L    +A      M + GI+  VV+YN LL  YG+  ++ 
Sbjct: 417 LRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYD 476

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           E   LF  M+ + I  N +TY+TMI +Y K    ++A ++ +E +   +E + + YS II
Sbjct: 477 EVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAII 536

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER-----VGLVAHAKRLLHELR 361
               K G ++ + ML   +   G++ + V + ++I A ++      G+   +  + + + 
Sbjct: 537 DTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIE 596

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANV 419
           Q + I  + A        RI +   +F Q  A  AG +K             R  K+  +
Sbjct: 597 QSSPIVIDGAFQNKPGEDRILK---MFEQLAAEKAGHLKK--------NRSGRQDKHC-I 644

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           + +F+KM      P+    + +LN+      +E A  L   ++    +F +QV+
Sbjct: 645 LWLFQKMHELNIKPNVVTFSAILNACSLCNSYEDASLLLDTLR----LFDNQVY 694



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L S +I    +L + + A+ +F R +  G    + +++ MI+ FG+   F +A  L   M
Sbjct: 215 LVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSM 274

Query: 151 REQGVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
              GV P+ ++Y+++++   +    F   +  + EM       D  T N ++ V     M
Sbjct: 275 SSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGM 334

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A +L   M    I P V +YNT L    +A     A  +F  M  K +  NVVTY+ 
Sbjct: 335 WEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSA 394

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           M+  Y K+   E A NL +EM+ R +  + ++Y+T++ I+ K G LD A    +++  SG
Sbjct: 395 MMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSG 454

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEAT 385
           +  D V Y  ++  Y + G+    +RL  E++     PNT+   T I +  +    +EA 
Sbjct: 455 INRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAM 514

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            V+R+   A    D+  +  +I+   +N    + I +   M   G  P+
Sbjct: 515 DVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPN 563



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 9/270 (3%)

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TL R+ GE  L   A+ LF   + +     V +++ MI  +G++     A +L + M + 
Sbjct: 222 TLGRL-GEINL---ALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSW 277

Query: 294 GIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           G+ PN ITY++II    K     D     + ++ ++G+  D + Y +++      G+   
Sbjct: 278 GVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEM 337

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A++LL E+      P+     T +  L +AG+I+ A  VF +        ++  +  M++
Sbjct: 338 AQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMD 397

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            +++     + + ++E+M+      D      ++  Y KL   + A +   EM+  G   
Sbjct: 398 GYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINR 457

Query: 469 SDQVHFQMLSLYGARKDFNMLESLFERLDS 498
               +  +LS YG    ++ +  LFE + +
Sbjct: 458 DVVTYNALLSGYGKHGMYDEVRRLFEEMKA 487


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 256/556 (46%), Gaps = 44/556 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V     +L ++++A + E ++ +F+ MRQ G++PD Y +ST I  F K G  + AI  
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME+  VS ++V Y+NLI    K  +  +A     ++   G+   L+ Y+ +IN   K
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F EA  +++E  E+G  P+ V Y+TL++ Y +     +AL +  +M       +  T
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388

Query: 197 CNIMIDVYGQLDMAKDADRLFWSM--RKMGIDPSVVS-----------YNTLLRVYGE-- 241
            N +I  + ++   + A+ +   M  R   I+P   +           + + LR   E  
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448

Query: 242 -----------AELFG---------EAIHL-FRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
                        L G         +A+ L FRL++ K    N+VT N +I    K+   
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE-KGFGANLVTTNALIHGLCKTGNM 507

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A  L+++M  RG   + ITY+T+I+   K GK++    L  ++   G+E D   Y  +
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           I    R+G +  A  L +E +  + +P      ++     +A +IEE   +F +      
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +  V+  +I  + RN       ++ + MRS G  P +   + +++    +   E A  
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS-DSNINKKELHHVVAGIY 515
           L  EM++EG + +   +  ++  Y      + + ++ + + S D + NK     ++ G Y
Sbjct: 688 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG-Y 746

Query: 516 ERANRLNDASRIMNRM 531
            ++  +  A+++++ M
Sbjct: 747 SKSGDMKTAAKLLHEM 762



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 234/547 (42%), Gaps = 77/547 (14%)

Query: 8   WINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           W+ E  R   SP V+ ++  +    +  + E A  LF +M + G++P+  TY+ LI    
Sbjct: 233 WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G  D A  + ++M +D V+  L+ YS LI    KL  +++A S+       G  P+ V
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 126 AYNTMINV-----------------------------------FGKAKLFKEARLLIEEM 150
            YNT+I+                                    F K    ++A  ++EEM
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLD---------------- 193
             +G   +  +++T+++    N +F  AL    EM   N  P D                
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 194 ------------------LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
                             L T N +I    +    ++A RL   M + G     ++YNTL
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +     E   L   M ++ IE +  TYN +I    +  + ++A NL  E ++R +
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            PN  TY  +I  + KA K++    LF +L +  +E++ V+Y T+I AY R G    A +
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652

Query: 356 LLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           L  ++R     P T    + I  +   GR+E+A  +  +    G + ++  +  +I  + 
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +  +   V+ V ++M S    P+     ++++ Y K  + +TA  L  EM  +G +  D 
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG-IVPDT 771

Query: 472 VHFQMLS 478
           V + +L+
Sbjct: 772 VTYNVLT 778



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 164/335 (48%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  ++   N ++  + +    + A  L  +M +RG   D+ TY+TLI+   KEG  +
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                  +M +  +  D   Y+ LI    ++    +A+++++  KS  +VP++  Y  MI
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + KA   +E   L  E+  Q ++ ++V Y+TL+  Y  N   VEA  +  +M     P
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T + +I     +   +DA  L   MRK G+ P+VV Y  L+  Y +     + +++
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 723

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M   +I  N +TY  MI  Y KS + + A  L+ EM  +GI P+ +TY+ +   + K
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            GK++    +   +   G+ +D + Y T++  +++
Sbjct: 784 EGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 196/419 (46%), Gaps = 4/419 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+    N +++   +  Q E A  + +EM  RG + +   ++T+I        F+SA+ 
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    +  +  L + L+    K   +S A+ ++ RL   G   +LV  N +I+   
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA  L+++M E+G   D ++Y+TL++   +  K  E   +  EM +     D  
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++I    ++    +A  L+   +   + P+V +Y  ++  Y +A+   E   LF  +
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +E N V YNT+I+ Y ++    +A  L  +M+++GI P   TYS++I      G++
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           + A  L  ++R  G+  + V Y  +I  Y ++G +     +L E+      PN I     
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I   +++G ++ A  +  +    G V D   +  +   F +  K     ++ + M   G
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG 801



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 190/434 (43%), Gaps = 46/434 (10%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +  AI +F  L + G+ P +     +++   KA   +++  + E MR QGV PD   +ST
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFST 251

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMR 221
            +N + +  K  +A+ +F +M ++    ++ T N +I     +G LD   +A R    M 
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD---EAFRFKEKMV 308

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G++ ++++Y+ L+    + E F EA  + +    K    N V YNT+I  Y K     
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 368

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  +  +M ++GI PN++T ++II  + K G++++A  + +++ S G  I+P  + T+I
Sbjct: 369 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 428

Query: 342 ------VAYERV------------------------GLVAHAK---------RLLHELRQ 362
                   +E                          GL    K         RLL +   
Sbjct: 429 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 488

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N +     I  L + G ++EA  + ++  + G V D   +  +I    +  K     ++
Sbjct: 489 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 548

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G  PD+    L+++   ++ + + A +L++E +    V +   +  M+  Y  
Sbjct: 549 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 608

Query: 483 RKDFNMLESLFERL 496
                  E LF  L
Sbjct: 609 ADKIEEGEKLFTEL 622



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 9/245 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +D  +  Y T  R  G    F  AI +FR +  K +   V T   ++    K+ E EK+ 
Sbjct: 177 VDLLIHVYCTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY 232

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            + + M+ +G+ P+   +ST I  + K GK++ A  LF  +   GV  + V Y  +I   
Sbjct: 233 WVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGL 291

Query: 345 ERVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G +  A R   ++ +       I     I  L +  +  EA  V ++  + G   + 
Sbjct: 292 CKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE 351

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            V+  +I+ + +     + + +   M S G  P+S  +  ++  + K+ + E A+ +  E
Sbjct: 352 VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEE 411

Query: 461 MQEEG 465
           M   G
Sbjct: 412 MLSRG 416


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VFAYN ++    +  + + A  + D MR +  +PD  TY+ +I      G  D A+  
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L Q+  D     ++ Y+ LIE         +A+ +   + S G+ PD+  YNT+I    K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +   A  ++  +  +G +PD +SY+ LL   +   K+ E   +  +M    C  ++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I    +    ++A  L   M++ G+ P   SY+ L+  +        AI     M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKL 315
                 ++V YNT++    K+ + ++A  +  ++   G  PN+ +Y+T+  A+W    K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            RA  +  ++ S+G++ D + Y +MI    R G+V  A  LL ++R     P+ +     
Sbjct: 456 -RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           +    +A RIE+A  V       G   + + +  +IE
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 209/485 (43%), Gaps = 43/485 (8%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G +  ++  L+ M +   + D++L + LI+    L +  KA+ +   L+  G  PD+ 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           AYN +IN F K     +A  +++ MR +   PDTV+Y+ ++       K   AL V  ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 186 NEVNCPLDLTTCNIMID---VYGQLD---------------------------MAKDA-- 213
              NC   + T  I+I+   + G +D                           M K+   
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 214 DRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           DR F  +R +   G +P V+SYN LLR       + E   L   M  ++ + NVVTY+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    +  + E+A NL++ M+ +G+ P+A +Y  +IA + + G+LD A    + + S G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             D V Y T++    + G    A  +  +L +    PN+    T  + L  +G    A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   D   +  MI    R        E+   MRS  + P      +VL  + 
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVH---FQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           K    E A ++   M   GC  ++  +    + +   G R +   L +   R+D+ S  +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYS 579

Query: 504 KKELH 508
            K LH
Sbjct: 580 FKRLH 584



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 164/350 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +     + A  L DEM  RG+ PD +TY+T+I    KEGM D A   
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ +E      D++ Y+ L+        + +   + +++ S    P++V Y+ +I    +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L++ M+E+G+ PD  SY  L+  +    +   A+     M    C  D+  
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  + ++G  P+  SYNT+      +     A+H+   M 
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+ + +TYN+MI    +    ++A  L+ +M++    P+ +TY+ ++  + KA +++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            A  + + +  +G   +   Y  +I      G  A A  L ++L + + I
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 35/227 (15%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+V  Y++++  + R  + E A  L   M+++G+ PD Y+Y  LI  F +EG  D A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK----------------- 116
           I +L+ M  D    D+V Y+ ++    K     +A+ IF +L                  
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 117 ------------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
                             S+GI PD + YN+MI+   +  +  EA  L+ +MR     P 
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            V+Y+ +L  + + H+  +A++V   M    C  + TT  ++I+  G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 218/495 (44%), Gaps = 50/495 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +   N+VLR +    +W+    ++ EM Q GI P   TY+TL+  F +EG  D A  
Sbjct: 193 PPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAK 252

Query: 76  WLQQMEQDRVSGDL---VLYSNLIE-LARKLSDYSKAISIFSRLKSS------------- 118
            L++ME  R  G L   V Y+ +I  LARK  +  KA  +  R++ S             
Sbjct: 253 LLREMEA-RPGGCLPSDVTYNVVINGLARK-GELEKAAQLVDRMRMSKKASAFTFNPLIT 310

Query: 119 ---------------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                                GIVP +V YNT+I+   ++   + AR+   EMR  G+ P
Sbjct: 311 GYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLP 370

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D ++Y++L+N Y +     EAL +F ++        + T NI++D Y +L   ++A R  
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFK 430

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK---IY 274
             M + G  P V +Y  L+    +          F  M  K ++ +   YNT I    I 
Sbjct: 431 QEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           G + E   A  L + M +RGI  + +TY+  +    K+G L  A +L+ K+ S G++ D 
Sbjct: 491 GSTSE---AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDC 547

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQ 390
           + Y  +I A+   G +  A+ +   +      P     T+      R G +  A   F++
Sbjct: 548 ITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQK 607

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
             + G   +   +  +I    R  +     + F +M   G  P+ +   L+++   K   
Sbjct: 608 MLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN 667

Query: 451 FETADDLYSEMQEEG 465
           +E A  LYSEM + G
Sbjct: 668 WEEAIRLYSEMHQHG 682



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 153/351 (43%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++  + R+   E A   F EMR  G+ PD  TY++LI  + K G    A+  
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +++  ++  ++ Y+ L++   +L D  +A      +   G  PD+  Y  ++N   K
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +     R   +EM  +G++PD  +Y+T ++  +      EA  +   M       D  T
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI +D   +    KDA  L+  M   G+ P  ++Y  L+  + E     EA  +F  M 
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  + VTY   I  Y +      A    Q+M   G+ PN +TY+ +I    + G+ +
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            A   F ++   G+  +   Y  +I    + G    A RL  E+ Q    P
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHP 685



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 1/337 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  YN ++    +A   + A  LF ++++ G+AP   TY+ L+  + + G  + A  +
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M +     D+  Y+ L+  +RK+ + +     F  + S G+ PD  AYNT I+    
Sbjct: 430 KQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELI 489

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L E M  +G+  DTV+Y+  L+   ++    +A  ++ +M       D  T
Sbjct: 490 LGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCIT 549

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + +    ++A  +F  M   G+ PS V+Y   +  Y        A   F+ M 
Sbjct: 550 YTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKML 609

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  N VTYN +I    +      A     EM  RG+ PN  TY+ +I    K G  +
Sbjct: 610 EEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWE 669

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            A  L+ ++   G+  D   +  +   ++  G   HA
Sbjct: 670 EAIRLYSEMHQHGIHPDHCTHNALFKGFDE-GQSKHA 705



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 124/295 (42%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           + A  +PSV  YN++L    R    E A     EM ++G  PD  TY+ L+    K    
Sbjct: 399 KRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNL 458

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                +  +M    +  D   Y+  I     L   S+A  +   + S GI  D V YN  
Sbjct: 459 AMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIF 518

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   K+   K+A +L  +M   G++PD ++Y+ L++ + E  +  EA  +F  M     
Sbjct: 519 LDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGL 578

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P    T  + I  Y +      A   F  M + G+ P+ V+YN L+           A  
Sbjct: 579 PPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQ 638

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            F  M  + +  N  TY  +I    K    E+A  L  EM   GI P+  T++ +
Sbjct: 639 HFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNAL 693



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 40/298 (13%)

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
            L+ F EM     P  +  CN+++          D   ++  M ++GI+PS+V+YNTLL 
Sbjct: 180 CLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLD 239

Query: 238 VYGEAELFGEAIHLFRLMQRK-------EIEQNVV------------------------- 265
            +       +A  L R M+ +       ++  NVV                         
Sbjct: 240 SFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK 299

Query: 266 ----TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
               T+N +I  Y      EKA  L  EM+N GI P  +TY+TII    ++G ++ A M 
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----AR 377
           F ++R+ G+  D + Y ++I  Y + G +  A  L  +L++    P      IL     R
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            G +EEA    ++  + G   D+S +  ++    + +  A V E F++M S G  PD 
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDC 477



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/434 (21%), Positives = 186/434 (42%), Gaps = 13/434 (2%)

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLN 167
           S+++ +   GI P +V YNT+++ F +     +A  L+ EM  R  G  P  V+Y+ ++N
Sbjct: 217 SVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVIN 276

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
                 +  +A  +   M  ++      T N +I  Y      + A  L   M   GI P
Sbjct: 277 GLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVP 335

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+YNT++     +     A   F  M+   +  +++TYN++I  Y K+   ++A  L 
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            +++  G+ P+ +TY+ ++  + + G L+ A    Q++   G + D   Y  ++    +V
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
             +A  +    E+     QP+     T I+     G   EA  +       G   D   +
Sbjct: 456 RNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTY 515

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY---GKLREFETADDLYSE 460
              ++   ++    +   ++ KM S G  PD      +++++   G+LRE   A D++  
Sbjct: 516 NIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLRE---ARDIFDG 572

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           M   G   S   +   +  Y  R +       F+++  +     +  ++V+     R  R
Sbjct: 573 MLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGR 632

Query: 521 LNDASRIMNRMNKR 534
            N A +  + M +R
Sbjct: 633 TNLAYQHFHEMLER 646



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ + Y +++    +   WE A  L+ EM Q GI PD  T++ L   F  EG    AI 
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQ 707

Query: 76  WLQQM 80
           +++ +
Sbjct: 708 YMENV 712


>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 206/429 (48%), Gaps = 9/429 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           + + Y  +L+  LR+     A  ++ E+R+RG   D + Y+ L+    K+   D      
Sbjct: 41  NCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVF 100

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M++     D   Y+ +I +  K+    +++++F  +   G  P+L+AYNTMI      
Sbjct: 101 KDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANN 160

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTT 196
           ++  +   L  +M E   +P+  ++S +LN+ V   +    L    E+ EV N  ++ + 
Sbjct: 161 RMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQ----LGRLDEVVEVSNKFMNKSI 216

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++    +L  A +A RLF +M     +    +Y ++L    +A    EA+ L   + 
Sbjct: 217 YAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIH 276

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I  + V YNT++   GK  +     +L ++M+  G  P+  +Y+ +I+ +G+AG+++
Sbjct: 277 EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVE 336

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A  +F++L +S  + D + + ++I    + G +  A     E+R+    P+ +   T I
Sbjct: 337 EAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLI 396

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  ++E A  +F +    G   +I  +  +++   R+ + A  ++++ K++  G  
Sbjct: 397 ECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 456

Query: 433 PDSHIIALV 441
           PDS   A++
Sbjct: 457 PDSITYAVL 465



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 183/395 (46%), Gaps = 32/395 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y   +FAYN++L  + +  + +  + +F +M+++   PD YTY+ +I   GK G  D ++
Sbjct: 73  YKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESL 132

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +  Q+M +   + +L+ Y+ +I+         K I +FS++  +   P+   ++ ++NV 
Sbjct: 133 TLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVL 192

Query: 135 --------------------------------GKAKLFKEARLLIEEMREQGVKPDTVSY 162
                                            K     EA  L   M     + D  +Y
Sbjct: 193 VAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAY 252

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            ++L    +  K  EAL + ++++E     D    N ++   G+L    D   L+  M++
Sbjct: 253 MSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQ 312

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P + SYN L+  +G A    EA+ +F  ++    + +++++N++I   GK+ + ++
Sbjct: 313 DGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDE 372

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A    +EM+  G+ P+ +TYST+I  +GK  K++ A  LF ++ + G   + V Y  ++ 
Sbjct: 373 AHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLD 432

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
             ER G  A A  L  +L+Q    P      +L R
Sbjct: 433 CLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLER 467



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 13/346 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF---GKEG 68
           E  Y+P++ AYN +++ +   +  +    LF +M +    P+ +T+S ++      G+ G
Sbjct: 140 EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLG 199

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D  +    +     +      Y+ L+    KL   S+A  +F  + S     D  AY 
Sbjct: 200 RLDEVVEVSNKFMNKSI------YAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYM 253

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           +M+     A    EA  L+ ++ E+ +  DTV Y+T+L+   +  K  +   ++ +M + 
Sbjct: 254 SMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQD 313

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D+ + NI+I  +G+    ++A ++F  +      P ++S+N+L+   G+     EA
Sbjct: 314 GPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 373

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
              F+ M+ + +  +VVTY+T+I+ +GK+ + E A  L  EM   G  PN +TY+ ++  
Sbjct: 374 HMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDC 433

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
             ++G+   A  L+ KL+  G+  D + Y  +    ER+   +H K
Sbjct: 434 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVL----ERLQSGSHQK 475



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 36/354 (10%)

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           E+R +G K D  +Y+ LL+   +++K  +   VF +M   +C  D  T  IMI + G++ 
Sbjct: 67  ELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIG 126

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
            A ++  LF  M + G  P++++YNT+++      +  + I LF  M       N  T++
Sbjct: 127 KADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFS 186

Query: 269 TMIKIY---GKSLEHEKATNLMQEMQNRGI-----------------------------E 296
            ++ +    G+    ++   +  +  N+ I                             E
Sbjct: 187 VILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDE 246

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
            +   Y +++     AGK   A  L  K+    +  D V+Y T++ A  ++   +    L
Sbjct: 247 GDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDL 306

Query: 357 LHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
             +++Q    P+       I+   RAGR+EEA  +F +  ++    DI  F  +I    +
Sbjct: 307 YEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGK 366

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           N         F++MR  G  PD    + ++  +GK  + E A  L+ EM  EGC
Sbjct: 367 NGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGC 420



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 91/161 (56%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +F+YN+++ +  RA + E A  +F+E+      PD  ++++LI C GK G  D A  
Sbjct: 316 SPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHM 375

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M ++ +S D+V YS LIE   K      A  +F  + + G  P++V YN +++   
Sbjct: 376 RFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLE 435

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           ++    EA  L  ++++QG+ PD+++Y+ L  L   +H+ V
Sbjct: 436 RSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKV 476



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 66/120 (55%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P + ++N ++  + +    + AH  F EMR+ G++PD  TYSTLI CFGK    
Sbjct: 346 ENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKV 405

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A     +M  +  S ++V Y+ L++   +    ++A+ ++++LK  G+ PD + Y  +
Sbjct: 406 EMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 465



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP V  Y+ ++    +  + E+A  LFDEM   G +P+  TY+ L+ C  + G   
Sbjct: 382 EEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTA 441

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +++Q  ++ D + Y+    L R  S   + + +  +   +G V   V+   + 
Sbjct: 442 EAVDLYAKLKQQGLTPDSITYA---VLERLQSGSHQKVRVRRKNPITGWV---VSPLRLQ 495

Query: 132 NVFGKAKL 139
           N FGK++L
Sbjct: 496 NQFGKSQL 503


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 255/556 (45%), Gaps = 44/556 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V     +L ++++A + E ++ +F+ MRQ G++PD Y +ST I  F K G  + AI  
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              ME+  VS ++V Y+NLI    K  +  +A     ++   G+   L+ Y+ +IN   K
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F EA  +++E  E+G  P+ V Y+TL++ Y +     +AL +  +M       +  T
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455

Query: 197 CNIMIDVYGQLDMAKDADRLFWSM--RKMGIDPSVVS-----------YNTLLRVYGEAE 243
            N +I  + ++   + A+ +   M  R   I+P   +           + + LR   E  
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515

Query: 244 L----------------------FGEAIHL-FRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           L                        +A+ L FRL++ K    N+VT N +I    K+   
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE-KGFGANLVTTNALIHGLCKTGNM 574

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A  L+++M  RG   + ITY+T+I+   K GK++    L  ++   G+E D   Y  +
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
           I    R+G +  A  L +E +  + +P      ++     +A +IEE   +F +      
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             +  V+  +I  + RN       ++ + MRS G  P +   + +++    +   E A  
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS-DSNINKKELHHVVAGIY 515
           L  EM++EG + +   +  ++  Y      + + ++ + + S D + NK     ++ G Y
Sbjct: 755 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG-Y 813

Query: 516 ERANRLNDASRIMNRM 531
            ++  +  A+++++ M
Sbjct: 814 SKSGDMKTAAKLLHEM 829



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 234/547 (42%), Gaps = 77/547 (14%)

Query: 8   WINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           W+ E  R   SP V+ ++  +    +  + E A  LF +M + G++P+  TY+ LI    
Sbjct: 300 WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G  D A  + ++M +D V+  L+ YS LI    KL  +++A S+       G  P+ V
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419

Query: 126 AYNTMINV-----------------------------------FGKAKLFKEARLLIEEM 150
            YNT+I+                                    F K    ++A  ++EEM
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC-PLD---------------- 193
             +G   +  +++T+++    N +F  AL    EM   N  P D                
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539

Query: 194 ------------------LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
                             L T N +I    +    ++A RL   M + G     ++YNTL
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +     E   L   M ++ IE +  TYN +I    +  + ++A NL  E ++R +
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            PN  TY  +I  + KA K++    LF +L +  +E++ V+Y T+I AY R G    A +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719

Query: 356 LLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           L  ++R     P T    + I  +   GR+E+A  +  +    G + ++  +  +I  + 
Sbjct: 720 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 779

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +  +   V+ V ++M S    P+     ++++ Y K  + +TA  L  EM  +G V  D 
Sbjct: 780 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV-PDT 838

Query: 472 VHFQMLS 478
           V + +L+
Sbjct: 839 VTYNVLT 845



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 191/404 (47%), Gaps = 4/404 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+    N +++   +  Q E A  + +EM  RG + +   ++T+I        F+SA+ 
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L++M    +  +  L + L+    K   +S A+ ++ RL   G   +LV  N +I+   
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    +EA  L+++M E+G   D ++Y+TL++   +  K  E   +  EM +     D  
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N++I    ++    +A  L+   +   + P+V +Y  ++  Y +A+   E   LF  +
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +E N V YNT+I+ Y ++    +A  L  +M+++GI P   TYS++I      G++
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           + A  L  ++R  G+  + V Y  +I  Y ++G +     +L E+      PN I     
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           I   +++G ++ A  +  +    G V D   +  +   F +  K
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 853



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 152/310 (49%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  ++   N ++  + +    + A  L  +M +RG   D+ TY+TLI+   KEG  +
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                  +M +  +  D   Y+ LI    ++    +A+++++  KS  +VP++  Y  MI
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + KA   +E   L  E+  Q ++ ++V Y+TL+  Y  N   VEA  +  +M     P
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T + +I     +   +DA  L   MRK G+ P+VV Y  L+  Y +     + +++
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M   +I  N +TY  MI  Y KS + + A  L+ EM  +GI P+ +TY+ +   + K
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850

Query: 312 AGKLDRAAML 321
            GK++   +L
Sbjct: 851 EGKIEEGKLL 860



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 190/434 (43%), Gaps = 46/434 (10%)

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           +  AI +F  L + G+ P +     +++   KA   +++  + E MR QGV PD   +ST
Sbjct: 260 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFST 318

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMR 221
            +N + +  K  +A+ +F +M ++    ++ T N +I     +G LD   +A R    M 
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD---EAFRFKEKMV 375

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G++ ++++Y+ L+    + E F EA  + +    K    N V YNT+I  Y K     
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 435

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  +  +M ++GI PN++T ++II  + K G++++A  + +++ S G  I+P  + T+I
Sbjct: 436 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 495

Query: 342 ------VAYERV------------------------GLVAHAK---------RLLHELRQ 362
                   +E                          GL    K         RLL +   
Sbjct: 496 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 555

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            N +     I  L + G ++EA  + ++  + G V D   +  +I    +  K     ++
Sbjct: 556 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 615

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
             +M   G  PD+    L+++   ++ + + A +L++E +    V +   +  M+  Y  
Sbjct: 616 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 675

Query: 483 RKDFNMLESLFERL 496
                  E LF  L
Sbjct: 676 ADKIEEGEKLFTEL 689



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 5/190 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++R   R      A  L D+MR +GI P   TYS+LI      G  + A   + +M 
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           ++ +  ++V Y+ LI    KL    K +++   + S  I P+ + Y  MI+ + K+   K
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT-----T 196
            A  L+ EM  +G+ PDTV+Y+ L N + +  K  E   +  +    N PL L       
Sbjct: 821 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNSPLFLIHEAFRA 880

Query: 197 CNIMIDVYGQ 206
           C   +D++ +
Sbjct: 881 CTRRVDLWAK 890



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 66/134 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P+   Y+ ++  +    + E A  L DEMR+ G+ P+   Y+ LI  + K G  D  ++
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 789

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            LQ+M    +  + + Y+ +I+   K  D   A  +   +   GIVPD V YN + N F 
Sbjct: 790 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849

Query: 136 KAKLFKEARLLIEE 149
           K    +E +LL E+
Sbjct: 850 KEGKIEEGKLLAED 863



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 9/245 (3%)

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +D  +  Y T  R  G    F  AI +FR +  K +   V T   ++    K+ E EK+ 
Sbjct: 244 VDLLIHVYCTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY 299

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            + + M+ +G+ P+   +ST I  + K GK++ A  LF  +   GV  + V Y  +I   
Sbjct: 300 WVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGL 358

Query: 345 ERVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G +  A R   ++ +       I     I  L +  +  EA  V ++  + G   + 
Sbjct: 359 CKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNE 418

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            V+  +I+ + +     + + +   M S G  P+S  +  ++  + K+ + E A+ +  E
Sbjct: 419 VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEE 478

Query: 461 MQEEG 465
           M   G
Sbjct: 479 MLSRG 483


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 192/424 (45%), Gaps = 17/424 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P +  YN ++    R  +   A  L ++   +G+ P++++Y+ LI  + K+G +D
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +WL +M +     DLV Y  L+       +   A++I  ++   G+ PD   YN ++
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A+LL+ EM +Q V PD   Y+TL++ ++ N    EA  +F    E    
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             +   N MI  Y +  M KDA      M+K  + P   +Y+T++  Y +      A  +
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M + + + NVVTY ++I  + +  +  ++  + +EMQ  G+ PN +TYS +I  + K
Sbjct: 577 FREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCK 636

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
             KL  AA  F+++  +    + V +  ++  + + G  A +++        N       
Sbjct: 637 EAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK-------GNEFQENKQ 689

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
              L   GR+    W  R A        I +  C   +F    + +N      KM S G 
Sbjct: 690 SMFLNFFGRMISDGWAPRSA----AYNSILICLCQYGMFRTALQLSN------KMTSKGC 739

Query: 432 FPDS 435
            PDS
Sbjct: 740 IPDS 743



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/576 (20%), Positives = 242/576 (42%), Gaps = 47/576 (8%)

Query: 2   SVAILDWINEEARYSPSV--FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
            +   DW++   +YS  +  FAY+ +L+ + R++ +     + + MR   ++P R   S 
Sbjct: 76  GLKFFDWVSR-GQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI 134

Query: 60  LITCFGKEGMFDSAIS-WLQQMEQDRVSGDLVLYSNL---------IELARKLSD----- 104
           +I  +   G+ + A+  +   ++      D++  ++L         IE+ARKL D     
Sbjct: 135 VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEI 194

Query: 105 ----------YSKAISIFSRLK---------------SSGIVPDLVAYNTMINVFGKAKL 139
                     YS  I +    K                 G +P+++ YNT+I+ + K   
Sbjct: 195 DGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGD 254

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            + A  L  E++ +G  P   +Y  ++N + +   F     +  EMN     +++   N 
Sbjct: 255 MEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNT 314

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID   +      A      M + G  P +V+YNTL+          EA  L      K 
Sbjct: 315 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 374

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  N  +Y  +I  Y K   +++A+N + EM  RG +P+ +TY  ++     AG++D A 
Sbjct: 375 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITIL 375
            + +K+   GV  D  +Y  ++    +   +  AK LL E+   + +P      T +   
Sbjct: 435 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGF 494

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            R G ++EA  +F    + G    I  +  MI+ + +     + +    +M+     PD 
Sbjct: 495 IRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDE 554

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
              + V++ Y K  + + A  ++ EM +  C  +   +  +++ +  + D +    +F  
Sbjct: 555 FTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +   +     + ++ G + +  +L DA+     M
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 114/505 (22%), Positives = 215/505 (42%), Gaps = 55/505 (10%)

Query: 82  QDRVSGDLVLYSNLIELA-RKLSDYSKAISIF---SRLKSSGIVPDLVAYNTMINVFGKA 137
           Q R S   VL S++  L   ++ D    +  F   SR + SG +    AY++++ +  ++
Sbjct: 49  QTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGF-AYSSLLKLLARS 107

Query: 138 KLFKEARLLIEEMR------------------------EQGVK------------PDTVS 161
           ++F E  +++E MR                        E+ ++            PD ++
Sbjct: 108 RVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIA 167

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVN-----CPLDLTTCNIMIDVYGQLDMAKDADRL 216
            ++LLN+ V+  +   A  ++ EM E++     C  + +TC IM+    +    ++  +L
Sbjct: 168 CNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC-IMVKGLCKEGKLEEGRKL 226

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
                  G  P+++ YNTL+  Y +      A  LF  ++ K     V TY  +I  + K
Sbjct: 227 IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 286

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
             + +    L+ EM +RG+  N   Y+TII    K G + +A    + +   G + D V 
Sbjct: 287 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 346

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-----GRIEEATWVFRQA 391
           Y T+I    R G V+ A +LL +      +P + + T L  A     G    + W+    
Sbjct: 347 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            + G   D+  +G ++       +    + + EKM   G FPD+ I  ++++   K  + 
Sbjct: 407 -ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 465

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE-RLDSDSNINKKELHHV 510
             A  L +EM ++  +    V+  ++  +    + +    LFE  ++   N      + +
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAM 525

Query: 511 VAGIYERANRLNDASRIMNRMNKRR 535
           + G Y +   + DA   +NRM KR 
Sbjct: 526 IKG-YCKFGMMKDAMACINRMKKRH 549


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 224/494 (45%), Gaps = 38/494 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           ++Y ++++ +  AK    A  LF  M++ G +P+   ++ LI+   K G    A      
Sbjct: 254 YSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q+ V   ++ Y+ +I    KL   + A+ I   ++ +G  PD   YNT+I      K 
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT 373

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            +EA  L+    ++G  P  V+++ L+N Y    KF +AL +  +M    C LDL     
Sbjct: 374 -EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I+   + D  K+A  L   +   G+ P+V++Y +++  Y ++     A+ + ++M+R  
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            + N  TYN+++    K  +  KA  L+ +MQ  GI PN ITY+T++         D A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 320 MLFQKLRSSGVEID--------------------------------PVLYQTMIVAYERV 347
            LF+ +  +G++ D                                 V Y T+I  + + 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 348 GLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A    +R++ E   P++      +  L +  R+ EA  +  Q    G    I  +
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   R  K+ +   ++ +M S+G+ P +    + +NSY K    E A+DL  +M+ 
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 464 EGCVFSDQVHFQML 477
           EG V  D V + +L
Sbjct: 733 EG-VAPDVVTYNIL 745



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 243/558 (43%), Gaps = 72/558 (12%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           AR + S   YN  LR++ R    E    ++ ++ Q G+ PD  TY+T+I  + KEG   +
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTT 201

Query: 73  AISWLQQMEQDRVSGD------LVL-YSNLIELARKL-------------SDYS------ 106
           A  + + + +  +  +      LVL Y    EL +               ++YS      
Sbjct: 202 AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ 261

Query: 107 ---------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                    KA+ +F  +K  G  P++ A+  +I+   K+    +ARLL + M + GV P
Sbjct: 262 GLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVP 321

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM-AKDADRL 216
             ++Y+ ++  Y +  +  +AL +   M +  C  D  T N +I  YG  D   ++A+ L
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGLCDQKTEEAEEL 379

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
             +  K G  P+VV++  L+  Y  AE F +A+ +   M   + + ++  +  +I    K
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
               ++A  L+ E+   G+ PN ITY++II  + K+GK+D A  + + +   G + +   
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           Y +++    +   +  A  LL ++++   IP     T L + G+ +E        FD   
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ-GQCDE------HDFD--- 549

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                                N   +FE M   G  PD H  A++ ++  K    E A  
Sbjct: 550 ---------------------NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA-- 586

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
            YS +  +G   +   +  ++  +    + +   +L ER+  +        + V+     
Sbjct: 587 -YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645

Query: 517 RANRLNDASRIMNRMNKR 534
           +  RLN+A  I+++M+ R
Sbjct: 646 KQKRLNEALPILDQMSLR 663



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 205/469 (43%), Gaps = 33/469 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YN ++  +++ K+   A  L  +M++ GI P+  TY+TL+     E  FD+A   
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + MEQ+ +  D   Y+ L +   K     +A S   R    G+    V Y T+I+ F K
Sbjct: 555 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSK 611

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A  LIE M ++G  PD+ +YS LL+   +  +  EAL +  +M+       +  
Sbjct: 612 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 671

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             I+ID     G+ D AK   R++  M   G  PS  +Y   +  Y +     +A  L  
Sbjct: 672 YTILIDEMLREGKHDHAK---RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+R+ +  +VVTYN +I   G     ++A + ++ M     EPN  TY  ++    K G
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-G 787

Query: 314 KLDRAAMLFQKLRSSG----VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            L       + + +SG    +E+D + +Q +             +R++     P      
Sbjct: 788 NL----AYVRSVDTSGMWNLIELD-ITWQLL-------------ERMVKHGLNPTVTTYS 829

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I    +AGR+EEA  +       G   +  ++  +I+     K +   +     M   
Sbjct: 830 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 889

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           G+ P      L++       +FE    L+ ++ E G    D+V +++L+
Sbjct: 890 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILN 937



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 15/400 (3%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
           N  + A  +   + AI    R  S+ +      YN  +    +  + +    +  ++ + 
Sbjct: 118 NCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQD 177

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+ PDTV+Y+T++  Y +      A   F  + E     +  TCN ++  Y +    + A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M  MG   +  SY  L++   +A+   +A+ LF +M+R     NV  +  +I  
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             KS     A  L   M   G+ P+ +TY+ +I  + K G+++ A  + + +  +G   D
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 334 PVLYQTMIVAYERVGLVAH----AKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT 385
              Y T+I      GL       A+ LL+   +    P     T L      A + ++A 
Sbjct: 358 DWTYNTLI-----YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +  +   +    D+ VFG +I    +  +     E+  ++ + G  P+      +++ Y
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
            K  + + A ++   M+ +GC  +   +  +  +YG  KD
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSL--MYGLVKD 510



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 21/336 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + Y+V+L  + + K+   A  + D+M  RGI    + Y+ LI    +EG  D A  
Sbjct: 631 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 690

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M           Y+  I    K      A  +  +++  G+ PD+V YN +I+  G
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  A   ++ M     +P+  +Y  LL +L   N  +V ++      N +   LD+
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE--LDI 808

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T                   +L   M K G++P+V +Y++L+  + +A    EA  L   
Sbjct: 809 TW------------------QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 850

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  N   Y  +IK    +   EKA + +  M   G +P   +Y  ++      G 
Sbjct: 851 MCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            ++   LF  L   G   D V ++ +     + G V
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS   Y V + +  +  + E A  L  +M + G+APD  TY+ LI   G  G  D A 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAI---------------SIFSRLKSS 118
           S L++M       +   Y  L++ L +    Y +++                +  R+   
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P +  Y+++I  F KA   +EA LL++ M  +G+ P+   Y+ L+    +   F +A
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 179 LSVFAEMNEVN 189
           LS  + M+E  
Sbjct: 880 LSFVSIMSECG 890


>gi|414864941|tpg|DAA43498.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
          Length = 788

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 237/511 (46%), Gaps = 24/511 (4%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I DW   E  +  +V  YNVVL  V +A++W+L   L+ EM   G+APD  TY TL
Sbjct: 118 RAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNSTYGTL 177

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    + G   +A+ WL  M +  +  D V  S +++  +K  +Y  A   F R  S  I
Sbjct: 178 INVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSI 237

Query: 121 VP-------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
                    +L  YNT+I+ +GKA   ++      +M  +GV P  V+++++++ + ++H
Sbjct: 238 RRMEGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHH 297

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y + D    A+  +W M+   + P VVS  
Sbjct: 298 RMEKVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCR 357

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  +A  L + M  +    +  T + + ++Y      E+A        + 
Sbjct: 358 TLLYGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHH- 416

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLF-QKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
               N+  +S  I  +G+ G +  A   F   L+   + +       MI AY  VG++  
Sbjct: 417 --HMNSECFSANIDAFGEKGYIVLAEKAFVCCLKKKMISVSAC--NVMIKAYGLVGMLDE 472

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  + + + +    P+ +   + I +L+ A   ++A +   +      + D   +  +I 
Sbjct: 473 ACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVIS 532

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F++N        +F +M  +G  PD  + ++++++Y ++   + A   +  M+++G   
Sbjct: 533 SFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYE 592

Query: 469 SDQVHFQMLSLYG-------ARKDFNMLESL 492
           +  ++  ++ LY        AR  + +L+SL
Sbjct: 593 NVTIYNSLIKLYTKVGYVPEARGAYKLLKSL 623



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 216/486 (44%), Gaps = 65/486 (13%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E R   +++ YN ++    +A   E     F++M   G+AP   T++++I  +GK    +
Sbjct: 241 EGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRME 300

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              S ++ ME+ +   D   Y+ LI L R+  D   A   + ++K+  +VPD+V+  T++
Sbjct: 301 KVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLL 360

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV---------------ENHKFV 176
             +    +  +A  L++EM E+G   D  + S L  +YV                +H   
Sbjct: 361 YGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNS 420

Query: 177 EALS------------VFAEMNEVNC----PLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           E  S            V AE   V C     + ++ CN+MI  YG + M  +A  +   M
Sbjct: 421 ECFSANIDAFGEKGYIVLAEKAFVCCLKKKMISVSACNVMIKAYGLVGMLDEACEIANGM 480

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +  I P  V+Y +L+++   A+L  +AI+    M+  ++  + + Y+ +I  + K+ + 
Sbjct: 481 ERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDL 540

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             +  L +EM   G+ P+   YS +I  + + G + +A+  F  ++  G+  +  +Y ++
Sbjct: 541 RMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSL 600

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I  Y +VG V  A+     L+  +T     AI                           +
Sbjct: 601 IKLYTKVGYVPEARGAYKLLKSLDT----NAI---------------------------L 629

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD-SHIIALVLNSYGKLREFETADDLYS 459
               CMI+L+S +       EVF+ ++  G   + SH  A+++  Y K+  ++ A  +  
Sbjct: 630 YASNCMIDLYSDHCMVKEACEVFDSLKVRGIANEFSH--AMMVCMYKKVGRYDVAHRVCK 687

Query: 460 EMQEEG 465
           EMQ  G
Sbjct: 688 EMQALG 693



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 150/308 (48%), Gaps = 1/308 (0%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I  +G  GM D A      ME+  +  D V Y++LI+L        KAI    ++K 
Sbjct: 458 NVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKV 517

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
             ++ D + Y+ +I+ F K    + +  L  EM   GV+PD   YS L++ Y E     +
Sbjct: 518 VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQ 577

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A + F  M +     ++T  N +I +Y ++    +A   +  ++ +  +  + + N ++ 
Sbjct: 578 ASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMID 637

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           +Y +  +  EA  +F  ++ + I  N  ++  M+ +Y K   ++ A  + +EMQ  G+  
Sbjct: 638 LYSDHCMVKEACEVFDSLKVRGI-ANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLT 696

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             ++Y+++I ++   G+ + A  +F+K+ +S    +   +Q + V   R G+  +  R L
Sbjct: 697 QLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPNDATFQALKVILVRSGVTKNETRKL 756

Query: 358 HELRQPNT 365
             LR+ N+
Sbjct: 757 ELLRRNNS 764



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 24/327 (7%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           Q D  +  +   W  R+ G + +V+ YN +L   G+A  +   + L+  M    +  +  
Sbjct: 113 QKDWRRAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNS 172

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY T+I +  +      A   + +M  RG+ P+ +T S ++    KAG+ + A + F++ 
Sbjct: 173 TYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERW 232

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
            S  +                        R +      N     T I    +AG +E+ +
Sbjct: 233 SSDSI------------------------RRMEGRSHYNLYTYNTLIDTYGKAGHLEKVS 268

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             F Q    G    +  F  MI  + ++ +   V  +   M     FPD+    +++  Y
Sbjct: 269 DTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALY 328

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
            +  + + A+  Y +M+ E  V        +L  Y  R      E+L + +D    +  +
Sbjct: 329 RESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDE 388

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMN 532
                +  +Y     L  A R  +R +
Sbjct: 389 YTQSALTRMYVNVGMLEQAWRWFDRFH 415


>gi|414864940|tpg|DAA43497.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
          Length = 816

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 237/511 (46%), Gaps = 24/511 (4%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+V I DW   E  +  +V  YNVVL  V +A++W+L   L+ EM   G+APD  TY TL
Sbjct: 118 RAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNSTYGTL 177

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    + G   +A+ WL  M +  +  D V  S +++  +K  +Y  A   F R  S  I
Sbjct: 178 INVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSI 237

Query: 121 VP-------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
                    +L  YNT+I+ +GKA   ++      +M  +GV P  V+++++++ + ++H
Sbjct: 238 RRMEGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHH 297

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
           +  +  S+   M E  C  D  T NI+I +Y + D    A+  +W M+   + P VVS  
Sbjct: 298 RMEKVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCR 357

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           TLL  Y    +  +A  L + M  +    +  T + + ++Y      E+A        + 
Sbjct: 358 TLLYGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHH- 416

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLF-QKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
               N+  +S  I  +G+ G +  A   F   L+   + +       MI AY  VG++  
Sbjct: 417 --HMNSECFSANIDAFGEKGYIVLAEKAFVCCLKKKMISVSAC--NVMIKAYGLVGMLDE 472

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  + + + +    P+ +   + I +L+ A   ++A +   +      + D   +  +I 
Sbjct: 473 ACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVIS 532

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
            F++N        +F +M  +G  PD  + ++++++Y ++   + A   +  M+++G   
Sbjct: 533 SFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYE 592

Query: 469 SDQVHFQMLSLYG-------ARKDFNMLESL 492
           +  ++  ++ LY        AR  + +L+SL
Sbjct: 593 NVTIYNSLIKLYTKVGYVPEARGAYKLLKSL 623



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 216/486 (44%), Gaps = 65/486 (13%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E R   +++ YN ++    +A   E     F++M   G+AP   T++++I  +GK    +
Sbjct: 241 EGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRME 300

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              S ++ ME+ +   D   Y+ LI L R+  D   A   + ++K+  +VPD+V+  T++
Sbjct: 301 KVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLL 360

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV---------------ENHKFV 176
             +    +  +A  L++EM E+G   D  + S L  +YV                +H   
Sbjct: 361 YGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNS 420

Query: 177 EALS------------VFAEMNEVNC----PLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           E  S            V AE   V C     + ++ CN+MI  YG + M  +A  +   M
Sbjct: 421 ECFSANIDAFGEKGYIVLAEKAFVCCLKKKMISVSACNVMIKAYGLVGMLDEACEIANGM 480

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +  I P  V+Y +L+++   A+L  +AI+    M+  ++  + + Y+ +I  + K+ + 
Sbjct: 481 ERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDL 540

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             +  L +EM   G+ P+   YS +I  + + G + +A+  F  ++  G+  +  +Y ++
Sbjct: 541 RMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSL 600

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           I  Y +VG V  A+     L+  +T     AI                           +
Sbjct: 601 IKLYTKVGYVPEARGAYKLLKSLDT----NAI---------------------------L 629

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD-SHIIALVLNSYGKLREFETADDLYS 459
               CMI+L+S +       EVF+ ++  G   + SH  A+++  Y K+  ++ A  +  
Sbjct: 630 YASNCMIDLYSDHCMVKEACEVFDSLKVRGIANEFSH--AMMVCMYKKVGRYDVAHRVCK 687

Query: 460 EMQEEG 465
           EMQ  G
Sbjct: 688 EMQALG 693



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 150/308 (48%), Gaps = 1/308 (0%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           + +I  +G  GM D A      ME+  +  D V Y++LI+L        KAI    ++K 
Sbjct: 458 NVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKV 517

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
             ++ D + Y+ +I+ F K    + +  L  EM   GV+PD   YS L++ Y E     +
Sbjct: 518 VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQ 577

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A + F  M +     ++T  N +I +Y ++    +A   +  ++ +  +  + + N ++ 
Sbjct: 578 ASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMID 637

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           +Y +  +  EA  +F  ++ + I  N  ++  M+ +Y K   ++ A  + +EMQ  G+  
Sbjct: 638 LYSDHCMVKEACEVFDSLKVRGI-ANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLT 696

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             ++Y+++I ++   G+ + A  +F+K+ +S    +   +Q + V   R G+  +  R L
Sbjct: 697 QLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPNDATFQALKVILVRSGVTKNETRKL 756

Query: 358 HELRQPNT 365
             LR+ N+
Sbjct: 757 ELLRRNNS 764



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 24/327 (7%)

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           Q D  +  +   W  R+ G + +V+ YN +L   G+A  +   + L+  M    +  +  
Sbjct: 113 QKDWRRAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNS 172

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY T+I +  +      A   + +M  RG+ P+ +T S ++    KAG+ + A + F++ 
Sbjct: 173 TYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERW 232

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
            S  +                        R +      N     T I    +AG +E+ +
Sbjct: 233 SSDSI------------------------RRMEGRSHYNLYTYNTLIDTYGKAGHLEKVS 268

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
             F Q    G    +  F  MI  + ++ +   V  +   M     FPD+    +++  Y
Sbjct: 269 DTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALY 328

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK 505
            +  + + A+  Y +M+ E  V        +L  Y  R      E+L + +D    +  +
Sbjct: 329 RESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDE 388

Query: 506 ELHHVVAGIYERANRLNDASRIMNRMN 532
                +  +Y     L  A R  +R +
Sbjct: 389 YTQSALTRMYVNVGMLEQAWRWFDRFH 415


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 219/463 (47%), Gaps = 22/463 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  Y  ++   L   QW+    +  EM   G+ PD +TY  L+    K+G    A   
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M +  +  D+ +Y  ++         S+  S    +  +GI P+   +N +   F K
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
             +  EA  +  +MR+QG+ P+ V+Y+TL++   +  +  +A   F +M NE   P    
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP---- 447

Query: 196 TCNIMID---VYG--QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             NI++    VYG   +D  + A  LF+ M   GI P+VV +NT++          +A  
Sbjct: 448 --NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L  LM+R     ++++YN +I+ +    + ++A+ L+  M + G++PN  TY+T++  + 
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           + G++D A  +FQ++ S+G+    V Y T++    +    + AK L   +    +Q +  
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +  L++   ++EA  +F+         DI  F  MI    ++ +  + + +F  +
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 427 RSAGYFPDS---HIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            + G  PD     +IA  L   G L EF   D ++SEM++ GC
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEF---DGMFSEMEKSGC 725



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 210/462 (45%), Gaps = 9/462 (1%)

Query: 12  EARYSPSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           E   +P+V +YN +L+      RA++  EL H + D  + R   P+  +Y+T+I  F  E
Sbjct: 159 ELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG-QVRSCPPNLVSYNTVINGFFTE 217

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A +    M    +  ++V Y+ +I+   K     +A  +F ++   G+ P++V Y
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I+ +     +KE   +++EM   G++PD  +Y  LL+   +  K  EA  +F  M  
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D++   I++  Y       +       M   GI P+   +N +   + +  + GE
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  M+++ +  NVV Y T+I    K    + A     +M N G+ PN + +++++ 
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVY 457

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
                 K ++A  LF ++ + G+  + V + T++      G V  A+RL+  + +  T P
Sbjct: 458 GLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517

Query: 368 RETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
              +   L R     G+ +EA+ +       G   +   +  ++  + R+ +  +   VF
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++M S G  P       +L+   K R F  A +LY  M   G
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 190/407 (46%), Gaps = 6/407 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+ + +N+V     +      A  +F++MRQ+G++P+   Y+TLI    K G  D A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT-MINVF 134
              QM  + V+ ++V++++L+     +  + KA  +F  + + GI P++V +NT M N+ 
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + ++ K  RL I+ M   G +PD +SY+ L+  +    K  EA  +   M  V    + 
Sbjct: 496 TEGRVMKAQRL-IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNE 554

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++  Y +     DA  +F  M   GI P VV+YNT+L    +   F EA  L+  
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLN 614

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M     + ++ TYN ++    K+   ++A  + Q + ++ ++ + IT++ +I    K G+
Sbjct: 615 MITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGR 674

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            + A  LF  + ++G+  D   Y+ +       G +     +  E+ +    P    +  
Sbjct: 675 KEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNF 734

Query: 375 LAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           L R     G I  A     +  +     + S    +I LFSR +  A
Sbjct: 735 LVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQA 781



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 186/431 (43%), Gaps = 83/431 (19%)

Query: 50  IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           +APD +TYS L+ CF + G          ++E    +  L+L                  
Sbjct: 90  VAPDVFTYSILVGCFCRMG----------RLEHGFAAFGLIL------------------ 121

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNL 168
                 K+   V D+V  N ++     AK   EA  +L+  M E G  P+ VSY+TLL  
Sbjct: 122 ------KTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKG 175

Query: 169 YVENHKFVEALSVFAEMNEV---NCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRK 222
           + + ++  EAL +   M +    +CP +L + N +I+ +   GQ+D A +   LF  M  
Sbjct: 176 FCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYN---LFLDMTD 232

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            GI P+VV+Y  ++    +A++   A  +F+ M  K +  N+VTY  +I  Y    + ++
Sbjct: 233 QGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKE 292

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI- 341
              +++EM   G+EP+  TY  ++    K GK   A  LF  +   G++ D  +Y  ++ 
Sbjct: 293 VVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILH 352

Query: 342 ----------------------------------VAYERVGLVAHAKRLLHELRQ----P 363
                                              A+ +  ++  A  + +++RQ    P
Sbjct: 353 GYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSP 412

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +   T I  L + GR+++A   F Q  + G   +I VF  ++       K+    E+F
Sbjct: 413 NVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELF 472

Query: 424 EKMRSAGYFPD 434
            +M + G  P+
Sbjct: 473 FEMVNQGIHPN 483



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 11/321 (3%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           V PD  +YS L+  +    +     + F  + +    ++       + + G  D  +  +
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRL-LKGLCDAKRVGE 148

Query: 215 RLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---QRKEIEQNVVTYN 268
            +   +R+M   G  P+VVSYNTLL+ + +     EA+ L  +M   Q +    N+V+YN
Sbjct: 149 AMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYN 208

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T+I  +    + +KA NL  +M ++GI PN +TY+ +I    KA  +DRA  +FQ++   
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV  + V Y  +I  Y  +G      R+L E+     +P+       +  L + G+  EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +F      G   D+S++G ++  ++     + +    + M   G  P+ +I  +V  +
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 445 YGKLREFETADDLYSEMQEEG 465
           + K      A D++++M+++G
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQG 409



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 35/304 (11%)

Query: 235 LLRVYGEAELFGEAIH-LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM--- 290
           LL+   +A+  GEA+  L R M       NVV+YNT++K +      E+A  L+  M   
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           Q R   PN ++Y+T+I  +   G++D+A  LF  +   G+                    
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIP------------------- 236

Query: 351 AHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
                       PN +     I  L +A  ++ A  VF+Q  D G   +I  + C+I  +
Sbjct: 237 ------------PNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGY 284

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
               ++  V+ + ++M + G  PD     L+L+   K  +   A  L+  M  +G     
Sbjct: 285 LSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDV 344

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            ++  +L  Y  +   + + S  + +  +       + ++V   + +   + +A  I N+
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404

Query: 531 MNKR 534
           M ++
Sbjct: 405 MRQQ 408


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 197/424 (46%), Gaps = 49/424 (11%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFD 71
           R  P VF+YN++L  +    + + A  L   M   G    PD  +YST+I  F KEG  D
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                  +M   R+S ++V Y+++I    K     KA+ + + +  SG++PD + YN+++
Sbjct: 106 -------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F  +   KEA + +++MR  GV+PD V+Y++L++   +N +  EA  +F         
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD-------- 210

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                      SM K G+ P + +Y TLL+ Y       E   L
Sbjct: 211 ---------------------------SMTKRGLKPDITTYGTLLQGYATKGALVEMHGL 243

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM R  I  N   ++ ++  Y K  + E+A  +  +M+ +G+ PNA+TY T+I +  K
Sbjct: 244 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCK 303

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIP 367
           +G+++ A + F+++   G+  D ++Y ++I +         A+ L  E+       +TI 
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK-YANVIEVFEKM 426
             + I    + GR+ E+  +F      G   DI   G  +    R+   + N+  +F  M
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNM 423

Query: 427 RSAG 430
            + G
Sbjct: 424 SNTG 427



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 196/471 (41%), Gaps = 74/471 (15%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E A  +FDE+ +RGI PD ++Y+ L+     E     A+  L  M  D   GD       
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADD--GGD------- 83

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                     PD+V+Y+T+IN F     FKE  L  ++M +Q +
Sbjct: 84  ------------------------CPPDVVSYSTVINGF-----FKEGDL--DKMLDQRI 112

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P+ V+Y++++    +     +A+ V   M +     D  T N ++  +      K+A  
Sbjct: 113 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV 172

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
               MR  G++P VV+YN+L+    +     EA  +F  M ++ ++ ++ TY T+++ Y 
Sbjct: 173 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYA 232

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                 +   L+  M   GI PN   +S ++  + K  K++ A ++F K+R  G+     
Sbjct: 233 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL----- 287

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
                                      PN +   T I +L ++GR+E+A   F Q  D G
Sbjct: 288 --------------------------NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D  V+  +I       K+    E+F +M   G    +     +++S+ K      + 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
            L+  M   G V  D +      L  AR+D+++  +++    + SN   KE
Sbjct: 382 KLFDLMVRIG-VKPDIITLGRF-LGSARRDYSLFVNIYFIFTNMSNTGDKE 430



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP+V  YN ++  + +A+  + A  +   M + G+ PD  TY++++  F   G   
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI +L++M  D V  D+V Y++L++   K    ++A  IF  +   G+ PD+  Y T++
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLL 228

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             +       E   L++ M   G+ P+   +S L+  Y +  K  EA+ VF++       
Sbjct: 229 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK------- 281

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                       MR+ G++P+ V+Y T++ V  ++    +A+  
Sbjct: 282 ----------------------------MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  + +  + + YN++I       + EKA  L  EM +RGI  + I +++II    K
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPV 335
            G++  +  LF  +   GV+ D +
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDII 397



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 25/406 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN ++  + +  +   A  +FD M +RG+ PD  TY TL+  +  +G        
Sbjct: 184 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGL 243

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++ +  +  ++S L+    K     +A+ +FS+++  G+ P+ V Y T+I+V  K
Sbjct: 244 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCK 303

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   ++A L  E+M ++G++PD++ Y++L++      K+ +A  +F EM +    L    
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID + +     ++ +LF  M ++G+ P ++   TL R  G A              
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDII---TLGRFLGSA-------------- 406

Query: 257 RKEIEQNVVTY---NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           R++    V  Y     M     K  E    TN      N    P   TY+ I+    K  
Sbjct: 407 RRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNK 466

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
             D A  +FQ L    ++++   +  MI A  +VG    AK L         +P      
Sbjct: 467 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 526

Query: 374 ILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMI-ELFSRNK 414
           ++A      G +EE   +F    D G   D  +   ++ EL  R +
Sbjct: 527 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 572


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 227/512 (44%), Gaps = 43/512 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  + EEA   P   AY V++    R  + + A  L DEM + G+  + +  ++LI  +
Sbjct: 284 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 343

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    A   + +M    +  D   Y+ L++   +    S+A ++  ++   GI P +
Sbjct: 344 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 403

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT++    +   F +A  +   M ++GV PD V YSTLL+   +   F  A +++ +
Sbjct: 404 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 463

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +          T N MI    ++    +A+ +F  M+ +G  P  ++Y TL+  Y +A  
Sbjct: 464 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 523

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            G+A  +   M+R+ I  ++  YN++I    KS    + T+L+ EM  RG+ PN +TY  
Sbjct: 524 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGA 583

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I  W K G LD+A   + ++  +G+  + ++  TM+    R+G +  A  L+ ++    
Sbjct: 584 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 643

Query: 363 ----------------------------------PNTIPRETAITILARAGRIEEATWVF 388
                                             PN I    AI  L + G++++A   F
Sbjct: 644 FFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 703

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF---EKMRSAGYFPDSHIIALVLNSY 445
                 G V D   +  +I  +S      NV E F   ++M   G  P+      ++N  
Sbjct: 704 SMLSLKGFVPDNFTYCTLIHGYS---AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            K    + A  L+ ++ ++G +F + V +  L
Sbjct: 761 CKSENVDRAQRLFHKLHQKG-LFPNVVTYNTL 791



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 213/455 (46%), Gaps = 7/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N +L N+++  +   AH ++ +M + GI PD +  S ++  F K+G  D A  +
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 214

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   V  ++V Y +LI     L D   A  +   +   G+  ++V Y  +I  + K
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EA  ++  M+E+  + PD  +Y  L++ Y    K  +A+ +  EM  +    +L 
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN +I+ Y +     +A+ +   M    + P   SYNTLL  Y       EA +L   M
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ IE  V+TYNT++K   +    + A  +   M  RG+ P+ + YST++    K    
Sbjct: 395 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 454

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           + A+ L++ + + G     + + TMI    ++G +  A+ +  +++     P+ I   T 
Sbjct: 455 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 514

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I    +A  + +A  V + A +   +   I ++  +I    ++++   V ++  +M   G
Sbjct: 515 IDGYCKASNVGQAFKV-KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             P+      +++ + K    + A   Y EM E G
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 608



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/493 (22%), Positives = 215/493 (43%), Gaps = 36/493 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F  N ++    +  +   A G+   M    + PD Y+Y+TL+  + +EG    A +  
Sbjct: 332 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M Q+ +   ++ Y+ L++   ++  +  A+ I+  +   G+ PD V Y+T+++   K 
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           + F+ A  L +++  +G     ++++T+++   +  K VEA  +F +M ++ C  D  T 
Sbjct: 452 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 511

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +ID Y +      A ++  +M +  I PS+  YN+L+    ++    E   L   M  
Sbjct: 512 RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 571

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  N+VTY  +I  + K    +KA +   EM   G+  N I  ST+++   + G++D 
Sbjct: 572 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631

Query: 318 AAMLFQKLRSSGVEIDP--------------------------------VLYQTMIVAYE 345
           A +L QK+   G   D                                 ++Y   I    
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 691

Query: 346 RVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G V  A+R    L     +P      T I   + AG ++EA  +  +    G V +I 
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 751

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I    +++       +F K+   G FP+      +++ Y K+   + A  L  +M
Sbjct: 752 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811

Query: 462 QEEGCVFSDQVHF 474
            EEG   S Q + 
Sbjct: 812 IEEGISPSIQCNL 824



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 159/356 (44%), Gaps = 33/356 (9%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W +  AR ++ S   +N ++  + +  +   A  +FD+M+  G +PD  TY TLI  + K
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
                 A      ME++ +S  + +Y++LI    K     +   + + +   G+ P++V 
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL------------NLYVE--- 171
           Y  +I+ + K  +  +A     EM E G+  + +  ST++            NL ++   
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640

Query: 172 NHKFVE-------------ALSVFAEMNEVNCPLDLTTCNIM--IDVYGQLDMAK--DAD 214
           +H F               A+   A+  + +C   L   NI+  I + G     K  DA 
Sbjct: 641 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           R F  +   G  P   +Y TL+  Y  A    EA  L   M R+ +  N+VTYN +I   
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
            KS   ++A  L  ++  +G+ PN +TY+T+I  + K G +D A  L  K+   G+
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 204/452 (45%), Gaps = 30/452 (6%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           + VLRN+       L  G F  + +Q+   P+  +Y  L+    +  M+D   ++L Q+ 
Sbjct: 38  DAVLRNLRLNPTASL--GFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV 95

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                 DL  + +     R    + + + ++     S  V D++     + V+ +  L K
Sbjct: 96  ------DLCKFKD-----RGNVIWDELVGVYREFAFSPTVFDMI-----LKVYVEKGLTK 139

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  + + M + G  P   S ++LLN  V+N +   A  V+ +M  V    D+   +IM+
Sbjct: 140 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGEAIHLFRLMQRK 258
           + + +     +A      M  +G++P++V+Y++L+  Y   G+ E    A  + + M  K
Sbjct: 200 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE---AAKGVLKFMSEK 256

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDR 317
            + +NVVTY  +IK Y K  + ++A  +++ MQ    + P+   Y  +I  + + GK+D 
Sbjct: 257 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDD 316

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAIT 373
           A  L  ++   G++ +  +  ++I  Y + G +  A+ ++  +     +P++    T + 
Sbjct: 317 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLD 376

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              R G   EA  +  +    G    +  +  +++   R   + + ++++  M   G  P
Sbjct: 377 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           D    + +L+   K+  FE A  L+ ++   G
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARG 468



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 13/293 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SPS+  YN ++  + ++++      L  EM  RG+ P+  TY  LI  + KEGM 
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S   +M ++ +S ++++ S ++    +L    +A  +  ++   G  PD       
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH------ 648

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK----PDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
              F K+ +   A   I +  ++  K    P+ + Y+  +    +  K  +A   F+ ++
Sbjct: 649 -ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 707

Query: 187 -EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +   P + T C  +I  Y       +A RL   M + G+ P++V+YN L+    ++E  
Sbjct: 708 LKGFVPDNFTYCT-LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             A  LF  + +K +  NVVTYNT+I  Y K    + A  L  +M   GI P+
Sbjct: 767 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 34/263 (12%)

Query: 1   RSVAILDWINEEA--RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           R V + D + E      +P++  Y  ++    +    + A   + EM + G++ +    S
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 617

Query: 59  TLITCFGKEGMFDSAISWLQQMEQDRVSGDL-------VLYSNLIELARKLSD------- 104
           T+++   + G  D A   +Q+M       D        + Y+ + ++A  L +       
Sbjct: 618 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 677

Query: 105 -----YSKAIS-------------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
                Y+ AI+              FS L   G VPD   Y T+I+ +  A    EA  L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
            +EM  +G+ P+ V+Y+ L+N   ++     A  +F ++++     ++ T N +ID Y +
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 207 LDMAKDADRLFWSMRKMGIDPSV 229
           +     A +L   M + GI PS+
Sbjct: 798 IGNMDAAFKLKDKMIEEGISPSI 820


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 7/393 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P  F +N +L ++++ K++     LF +    GI PD  T S LI CF  +     A
Sbjct: 53  RPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLA 112

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S    + +     D +  + LI+      +  K +    ++ + G   D V+Y T+IN 
Sbjct: 113 FSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLING 172

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             KA   K    L+ ++    VKPD V Y+T++N   +N    +A  V++EM       D
Sbjct: 173 LCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 232

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGEAIH 250
           + T   +I  +  +   K+A  L   M+   I+P V +++ L+      G+ ++  EA+ 
Sbjct: 233 VVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMS 292

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF  M+ K +  ++VTYN++I    K+   E+A  L++EM+  GI+P+  +Y+ ++    
Sbjct: 293 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 352

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G+L+ A   FQ L   G  ++   Y  MI    + GL   A  L  ++      PN I
Sbjct: 353 KGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAI 412

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
              T I  L+     ++A  + R+    G +K+
Sbjct: 413 TFRTIICALSEKDENDKAEKILREMIARGLLKE 445



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 179/400 (44%), Gaps = 7/400 (1%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++    M   R      L++N++    K   Y   IS+F + + +GI PDL   + +IN
Sbjct: 42  AVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 101

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F        A  +   + ++G  PD ++ +TL+       +  + L    ++      L
Sbjct: 102 CFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQL 161

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  +   +I+   +    K   RL   +    + P VV YNT++    + +L G+A  ++
Sbjct: 162 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 221

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M  K I  +VVTY T+I  +    + ++A +L+ EM+ + I P+  T+S +I   GK 
Sbjct: 222 SEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKE 281

Query: 313 GK---LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           GK   +D A  LF++++   +  D V Y ++I    +   +  A  LL E+++    P  
Sbjct: 282 GKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341

Query: 370 TAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
            + TIL     + GR+E A   F+     G   ++  +  MI    +   +   +++  K
Sbjct: 342 YSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSK 401

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           M   G  P++     ++ +  +  E + A+ +  EM   G
Sbjct: 402 MEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 146/317 (46%), Gaps = 7/317 (2%)

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P T  ++ +L+  V+N ++   +S+F +        DL T +I+I+ +        A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F ++ K G  P  ++ NTL++         + ++    +  +  + + V+Y T+I    K
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           + E +    L+++++   ++P+ + Y+TII    K   L  A  ++ ++   G+  D V 
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGR---IEEATWVFR 389
           Y T+I  +  +G +  A  LL+E++  N  P        I  L + G+   ++EA  +F 
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +      + DI  +  +I+   +N      I + ++M+  G  PD +   ++L+   K  
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 450 EFETADDLYSEMQEEGC 466
             E A + +  +  +GC
Sbjct: 356 RLEIAKEFFQHLLVKGC 372



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 117/281 (41%), Gaps = 7/281 (2%)

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P+ + T  +    + Q      A   F  M  M   P    +N +L    + + +   I 
Sbjct: 20  PIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVIS 79

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LF+  +   I  ++ T + +I  +        A ++   +  RG  P+AIT +T+I    
Sbjct: 80  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLC 139

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
             G++ +      ++ + G ++D V Y T+I    + G      RLL +L     +P+ +
Sbjct: 140 FRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV 199

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I  L +   + +A  V+ +    G   D+  +  +I  F    K      +  +M
Sbjct: 200 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEM 259

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADD---LYSEMQEE 464
           +     PD +  ++++++ GK  + +  D+   L+ EM+ +
Sbjct: 260 KLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHK 300



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+L  + E     P V++Y ++L  + +  + E+A   F  +  +G   + + Y+ +
Sbjct: 324 RAIALLKEMKEHG-IQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVM 382

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K G+F  A+    +ME      + + +  +I    +  +  KA  I   + + G+
Sbjct: 383 INGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442

Query: 121 V 121
           +
Sbjct: 443 L 443


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 206/451 (45%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P     N +++ +    Q + A    D++  +G   ++ +Y+TLI    K G    AI
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++++      ++ +YS +I+   K    S+A  +FS +   GI  D+V Y+T+I  F
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 KEA  L+ EM  + + P+  +Y+ L++   +  K  EA SV A M +     D+
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  +   K A  +F +M  MG+ P V +Y  L+  + + ++  EA++LF+ 
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +K +   +VTY+++I    KS       +L+ EM++RG   + ITYS++I    K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           LDRA  LF K++                                E+R PN       +  
Sbjct: 425 LDRAIALFNKMKD------------------------------QEIR-PNIFTFTILLDG 453

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR+++A  VF+     G   ++  +  MI    +       + +  KM   G  P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     ++ +  K  E + A+ L  +M   G
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 222/478 (46%), Gaps = 5/478 (1%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R++P +  +N +L +  + K +  A  L   +  +GI PD  T + LI CF   G     
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            S L ++ +     D V  + LI+         KA+    +L + G   + V+Y T+IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K    + A  L+ ++  +  KP+   YST+++   +     EA  +F+EM       D
Sbjct: 174 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + +I  +      K+A  L   M    I+P+V +YN L+    +     EA  +  
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +M +  ++ +V+TY+T++  Y    E +KA ++   M   G+ P+  TY+ +I  + K  
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---QP-NTIPRE 369
            +D A  LF+++    +    V Y ++I    + G + +   L+ E+R   QP + I   
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYS 413

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + G ++ A  +F +  D     +I  F  +++   +  +  +  EVF+ + + 
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK 473

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           GY  + +   +++N + K    E A  + S+M++ GC+  +   F+ + +   +KD N
Sbjct: 474 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI-PNAFTFETIIIALFKKDEN 530



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 156/315 (49%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  V  Y+ ++       + + A GL +EM  + I P+ YTY+ L+    KEG    A S
Sbjct: 231 SADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M +  V  D++ YS L++    + +  KA  +F+ +   G+ PD+  Y  +IN F 
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K+  EA  L +EM ++ + P  V+YS+L++   ++ +      +  EM +   P D+ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T + +ID   +      A  LF  M+   I P++ ++  LL    +     +A  +F+ +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    NV TYN MI  + K    E+A  ++ +M++ G  PNA T+ TII    K  + 
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 316 DRAAMLFQKLRSSGV 330
           D+A  L +++ + G+
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 192/428 (44%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ ++  F K   + +A+S   ++E   +  DL+  + LI     
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +   +   S+ +++   G  PD V  NT+I         K+A    +++  QG + + VS
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+N   +      A+ +  +++      ++   + +ID   +  +  +A  LF  M 
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 226

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI   VV+Y+TL+  +       EAI L   M  K I  NV TYN ++    K  + +
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +++  M    ++P+ ITYST++  +    ++ +A  +F  +   GV  D   Y  +I
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             + +  +V  A  L  E+ Q N +P      + I  L ++GRI     +  +  D G+ 
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQP 406

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +I+   +N      I +F KM+     P+     ++L+   K    + A ++
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466

Query: 458 YSEMQEEG 465
           + ++  +G
Sbjct: 467 FQDLLTKG 474



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 39/364 (10%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+S F+R+      P ++ +N +++ F K K +  A  L   +  +G++PD ++ + L+N
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +    +     SV A+                                   + K G  P
Sbjct: 103 CFCHMGQITFGFSVLAK-----------------------------------ILKRGYPP 127

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             V+ NTL++         +A+H    +  +  + N V+Y T+I    K  +   A  L+
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL 187

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           +++  R  +PN   YSTII    K   +  A  LF ++   G+  D V Y T+I  +   
Sbjct: 188 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G +  A  LL+E+      PN       +  L + G+++EA  V      A    D+  +
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +++ +    +      VF  M   G  PD H   +++N + K +  + A +L+ EM +
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 464 EGCV 467
           +  V
Sbjct: 368 KNMV 371



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 35/284 (12%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P V  Y+ ++       + + A  +F+ M   G+ PD +TY+ LI  F K  M D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++  ++M Q  +   +V YS+LI+                 L  SG +P +       
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLID----------------GLCKSGRIPYVWD----- 395

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                         LI+EMR++G   D ++YS+L++   +N     A+++F +M +    
Sbjct: 396 --------------LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T  I++D   +    KDA  +F  +   G   +V +YN ++  + +  L  EA+ +
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
              M+      N  T+ T+I    K  E++KA  L+++M  RG+
Sbjct: 502 LSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/121 (19%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++A+ + + ++    P++F + ++L  + +  + + A  +F ++  +G   + YTY+ +
Sbjct: 427 RAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G+ + A++ L +ME +    +   +  +I    K  +  KA  +  ++ + G+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545

Query: 121 V 121
           +
Sbjct: 546 L 546


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 211/464 (45%), Gaps = 25/464 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V ++N++LR       +E+ + L  EM+ RGI  +  T+  +++        D A+S+
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSY 185

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +  ++    L  Y+ L++   K     +A  +F  +   G  PD++AY+++I+   K
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EAR L++ M  +G  P  V+Y++++    +  +  EA+    EM        + T
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 305

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMG---IDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + +  V G + M K  ++ F  M +M      P  +SY   +          EA  +F 
Sbjct: 306 YSFI--VTGYIGMGK-VEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 362

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K  + ++ TY  +I  + K      AT++++ M    ++PN   Y+ I+  + K+ 
Sbjct: 363 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 422

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR------QPNTIP 367
           +L+ A  L+Q++   G+    V Y T+I A  ++  +  A  LL E++      +P+ + 
Sbjct: 423 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G  E A  +  +  D G + D   +  +I+  +   K +  +E+ E+M 
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542

Query: 428 SAGYFPDSHIIALVLNSYGKL------REFETADDLYSEMQEEG 465
            AG FPD H       +YG L       + + A DL  EM   G
Sbjct: 543 KAGIFPDDH-------TYGTLVQILCRSDVDAAWDLLQEMMRNG 579



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 179/370 (48%), Gaps = 3/370 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P + AY+ ++  + +A + + A  L D M  RG  P    Y++++    K G    A+
Sbjct: 229 YKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAV 288

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             +Q+M + R+   +  YS ++     +    KA ++   +      PD ++Y   I   
Sbjct: 289 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEAL 348

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 +EA  + E M E+G KPD  +Y  +++ + +      A  V   M++     + 
Sbjct: 349 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 408

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
               +++D + +    ++A  L+  + K GI PS V+YNT++    + +   EA+ L R 
Sbjct: 409 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 468

Query: 255 MQRK--EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           MQR+  E+E ++VTY+ +I   GK    E+A +L+ EM + G+ P+  TY+++I     A
Sbjct: 469 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 528

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK+ RA  L +++  +G+  D   Y T++    R  + A A  LL E+ +    P E   
Sbjct: 529 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDA-AWDLLQEMMRNGHTPNEFTF 587

Query: 373 TILARAGRIE 382
             + +  R++
Sbjct: 588 KAVEKGFRLQ 597



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 206/500 (41%), Gaps = 49/500 (9%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGK 66
           W      +S ++F  N +L  ++R      A G F    Q  I+ P+  +++ L+  F  
Sbjct: 85  WAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFF----QSSISEPNVSSFNILLRGFAA 140

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
              F+   + L++M+   ++ +   +  ++       D  KA+S F+ +  +   P L  
Sbjct: 141 RDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFT 200

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y  +++   KA                                   HK   A  VF EM 
Sbjct: 201 YTVLVDGLCKA-----------------------------------HKVERACDVFEEMI 225

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                 D+   + +ID   +     +A +L   M   G  P+ V+Y +++    +     
Sbjct: 226 RKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQ 285

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA+   + M+R+ +   V TY+ ++  Y    + EKA  +M+EM +R   P+ I+Y+  I
Sbjct: 286 EAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFI 345

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
                 G+ + A  +F+ +   G + D   Y  +I  + + G +A A  +L  + +    
Sbjct: 346 EALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVK 405

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P     T++     ++ R+EEA  ++++    G +     +  +I    + KK    +E+
Sbjct: 406 PNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 465

Query: 423 FEKM--RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--S 478
             +M  R     P     +++++  GK+   E A DL +EM + G V  D   +  L  +
Sbjct: 466 LREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNG-VIPDCFTYTSLIQT 524

Query: 479 LYGARKDFNMLESLFERLDS 498
           L GA K    +E L E L +
Sbjct: 525 LAGAGKVSRAMELLEEMLKA 544


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 236/537 (43%), Gaps = 5/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+++ LD +++       +FAY+ +L ++ R          +  M   G+ P+   Y+ +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G    A + ++++ +  +S D   Y+++I    +  D   A+ +F+++   G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+ V Y+T+IN    +    EA  LI EM   G+ P   + +  +    +   + +A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M    C  ++ T   +I       + K A  LF  M + G+ P+ V+YN L+ +  
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E      A  +  LM R     N+VTYN MIK Y    + +KA  +M  M  RG   N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII  +  +G    A  +   +R  G + D   Y  +I  + ++  +  A  L +E+
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 361 RQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P E   T L     +  +++ AT +      +G   ++  +  +I   ++   +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
           +   E+ + M   G FP+      +++   K      A +++++M E+GC+ +   +  +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +   G        E+LF  L+    I  +  +  +   Y  + ++  A   + RM K
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 201/459 (43%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP  F Y  ++    R    + A  +F++M + G  P+  TYSTLI      G  +
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +++M    +       +  I     +  Y  A  +F  +K+ G  P++  Y  +I
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    + L K A  L   M   GV P+TV+Y+ L+N+ VEN +   A  V   M    C 
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N MI  Y  L   K A  +  +M + G   ++V+YNT+++ Y ++     A+ +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM+    + +  +Y  +I  + K  + E A  L  EM + G+ PN +TY+ +I  + K
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
             KLD A  L + ++ SG   +   Y  +I    +    + A+ L   + +    PN + 
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G    A  +F +  + G + ++  +  +I    +  K      +F ++ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G  PD      ++ +Y    + E A +    M + GC
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 214/488 (43%), Gaps = 36/488 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ Y  ++  +  +   ++A GLF  M + G+ P+  TY+ LI    +      A   
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++  S ++V Y+ +I+    L D  KA+ + + +   G   +LV YNT+I  +  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
           +     A  +++ MR+ G KPD  SY+ L+  + +  K   A  +F EM ++  CP ++T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID Y + +    A  L   M++ G  P+V +YN L+    +   F  A  L ++M
Sbjct: 533 Y-TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + I  NVVTY  MI    K+     A  +  +M  +G  PN +TYS++I   G+ GK+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           + A  LF +L   G+  D + Y  MI AY   G V HA   L  + +    P      +L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711

Query: 376 ARAGR----------------IEEATWVFRQAFDAGEVK-------------DISVFGCM 406
            +  +                +   ++ + Q  D   V               + V   +
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGY-QTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +   S   ++    E+   M S G  PD      +L S  ++R  + A  ++  M  +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830

Query: 467 VFSDQVHF 474
               +VH 
Sbjct: 831 ----EVHL 834



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 202/455 (44%), Gaps = 41/455 (9%)

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +C  KE M  + +S+L  + Q  +   L  YS L+    +L   +  +  + R+ S G+ 
Sbjct: 154 SCHSKEAMART-MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+L+ YN +IN   K     +A  +++++ E  + PDT +Y++++  +   H    AL V
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 182 FAEMNEVNCPLDLTTCNIMID-------------------VYGQLDMA------------ 210
           F +M +  C  +  T + +I+                   ++G L  A            
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 211 ----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               +DA RLF  M+  G +P+V +Y  L+     + L   AI LF  M R  +  N VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN +I I  ++   + A  ++  M   G  PN +TY+ +I  +   G   +A ++   + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIE 382
             G   + V Y T+I  Y   G    A R+L  +R     P E + T L     +  ++E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  +F +  D G   +   +  +I+ + +++K      + E M+ +G  P+     +++
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   K   F  A++L   M EEG +F + V +  +
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTAM 606



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN +++        + A  + + M QRG + +  TY+T+I  +   G   SA+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M       D   Y+ LI    K+S    A  +F+ +   G+ P+ V Y  +I+ + 
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +    A  L+E M+  G +P+  +Y+ L++   + + F  A  +   M E     ++ 
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   MID   +      A  +F  M + G  P++++Y++L+R  G+     EA +LF  +
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +R  +  + +TY  MI+ Y  S + E A N +  M   G +P   TY  +I
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 122/258 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S ++  YN +++    +     A  + D MR  G  PD ++Y+ LI  F K    +SA 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M  D +  + V Y+ LI+   K      A S+   +K SG  P++  YN +I+  
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F  A  L + M E+G+ P+ V+Y+ +++   +N     AL +F +M E  C  +L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I   GQ    ++A+ LF  + + G+ P  ++Y  ++  Y  +     A +    
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 255 MQRKEIEQNVVTYNTMIK 272
           M +   +  + TY  +IK
Sbjct: 696 MIKAGCQPTLWTYGVLIK 713



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 68/436 (15%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD +  +    P  ++Y  ++    +  + E A GLF+EM   G+ P+  TY+ LI  +
Sbjct: 482 ILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K+   D+A S L+ M++     ++  Y+ LI    K +++S A  +   +   GI P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V Y  MI+   K      A  +  +M EQG  P+ ++YS+L+    +  K  EA ++FAE
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +       D  T   MI+ Y      + A      M K G  P++ +Y  L++      L
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 245 FGEAIHLFRLMQRKEIEQN----------------------------VVTYNTMIKIYGK 276
             +     RL    ++  N                            V   N ++     
Sbjct: 721 LADQ----RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI---- 332
           +    +A  L+  M ++G+ P+   Y++++    +   +D A  +F+ + + G E+    
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 333 -------------------------------DPVLYQTMIVAYERVGLVAHAKRLLHELR 361
                                          D V+   +I    R G        LH + 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 362 QPNTIPRETAITILAR 377
               +P     TILAR
Sbjct: 897 TRRYMPSFHIYTILAR 912


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 230/526 (43%), Gaps = 79/526 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  ++YN+++  ++ A   E A  L ++M ++G+ PD  TY  +   F   G+   A   
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 77  LQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +Q+M  D  +  DLV Y+ LI    ++ +  +A+ +   L SSG   +++ Y+ +++   
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEV----- 188
           K     EA  L+ EM    ++PD V+YS L++   +  K  +A+ ++ EM  N +     
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 189 ----------------------------NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
                                       N   D+T  NIMID Y +L   ++A RL+  +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 221 RKMGIDPSVVSYNTLLRVYG--------EAELFGEAIHLFRL------------------ 254
           R   I PS+V++N+L  +YG        EA    E+I L  L                  
Sbjct: 458 RDKAITPSIVTFNSL--IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 255 -----------MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
                      M  K+IE  VVTY  +IK   K  + E++  L+++M+ +G+ P+ ITY+
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           TII  + KA  + +A  L   +    +E  P  Y  +I    R G V  A R+L  L+  
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           N    + A T + +A    G  + A  VF Q  + G    I  +  +I    +       
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              F  M S G  PD  I  ++LN++ +     +  +L + M + G
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 39/428 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P +  Y++++  + +  + + A  L+ EM    I P+ + +S ++    ++GM 
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 412

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A  +   +    +  D+ LY+ +I+   KL D  +A+ ++ RL+   I P +V +N++
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  F K +   EAR L+E ++  G++P  V+Y+TL+N Y E     +   +  EMN    
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN---- 528

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                               KD            I+P+VV+Y  +++   +     E++ 
Sbjct: 529 -------------------LKD------------IEPTVVTYTVVIKGLCKQRKLEESVQ 557

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M+ K +  + +TYNT+I+ + K+ +  KA  L+ +M    +EP   TY+ +I    
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN---TIP 367
           + G ++ A  +   L+   + +  V Y TMI A+   G    A ++ H++ +     +I 
Sbjct: 618 RYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK 677

Query: 368 RETA-ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +A I  L +   I EA + F      G   D  +F  M+  F R     +V E+   M
Sbjct: 678 DYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737

Query: 427 RSAGYFPD 434
              G   D
Sbjct: 738 IKFGLLHD 745



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 138/599 (23%), Positives = 249/599 (41%), Gaps = 82/599 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    PS+  YN +L N+   +  ++   ++++++  G      T S ++     +  F
Sbjct: 110 KEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRF 166

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +L+Q +    +  +V ++ ++    KL     A S F  +   GI+PD  +YN +
Sbjct: 167 RDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNIL 226

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYST------LLNLYVENHKFVEALSVFAE 184
           I+    A   +EA  L  +M +QG++PD V+Y        LL L     + ++ +     
Sbjct: 227 IHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKM----- 281

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           + +     DL T  ++I  + Q+   ++A RL   +   G   +V+ Y+ LL    +   
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             EA+ L   M+   ++ ++VTY+ +I    K  + ++A  L +EM    I PN+  +S 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           I+    + G L  A M F  L  S +  D  LY  MI  Y ++G V  A RL   LR   
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 363 --PNTIPRETAITILARAGRIEEA-------------------TWVFRQAFDAGEV---- 397
             P+ +   + I    +  ++ EA                   T +     + G +    
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH 521

Query: 398 --------KDIS----VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
                   KDI      +  +I+   + +K    +++ E MR+ G  PD      ++  +
Sbjct: 522 ELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCF 581

Query: 446 GKLREFETADDLYSEM---QEEGCVFSDQVHFQMLSLYGARKDFN-MLESLFERLDSDSN 501
            K ++   A +L  +M     E    +  V    L  YG  +D + +L SL      D N
Sbjct: 582 CKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL-----QDRN 636

Query: 502 INKKEL-------HHVVAGIYERANR-------------LNDASRIMNRMNKRRTFNSS 540
           IN  ++        H V G  +RA +             + D S ++NR+ KR   N +
Sbjct: 637 INLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 123/290 (42%), Gaps = 37/290 (12%)

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLL----------RVYGEAE--------------- 243
           M  DA  +   M++  + PS+ +YN+LL           VY + +               
Sbjct: 98  MVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIV 157

Query: 244 -------LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                   F +A+   R    KE   +VV++NT++  Y K    + A +    M   GI 
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P+  +Y+ +I     AG ++ A  L   +   G++ D V Y+ +   +  +GL++ A+ +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 357 LHEL-----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           + ++      +P+ +     I    + G IEEA  + R    +G   ++ ++  ++    
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +  +    +++  +M +    PD    +++++   K  + + A  LY EM
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387


>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 180/365 (49%), Gaps = 2/365 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y   +FAYN++L  + +  + +  + +F +M+++   PD YTY+ +I   GK G  D ++
Sbjct: 256 YKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESL 315

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL--KSSGIVPDLVAYNTMIN 132
           +  Q+M +   + +L+ Y+ +I+         K I +FS++  + S    +   Y  ++ 
Sbjct: 316 TLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVR 375

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K     EA  L   M     + D  +Y ++L    +  K  EAL + ++++E     
Sbjct: 376 TLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRIST 435

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    N ++   G+L    D   L+  M++ G  P + SYN L+  +G A    EA+ +F
Sbjct: 436 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 495

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++    + +++++N++I   GK+ + ++A    +EM+  G+ P+ +TYST+I  +GK 
Sbjct: 496 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 555

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            K++ A  LF ++ + G   + V Y  ++   ER G  A A  L  +L+Q    P     
Sbjct: 556 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615

Query: 373 TILAR 377
            +L R
Sbjct: 616 AVLER 620



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 193/406 (47%), Gaps = 6/406 (1%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           FD +++  +  + YTY  L+    +    + A     ++ +     D+  Y+ L++   K
Sbjct: 213 FDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAK 272

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
            +   +   +F  +K     PD   Y  MI + GK     E+  L +EM E+G  P+ ++
Sbjct: 273 DNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIA 332

Query: 162 YSTLLNLYVENHKFVEALSVFAEM-NEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           Y+T++     N    + + +F++M  EV N  ++ +    ++    +L  A +A RLF +
Sbjct: 333 YNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCN 392

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M     +    +Y ++L    +A    EA+ L   +  K I  + V YNT++   GK  +
Sbjct: 393 MWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKK 452

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
                +L ++M+  G  P+  +Y+ +I+ +G+AG+++ A  +F++L +S  + D + + +
Sbjct: 453 TSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNS 512

Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I    + G +  A     E+R+    P+ +   T I    +  ++E A  +F +    G
Sbjct: 513 LINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG 572

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
              +I  +  +++   R+ + A  ++++ K++  G  PDS   A++
Sbjct: 573 CSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 618



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 220/483 (45%), Gaps = 28/483 (5%)

Query: 13  ARYSPSVFAYNVVL-----RNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
            ++  + F YN +L      + LR +++ +L   + D+M + G+     T + LI  FG 
Sbjct: 146 PKFQHNSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGG 205

Query: 67  ----EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
               E  FD    W  QM       +   Y  L++   + ++ +KA  ++  L+  G   
Sbjct: 206 GADVERCFDLVKKWDLQM-------NCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKL 258

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+ AYN +++   K     +  ++ ++M+ +  +PD  +Y+ ++ +  +  K  E+L++F
Sbjct: 259 DIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLF 318

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM----RKMGIDPSVVSYNTLLRV 238
            EM E     +L   N MI       M      LF  M        ++ S+ +Y  L+R 
Sbjct: 319 QEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAY--LVRT 376

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +     EA  LF  M     E +   Y +M++    + +  +A +L+ ++  + I  +
Sbjct: 377 LSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTD 436

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            + Y+T+++  GK  K      L++K++  G   D   Y  +I ++ R G V  A ++  
Sbjct: 437 TVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFE 496

Query: 359 ELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           EL     +P+ I   + I  L + G I+EA   F++  + G   D+  +  +IE F +  
Sbjct: 497 ELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTD 556

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           K      +F++M + G  P+     ++L+   +      A DLY++++++G +  D + +
Sbjct: 557 KVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQG-LTPDSITY 615

Query: 475 QML 477
            +L
Sbjct: 616 AVL 618



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 136/265 (51%), Gaps = 4/265 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S++AY  ++R + +      AH LF  M       DR  Y +++      G    A+  L
Sbjct: 368 SIYAY--LVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 425

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            ++ + R+S D V+Y+ ++    KL   S    ++ ++K  G  PD+ +YN +I+ FG+A
Sbjct: 426 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 485

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              +EA  + EE+     KPD +S+++L+N   +N    EA   F EM E     D+ T 
Sbjct: 486 GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 545

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           + +I+ +G+ D  + A RLF  M   G  P++V+YN LL     +    EA+ L+  +++
Sbjct: 546 STLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQ 605

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEK 282
           + +  + +TY  + ++  +S  H+K
Sbjct: 606 QGLTPDSITYAVLERL--QSGSHQK 628



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 91/161 (56%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP +F+YN+++ +  RA + E A  +F+E+      PD  ++++LI C GK G  D A  
Sbjct: 469 SPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHM 528

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M ++ +S D+V YS LIE   K      A  +F  + + G  P++V YN +++   
Sbjct: 529 RFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLE 588

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           ++    EA  L  ++++QG+ PD+++Y+ L  L   +H+ V
Sbjct: 589 RSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKV 629



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/423 (20%), Positives = 184/423 (43%), Gaps = 13/423 (3%)

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
           +I   ++  G+   +   N +I +FG      +     + +++  ++ +  +Y  LL  +
Sbjct: 179 AILDDMERCGVRGSISTINILIGIFGGGA---DVERCFDLVKKWDLQMNCYTYKCLLQAH 235

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
           + ++   +A  V+ E+      LD+   N+++D   + +       +F  M++   +P  
Sbjct: 236 LRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDE 295

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA----TN 285
            +Y  ++R+ G+     E++ LF+ M  K    N++ YNTMI+    +   +K     + 
Sbjct: 296 YTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSK 355

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           ++ E+ N+ +  N   Y+ ++    K G    A  LF  + S   E D   Y +M+ +  
Sbjct: 356 MVVEVSNKFM--NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLC 413

Query: 346 RVGLVAHAKRLL---HELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             G    A  LL   HE R   +T+   T ++ L +  +  +   ++ +    G   DI 
Sbjct: 414 DAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIF 473

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I  F R  +    +++FE++ ++   PD      ++N  GK  + + A   + EM
Sbjct: 474 SYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEM 533

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
           +EEG       +  ++  +G      M   LF+ + ++        ++++    ER+ R 
Sbjct: 534 REEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRT 593

Query: 522 NDA 524
            +A
Sbjct: 594 AEA 596



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +   P + ++N ++  + +    + AH  F EMR+ G++PD  TYSTLI CFGK    
Sbjct: 499 ENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKV 558

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           + A     +M  +  S ++V Y+ L++   +    ++A+ ++++LK  G+ PD + Y
Sbjct: 559 EMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 44/87 (50%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP V  Y+ ++    +  + E+A  LFDEM   G +P+  TY+ L+ C  + G   
Sbjct: 535 EEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTA 594

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIEL 98
            A+    +++Q  ++ D + Y+ L  L
Sbjct: 595 EAVDLYAKLKQQGLTPDSITYAVLERL 621


>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
 gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 209/463 (45%), Gaps = 53/463 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P+   Y  ++  + R K+++   GL  EM + GI PD    + +I  F + G   
Sbjct: 85  EQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVK 144

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            A+   Q+ME+         ++ LI+   + RK  +  K + + +R  ++ + P+   YN
Sbjct: 145 EAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTR--TTNLKPNNRTYN 202

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            ++    K K  KEA  ++ +M   GV+PD V+Y+TL   Y ++ +  +A S+  +M   
Sbjct: 203 ILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNK 262

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               +  TC I++  Y +     +A R+ + MR +GI P                     
Sbjct: 263 KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHP--------------------- 301

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
                         N+V +N++IK +   G S   +KA  +M+E    G++P+ IT+STI
Sbjct: 302 --------------NLVIFNSLIKGFLDIGDSDGVDKALTMMEE---SGVKPDVITFSTI 344

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--- 362
           +  W  AG++D+   +F  +  SG+E D  ++  +   + R G    A+ LL+ + +   
Sbjct: 345 MNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGV 404

Query: 363 -PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PN +   T I+    AG++E+A  VF    D     ++  F  +I  +   K+     E
Sbjct: 405 RPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEE 464

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           + + M      P++  + LV  ++   R     +D  +E  EE
Sbjct: 465 ILQMMEEMNVVPENSTLKLVSEAW---RSIGMVNDAKAERTEE 504



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 191/419 (45%), Gaps = 5/419 (1%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           IF+ L   G  P  V Y  ++    + K FK    L+ EM E G+KPD++  + ++N + 
Sbjct: 79  IFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFS 138

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM-RKMGIDPSV 229
           E+    EA+ +F +M E  C    +T N +I  YG +   +++ +L   M R   + P+ 
Sbjct: 139 ESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNN 198

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
            +YN L+    + +   EA ++   M    ++ +VVTYNT+ + Y +  E  KA +++ +
Sbjct: 199 RTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVD 258

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M N+ + PN  T   I+  + + G L  A  +  ++R  G+  + V++ ++I  +  +G 
Sbjct: 259 MLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGD 318

Query: 350 VAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
                + L  + +    P+ I   T +   + AGR+++   +F     +G   DI VF  
Sbjct: 319 SDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSI 378

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + + F R  +      +   M   G  P+  I   +++ +    + E A  ++  M +  
Sbjct: 379 LAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMD 438

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
              + +    ++  YG  K     E + + ++  + + +     +V+  +     +NDA
Sbjct: 439 VSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDA 497



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 184/411 (44%), Gaps = 8/411 (1%)

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++N+  +    +EA+ +   + EQG +P TV+Y+ L+       +F     + +EM E  
Sbjct: 63  LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D    N +I+ + +    K+A  +F  M + G  P+  ++NTL++ YG      E++
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESM 182

Query: 250 HLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            L  LM R   ++ N  TYN ++    K    ++A N++ +M   G++P+ +TY+T+   
Sbjct: 183 KLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARA 242

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
           + + G+ ++A  +   + +  V  +      ++  Y   G +A A R+++ +R     PN
Sbjct: 243 YAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPN 302

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   + I      G  +          ++G   D+  F  ++  +S   +     E+F+
Sbjct: 303 LVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFD 362

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M  +G  PD H+ +++   + +  E   A+ L + M + G   +  +   ++S +    
Sbjct: 363 DMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAG 422

Query: 485 DFNMLESLFERL-DSDSNINKKELHHVVAGIYERAN--RLNDASRIMNRMN 532
                  +FE + D D + N K    ++ G  E     R  +  ++M  MN
Sbjct: 423 KMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMN 473



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ +L+ +       P+   YN+++  + + K  + A  +  +M   G+ PD  TY+TL 
Sbjct: 181 SMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLA 240

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + ++G  + A S +  M   +V+ +      ++    +  + ++A+ +  R++  GI 
Sbjct: 241 RAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIH 300

Query: 122 PDLVAYNTMINVF---GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           P+LV +N++I  F   G +    +A  ++EE    GVKPD +++ST++N +    +  + 
Sbjct: 301 PNLVIFNSLIKGFLDIGDSDGVDKALTMMEE---SGVKPDVITFSTIMNGWSSAGRMDKC 357

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +F +M +     D+   +I+   + +      A+ L   M K G+ P+VV + T++  
Sbjct: 358 QEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISG 417

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +  A    +A  +F  M   ++  N+ T+ T+I  YG++ +  +A  ++Q M+   + P 
Sbjct: 418 WCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPE 477

Query: 299 AITYSTIIAIWGKAGKLDRA 318
             T   +   W   G ++ A
Sbjct: 478 NSTLKLVSEAWRSIGMVNDA 497



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 5/223 (2%)

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V S   L+ +  E     EA  +F  +  +      VTY  ++    +    +  + L+
Sbjct: 56  TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLL 115

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM+  GI+P++I  + II  + ++G +  A  +FQK+  SG +     + T+I  Y  +
Sbjct: 116 SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGII 175

Query: 348 GLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
                + +LL  +      +PN       +  L +   I+EA  V  Q   +G   D+  
Sbjct: 176 RKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVT 235

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
           +  +   ++++ +      +   M +    P+     +++  Y
Sbjct: 236 YNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGY 278



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/165 (17%), Positives = 75/165 (45%), Gaps = 1/165 (0%)

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           R   + IL   G+ +EA ++F    + G       +  ++   +R K++  +  +  +M 
Sbjct: 60  RTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEME 119

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G  PDS ++  ++N++ +    + A +++ +M+E GC  +      ++  YG  +   
Sbjct: 120 ETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPE 179

Query: 488 MLESLFERLDSDSNINKKE-LHHVVAGIYERANRLNDASRIMNRM 531
               L E +   +N+      ++++ G   +   + +A  ++++M
Sbjct: 180 ESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQM 224


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 196/395 (49%), Gaps = 8/395 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           PS+  YNV++ +   A ++  A  LF  M R++ + PDR+TY+TLI+     G  + A  
Sbjct: 43  PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M    ++ ++  YS++I+   K +   ++  +   + ++G  PD+ A+N ++  F 
Sbjct: 103 LLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFA 162

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE--MNEVNCPLD 193
           ++   ++AR + + M E G KPD VSY  L++   +  K  E+L + +E  M       +
Sbjct: 163 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPN 222

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T + +I    +    + A  +F SM + G  P+  +Y TL+     AE   +A  LF 
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ-NRGIEPNAITYSTIIAIWGKA 312
            M +  I  + V YN++I  Y K    ++A  L +EM    G++P  +T++T+I  + K 
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPR 368
           GKL RA  L  ++ + G+  D   Y+ +I    R   +  A  +  ++R+     + +  
Sbjct: 343 GKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            + +  L + G I++A  VF     +G V +   F
Sbjct: 403 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 192/398 (48%), Gaps = 7/398 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +   +  E R  P  + YN ++  +  +   E A  L  EMR + IA + +TYS++
Sbjct: 63  KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    KE   + +   L++M     + D+  ++ +++   + ++  KA  ++  +  SG 
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY 182

Query: 121 VPDLVAYNTMINVFGK-AKLFKEARLLIE-EMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
            PD V+Y+ +I+   K  KL +  ++L E  MR  G  P+ +++STL++      +  +A
Sbjct: 183 KPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKA 242

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L VF  M E  C  +  T   +I    + +    A  LF  M +  I P  V+YN+L+  
Sbjct: 243 LEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 302

Query: 239 YGEAELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           Y +     EA  L+R M     ++  +VT+NT+I  + K  +  +A  L+ EM  +G+  
Sbjct: 303 YCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 362

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           +  TY  +IA   +A KLD A  +++++R     +DPV   + +    + G +  A  + 
Sbjct: 363 DTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 422

Query: 358 HELRQPNTIPRETAITILARA----GRIEEATWVFRQA 391
              R+   +P      IL+ +    GR+E+A  +   A
Sbjct: 423 EATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 211/450 (46%), Gaps = 18/450 (4%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           AY+ V++++ +A     A  +F+ M+     P   TY+ LI      G F  A+   Q M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 81  EQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           +++ RV  D   Y+ LI       +   A  + S ++   I  ++  Y+++I    K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            +E+  ++EEM   G  PD  +++ ++  +  ++   +A  V+  M E     D  + +I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 200 MIDVYGQLDMAKDADRLF--WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           +I    ++    ++ ++    +MR  G  P+V++++TL+          +A+ +F  M  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
              + N  TY T+I    ++ +  +A  L ++M    I P+A+ Y+++IA + K G +D 
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 318 AAMLFQKLRSSGVEIDP--VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           A  L++++ S G  + P  V + T+I  + ++G +  A  L+ E+       +T      
Sbjct: 312 AEKLYREM-SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370

Query: 372 ITILARAGRIEEATWVFRQ----AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           I  L+RA +++EA  V++Q     F    V  +S  G + +  + ++ YA    VFE  R
Sbjct: 371 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA----VFEATR 426

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +G  P+     ++  S  KL   E A  L
Sbjct: 427 KSGAVPNPETFRILSESLIKLGRVEDAQKL 456



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 192/437 (43%), Gaps = 46/437 (10%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV------FGKA- 137
           + GD   Y  +++   K    ++A+ +F  +KS   VP LV YN +IN       FGKA 
Sbjct: 8   IGGDA--YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 138 KLFKE-----------------------------ARLLIEEMREQGVKPDTVSYSTLLNL 168
            LF+                              AR L+ EMR++ +  +  +YS+++  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            V+  K  E+  V  EM    C  D+   N ++  + + +  + A  ++  M + G  P 
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE--QNVVTYNTMIKIYGKSLEHEKATNL 286
            VSY+ L+    +     E++ +   M  +      NV+T++T+I    ++ E EKA  +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              M   G +PN  TY+T+IA   +A K+ +A  LF+K+  + +  D V Y ++I  Y +
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 347 VGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
            G +  A++L  E+      QP  +   T I    + G++  A  +  +    G   D  
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I   SR  K    +EV+++MR   +  D       +    K    + A  ++   
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 425

Query: 462 QEEGCVFSDQVHFQMLS 478
           ++ G V + +  F++LS
Sbjct: 426 RKSGAVPNPET-FRILS 441



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 138/319 (43%), Gaps = 42/319 (13%)

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M++  C +     + ++    +  M   A  +F +M+     PS+V+YN L+     A  
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 245 FGEAIHLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           FG+A+ LF+ M+R K +E +  TYNT+I     S   E A  L+ EM+++ I  N  TYS
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 304 TIIAIWGKAGK-----------------------------------LDRAAMLFQKLRSS 328
           +II    K  K                                   +++A  ++Q +  S
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------PNTIPRETAITILARAGRIE 382
           G + D V Y  +I    ++G +  + ++L E+        PN I   T I  L R G +E
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  VF    +AG   +   +  +I    R +K     E+FEKM  A   PD+     ++
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 443 NSYGKLREFETADDLYSEM 461
             Y K    + A+ LY EM
Sbjct: 301 AGYCKRGSMDEAEKLYREM 319


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 224/494 (45%), Gaps = 38/494 (7%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           ++Y ++++ +  AK    A  LF  M++ G +P+   ++ LI+   K G    A      
Sbjct: 139 YSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 198

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M Q+ V   ++ Y+ +I    KL   + A+ I   ++ +G  PD   YNT+I      K 
Sbjct: 199 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT 258

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
            +EA  L+    ++G  P  V+++ L+N Y    KF +AL +  +M    C LDL     
Sbjct: 259 -EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 317

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I+   + D  K+A  L   +   G+ P+V++Y +++  Y ++     A+ + ++M+R  
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            + N  TYN+++    K  +  KA  L+ +MQ  GI PN ITY+T++         D A 
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 320 MLFQKLRSSGVEID--------------------------------PVLYQTMIVAYERV 347
            LF+ +  +G++ D                                 V Y T+I  + + 
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 497

Query: 348 GLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G    A    +R++ E   P++      +  L +  R+ EA  +  Q    G    I  +
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I+   R  K+ +   ++ +M S+G+ P +    + +NSY K    E A+DL  +M+ 
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617

Query: 464 EGCVFSDQVHFQML 477
           EG V  D V + +L
Sbjct: 618 EG-VAPDVVTYNIL 630



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 243/558 (43%), Gaps = 72/558 (12%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           AR + S   YN  LR++ R    E    ++ ++ Q G+ PD  TY+T+I  + KEG   +
Sbjct: 27  ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTT 86

Query: 73  AISWLQQMEQDRVSGD------LVL-YSNLIELARKL-------------SDYS------ 106
           A  + + + +  +  +      LVL Y    EL +               ++YS      
Sbjct: 87  AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ 146

Query: 107 ---------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
                    KA+ +F  +K  G  P++ A+  +I+   K+    +ARLL + M + GV P
Sbjct: 147 GLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVP 206

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM-AKDADRL 216
             ++Y+ ++  Y +  +  +AL +   M +  C  D  T N +I  YG  D   ++A+ L
Sbjct: 207 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGLCDQKTEEAEEL 264

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
             +  K G  P+VV++  L+  Y  AE F +A+ +   M   + + ++  +  +I    K
Sbjct: 265 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 324

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
               ++A  L+ E+   G+ PN ITY++II  + K+GK+D A  + + +   G + +   
Sbjct: 325 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 384

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           Y +++    +   +  A  LL ++++   IP     T L + G+ +E        FD   
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ-GQCDE------HDFD--- 434

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                                N   +FE M   G  PD H  A++ ++  K    E A  
Sbjct: 435 ---------------------NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA-- 471

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
            YS +  +G   +   +  ++  +    + +   +L ER+  +        + V+     
Sbjct: 472 -YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 530

Query: 517 RANRLNDASRIMNRMNKR 534
           +  RLN+A  I+++M+ R
Sbjct: 531 KQKRLNEALPILDQMSLR 548



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 205/469 (43%), Gaps = 33/469 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + YN ++  +++ K+   A  L  +M++ GI P+  TY+TL+     E  FD+A   
Sbjct: 380 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            + MEQ+ +  D   Y+ L +   K     +A S   R    G+    V Y T+I+ F K
Sbjct: 440 FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSK 496

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A     A  LIE M ++G  PD+ +YS LL+   +  +  EAL +  +M+       +  
Sbjct: 497 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 556

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             I+ID     G+ D AK   R++  M   G  PS  +Y   +  Y +     +A  L  
Sbjct: 557 YTILIDEMLREGKHDHAK---RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+R+ +  +VVTYN +I   G     ++A + ++ M     EPN  TY  ++    K G
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-G 672

Query: 314 KLDRAAMLFQKLRSSG----VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            L       + + +SG    +E+D + +Q +             +R++     P      
Sbjct: 673 NL----AYVRSVDTSGMWNLIELD-ITWQLL-------------ERMVKHGLNPTVTTYS 714

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I    +AGR+EEA  +       G   +  ++  +I+     K +   +     M   
Sbjct: 715 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 774

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           G+ P      L++       +FE    L+ ++ E G    D+V +++L+
Sbjct: 775 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEVAWKILN 822



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 15/400 (3%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
           N  + A  +   + AI    R  S+ +      YN  +    +  + +    +  ++ + 
Sbjct: 3   NCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQD 62

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           G+ PDTV+Y+T++  Y +      A   F  + E     +  TCN ++  Y +    + A
Sbjct: 63  GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
             LF  M  MG   +  SY  L++   +A+   +A+ LF +M+R     NV  +  +I  
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             KS     A  L   M   G+ P+ +TY+ +I  + K G+++ A  + + +  +G   D
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242

Query: 334 PVLYQTMIVAYERVGLVAH----AKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT 385
              Y T+I      GL       A+ LL+   +    P     T L      A + ++A 
Sbjct: 243 DWTYNTLI-----YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +  +   +    D+ VFG +I    +  +     E+  ++ + G  P+      +++ Y
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
            K  + + A ++   M+ +GC  +   +  +  +YG  KD
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSL--MYGLVKD 395



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 21/336 (6%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + Y+V+L  + + K+   A  + D+M  RGI    + Y+ LI    +EG  D A  
Sbjct: 516 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 575

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M           Y+  I    K      A  +  +++  G+ PD+V YN +I+  G
Sbjct: 576 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 635

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  A   ++ M     +P+  +Y  LL +L   N  +V ++      N +   LD+
Sbjct: 636 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE--LDI 693

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           T                   +L   M K G++P+V +Y++L+  + +A    EA  L   
Sbjct: 694 TW------------------QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH 735

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  N   Y  +IK    +   EKA + +  M   G +P   +Y  ++      G 
Sbjct: 736 MCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 795

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            ++   LF  L   G   D V ++ +     + G V
Sbjct: 796 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 831



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS   Y V + +  +  + E A  L  +M + G+APD  TY+ LI   G  G  D A 
Sbjct: 585 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAI---------------SIFSRLKSS 118
           S L++M       +   Y  L++ L +    Y +++                +  R+   
Sbjct: 645 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 704

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G+ P +  Y+++I  F KA   +EA LL++ M  +G+ P+   Y+ L+    +   F +A
Sbjct: 705 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 764

Query: 179 LSVFAEMNEVN 189
           LS  + M+E  
Sbjct: 765 LSFVSIMSECG 775


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 203/451 (45%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P        ++      Q   A    D++   G   D+ +Y TLI    K G   +A+
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L++ +   V  D+V+Y+ +I+   K    + A  ++S   S  I PD+  YN +I+ F
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 K+A  L  +M  + + PD  ++S L++ + ++    EA +V A M + +   D+
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  ++    A+ +F +M   G+  +V SYN ++  + + ++  EA+ LF+ 
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K+I  +V+TY+++I    KS     A  L+ EM  RG +P+ ITY++I+    K   
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D+A  L  KL+  G+  D   Y  ++                                 
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKG------------------------------- 587

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L ++G++E+A  VF      G   D+  +  MI+ F     +   + +  KM   G  PD
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +    +++ S  +  E + A+ L  EM   G
Sbjct: 648 AKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 168/358 (46%), Gaps = 35/358 (9%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           N+     P V  YN ++  + + K    A  L+ E   + I PD +TY+ LI+ F   G 
Sbjct: 324 NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK 383

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
              AI    +M                                    S  I+PD+  ++ 
Sbjct: 384 LKDAIDLFNKMT-----------------------------------SKNIIPDVYTFSI 408

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++ F K    KEA+ ++  M +Q +KPD V+YS+L++ Y   ++  +A S+F  M+   
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ + NIMI+ + ++ M  +A +LF  M    I P V++Y++L+    ++     A+
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M  +  + +++TYN+++    K    +KA  L+ +++ +GI P+  TY+ ++   
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            ++GKL+ A  +F+ L   G  +D   Y  MI  +   GL   A  LL ++ +   IP
Sbjct: 589 CQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 646



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 159/317 (50%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P VF YN ++       + + A  LF++M  + I PD YT+S L+  F K+G    A
Sbjct: 363 RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEA 422

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M +  +  D+V YS+L++    +++ +KA SIF+ +   G+  ++ +YN MIN 
Sbjct: 423 KNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMING 482

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F K K+  EA  L +EM  + + PD ++YS+L++   ++ +   AL +  EM+      D
Sbjct: 483 FCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N ++D   +      A  L   ++  GI P + +Y  L++   ++    +A  +F 
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K    +V  Y  MI+ +      ++A  L+ +M+  G  P+A TY  II    +  
Sbjct: 603 DLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662

Query: 314 KLDRAAMLFQKLRSSGV 330
           + D A  L +++   G+
Sbjct: 663 ENDMAEKLLREMIMRGL 679



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 206/458 (44%), Gaps = 41/458 (8%)

Query: 44  EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
           ++ + G  PD  T +T I  F  +G    A+ +  ++       D V Y  LI    K+ 
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           +   A+ +  R     + PD+V YNT+I+   K K   +A  L  E   + + PD  +Y+
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            L++ +                                 + G+L   KDA  LF  M   
Sbjct: 373 ALISGFC--------------------------------IVGKL---KDAIDLFNKMTSK 397

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
            I P V +++ L+  + +     EA ++  +M ++ I+ +VVTY++++  Y    E  KA
Sbjct: 398 NIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKA 457

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            ++   M +RG+  N  +Y+ +I  + K   +D A  LF+++    +  D + Y ++I  
Sbjct: 458 ESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDG 517

Query: 344 YERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
             + G +++A  L+ E+    +QP+ I   + +  L +   +++A  +  +    G   D
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           ++ +  +++   ++ K  +  +VFE +   GY  D +   +++  +     F+ A  L S
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFN-MLESLFERL 496
           +M+E GC+  D   ++++ L    KD N M E L   +
Sbjct: 638 KMEENGCI-PDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 192/436 (44%), Gaps = 30/436 (6%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+S+F RL      P  + +  ++    K+K +     L ++M  +G+K + ++ + L+N
Sbjct: 94  AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILIN 153

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            + +      A SV            +    I+ D + + ++ +D  RL W      I  
Sbjct: 154 SFCQLGLIPFAFSVLTR--------GVYWIEILKDCFDRKNL-EDFKRLCW------IVL 198

Query: 228 SVVSYNTL-LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
            +  +  L L+ + ++ LF   +H F+++   E  +  +    ++K +  S+E+      
Sbjct: 199 ILWDFKRLFLKDFLQSRLF-NVLHSFKILI--EYHKTFIKQKCLLKSFEISIEYTPP--- 252

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             ++   G EP+ IT +T I  +   G++ +A     K+ + G  +D V Y T+I    +
Sbjct: 253 --KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCK 310

Query: 347 VGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
           VG    A  LL     +L QP+ +   T I  + +   + +A  ++ +        D+  
Sbjct: 311 VGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFT 370

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I  F    K  + I++F KM S    PD +  +++++ + K    + A ++ + M 
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM 430

Query: 463 EEGCVFSDQVHF-QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
           ++  +  D V +  ++  Y    + N  ES+F  +         + ++++   + +   +
Sbjct: 431 KQS-IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489

Query: 522 NDASRIMNRMNKRRTF 537
           ++A ++   M+ ++ F
Sbjct: 490 DEAMKLFKEMHHKQIF 505


>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
          Length = 607

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 227/490 (46%), Gaps = 76/490 (15%)

Query: 40  GLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDSAISWLQQMEQDRVSGDLVLYSNLIEL 98
           G+ + M+  G+ P   +Y+ +I   GK G+     + + +QM +D +  D   +++L+  
Sbjct: 2   GVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAA 61

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             ++     A ++F  +   GI  D+  YNT I+   K    + A  ++ +M  +GVKP+
Sbjct: 62  CSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPN 121

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
            V+YSTL                                   ID Y +L+  ++A +L  
Sbjct: 122 VVTYSTL-----------------------------------IDGYSKLEKYEEALKLCE 146

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M+ M I    V YNTLL +Y +A  + E  ++   M+   IE++ VTYN++I  YGK  
Sbjct: 147 KMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQG 206

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             +  + L+Q+M+ RG+ P+ +TYST+I I+ KAG    A  ++   + SG++ D VL+ 
Sbjct: 207 RLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFS 266

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           + I    + GL+  A  LL+++ +    PN +     I    ++  + E         D 
Sbjct: 267 SFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMME---------DD 317

Query: 395 GEVKDISVFGC-------MIELFSRNKKYAN------------VIEVFEKMRSAGYFPDS 435
            EV D+ + G        +    SR  + A             ++E+F+KM   G  P+ 
Sbjct: 318 SEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNV 377

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY-GARKDFNMLESLFE 494
              + +LN+  +   FE A  L  +++    +F + V+     L  G+R+ ++  +SLF 
Sbjct: 378 VTFSAILNACSRCNSFEDAALLLEQLR----LFDNFVYGVAYGLLVGSREVWSQAQSLFN 433

Query: 495 ---RLDSDSN 501
              R+DS ++
Sbjct: 434 QLGRMDSPTS 443



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 163/301 (54%), Gaps = 1/301 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           A   P+  +YN V+    +         G F +M + G+ PDR T+++L+    + G  +
Sbjct: 10  AGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLE 69

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A +   +M    +  D+  Y+  I+   K  +   A+ +   +++ G+ P++V Y+T+I
Sbjct: 70  DARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLI 129

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + + K + ++EA  L E+M+   ++ D V Y+TLL +YV+  K+ E  +V  EM E+   
Sbjct: 130 DGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIE 189

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T N +I+ YG+         L   MRK G+ PSV++Y+TL+ +Y +A + G+A ++
Sbjct: 190 KDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNV 249

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           +   +   ++ +VV +++ I    K+   E A +L+ +M   GI+PN +TY+ II  +GK
Sbjct: 250 YLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGK 309

Query: 312 A 312
           +
Sbjct: 310 S 310



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 162/331 (48%), Gaps = 36/331 (10%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ YN  +  + +    ELA  +  +M  +G+ P+  TYSTLI  + K   ++ A+   +
Sbjct: 87  IYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCE 146

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+  R+  D V Y+ L+ +  K   Y++  ++   ++  GI  D V YN++IN +GK  
Sbjct: 147 KMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQG 206

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
                 +L+++MR++GV P  ++YSTL+++Y +     +A +V+ +  E     D+   +
Sbjct: 207 RLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFS 266

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             ID   +  + + A  L   M +MGI P+VV+YN ++  +G++++  E           
Sbjct: 267 SFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMME----------- 315

Query: 259 EIEQNVVTYNTMIKIYGK---------SLEHEKATN--------------LMQEMQNRGI 295
             + + V    ++ +YG          S     AT+              L Q+M  +G+
Sbjct: 316 --DDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGV 373

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
            PN +T+S I+    +    + AA+L ++LR
Sbjct: 374 RPNVVTFSAILNACSRCNSFEDAALLLEQLR 404



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 143/298 (47%), Gaps = 28/298 (9%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN +L   ++A ++     + DEM + GI  D  TY++LI  +GK+G  D     +Q M
Sbjct: 159 CYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDM 218

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            +  V+  ++ YS LI++  K   +  A +++   K SG+ PD+V +++ I+   K  L 
Sbjct: 219 RKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLI 278

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           + A  L+ +M E G+KP+ V+Y+ +++ + ++   +E  S   +M              +
Sbjct: 279 EWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMG-------------I 325

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           + VYG   + + A+ +    R            T +R+    ELF   + LF+ M ++ +
Sbjct: 326 VGVYGG-QIVRVANPVSRGGRSA----------TDVRMRRSQELF-FILELFQKMVQQGV 373

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA---IWGKAGKL 315
             NVVT++ ++    +    E A  L+++++        + Y  ++    +W +A  L
Sbjct: 374 RPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLVGSREVWSQAQSL 431



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 13/298 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE         YN ++    +  + ++   L  +MR+RG+AP   TYSTLI  + K GM 
Sbjct: 184 EELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMH 243

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +     ++  +  D+VL+S+ I+   K      A+S+ + +   GI P++V YN +
Sbjct: 244 GDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAI 303

Query: 131 INVFGKAKLFKEARLLIEEMREQGV---------KPDTVSYSTLLNLYV-ENHKFVEALS 180
           I+ FGK+K+  E    + +M   GV          P +    +  ++ +  + +    L 
Sbjct: 304 IDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILE 363

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M +     ++ T + +++   + +  +DA  L   +R        V+Y  L+   G
Sbjct: 364 LFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLV---G 420

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             E++ +A  LF  + R +   +   YN +  +     +  KA  ++ E  NR +  N
Sbjct: 421 SREVWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWEN 478


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 222/463 (47%), Gaps = 11/463 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+R  PS+  +  +L  + + K++++   L D ++  G++ D YT + L+ CF +     
Sbjct: 65  ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S+L +M +     D+V +++LI      +   +A+S+ +++   GI PD+V Y T+I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L ++M   G++PD V Y++L+N    + ++ +A S+   M +    
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+ T N +ID + +     DA+ L+  M +M I P++ +Y +L+  +       EA  +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F LM+ K    +VV Y ++I  + K  + + A  +  EM  +G+  N ITY+T+I  +G+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-------PN 364
            GK + A  +F  + S GV  +   Y  ++      G V  A  +  ++++       PN
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
                  +  L   G++E+A  VF           I  +  +I+   +  K  N + +F 
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREF--ETADDLYSEMQEEG 465
            + S G  P+  ++       G  RE     A  L+ +M+E+G
Sbjct: 485 SLPSKGVKPN--VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 9/414 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  +LRN L + Q+  A  LF  M +    P    ++ L+    K   FD  I+    ++
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              VS DL   + L+    + S    A S   ++   G  PD+V + ++IN F      +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  ++ +M E G+KPD V Y+T+++   +N     ALS+F +M       D+     ++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +        +DAD L   M K  I P V+++N L+  + +   F +A  L+  M R  I 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N+ TY ++I  +      ++A  +   M+ +G  P+ + Y+++I  + K  K+D A  +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
           F ++   G+  + + Y T+I  + +VG    A+ +   +      PN       +  L  
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 378 AGRIEEATWVF----RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
            G++++A  +F    ++  D G   +I  +  ++     N K    + VFE MR
Sbjct: 400 NGKVKKALMIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 164/357 (45%), Gaps = 38/357 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P V  Y  ++ ++ +      A  LFD+M   GI PD   Y++L+      G + 
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A S L+ M + ++  D++ ++ LI+   K   +  A  +++ +    I P++  Y ++I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F       EAR +   M  +G  PD V+Y++L+N + +  K  +A+ +F EM++    
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T   +I  +GQ+     A  +F  M   G+ P++ +YN LL          +A+ +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409

Query: 252 FRLMQRKEIE---QNVVTYNTMIK--IYGKSLEH-------------------------- 280
           F  MQ++E++    N+ TYN ++    Y   LE                           
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469

Query: 281 -------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
                  + A NL   + ++G++PN +TY+T+I+   + G    A +LF+K++  GV
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 151/330 (45%), Gaps = 4/330 (1%)

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           F EA  L   M E    P  + ++ LLN+  +  KF   +++   +  +    DL TCN+
Sbjct: 53  FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +++ + Q      A      M K+G +P +V++ +L+  +       EA+ +   M    
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I+ +VV Y T+I    K+     A +L  +M+N GI P+ + Y++++     +G+   A 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            L + +    ++ D + +  +I A+ + G    A+ L +E+ +    PN     + I   
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
              G ++EA  +F      G   D+  +  +I  F + KK  + +++F +M   G   ++
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
                ++  +G++ +   A +++S M   G
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/222 (19%), Positives = 89/222 (40%), Gaps = 4/222 (1%)

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G+A+   RL+      +    Y  +++    SL+  +A +L   M      P+ I ++ +
Sbjct: 19  GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---- 361
           + +  K  K D    L   L+  GV  D      ++  + +      A   L ++     
Sbjct: 79  LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +P+ +   + I       R+EEA  +  Q  + G   D+ ++  +I+   +N      + 
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           +F++M + G  PD  +   ++N       +  AD L   M +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 217/490 (44%), Gaps = 40/490 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS   Y  ++R +  A  ++L   L  EMR+ G         + I  + +  +FD A  
Sbjct: 87  TPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFD 146

Query: 76  WL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +  Q++   V  +  +Y++L+ +  + S      S ++ + S GI PD+V +NT+I+  
Sbjct: 147 LVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDAL 206

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +A+  + A L++EEM    V PD  +++TL+  +VE      AL + A M+E+ C    
Sbjct: 207 CRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266

Query: 195 TTCNIMIDVYGQLDMAKDA--------------DRLFWS--------------------- 219
            T N++I+ Y +L    DA              DR+ +S                     
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M + G +P V +Y+T++          EA  +   M       +  T+NT+I       +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            E+A +L +E+  +G+ PN  T++ +I    K G    A  LF++++SSG   D V Y  
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           +I      G +A A  LL E+       +T+   T I  L +  RIEEA  VF Q    G
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
             ++   F  +I+     ++  +  E+ ++M S G  P++     +L  Y K      A 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566

Query: 456 DLYSEMQEEG 465
           D+   M   G
Sbjct: 567 DILQTMTANG 576



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 222/507 (43%), Gaps = 51/507 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS---- 72
           P V  +N V+  + RA+Q   A  + +EM    +APD  T++TL+  F +EG  ++    
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253

Query: 73  -------------------------------AISWLQQMEQDRVSGDLVLYSNLIELARK 101
                                          A+ ++QQ   D    D V +S  +    +
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                 A+ +   +   G  PD+  Y+T+IN        +EA+ ++ +M + G  PDT +
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++TL+      ++  EAL +  E+       ++ T NI+I+   ++     A RLF  M+
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P  V+YN L+     +    +A+ L + M+     Q+ VTYNT+I    K    E
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIE 493

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +  +M   GI  NAIT++T+I     A ++D AA L  ++ S G++ + V Y +++
Sbjct: 494 EAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553

Query: 342 VAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G ++ A  +L  +     + + +   T I  L +A R + A  + R     G  
Sbjct: 554 THYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMK 613

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY----GKLREFET 453
                +  +I+   R     + + +F +M   G  PD+    +V        G ++E   
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKE--- 670

Query: 454 ADDLYSEMQEEGCV--FSDQVHFQMLS 478
           A D   EM + G +  FS    F+ML+
Sbjct: 671 AFDFLVEMADNGFIPEFS---SFRMLA 694



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 7/405 (1%)

Query: 6   LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L +I +E    + P    ++  +  + +    + A  +   M Q G  PD YTYST+I C
Sbjct: 286 LGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINC 345

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
               G  + A   + QM       D   ++ LI      +   +A+ +   L   G+ P+
Sbjct: 346 LCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPN 405

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +  +N +IN   K      A  L EEM+  G  PD V+Y+ L++    + K  +AL +  
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM    CP    T N +ID   +    ++A+ +F  M   GI  + +++NTL+     AE
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAE 525

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
              +A  L   M  + ++ N VTYN+++  Y K     KA +++Q M   G E + +TY+
Sbjct: 526 RIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYA 585

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
           T+I    KA +   A  L + +R  G++  P  Y  +I +  R      A  L  E+ + 
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV 645

Query: 364 NTIPRETAITILAR-----AGRIEEATWVFRQAFDAGEVKDISVF 403
              P      I+ R      G I+EA     +  D G + + S F
Sbjct: 646 GGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSF 690



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 4/448 (0%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN +L  +    + +L    + EM  +GI PD  T++T+I    +     +A+  L++M 
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              V+ D   ++ L+E   +      A+ + +R+   G  P  V  N +IN + K     
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A   I++    G +PD V++ST +N   +N     AL V   M +  C  D+ T + +I
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           +        ++A  +   M   G  P   ++NTL+          EA+ L R +  K + 
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            NV T+N +I    K  +   A  L +EM++ G  P+ +TY+ +I     +GKL +A  L
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILAR 377
            +++  SG     V Y T+I    +   +  A+ +  ++       N I   T I  L  
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
           A RI++A  +  Q    G   +   +  ++  + +    +   ++ + M + G+  D   
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
            A ++N   K R  + A  L   M+ +G
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKG 611



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 209/488 (42%), Gaps = 34/488 (6%)

Query: 46  RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDY 105
           R  G+ P R  Y  +I   G  G FD     + +M ++     L L  + I    +L  +
Sbjct: 82  RDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLF 141

Query: 106 SKAISIFS-RLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             A  + S +L   G+  +   YN ++ V  +    K       EM  QG++PD V+++T
Sbjct: 142 DDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNT 201

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++      +   A+ +  EM+  +   D TT   +++ + +    + A RL   M +MG
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P+ V+ N L+  Y +    G+A+   +       E + VT++T +    ++   + A 
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++  M   G EP+  TYST+I      G+L+ A  +  ++  SG   D   + T+IVA 
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA- 380

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
                                         L    ++EEA  + R+    G   ++  F 
Sbjct: 381 ------------------------------LCTENQLEEALDLARELTVKGLSPNVYTFN 410

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I    +       + +FE+M+S+G  PD     +++++     +   A DL  EM+  
Sbjct: 411 ILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLD-SDSNINKKELHHVVAGIYERANRLND 523
           GC  S   +  ++     R+     E +F+++D +    N    + ++ G+   A R++D
Sbjct: 471 GCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC-NAERIDD 529

Query: 524 ASRIMNRM 531
           A+ ++++M
Sbjct: 530 AAELVDQM 537


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/527 (21%), Positives = 243/527 (46%), Gaps = 14/527 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P++   N ++  +    +   A  L D M + G  P+  TY  ++    K G   
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L++ME+ ++  D V YS +I+   K      A ++F+ ++  G   D++ Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             F  A  + +   L+ +M ++ + PD V++S L++ +V+  K  EA  +  EM +    
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T   +ID + + +    A+ +   M   G  P++ ++N L+  Y +A L  + + L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           FR M  + +  + VTYNT+I+ + +  + E A  L QEM +R + P+ ++Y  ++     
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            G+ ++A  +F+K+  S +E+D  +Y  +I        V  A  L   L     +P+   
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G + EA  +FR+  + G   +   +  +I             ++ E+++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYS--------EMQEEGCVFSDQVHFQMLSL 479
             G+  D+  +   L++  ++ +     D+++         ++E   V+     F+ +  
Sbjct: 590 RCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKA 649

Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
            G + +     ++ + L + + I+  ++  V+  ++ER  + N  ++
Sbjct: 650 MGYKPNVVTYNTVIKGLLNGNMIS--QVPGVLDQMFERGCQPNAVTK 694



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 216/492 (43%), Gaps = 39/492 (7%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           +R  P +  ++ +   V R KQ++L   L  +M  +GIA + YT S +I C  +      
Sbjct: 66  SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S + ++ +     D V +S LI         S+A+ +  R+   G  P L+  N ++N
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                    +A LLI+ M E G +P+ V+Y  +L +  ++ +   A+ +  +M E    L
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D    +I+ID   +     +A  LF  M   G    ++ Y TL+R +  A  + +   L 
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M +++I  +VV ++ +I  + K  +  +A  L +EM  RGI P+ +TY+++I  + K 
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 313 GKLDRAAM-----------------------------------LFQKLRSSGVEIDPVLY 337
            +LD+A                                     LF+K+   GV  D V Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425

Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            T+I  +  +G +  AK L  E+     +P+ +  +  +  L   G  E+A  +F +   
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           +    DI ++  +I       K  +  ++F  +   G  PD     +++    K      
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 454 ADDLYSEMQEEG 465
           AD L+ +M+E+G
Sbjct: 546 ADLLFRKMEEDG 557



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 207/461 (44%), Gaps = 17/461 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE +       Y++++  + +    + A  LF+EM  +G   D   Y+TLI  F   G +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L+ M + +++ D+V +S LI+   K     +A  +   +   GI PD V Y ++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K     +A  +++ M  +G  P+  +++ L+N Y + +   + L +F +M+    
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
             D  T N +I  + +L   + A  LF  M    + P +VSY  LL      GE E   +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE---K 475

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F  +++ ++E ++  YN +I     + + + A +L   +  +G++P+  TY+ +I 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              K G L  A +LF+K+   G   +   Y  +I A+   G    + +L+ E+++     
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR----- 590

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS--RNKKYANVIEVFEK 425
                ++ A   R   +T    +   AG   D+  F  ++  F    N    +   +F+ 
Sbjct: 591 --CGFSVDASTLRFALSTLA--RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKN 646

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           M++ GY P+      V+              +  +M E GC
Sbjct: 647 MKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGC 687



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 183/395 (46%), Gaps = 4/395 (1%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q+M + R    L+ +S L  +  +   Y   + +  +++  GI  +L   + M
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   + +    A   + ++ + G +PDTV++STL+N      +  EAL +   M E+  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              L T N +++         DA  L   M + G  P+ V+Y  +L+V  ++     A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L R M+ ++I+ + V Y+ +I    K    + A NL  EM+ +G + + I Y+T+I  + 
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
            AG+ D  A L + +    +  D V +  +I  + + G +  A+ L  E+ Q    P+T+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              + I    +  ++++A  +       G   +I  F  +I  + +     + +E+F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
              G   D+     ++  + +L + E A +L+ EM
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 176/412 (42%), Gaps = 63/412 (15%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + +P V A++ ++   ++  +   A  L  EM QRGI+PD  TY++LI  F KE   D A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              L  M       ++  ++ LI    K +     + +F ++   G+V D V YNT+I  
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F +    + A+ L +EM  + V+PD VSY  LL+   +N +  +AL +F ++ +    LD
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 194 LTTCNIMI-------------DVYGQLDMA----------------------KDADRLFW 218
           +   NI+I             D++  L +                        +AD LF 
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 219 SMRKMGIDPSVVSYNTLLRVY-GE------AELFGE---------------AIHLFRLMQ 256
            M + G  P+  +YN L+R + GE      A+L  E               A+     M 
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARML 611

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHE----KATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           +   E +V T+ T+++ +   LE       A  L + M+  G +PN +TY+T+I      
Sbjct: 612 KAGHEPDVFTFTTLLRPF--CLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
             + +   +  ++   G + + V   T I    +  L   A  LL ++   N
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 24/341 (7%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P++  +N+++    +A   +    LF +M  RG+  D  TY+TLI  F + G  + A  
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q+M   RV  D+V Y  L++      +  KA+ IF +++ S +  D+  YN +I+   
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A    +A  L   +  +GVKPD  +Y+ ++    +     EA  +F +M E     +  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 196 TCNIMIDVY-GQLDMAK---------------DADRLFWS------MRKMGIDPSVVSYN 233
           T NI+I  + G+ D  K               DA  L ++      M K G +P V ++ 
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFT 623

Query: 234 TLLRVYG--EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           TLLR +   E     +A  LF+ M+    + NVVTYNT+IK         +   ++ +M 
Sbjct: 624 TLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMF 683

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            RG +PNA+T ST I+   K      A +L +K+ +   ++
Sbjct: 684 ERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNEDV 724



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 24/272 (8%)

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           ++ + A +L QEM      P  I +S + ++  +  + D    L +++   G+  +    
Sbjct: 51  IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110

Query: 338 QTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
             MI    R   ++ A     +++    +P+T+   T I  L   GR+ EA  +  +  +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G    +     ++     N K ++ + + ++M   G+ P+      VL    K  +   
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVA 512
           A +L  +M+E   +  D V + ++ + G  KD +        LD+  N+ N+ E+    A
Sbjct: 231 AMELLRKMEERK-IKLDAVKYSII-IDGLCKDGS--------LDNAFNLFNEMEIKGFKA 280

Query: 513 GI---------YERANRLNDASRIMNRMNKRR 535
            I         +  A R +D ++++  M KR+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 227/512 (44%), Gaps = 43/512 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  + EEA   P   AY V++    R  + + A  L DEM + G+  + +  ++LI  +
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    A   + +M    +  D   Y+ L++   +    S+A ++  ++   GI P +
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT++    +   F +A  +   M ++GV PD V YSTLL+   +   F  A +++ +
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +          T N MI    ++    +A+ +F  M+ +G  P  ++Y TL+  Y +A  
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            G+A  +   M+R+ I  ++  YN++I    KS    + T+L+ EM  RG+ PN +TY  
Sbjct: 558 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGA 617

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I  W K G LD+A   + ++  +G+  + ++  TM+    R+G +  A  L+ ++    
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677

Query: 363 ----------------------------------PNTIPRETAITILARAGRIEEATWVF 388
                                             PN I    AI  L + G++++A   F
Sbjct: 678 FFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF---EKMRSAGYFPDSHIIALVLNSY 445
                 G V D   +  +I  +S      NV E F   ++M   G  P+      ++N  
Sbjct: 738 SMLSLKGFVPDNFTYCTLIHGYS---AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            K    + A  L+ ++ ++G +F + V +  L
Sbjct: 795 CKSENVDRAQRLFHKLHQKG-LFPNVVTYNTL 825



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 213/455 (46%), Gaps = 7/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N +L N+++  +   AH ++ +M + GI PD +  S ++  F K+G  D A  +
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   V  ++V Y +LI     L D   A  +   +   G+  ++V Y  +I  + K
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EA  ++  M+E+  + PD  +Y  L++ Y    K  +A+ +  EM  +    +L 
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN +I+ Y +     +A+ +   M    + P   SYNTLL  Y       EA +L   M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ IE  V+TYNT++K   +    + A  +   M  RG+ P+ + YST++    K    
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 488

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           + A+ L++ + + G     + + TMI    ++G +  A+ +  +++     P+ I   T 
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I    +A  + +A  V + A +   +   I ++  +I    ++++   V ++  +M   G
Sbjct: 549 IDGYCKASNVGQAFKV-KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             P+      +++ + K    + A   Y EM E G
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 212/484 (43%), Gaps = 36/484 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F  N ++    +  +   A G+   M    + PD Y+Y+TL+  + +EG    A +  
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M Q+ +   ++ Y+ L++   ++  +  A+ I+  +   G+ PD V Y+T+++   K 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 485

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           + F+ A  L +++  +G     ++++T+++   +  K VEA  +F +M ++ C  D  T 
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +ID Y +      A ++  +M +  I PS+  YN+L+    ++    E   L   M  
Sbjct: 546 RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 605

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  N+VTY  +I  + K    +KA +   EM   G+  N I  ST+++   + G++D 
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 318 AAMLFQKLRSSGVEIDP--------------------------------VLYQTMIVAYE 345
           A +L QK+   G   D                                 ++Y   I    
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 346 RVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G V  A+R    L     +P      T I   + AG ++EA  +  +    G V +I 
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I    +++       +F K+   G FP+      +++ Y K+   + A  L  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 462 QEEG 465
            EEG
Sbjct: 846 IEEG 849



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 13/343 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SPS+  YN ++  + ++++      L  EM  RG+ P+  TY  LI  + KEGM 
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S   +M ++ +S ++++ S ++    +L    +A  +  ++   G  PD       
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH------ 682

Query: 131 INVFGKAKLFKEARLLIEEMREQGVK----PDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
              F K+ +   A   I +  ++  K    P+ + Y+  +    +  K  +A   F+ ++
Sbjct: 683 -ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 187 -EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +   P + T C  +I  Y       +A RL   M + G+ P++V+YN L+    ++E  
Sbjct: 742 LKGFVPDNFTYCT-LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A  LF  + +K +  NVVTYNT+I  Y K    + A  L  +M   GI P+ +TYS +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           I    K G ++R+  L  ++  +GV+   + Y T++  Y R G
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 173/386 (44%), Gaps = 33/386 (8%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W +  AR ++ S   +N ++  + +  +   A  +FD+M+  G +PD  TY TLI  + K
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
                 A      ME++ +S  + +Y++LI    K     +   + + +   G+ P++V 
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL------------NLYVE--- 171
           Y  +I+ + K  +  +A     EM E G+  + +  ST++            NL ++   
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 172 NHKFVE-------------ALSVFAEMNEVNCPLDLTTCNIM--IDVYGQLDMAK--DAD 214
           +H F               A+   A+  + +C   L   NI+  I + G     K  DA 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           R F  +   G  P   +Y TL+  Y  A    EA  L   M R+ +  N+VTYN +I   
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS   ++A  L  ++  +G+ PN +TY+T+I  + K G +D A  L  K+   G+    
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHEL 360
           V Y  +I    + G +  + +LL+++
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQM 880



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/449 (21%), Positives = 201/449 (44%), Gaps = 24/449 (5%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           + VLRN+       L  G F  + +Q+   P+  +Y  L+    +  M+D   ++L Q+ 
Sbjct: 72  DAVLRNLRLNPTASL--GFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV 129

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                 DL  + +     R    + + + ++     S  V D++     + V+ +  L K
Sbjct: 130 ------DLCKFKD-----RGNVIWDELVGVYREFAFSPTVFDMI-----LKVYVEKGLTK 173

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  + + M + G  P   S ++LLN  V+N +   A  V+ +M  V    D+   +IM+
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + + +     +A      M  +G++P++V+Y++L+  Y        A  + + M  K + 
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAM 320
           +NVVTY  +IK Y K  + ++A  +++ MQ    + P+   Y  +I  + + GK+D A  
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILA 376
           L  ++   G++ +  +  ++I  Y + G +  A+ ++  +     +P++    T +    
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G   EA  +  +    G    +  +  +++   R   + + ++++  M   G  PD  
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
             + +L+   K+  FE A  L+ ++   G
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARG 502



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 78/146 (53%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN ++  + +++  + A  LF ++ Q+G+ P+  TY+TLI  + K G  D+A   
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M ++ +S  +V YS LI    K  D  +++ + +++  +G+   L+ Y T++  + +
Sbjct: 842 KDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIR 901

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSY 162
           +   ++   L + M  + +    +S+
Sbjct: 902 SGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 650

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 191/391 (48%), Gaps = 35/391 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +FAYN++L  + +    E A  +F++M++R    D Y+Y+ +I   G+ G +D A+    
Sbjct: 238 IFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFN 294

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD----------LVA-- 126
           +M  + ++ ++V Y+ L+++  K     KAI +FSR+  +G  P+          LVA  
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEG 354

Query: 127 --------------------YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
                               Y+ ++    K     EA  L  +M    VK +  SY ++L
Sbjct: 355 QLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                  K +EA+ + ++++E     D    N +    G+L        LF  M+K G  
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P + +YN L+  +G      EAI++F  ++R + + ++++YN++I   GK+ + ++A   
Sbjct: 475 PDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            +EMQ +G+ P+ +TYST++  +GK  +++ A  LF+++   G + + V Y  ++   E+
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            G  A A  L  +++Q    P     T+L R
Sbjct: 595 SGRTAEAVDLYTKMKQQGLTPDSITYTVLER 625



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 207/439 (47%), Gaps = 16/439 (3%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F Y  +L+  LR++    A  ++ E+R+ G   D + Y+ L+    K+   + A    + 
Sbjct: 204 FTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFED 260

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M++     D   Y+ +I    ++  Y +A+ +F+ + + G+  ++V YNT++ V  K K+
Sbjct: 261 MKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A  +   M E G +P+  +YS +LNL V   + V  L    E+++      + +   
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVR-LDGIVEISKRYMTQGIYS--Y 377

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +L    +A RLF  M    +     SY ++L     A    EAI +   +  K 
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  + + YNT+    GK  +     +L ++M+  G  P+  TY+ +I+ +G+ G++D A 
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAI 497

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            +F++L  S  + D + Y ++I    + G V  A     E+++    P+ +   T +   
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +  R+E A  +F +    G   +I  +  +++   ++ + A  ++++ KM+  G  PDS
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDS 617

Query: 436 HIIALVL-----NSYGKLR 449
            I   VL      S+GK R
Sbjct: 618 -ITYTVLERLQSGSHGKSR 635



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 10/349 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YN +++ + + K  + A  +F  M + G  P+ YTYS ++     EG        +
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIV 363

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +  ++    G   +YS L+    KL   S+A  +F  + S  +  +  +Y +M+     A
Sbjct: 364 EISKRYMTQG---IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA  ++ ++ E+GV  DT+ Y+T+ +   +  +      +F +M +     D+ T 
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI+I  +G++    +A  +F  + +    P ++SYN+L+   G+     EA   F+ MQ 
Sbjct: 481 NILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K +  +VVTY+T+++ +GK+   E A +L +EM  +G +PN +TY+ ++    K+G+   
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAE 600

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           A  L+ K++  G+  D + Y  +    ER+   +H K     +R+ N I
Sbjct: 601 AVDLYTKMKQQGLTPDSITYTVL----ERLQSGSHGK---SRIRRKNPI 642



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 191/391 (48%), Gaps = 26/391 (6%)

Query: 88  DLVLYSNLIELARK--LSD-YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           D  LY+ +I +  +  LSD + +  SI   +  S +  ++   N +I  FG  +   + +
Sbjct: 132 DPFLYNRIILILSRSNLSDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGDTE---DLQ 188

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           + +  +++ G+K ++ +Y  LL  Y+ +    +A  V+ E+      LD+   N+++D  
Sbjct: 189 MCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDA- 247

Query: 205 GQLDMAKD--ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
               +AKD  A ++F  M+K        SY  ++R  G    + EA+ LF  M  + +  
Sbjct: 248 ----LAKDEKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTL 303

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAA 319
           NVV YNT++++  K    +KA  +   M   G  PN  TYS ++ +    G+  +LD   
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIV 363

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-PNTIPRETAITIL--- 375
            + ++  + G+      Y  ++    ++G V+ A RL  ++   P    R++ +++L   
Sbjct: 364 EISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             AG+  EA  +  +  + G V D  ++  +     + K+ +++ ++FEKM+  G  PD 
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGC 466
               ++++S+G++ E + A +++ E++   C
Sbjct: 478 FTYNILISSFGRVGEVDEAINIFEELERSDC 508



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 4/276 (1%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD I E ++   +   Y+ ++R + +      AH LF +M    +  +R +Y +++    
Sbjct: 359 LDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             G    AI  L ++ +  V  D ++Y+ +     KL   S    +F ++K  G  PD+ 
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN +I+ FG+     EA  + EE+     KPD +SY++L+N   +N    EA   F EM
Sbjct: 479 TYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E     D+ T + +++ +G+ +  + A  LF  M   G  P++V+YN LL    ++   
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRT 598

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKI----YGKS 277
            EA+ L+  M+++ +  + +TY  + ++    +GKS
Sbjct: 599 AEAVDLYTKMKQQGLTPDSITYTVLERLQSGSHGKS 634


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 236/537 (43%), Gaps = 5/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+++ LD +++       +FAY+ +L ++ R          +  M   G+ P+   Y+ +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G    A + ++++ +  +S D   Y+++I    +  D   A+ +F+++   G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+ V Y+T+IN    +    EA  LI EM   G+ P   + +  +    +   + +A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M    C  ++ T   +I       + K A  LF  M + G+ P+ V+YN L+ +  
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E      A  +  LM R     N+VTYN MIK Y    + +KA  +M  M  RG   N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII  +  +G    A  +   +R  G + D   Y  +I  + ++  +  A  L +E+
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 361 RQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P E   T L     +  +++ AT +      +G   ++  +  +I   ++   +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
           +   E+ + M   G FP+      +++   K      A +++++M E+GC+ +   +  +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +   G        E+LF  L+    I  +  +  +   Y  + ++  A   + RM K
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 200/459 (43%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP  F Y  ++    R    + A  +F++M + G  P+  TYSTLI      G  +
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +++M    +       +  I     +  Y  A  +F  +K+ G  P++  Y  +I
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    + L K A  L   M   GV P+TV+Y+ L+N+ VEN +   A  V   M    C 
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N MI  Y  L   K A  +  +M + G   ++V+YNT+++ Y ++     A+ +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM+    + +  +Y  +I  + K  + E A  L  EM + G+ PN +TY+ +I  + K
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER----VGLVAHAKRLLHELRQPNTIP 367
             KLD A  L + ++ SG   +   Y  +I    +     G     K ++ E   PN + 
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G    A  +F +  + G + ++  +  +I    +  K      +F ++ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G  PD      ++ +Y    + E A +    M + GC
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 214/489 (43%), Gaps = 36/489 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ Y  ++  +  +   ++A GLF  M + G+ P+  TY+ LI    +      A   
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++  S ++V Y+ +I+    L D  KA+ + + +   G   +LV YNT+I  +  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
           +     A  +++ MR+ G KPD  SY+ L+  + +  K   A  +F EM ++  CP ++T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID Y + +    A  L   M++ G  P+V +YN L+    +   F  A  L ++M
Sbjct: 533 Y-TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + I  NVVTY  MI    K+     A  +  +M  +G  PN +TYS++I   G+ GK+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           + A  LF +L   G+  D + Y  MI AY   G V HA   L  + +    P      +L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711

Query: 376 ARAGR----------------IEEATWVFRQAFDAGEVK-------------DISVFGCM 406
            +  +                +   ++ + Q  D   V               + V   +
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGY-QTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +   S   ++    E+   M S G  PD      +L S  ++R  + A  ++  M  +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830

Query: 467 VFSDQVHFQ 475
               +VH  
Sbjct: 831 ----EVHLN 835



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 202/455 (44%), Gaps = 41/455 (9%)

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +C  KE M  + +S+L  + Q  +   L  YS L+    +L   +  +  + R+ S G+ 
Sbjct: 154 SCHSKEAMART-MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+L+ YN +IN   K     +A  +++++ E  + PDT +Y++++  +   H    AL V
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 182 FAEMNEVNCPLDLTTCNIMID-------------------VYGQLDMA------------ 210
           F +M +  C  +  T + +I+                   ++G L  A            
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 211 ----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               +DA RLF  M+  G +P+V +Y  L+     + L   AI LF  M R  +  N VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN +I I  ++   + A  ++  M   G  PN +TY+ +I  +   G   +A ++   + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIE 382
             G   + V Y T+I  Y   G    A R+L  +R     P E + T L     +  ++E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  +F +  D G   +   +  +I+ + +++K      + E M+ +G  P+     +++
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   K   F  A++L   M EEG +F + V +  +
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTAM 606



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN +++        + A  + + M QRG + +  TY+T+I  +   G   SA+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M       D   Y+ LI    K+S    A  +F+ +   G+ P+ V Y  +I+ + 
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +    A  L+E M+  G +P+  +Y+ L++   + + F  A  +   M E     ++ 
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   MID   +      A  +F  M + G  P++++Y++L+R  G+     EA +LF  +
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +R  +  + +TY  MI+ Y  S + E A N +  M   G +P   TY  +I
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 122/258 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S ++  YN +++    +     A  + D MR  G  PD ++Y+ LI  F K    +SA 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M  D +  + V Y+ LI+   K      A S+   +K SG  P++  YN +I+  
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F  A  L + M E+G+ P+ V+Y+ +++   +N     AL +F +M E  C  +L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I   GQ    ++A+ LF  + + G+ P  ++Y  ++  Y  +     A +    
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 255 MQRKEIEQNVVTYNTMIK 272
           M +   +  + TY  +IK
Sbjct: 696 MIKAGCQPTLWTYGVLIK 713



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 68/436 (15%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD +  +    P  ++Y  ++    +  + E A GLF+EM   G+ P+  TY+ LI  +
Sbjct: 482 ILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K+   D+A S L+ M++     ++  Y+ LI    K +++S A  +   +   GI P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V Y  MI+   K      A  +  +M EQG  P+ ++YS+L+    +  K  EA ++FAE
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +       D  T   MI+ Y      + A      M K G  P++ +Y  L++      L
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 245 FGEAIHLFRLMQRKEIEQN----------------------------VVTYNTMIKIYGK 276
             +     RL    ++  N                            V   N ++     
Sbjct: 721 LADQ----RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI---- 332
           +    +A  L+  M ++G+ P+   Y++++    +   +D A  +F+ + + G E+    
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 333 -------------------------------DPVLYQTMIVAYERVGLVAHAKRLLHELR 361
                                          D V+   +I    R G        LH + 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 362 QPNTIPRETAITILAR 377
               +P     TILAR
Sbjct: 897 TRRYMPSFHIYTILAR 912


>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 179/360 (49%), Gaps = 1/360 (0%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           L+WI  +         YNV ++++   KQ+ L   L  +M   G+  D  TYST+I+C  
Sbjct: 176 LNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAK 235

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K  ++D A+ W ++M +  +  D V YS ++++  +L    + IS++ R +++G  PD +
Sbjct: 236 KCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPI 295

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            ++ +  +FG+A  +   R + +EM   GV+P+ V Y+TLL    +  K   A  +F EM
Sbjct: 296 TFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEM 355

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E     +  T   +I +YG+   ++DA  L+  M++ G     + YNTLL +  +  L 
Sbjct: 356 IESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 415

Query: 246 GEAIHLFRLM-QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            EA  LFR M Q    + +  +Y  M+ IYG   + +KA  L  EM   G+E N + ++ 
Sbjct: 416 EEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTC 475

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I   G+A + D    +F      G++ D  L   ++            +++L  L+Q N
Sbjct: 476 LIQCLGRAMEFDDLVRVFDISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQAN 535



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 177/356 (49%), Gaps = 6/356 (1%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           N + +   L  + K     + +++  ++P + + YN  +      K F     L  +M +
Sbjct: 158 NALLILNTLKPWQKTNLFLNWIRTQNLLPMETIFYNVTMKSLRFGKQFGLIEDLAHQMID 217

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
            GV  D ++YST+++   + + + +A+  F  M +     D  T + ++DVY +L   ++
Sbjct: 218 NGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEE 277

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              L+   R  G  P  ++++ L +++GEA  +    ++F+ M+   ++ N+V YNT+++
Sbjct: 278 VISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLE 337

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             GK+ +   A  L +EM   GI PN  T + +I I+GKA     A  L+Q+++ +G  +
Sbjct: 338 AMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPM 397

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D +LY T++     VGLV  A+ L  +++Q     P++      + I    G +++A  +
Sbjct: 398 DFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKL 457

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           F +    G   ++  F C+I+   R  ++ +++ VF+     G  PD  +   +L+
Sbjct: 458 FDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFDISVERGIKPDDRLCGCLLS 513



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 245 FGEAIHLFRLMQRKEIEQNV----VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           FG+   L   +  + I+  V    +TY+T+I    K   ++KA +  + M   G+ P+ +
Sbjct: 201 FGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEV 260

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYS I+ ++ + GK++    L+++ R++G + DP+ +  +   +   G     + +  E+
Sbjct: 261 TYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEM 320

Query: 361 R----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                QPN +   T +  + +AG+   A  +F +  ++G V +      +I+++ + +  
Sbjct: 321 ESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWS 380

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE-GCVFSDQVHFQ 475
            + +E++++M+  G+  D  +   +LN    +   E A+ L+ +M++   C      +  
Sbjct: 381 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTA 440

Query: 476 MLSLYGARKDFNMLESLFERL 496
           ML++YG++ D +    LF+ +
Sbjct: 441 MLNIYGSQGDVDKAMKLFDEM 461



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 135/276 (48%), Gaps = 5/276 (1%)

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           G+    ++Y+T++    +  L+ +A+H F  M +  +  + VTY+ ++ +Y +  + E+ 
Sbjct: 219 GVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEEV 278

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +L +  +  G +P+ IT+S +  ++G+AG  D    +FQ++ S GV+ + V+Y T++ A
Sbjct: 279 ISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEA 338

Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAIT----ILARAGRIEEATWVFRQAFDAGEVKD 399
             + G    A+ L  E+ +   +P E  +T    I  +A    +A  ++++  + G   D
Sbjct: 339 MGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMD 398

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLY 458
             ++  ++ + +          +F  M+ + +  PDS     +LN YG   + + A  L+
Sbjct: 399 FILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLF 458

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
            EM + G   +      ++   G   +F+ L  +F+
Sbjct: 459 DEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFD 494



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P++  YN +L  + +A +   A GLF+EM + GI P+  T + +I  +GK    
Sbjct: 321 ESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWS 380

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNT 129
             A+   Q+M+++    D +LY+ L+ +   +    +A ++F  +K S    PD  +Y  
Sbjct: 381 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTA 440

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           M+N++G      +A  L +EM + GV+ + + ++ L+       +F + + VF    E  
Sbjct: 441 MLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFDISVERG 500

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
              D   C  ++ V      + D +++   +++   +P +V++
Sbjct: 501 IKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQQA--NPKLVAF 541



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 10/282 (3%)

Query: 262 QNVVTYNTMI-KIYGKSLEHEKATNLMQ----EMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           QN++   T+   +  KSL   K   L++    +M + G+  + ITYSTII+   K    D
Sbjct: 182 QNLLPMETIFYNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYD 241

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A   F+++  +G+  D V Y  ++  Y R+G V     L    R     P     ++L 
Sbjct: 242 KAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLG 301

Query: 377 R----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +    AG  +   +VF++    G   ++ V+  ++E   +  K      +FE+M  +G  
Sbjct: 302 KMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIV 361

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+   +  V+  YGK R    A +L+  M+E G      ++  +L++          E+L
Sbjct: 362 PNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 421

Query: 493 FERLDSDSNINKKELHHV-VAGIYERANRLNDASRIMNRMNK 533
           F  +    +       +  +  IY     ++ A ++ + M K
Sbjct: 422 FRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCK 463


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VFAYN ++    +  + + A  + D MR +  +PD  TY+ +I      G  D A+  
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L Q+  D     ++ Y+ LIE         +A+ +   + S G+ PD+  YNT+I    K
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +   A  +I  +  +G +PD +SY+ LL   +   K+ E   +  +M    C  ++ T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I    +    ++A  L   M++ G+ P   SY+ L+  +        AI     M 
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKL 315
                 ++V YNT++    K+ + ++A  +  ++   G  PN+ +Y+T+  A+W    K+
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            RA  +  ++ S+G++ D + Y +MI    R G+V  A  LL ++R     P+ +     
Sbjct: 452 -RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           +    +A RIE+A  V       G   + + +  +IE
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 209/485 (43%), Gaps = 43/485 (8%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G +  ++  L+ M +   + D++L + LI+    L +  KA+ +   L+  G  PD+ 
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           AYN +IN F K     +A  +++ MR +   PDTV+Y+ ++       K   AL V  ++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 186 NEVNCPLDLTTCNIMID---VYGQLD---------------------------MAKDA-- 213
              NC   + T  I+I+   + G +D                           M K+   
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 214 DRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           DR F  +R +   G +P V+SYN LLR       + E   L   M  ++ + NVVTY+ +
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    +  + E+A NL++ M+ +G+ P+A +Y  +IA + + G+LD A    + + S G 
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             D V Y T++    + G    A  +  +L +    PN+    T  + L  +G    A  
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   D   +  MI    R        E+   MRS  + P      +VL  + 
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVH---FQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           K    E A D+   M   GC  ++  +    + +   G R +   L +   R+++ S  +
Sbjct: 516 KAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYS 575

Query: 504 KKELH 508
            K LH
Sbjct: 576 FKRLH 580



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 163/350 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +     + A  L DEM  RG+ PD +TY+T+I    KEGM D A   
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ +E      D++ Y+ L+        + +   + +++ S    P++V Y+ +I    +
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L++ M+E+G+ PD  SY  L+  +    +   A+     M    C  D+  
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  + ++G  P+  SYNT+      +     A+H+   M 
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+ + +TYN+MI    +    +KA  L+ +M++    P+ +TY+ ++  + KA +++
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 521

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            A  +   +  +G   +   Y  +I      G  A A  L ++L + N I
Sbjct: 522 DAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+V  Y++++  + R  + E A  L   M+++G+ PD Y+Y  LI  F +EG  D A
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK----------------- 116
           I +L+ M  D    D+V Y+ ++    K     +A+ IF +L                  
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443

Query: 117 ------------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
                             S+GI PD + YN+MI+   +  +  +A  L+ +MR     P 
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPS 503

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            V+Y+ +L  + + H+  +A+ V   M    C  + TT  ++I+  G
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 223/510 (43%), Gaps = 56/510 (10%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
            AYN+V+  + +  + + A  L +   ++G  PD Y YS LI  + K G    A+   + 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M    +  +  + S L++  RKL   S+ I+ F + K SG+  D V YN  ++ + K   
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA  L+ EM+  G+ PD + Y+ L+N Y    +   A  VF EM + N   D+ T NI
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +   + +  +  +   L   M   G++P+ ++Y   +  +       EA  LF +++ K 
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 260 IEQNVVTYNTMIKIY-------------------GKSLEH----------------EKAT 284
           I+   V Y++M+  Y                   G  ++H                + A+
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 300

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           N+ + M    + P+ I+YS +I+I+ + G +D+A + F  +   G+ ID ++Y  ++  Y
Sbjct: 301 NVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE------EATWVFRQAF------ 392
            + G +  A +L  ++      P   A T+L      E      E     R++F      
Sbjct: 361 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANH 420

Query: 393 --------DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
                   D     D+  +  +I+   + +      E+F++M   G  PD++    ++N 
Sbjct: 421 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 480

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHF 474
           Y    E   A+DL  EM ++G +  D++ F
Sbjct: 481 YCSQGEISKAEDLLQEMIDKG-IEPDELTF 509



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 167/373 (44%), Gaps = 27/373 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +A   P +  YN++     ++        L D M  +G+ P+  TY   I  F + G   
Sbjct: 168 KANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLS 227

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS-KAISIFSRLKSSGIVPDLVAYNTM 130
            A      +E+  +    V+YS+++     LS ++  A  +F R+   G + D  + + +
Sbjct: 228 EAEVLFNVVEEKGIDHIEVMYSSMV-CGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 286

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   +    + A  + + M E  V PD +SYS L+++Y +N    +A   F +M +   
Sbjct: 287 INDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 346

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL------ 244
            +D+    I+++ Y +    ++A +LF  M  +GI P V++Y  LL  + +  L      
Sbjct: 347 SIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 406

Query: 245 --------FGEAIH--LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
                      A H  L   M+  +IE +V  Y  +I    K+    +A  L  EM  +G
Sbjct: 407 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 466

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + P+A  Y+ +I  +   G++ +A  L Q++   G+E D + +  + +A E + +     
Sbjct: 467 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEVNIADEELSV----- 521

Query: 355 RLLHELRQPNTIP 367
               ++R+ N  P
Sbjct: 522 ----KIRKENEAP 530



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ +  P V  Y V++    +A+    A  LFDEM Q+G+ PD Y Y+ LI  +  +G  
Sbjct: 428 KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEI 487

Query: 71  DSAISWLQQMEQDRVSGDLVLYS 93
             A   LQ+M    +  D + +S
Sbjct: 488 SKAEDLLQEMIDKGIEPDELTFS 510


>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 1013

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 249/585 (42%), Gaps = 66/585 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  +P+ F Y VV+ +  +    E A   F EM++R   P+  TYS LI+   K G  +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +M+   +       ++++ L  K  DYSKA+S+FS ++ + IVPD V Y  ++
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387

Query: 132 NVFGKAKLFKEARLLIEE-----------------------------------MREQGVK 156
            ++GK  L+++A+ + EE                                   MR + VK
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P   SYS LL  +V       A   F  ++    P D+  CN ++ +Y +L     A  L
Sbjct: 448 PSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARAL 506

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV------TYNTM 270
              MRK  +        T+L V  +  +  +  +L  ++Q +     V+      T + M
Sbjct: 507 ILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMM 566

Query: 271 IKI-----------------YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +K                  + +    ++A  L + +   G +P+    +T+I  +G+A 
Sbjct: 567 LKSLLDKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQ 626

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
           +L++A  LF+   S+   +   +Y  M+ A  R G    A RL  EL       + +   
Sbjct: 627 QLEQAQKLFETA-STSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTIS 685

Query: 370 TAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             +T L +  + +EA   ++R   D  E+ D  V+   I+    + K  + + ++++M S
Sbjct: 686 ILVTHLTKQEKFQEAENIIYRCLHDEAEL-DTVVYNTFIKSMLESGKLYSAVSIYDRMIS 744

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +G         ++++ YG+  + E A +++S  QE G    ++ +  MLS YG     + 
Sbjct: 745 SGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHE 804

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              LF R+  D     K   + +   Y  +   N+A  I   M K
Sbjct: 805 ASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQK 849



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 214/479 (44%), Gaps = 30/479 (6%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV AY ++LR   +  + +LA   F EM Q G  PD     TL+  + + 
Sbjct: 159 WMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARW 218

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  +  + +   + +  +   + +++ ++   +K   + K I ++ ++  + + P+   Y
Sbjct: 219 GKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTY 278

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I  + K  + +EA     EM+ +   P+  +YS L++L  ++ K  EAL ++ EM  
Sbjct: 279 TVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKV 338

Query: 188 VN-CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
            +  P + T  +++   Y   D +K A  LF  M +  I P  V Y  L+R+YG+  L+ 
Sbjct: 339 KSIVPSNYTCASVLTLYYKNEDYSK-ALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYE 397

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A  +F  + +  +  +  TY  M +++     +++A  ++  M+ R ++P+  +YS ++
Sbjct: 398 DAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALL 457

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-T 365
                   +D A   F+ L + G   D      ++  Y R+G +  A+ L+ ++R+    
Sbjct: 458 RCHVAKEDVDAAEDTFRALSNYGPP-DVFCCNDLLRLYMRLGHLDKARALILKMRKEALQ 516

Query: 366 IPRETAITILARAGR------IEEATWVFRQAFDAGEV---KDISVFGCMIEL------- 409
              +  +T+L    +       +  T V +    + +V    D S    M++        
Sbjct: 517 FDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGG 576

Query: 410 ----------FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
                     F+R         ++E +   G  PD   IA ++  YG+ ++ E A  L+
Sbjct: 577 LSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLF 635



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 46/374 (12%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++  + R  + E A+ LF E+  +G   D  T S L+T   K+  F  A + + +  
Sbjct: 649 YNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCL 708

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            D    D V+Y+  I+   +      A+SI+ R+ SSGI   +  +N MI+V+G      
Sbjct: 709 HDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYG------ 762

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
                                        +  K  +A+ +F+   E+  P+D  T   M+
Sbjct: 763 -----------------------------QGGKLEKAVEMFSAAQELGLPIDEKTYTNML 793

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             YG+     +A  LF  M++ GI P  +S+NT++  Y  + L  EA  +F+ MQ+    
Sbjct: 794 SFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHV 853

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  TY  +I+ Y +   + KA   +Q M    + P+   ++ +I+ + K G++D A  +
Sbjct: 854 PDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRM 913

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLV-------AHAKRLLHELRQPNTIPRETAITI 374
           + ++  +G+  D    +TM+  +   G V         A RLL    +P++     A  +
Sbjct: 914 YNQMEEAGIPADLACCRTMMRMHLDHGYVDDGILFFETACRLL----KPDSFILSAAFHL 969

Query: 375 LARAGRIEEATWVF 388
              +GR  EA  V 
Sbjct: 970 YEHSGRESEAGDVL 983



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 2/333 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L++ + + G  PD    +TLI  +G+    + A    +        G  V Y+ +++   
Sbjct: 599 LYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETASTSFPVGGSV-YNAMVDALC 657

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +     +A  +F  L   G   D V  + ++    K + F+EA  +I        + DTV
Sbjct: 658 RCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTV 717

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+T +   +E+ K   A+S++  M     P  + T NIMI VYGQ    + A  +F + 
Sbjct: 718 VYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAA 777

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +++G+     +Y  +L  YG+A    EA  LF  M+   I    +++NTMI  Y  S  H
Sbjct: 778 QELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLH 837

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  + QEMQ     P++ TY  +I  + +     +A    Q +  S +      +  +
Sbjct: 838 NEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHL 897

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           I A+ + G +  A+R+ +++ +   IP + A  
Sbjct: 898 ISAFLKEGQIDEAQRMYNQMEEAG-IPADLACC 929



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/580 (19%), Positives = 238/580 (41%), Gaps = 66/580 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS +    VL    + + +  A  LF EM Q  I PD   Y  L+  +GK G+++ A   
Sbjct: 343 PSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRM 402

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV--- 133
            +++++  +  D   Y  + ++   + +Y +A+ +   +++  + P   +Y+ ++     
Sbjct: 403 FEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVA 462

Query: 134 ----------------FGKAKLF---------------KEARLLIEEMREQGVKPDTVSY 162
                           +G   +F                +AR LI +MR++ ++ D    
Sbjct: 463 KEDVDAAEDTFRALSNYGPPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLC 522

Query: 163 STLLNLYV------ENHKFVEALSVFAEMNEVNCPLDLTTCNIMI----DVYG------Q 206
            T+L +        +     E +      ++V  P D +T ++M+    D  G      Q
Sbjct: 523 VTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGGLSSVSQ 582

Query: 207 LDM-------AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           L M         +A  L+  + ++G  P   +  TL+  YG+A+   +A  LF       
Sbjct: 583 LIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETAS-TS 641

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
                  YN M+    +  + E+A  L  E+ ++G   +A+T S ++    K  K   A 
Sbjct: 642 FPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAE 701

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-----ITI 374
            +  +      E+D V+Y T I +    G +  A  +   +   + IPR        I++
Sbjct: 702 NIIYRCLHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMIS-SGIPRSMQTFNIMISV 760

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             + G++E+A  +F  A + G   D   +  M+  + +  K+     +F +M+  G  P 
Sbjct: 761 YGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPG 820

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
                 ++N+Y        A+ ++ EMQ+   V     +  ++  Y   K ++  E   +
Sbjct: 821 KISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQ 880

Query: 495 -RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             L S+   +    +H+++  + +  ++++A R+ N+M +
Sbjct: 881 MMLRSNMTPSCTHFNHLISA-FLKEGQIDEAQRMYNQMEE 919



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 5/346 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           + +  M  V  + + +++AR     M+ Q   +P  V+Y+ LL LY +  K   A   F 
Sbjct: 135 LTFREMCFVLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFL 194

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM +  C  D   C  ++  Y +     D    + ++R+  I PS+  +N ++    + +
Sbjct: 195 EMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQK 254

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L G+ IHL+  M    +  N  TY  +I  Y K    E+A +   EM+ R   P   TYS
Sbjct: 255 LHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYS 314

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I++  K GK + A  L+ +++   +        +++  Y +    + A  L  E+ Q 
Sbjct: 315 LLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQN 374

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             +P E    IL R     G  E+A  +F +   AG + D   +  M ++    + Y   
Sbjct: 375 KIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRA 434

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++V + MR+    P     + +L  +    + + A+D +  +   G
Sbjct: 435 LQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG 480



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 163/380 (42%), Gaps = 3/380 (0%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ L+ L  ++     A   F  +  +G  PD VA  T++  + +     +  +   
Sbjct: 170 VVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYA 229

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +R + + P    ++ +++   +     + + ++ +M E N   +  T  ++I  Y +  
Sbjct: 230 AVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEG 289

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
           M ++A   F  M++    P   +Y+ L+ +  +     EA+ L+  M+ K I  +  T  
Sbjct: 290 MLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCA 349

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++ +Y K+ ++ KA +L  EM+   I P+ + Y  ++ I+GK G  + A  +F+++  +
Sbjct: 350 SVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKA 409

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
           G+  D   Y  M   +  V     A ++L  +R  N  P + + + L R    +E     
Sbjct: 410 GLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAA 469

Query: 389 RQAFDA-GEVKDISVFGC--MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
              F A        VF C  ++ L+ R         +  KMR      D  +   VL   
Sbjct: 470 EDTFRALSNYGPPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVC 529

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    +  D+L   +Q EG
Sbjct: 530 CKTSINKDTDNLTEVIQNEG 549



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 134/279 (48%), Gaps = 10/279 (3%)

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E +VV Y  ++++YG+  + + A     EM   G EP+A+   T++  + + GKL+   M
Sbjct: 167 EPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
            +  +R   +     ++  M+ + ++  L      L  ++ + N  P +   T++    A
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA   F +      V + + +  +I L +++ K    + ++++M+     P ++
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A VL  Y K  ++  A  L+SEM++   V  + ++  ++ +YG    +   + +FE +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 497 DSDSNINKKELHHVVAGI------YERANRLNDASRIMN 529
           D    ++ ++ +  +A +      Y+RA ++ DA R  N
Sbjct: 407 DKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARN 445



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 41/243 (16%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+  +N+++    +  + E A  +F   ++ G+  D  TY+ +++ +GK G         
Sbjct: 750 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAG--------- 800

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
                                      + +A  +FSR+K  GI P  +++NTMIN +  +
Sbjct: 801 --------------------------KHHEASLLFSRMKEDGIRPGKISFNTMINAYATS 834

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  EA ++ +EM++    PD+ +Y  L+  Y E   + +A      M   N     T  
Sbjct: 835 GLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHF 894

Query: 198 NIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N +I  +   GQ+D   +A R++  M + GI   +    T++R++ +     + I  F  
Sbjct: 895 NHLISAFLKEGQID---EAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVDDGILFFET 951

Query: 255 MQR 257
             R
Sbjct: 952 ACR 954



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 115/242 (47%), Gaps = 4/242 (1%)

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EP+ + Y+ ++ ++G+ GK+  A + F ++  +G E D V   T++ AY R G +     
Sbjct: 167 EPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 356 LLHELRQPNTIPRETAITILARAGRIEE----ATWVFRQAFDAGEVKDISVFGCMIELFS 411
               +R+ + +P  +    +  + + ++       ++ Q  +A    +   +  +I  ++
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +       ++ F +M+   + P+    +L+++   K  + E A  LY EM+ +  V S+ 
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +L+LY   +D++   SLF  ++ +  +  + ++ ++  IY +     DA R+   +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 532 NK 533
           +K
Sbjct: 407 DK 408



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 1/170 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   ++N ++     +     A  +F EM++    PD +TY  LI  + +   +  A   
Sbjct: 819 PGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEA 878

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +Q M +  ++     +++LI    K     +A  ++++++ +GI  DL    TM+ +   
Sbjct: 879 IQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLD 938

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
                +  +L  E   + +KPD+   S   +LY  + +  EA  V   +N
Sbjct: 939 HGYVDDG-ILFFETACRLLKPDSFILSAAFHLYEHSGRESEAGDVLDAIN 987


>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Brachypodium distachyon]
          Length = 637

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 181/395 (45%), Gaps = 32/395 (8%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y   +FAYN++L  + +A   + A+ +F++M+Q+   PD YTY+ LI   GK G     +
Sbjct: 217 YKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFL 276

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S+  +M     + +L+ Y+ +IE   K     K I + S++  S   P+   Y+  +++ 
Sbjct: 277 SFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDIL 336

Query: 135 G--------------------------------KAKLFKEARLLIEEMREQGVKPDTVSY 162
                                            K+    EA  +   M       D  ++
Sbjct: 337 ATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAF 396

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            ++L +   + K +EA+ +   M E     D+   N++    G+L        LF  M+ 
Sbjct: 397 ISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKA 456

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            GI P + +YN ++  YG   L  +A  LF  M+    + +V+TYNT+I   GK+ + ++
Sbjct: 457 SGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDE 516

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  L +EMQ +G +P+  TYST+I  +GK+ K+D A  LF ++ + G   + V Y  ++ 
Sbjct: 517 AHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLD 576

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
             ER G  A A +    ++Q    P     +IL R
Sbjct: 577 CLERRGKTAEAHKHYETMKQQGLTPDSITYSILER 611



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 203/430 (47%), Gaps = 27/430 (6%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + Y  +++  LR+++      +++EM ++G   D + Y+ L+    K GM D A    + 
Sbjct: 187 YTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFED 246

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M+Q     D   Y+ LI ++ K     K +S F  + S G   +L+AYNT+I   GK K+
Sbjct: 247 MKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKM 306

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +   ++ +M E   +P+  +YS  L++          L+   +++ +N  LD+    +
Sbjct: 307 VDKVIFVLSKMIESDCQPNQFTYSLTLDI----------LATEGQLHRLNEVLDICDRYL 356

Query: 200 MIDVYGQL-------DMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +Y  L         A +A  +F   W+  + G   + +S   +L V   +    EAI
Sbjct: 357 NKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFIS---MLEVLCNSGKTLEAI 413

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L  +M  K I+ ++  YN +    GK  +    + L  +M+  GI P+  TY+ +I+ +
Sbjct: 414 DLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSY 473

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
           G+ G +D+A+ LF+++ +S  + D + Y T+I    + G +  A  L  E+++    P+ 
Sbjct: 474 GRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDV 533

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               T I    ++ +++ A  +F +    G + +I  +  +++   R  K A   + +E 
Sbjct: 534 FTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYET 593

Query: 426 MRSAGYFPDS 435
           M+  G  PDS
Sbjct: 594 MKQQGLTPDS 603



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 128/256 (50%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y+ +++++ ++     AH +F  M     + DR  + +++      G    AI  L  M 
Sbjct: 361 YSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMP 420

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +  +  D+ +Y+ +     KL   S   ++F ++K+SGI PDL  YN MI+ +G+  L  
Sbjct: 421 EKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVD 480

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L EEM     KPD ++Y+TL+N   +N    EA  +F EM E     D+ T + +I
Sbjct: 481 KASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLI 540

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +G+ +    A  LF  M   G  P++V+YN LL          EA   +  M+++ + 
Sbjct: 541 ECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLT 600

Query: 262 QNVVTYNTMIKIYGKS 277
            + +TY+ + ++  +S
Sbjct: 601 PDSITYSILERLESRS 616



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/438 (19%), Positives = 199/438 (45%), Gaps = 10/438 (2%)

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
           L R  +D  +A+ + ++++  G+  ++   N ++ +       + AR L E  ++ G++ 
Sbjct: 128 LFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGM--GGGGVEVARCL-ELAKKWGLRL 184

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           +  +Y  ++  ++ + +  +   V+ EM+     LD+   N+++D   +  M   A ++F
Sbjct: 185 NGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVF 244

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             M++    P   +Y  L+R+ G+     + +  F  M  +    N++ YNT+I+  GK+
Sbjct: 245 EDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKN 304

Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
              +K   ++ +M     +PN  TYS  + I    G+L R   L + L      ++  +Y
Sbjct: 305 KMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHR---LNEVLDICDRYLNKSIY 361

Query: 338 QTMIVAYERVGLVAHAKRLLHEL-RQPNTIPRETAIT---ILARAGRIEEATWVFRQAFD 393
             ++ +  + G  + A  +   +     +  R+  I+   +L  +G+  EA  +     +
Sbjct: 362 SYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPE 421

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   DI ++  +     + K+ + +  +F+KM+++G  PD     ++++SYG++   + 
Sbjct: 422 KGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDK 481

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  L+ EM+   C      +  +++  G   D +    LF+ +           +  +  
Sbjct: 482 ASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIE 541

Query: 514 IYERANRLNDASRIMNRM 531
            + ++N+++ A  + + M
Sbjct: 542 CFGKSNKVDMACSLFDEM 559



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  Y P VF Y+ ++    ++ + ++A  LFDEM   G  P+  TY+ L+ C  + G  
Sbjct: 525 QEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKT 584

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
             A    + M+Q  ++ D + YS ++E     S  +  I   SR+ S  + P
Sbjct: 585 AEAHKHYETMKQQGLTPDSITYS-ILERLESRSQRTARIRKPSRVTSWVVSP 635


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 214/467 (45%), Gaps = 10/467 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR-GIAPDRYTYSTLITCFGKEGMF 70
           EA  +P  F YN ++  + RA     A GLF +M +R G   DRY+Y+ LI      G  
Sbjct: 118 EAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRI 177

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A     +M +      +  Y+ L++   K+    +A ++   + + G+VP++V YN +
Sbjct: 178 DDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    +   F +   L+E+M  Q   PD  +Y+ +++   ++ K      V  E      
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            L++ T N +I+ Y +    K A  +   M++  ++P V ++N ++  +       +A+ 
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M    +  N VT+N++I       E + A  L+  M+  G+ P+  TY+  I    
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-- 368
             G+L+ A  LF  L   G++   V+Y +++  Y +VG +  A  L+ ++   N +P   
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVH 477

Query: 369 --ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              T I  L +  R++ A  +  +    G       F  +I+    +KK+A+  +++E+M
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 427 RSAGYFPDSHIIALVLNS---YGKLREFETADDLYSEMQEEGCVFSD 470
            S+G  PD     L +++    G  +E E  D    EM E G VF D
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKE-ENIDMAVVEMHEAG-VFPD 582



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 180/433 (41%), Gaps = 6/433 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  Y V+L  + + ++   A  L  EM  +G+ P+  TY+ LI    +EG FD     
Sbjct: 194 PGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKL 253

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++ME  R S D   Y+ ++    K         +       G+  +++ YN +IN + K
Sbjct: 254 LEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCK 313

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               K A  +++ M+   V P   +++ +++ +    K  +A++   +M       +  T
Sbjct: 314 GGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVT 373

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I     +   K A RL   M + G+ P   +Y   +    +     EA  LF  + 
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLP 433

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I+ + V Y +++  Y +  + + A  LM++M +    P+  TY+T+I    K  +LD
Sbjct: 434 MKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLD 493

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           RA  L  K++  G+E     +  +I         A A ++  ++      P +   T+  
Sbjct: 494 RAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKI 553

Query: 377 RAGRIEEAT------WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                E AT          +  +AG   D+  +  +I+ +              KM S  
Sbjct: 554 STDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVP 613

Query: 431 YFPDSHIIALVLN 443
             PD    +++LN
Sbjct: 614 IDPDCTTYSILLN 626



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 190/456 (41%), Gaps = 18/456 (3%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           L+ YS+    A +L+     ++ F  +  SG  P+   YNT+IN   K  L  +AR  + 
Sbjct: 58  LIAYSSRGSRAPRLAHL---LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALV 114

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC------NIMID 202
            MRE G+ PDT +Y+ L+           A  +F +M     P     C       I+I 
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM-----PRRWGACYDRYSYTILIK 169

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
                    DA R+F  M +    P V +Y  LL    +    GEA  L   M  K +  
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NVVTYN +I    +    +  T L+++M+ +   P+  TY+ ++    K GK+   A + 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
            +    GV ++ + Y  +I  Y + G +  A  +L  +++    P        I      
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G++ +A     Q   AG   +   F  +I       +    + + + M   G  PD    
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           A+ +++     + E A  L+S +  +G    + ++  ++  Y    D +    L E++ S
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           ++ +     ++ +     +  RL+ A  ++++M K+
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ 505



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 207/511 (40%), Gaps = 65/511 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           E  R+SP  + Y  V+  +   K  ++ HG  +  E   +G+A +  TY+ LI  + K G
Sbjct: 258 EIQRHSPDCWTYTQVVHGL--CKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
              +A+  LQ M+++RV+  +  ++ +I          KA++  +++  +G+ P+ V +N
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           ++I+        K A  L++ M E GV PD  +Y+  ++   +  +  EA S+F+ +   
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID---PSVVSYNTLLRVYGEAELF 245
                      ++  Y Q+    D D  F  M KM  +   P V +YNTL+    + +  
Sbjct: 436 GIKAHNVIYTSLVHGYCQVG---DIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRL 492

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             AI L   M+++ IE    T+N +IK      +H  A  + ++M + G +P+  TY+  
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLK 552

Query: 306 IAI-WGK-AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL-----VAHAKRL-- 356
           I+  W + A K +   M   ++  +GV  D   Y  +I AY   GL      AH K L  
Sbjct: 553 ISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSV 612

Query: 357 --------------------------------------LHELRQ--------PNTIPRET 370
                                                 L EL +        P     + 
Sbjct: 613 PIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKA 672

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            +  L    R+EE  W+  +      + D  +   ++  +   + Y    E F  M    
Sbjct: 673 LLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQS 732

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           + P      L+L+      +   A  ++S+M
Sbjct: 733 FQPGLKSCCLLLSGLCDSGDHGMAVSIFSDM 763



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/435 (19%), Positives = 161/435 (37%), Gaps = 53/435 (12%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P    Y + +  +    Q E AH LF  +  +GI      Y++L+  + + G  
Sbjct: 398 EEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDI 457

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           DSA   +++M  +    D+  Y+ LI+   K+    +AI +  ++K  GI P    +N +
Sbjct: 458 DSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I      K   +A  + E+M   G KPD  +Y                            
Sbjct: 518 IKQMLWDKKHADAAKMYEQMISSGCKPDKQTY---------------------------- 549

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                T  I  D +      ++ D     M + G+ P V +YN +++ Y +A L  +A  
Sbjct: 550 -----TLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604

Query: 251 LFRLMQRKEIEQNVVTYNTMI---------------KIYGKSLEHEKATNLMQEMQNRGI 295
               M    I+ +  TY+ ++               KI+ K ++      L ++M     
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIW-KMVDVRNLQELFEQMCESDA 663

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA-- 353
            P   TY  ++       +L+    L  K++ + + +D  +   ++  Y  + +   A  
Sbjct: 664 APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACE 723

Query: 354 --KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
             + + H+  QP        ++ L  +G    A  +F      G   D  V+  +I+   
Sbjct: 724 QFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLH 783

Query: 412 RNKKYANVIEVFEKM 426
                   +E+   M
Sbjct: 784 EKGHAGACLEMLSVM 798


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 4/356 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
            + +++ +  + R  P+   YN ++    +A   E A  LFD+M + G+ P+  T +TL+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  + A+ +  +M+   + G+ V Y+ LI     +++  KA+ +F  +  +G  
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           PD + Y T+I+   +A     A  ++ +M+E G  PD VS++ L+N +   +K  EA  +
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM       D  T N +I  + +      A RL   M K G+ P+VV+Y  L+  Y  
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCL 638

Query: 242 AELFGEAIHLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                EA+ +FR M    ++  N V YN +I    +  + + A +LM +M+ +G++PN  
Sbjct: 639 NGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           T++ +     +   L +A  L  ++       D   Y TM +  E +  V    +L
Sbjct: 699 TFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD---YITMEILTEWLSAVGETAKL 751



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 230/518 (44%), Gaps = 63/518 (12%)

Query: 38  AHGLFDEMRQR---GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSN 94
            H +F  + +R   G A D      L++ F +  +F ++I WL Q           L S 
Sbjct: 232 GHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSI-WLTQ-----------LISR 279

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L    R      +A  +   L   G V +  + N ++   G+A+ FK    L+ EM+E  
Sbjct: 280 LCRSGRT----DRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMN--EVNCPL---DLTTCNIMIDVYGQLDM 209
           ++P+ V++  L+N   +  +  EAL VF +MN  E N  L   D+ T N +ID   ++  
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395

Query: 210 AKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
            ++   L   MR      P+ V+YN L+  Y +A +   A  LF  M +  +  NVVT N
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++    K      A     EMQ +G++ NA+TY+ +I  +     +++A  LF ++  +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
           G   D ++Y T+I                                 L++AG+++ A++V 
Sbjct: 516 GCSPDAIVYYTLISG-------------------------------LSQAGKLDRASFVL 544

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +  +AG   DI  F  +I  F R  K     E+ ++M +AG  PD      +++ + K 
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE-L 507
            +F TA  L  +M +EG V +   +  ++  Y    + +    +F  + S S +     +
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVI 664

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKR------RTFNS 539
           ++++     R N+++ A  +M+ M  +       TFN+
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNA 702



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 199/425 (46%), Gaps = 11/425 (2%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           + N +L  + RA++++  + L  EM++  I P+  T+  LI    K    D A+   ++M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366

Query: 81  EQDRVSG-----DLVLYSNLIELARKLSDYSKAISIFSRLKSSG-IVPDLVAYNTMINVF 134
                +G     D++ Y+ LI+   K+    + + +  R++S    +P+ V YN +I+ +
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KA + + AR L ++M + GV P+ V+ +TL++   ++ +   A+  F EM       + 
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +I  +  ++  + A  LF  M + G  P  + Y TL+    +A     A  +   
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+      ++V++N +I  + +  + ++A  +++EM+N GI+P+ +TY+T+I+ + K G 
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRE 369
              A  L +K+   G+    V Y  +I AY   G +  A ++  ++       PNT+   
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I  L R  +++ A  +       G   + + F  M +        +   E+ ++M   
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726

Query: 430 GYFPD 434
              PD
Sbjct: 727 ACNPD 731



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 167/362 (46%), Gaps = 2/362 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P V  YN ++  + +  + E   GL + MR Q    P+  TY+ LI  + K  M ++A  
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              QM +D V  ++V  + L++   K    + A+  F+ ++  G+  + V Y  +I  F 
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                ++A  L +EM E G  PD + Y TL++   +  K   A  V ++M E     D+ 
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N++I+ + + +   +A  +   M   GI P  V+YNTL+  + +   F  A  L + M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG-IEPNAITYSTIIAIWGKAGK 314
            ++ +   VVTY  +I  Y  +   ++A  + ++M +   + PN + Y+ +I    +  +
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D A  L   ++  GV+ +   +  M    +    ++ A  L+  + +    P    + I
Sbjct: 678 VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEI 737

Query: 375 LA 376
           L 
Sbjct: 738 LT 739



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 189/446 (42%), Gaps = 66/446 (14%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPD--LVAYNTMINVFGKAKLFKEAR---LLIE 148
           NL+++ R L   +KA+  F+ ++++    D  L+++ T+  VF  A     +    L + 
Sbjct: 89  NLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLSF-TLEAVFEHASREPNSHNKLLDLF 147

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFV-EALSVFAEMNEVNCPLDLTTC--NIMIDVYG 205
           +  +    P +V+ +TLL       + V E+  V+ E+    CP    T   NI+IDV  
Sbjct: 148 KTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRNILIDVLF 203

Query: 206 QLDMAKDADRLFWSM--RKMGIDPSVVSYNT----------------------LLRVYGE 241
           +     DA  L   M   K    P+  + +                       L+  + E
Sbjct: 204 RKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAE 263

Query: 242 AELFGEAIHLFRLMQRK----------EIEQNVV---------TYNTMIKIYGKSLEHEK 282
            E+F  +I L +L+ R           ++   ++         + N ++   G++ E ++
Sbjct: 264 HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKR 323

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL---RSSG--VEIDPVLY 337
              L+ EM+   I+PN +T+  +I    K  ++D A  +F+K+    S+G  VE D + Y
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383

Query: 338 QTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWVFRQAF 392
            T+I    +VG       L+  +R      PNT+     I    +A  IE A  +F Q  
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G   ++     +++   ++ +    +E F +M+  G   ++     ++ ++  +   E
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLS 478
            A +L+ EM E GC     V++ ++S
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLIS 529


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 202/426 (47%), Gaps = 5/426 (1%)

Query: 21   AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
             Y +++  + +A++  LA  L ++M+      D +TY  +I    K+GM   A+    +M
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEM 1111

Query: 81   EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
                +  D+V+YS+L++   +     +A+  F  ++  GI  D+  YN++I+   +A L+
Sbjct: 1112 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            KE    +  M ++G  PD  +++ L++   +  K  EA  +   M       D+ T N +
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
            ++    +   +DA +LF S+   GI  +V SYN L+  Y + +   EA   F  M+ K +
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 261  EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
            + + VTYNT+I    +S     A  L  EMQ  G      TY  ++    K G L+ A  
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 321  LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILA 376
            LFQ ++ +  + +  ++  ++    R G +  A +   E+     +P+TI     I  L 
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411

Query: 377  RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
              G + EA  +  Q  + G + D   F  +I+   +  +    I++ E+MR+  + PD  
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471

Query: 437  IIALVL 442
            + +++L
Sbjct: 1472 VTSMLL 1477



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 208/452 (46%), Gaps = 5/452 (1%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            + P       +++ V        A  LFDEM ++G+  D  TY  LI    K      AI
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAI 1071

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               ++M+ +   GD+  Y  +I+   K    ++A+ +FS +  +GI+PD+V Y+++++  
Sbjct: 1072 KLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 1130

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             +    KEA    +EM  +G+  D  +Y++L++       + E       M +     D 
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
             T  I+ID   +     +A ++   MR  G +P +++YNTL+          +A  LF  
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +  + I+ NV +YN +I  Y K  + ++A    +EM+ +G++P+ +TY+T+I    ++G+
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            +  A  LF ++++ G  +    Y  ++    + G +  A  L   +++    P     +I
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370

Query: 375  L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            L     RAG++EEA   F +    G   D   +  +I         +  +++  +M   G
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
              PDS    +++ +  K  E   A  L  EM+
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 1462



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 206/465 (44%), Gaps = 6/465 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P ++  N+++      +      G+F    +RG  PD  T +TL+     E     A+  
Sbjct: 979  PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              +M +  + GD   Y  LI    K      AI +  ++K +    D+  Y  +I+   K
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCK 1097

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +  EA  +  EM   G+ PD V YS+L++      +  EAL  F EM       D+ T
Sbjct: 1098 DGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYT 1157

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             N +I    +  + K+       M   G  P   ++  L+    +    GEA  +  LM+
Sbjct: 1158 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             K  E +++TYNT++       + E AT L + + +RGI+ N  +Y+ +I  + K  K+D
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277

Query: 317  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
             A   F+++R  G++   V Y T+I A  + G V  A++L  E++      + +   +L 
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337

Query: 376  ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                + G +EEA  +F+         +I VF  +++   R  K     + F+++   G  
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397

Query: 433  PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            PD+    +++N          A  L  +M+E+GC+  D + F ++
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL-PDSITFNVI 1441



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/453 (21%), Positives = 202/453 (44%), Gaps = 5/453 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P    +N +L +V +   +     ++ ++   GI PD YT + LI C             
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                 +     D V  + L++     +    A+ +F  +   G++ D   Y  +IN   K
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            A+    A  L E+M+    K D  +Y  +++   ++    EAL +F+EM       D+  
Sbjct: 1064 ARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             + ++D   +    K+A   F  M   GI   V +YN+L+     A L+ E      LM 
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 257  RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
             +    +  T+  +I    K  +  +A  +++ M+++G EP+ +TY+T++      G+L+
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 317  RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
             A  LF+ L   G++++   Y  +I  Y +   +  A R   E+R    +P+T+   T I
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 373  TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              L ++GR+  A  +F +    G+   +S +  +++   +N      +++F+ ++   + 
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 433  PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P+  + +++L+   +  + E A   + E+ + G
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 2/360 (0%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P V  Y+ ++  + R  + + A   F EM  RGI+ D YTY++LI    + G++   ++W
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW-KEVTW 1176

Query: 77   LQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               +  DR  S D   ++ LI+   K     +A  I   ++  G  PD++ YNT++N   
Sbjct: 1177 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC 1236

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 ++A  L E + ++G+K +  SY+ L+N Y ++ K  EA   F EM          
Sbjct: 1237 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T N +I    Q    + A +LF  M+  G    + +Y  LL    +     EA+ LF+ +
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI 1356

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ E + N+  ++ ++    ++ + E+A     E+   G+EP+ I Y+ +I      G L
Sbjct: 1357 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
              A  L  ++   G   D + +  +I    +   +  A +LL E+R  N  P E   ++L
Sbjct: 1417 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 155/327 (47%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            S  V+ YN ++  + RA  W+      + M  RG +PD +T++ LI    KEG    A  
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             L+ M       D++ Y+ L+     +     A  +F  L   GI  ++ +YN +IN + 
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            K +   EA    EEMR +G+KP TV+Y+TL+    ++ +   A  +F EM      L L+
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            T  +++D   +    ++A  LF S++K    P++  ++ LL     A    EA   F  +
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +  +E + + YN +I          +A  L+ +M+ +G  P++IT++ II    K  ++
Sbjct: 1392 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 1451

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIV 342
              A  L +++R+     D  +   ++ 
Sbjct: 1452 HEAIQLLEEMRNRNFSPDEAVTSMLLC 1478



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 207/500 (41%), Gaps = 46/500 (9%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            LFD        P   T++ L+    K G + +     +++    +  DL   + LI    
Sbjct: 933  LFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCC 992

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             L        +F      G  PD V   T++          +A  L +EM ++G+  D  
Sbjct: 993  SLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAK 1052

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y  L+N   +  K   A+ +  +M   NC  D+ T  ++ID   +  M  +A  +F  M
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEM 1111

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
               GI P VV Y++L+          EA+  F+ M+ + I  +V TYN++I    ++   
Sbjct: 1112 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            ++ T  +  M +RG  P+A T++ +I    K GK+  A  + + +R              
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR-------------- 1217

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
                             H+ ++P+ +   T +  L   G++E+AT +F    D G   ++
Sbjct: 1218 -----------------HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 401  SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
              +  +I  + +++K       FE+MR  G  P +     ++ +  +     TA  L+ E
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 461  MQEEGCVFSDQVHFQMLSLY-----GARKDFNMLES--LFERLDSDSNINKKELHHVVAG 513
            MQ  G        F  LS Y     G  K+ ++ E+  LF+ +    +    E+  ++  
Sbjct: 1321 MQTCG-------QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLD 1373

Query: 514  IYERANRLNDASRIMNRMNK 533
               RA +L +A +  + ++K
Sbjct: 1374 GMCRAGKLEEAWKQFDEISK 1393



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 136/294 (46%)

Query: 15   YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
            +SP  F + +++  + +  +   A  + + MR +G  PD  TY+TL+      G  + A 
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245

Query: 75   SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               + +    +  ++  Y+ LI    K     +A   F  ++  G+ P  V YNT+I   
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             ++   + A+ L  EM+  G      +Y  LL+   +N    EA+ +F  + +     ++
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
               +I++D   +    ++A + F  + K G++P  ++YN L+       +  EA+ L   
Sbjct: 1366 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            M+ K    + +T+N +I+   K  E  +A  L++EM+NR   P+    S ++ +
Sbjct: 1426 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 1479



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 35/158 (22%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            ++  + P++  ++++L  + RA + E A   FDE+ + G+ PD   Y+ LI     +GM 
Sbjct: 1357 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
              A+  L QME+                                    G +PD + +N +
Sbjct: 1417 SEAVKLLWQMEE-----------------------------------KGCLPDSITFNVI 1441

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
            I    K     EA  L+EEMR +   PD    S LL L
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 1479



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 38/83 (45%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AYN+++  +        A  L  +M ++G  PD  T++ +I    KE     AI  
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 77   LQQMEQDRVSGDLVLYSNLIELA 99
            L++M     S D  + S L+ LA
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLA 1480


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 207/458 (45%), Gaps = 45/458 (9%)

Query: 15  YSPSVFAYNVVLRNV-LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P++  +N ++R + +  K  E+ H LFD+M   G  P+  TY TLI    K G   +A
Sbjct: 125 HQPNIATFNTLIRGLCVEGKIGEVLH-LFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  L+ MEQ     D+V+Y+++I+   K    ++A ++FS +   GI P +  YN++I+ 
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 243

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                 +K    L+ EM    + P+ V +ST+++   +  K +EA  V            
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV------------ 291

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                        +DM          M K G++P+VV+YN L+  +       EA+ +F 
Sbjct: 292 -------------VDM----------MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K    +VV+Y+T+I  Y K    EKA  L +EM  + + PN +TYST++      G
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +L  A  LF ++ + G   D V Y  ++    +   +  A  LL  +   N  P     T
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 448

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           I    + RAG +E A  +F      G   ++  +  MI    +    A   ++F +M+  
Sbjct: 449 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508

Query: 430 GYFPDSHIIALVLNSYGKLREFET--ADDLYSEMQEEG 465
           GY P+     L+  + G LR  ET     L  EM   G
Sbjct: 509 GYSPNGCTYNLI--TRGFLRNNETLRGIQLLQEMLARG 544



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 191/428 (44%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ L+    K   + + +S   QM+   +  ++   + LI     
Sbjct: 47  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 106

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L     A S+ +++   G  P++  +NT+I          E   L ++M  +G +P+ V+
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +   M + NC  D+     +ID   +      A  LF  M 
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI PS+ +YN+L+        +     L   M   +I  NVV ++T++    K  +  
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +++  M  RG+EPN +TY+ ++       ++D A  +F  +   G   D V Y T+I
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+ +    PNT+   T +  L   GR+++A  +F +    G++
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D   +  +++   +N++    I + + +  +   PD  I  +V++   +  E E A DL
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 458 YSEMQEEG 465
           +S +  +G
Sbjct: 467 FSNLSSKG 474



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 162/347 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+F YN ++  +    +W+    L +EM    I P+   +ST++    KEG    A  
Sbjct: 231 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 290

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M +  V  ++V Y+ L++     S+  +A+ +F  +   G  PD+V+Y+T+IN + 
Sbjct: 291 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 350

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +  ++A  L EEM  + + P+TV+YSTL++      +  +A+++F EM       D  
Sbjct: 351 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 410

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +  I++D   +     +A  L  ++    +DP +  Y  ++     A     A  LF  +
Sbjct: 411 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 470

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  NV TY  MI    +     +A+ L  EM+ +G  PN  TY+ I   + +  + 
Sbjct: 471 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 530

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            R   L Q++ + G   D      ++      GL    K++L E  Q
Sbjct: 531 LRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 162/350 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF EM  +GI+P  +TY++LI        +
Sbjct: 191 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 250

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L +M   ++  ++V++S +++   K     +A  +   +   G+ P++V YN +
Sbjct: 251 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M  +G  PD VSYSTL+N Y +  +  +A+ +F EM     
Sbjct: 311 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + ++     +   +DA  LF  M   G  P  VSY  LL    +     EAI 
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   ++ ++  Y  +I    ++ E E A +L   + ++G+ PN  TY+ +I    
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           + G L  A+ LF +++  G   +   Y  +   + R        +LL E+
Sbjct: 491 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 222/448 (49%), Gaps = 12/448 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S   Y++++R ++ + + + A     E+  R I P   T  ++I    K G  DSA+S
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395

Query: 76  WLQQMEQDRVSGDLVLYSNLI-ELAR--KLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            L+ M +     D+  +S LI EL +  K+ +  + +    R K S       +YN+++N
Sbjct: 396 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDR-KISSRSSSCFSYNSLLN 454

Query: 133 VFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              KAK   +A  +   M  E+   PD VSYS L++ + +  +   A  ++ +M ++NC 
Sbjct: 455 SLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 514

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++TT N  ++   +     DA  ++  M   G  P V++Y+TL+  +  A    +A  L
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  +    N VTYN ++    K  + ++A  L ++M  RG +P+ +TY+T++  +  
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL--RQ--PNTIP 367
            GK+++A  +F ++ S G + D V Y  ++  + R G    AK+L   +  RQ  P+T+ 
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694

Query: 368 RETAITILARAGRIEEATWVF-RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
               I  L++A R+++A  VF R   D G   D+  +  +I      ++ +  ++VF+++
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754

Query: 427 RSAGYFPDSHIIALVLNS--YGKLREFE 452
                 PD H   ++L +   G + +FE
Sbjct: 755 DRLKLSPDPHAFNVLLEAIKCGIVYQFE 782



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 200/452 (44%), Gaps = 40/452 (8%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMR--QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           A+   L  + ++ + E A   F+  R  Q  ++  +  Y  LI    + G  D A     
Sbjct: 307 AWTAFLSGLCKSGKIEQA---FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL 363

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           ++    +        ++I+   K      A+S+   +   G  PD+  ++ +IN   KA 
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423

Query: 139 LFKEARLLIEEMREQ--GVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
             +EA+  ++ M  +         SY++LLN   +  K  +A ++F+ M +E +   D+ 
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + +I+ID + ++D    A++L+  M  +   P+V +YN  L          +A  ++  M
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  +V+TY+T+I  +  + +H++A  L + M +RG  PNA+TY+ ++    K  K 
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A  LF+K+   G + D V Y T++  +  VG                           
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG--------------------------- 636

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
               +IE+A  VF +    G   D+  + C+++ F R  K     ++F+ M S    PD+
Sbjct: 637 ----KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692

Query: 436 HIIALVLNSYGKLREFETADDLYSEM-QEEGC 466
               ++++   K +  + A +++  M Q+ GC
Sbjct: 693 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 165/356 (46%), Gaps = 47/356 (13%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++ AI   +  E  + P V +Y++++    +  +   A  L+ +M      P+  TY+  
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 523

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKS 117
           +    ++G    A    ++M     S D++ YS LI    LARK   + +A  +F  + S
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARK---HDQAHELFETMIS 580

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
            G  P+ V YN +++   K     EA  L  +M E+G  PD V+Y+TLL  +    K  +
Sbjct: 581 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQ 640

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A+ VF EM                       ++K            G DP VV+YN LL+
Sbjct: 641 AVEVFDEM-----------------------VSK------------GHDPDVVAYNCLLK 665

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIE 296
            +  A   GEA  LF++M  ++ + + V++N MI    K+   + A  + + M Q+ G  
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 725

Query: 297 PNAITYSTIIAIWGKAG--KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           P+ +TY+++  I+G  G  +L  A  +F+++    +  DP  +  ++ A  + G+V
Sbjct: 726 PDLVTYNSL--IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI-KCGIV 778



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 222/522 (42%), Gaps = 57/522 (10%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W+  +AR +   VF YN +L  ++R +  + A  +F++M  +G+ P+ +TY+ L+     
Sbjct: 119 WL--QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCY 176

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR-LKSSGIVPDLV 125
           E   D A+ +  +M          LY  + E  +      +   +F R L+    V  ++
Sbjct: 177 ERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMML 236

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
               ++N   + K   EA  L   M + G KPD   YS ++  + +     EA  +F EM
Sbjct: 237 KKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEM 295

Query: 186 N-EVNCPLDLTTCNIMIDVY-GQLDMAKDADRLFWSMRKM--GIDPSVVSYNTLLRVYGE 241
             E   PL+    N+    +   L  +   ++ F + R M   +  S   Y+ L+R+  E
Sbjct: 296 AVESKAPLN----NVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIE 351

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           +    +A      +  + I+ +  T +++I+   K+   + A +L++ M  RG  P+  T
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKL----------------------RSSGVE-------- 331
           +S +I    KA K+  A    Q +                      ++  V         
Sbjct: 412 HSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFST 471

Query: 332 --------IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAG 379
                    D V Y  +I  + ++  +  A++L  ++   N +P  T     +  L R G
Sbjct: 472 MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 531

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           RI +A  V+ +   AG   D+  +  +I  FS  +K+    E+FE M S G  P++    
Sbjct: 532 RIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYN 591

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
            +L+   K  + + A +L+ +M E GC   D+V +  L LYG
Sbjct: 592 CLLHGLCKESKPDEAHELFRKMVERGCD-PDRVTYTTL-LYG 631



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 192/491 (39%), Gaps = 36/491 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAP-DRYTYSTLITCFGKEGMFDSAIS 75
           P    Y+ ++    + +  + A  LF EM     AP +   ++  ++   K G  + A  
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + M Q+ +S    +Y  LI L  +     KA      +    I P     +++I    
Sbjct: 327 ACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC 385

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLD 193
           KA     A  L+E M ++G  PD  ++S L+N   +  K  EA      M+    +    
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSS 445

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSM-RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + N +++   +      A  +F +M  +    P VVSY+ L+  + + +  G A  L+
Sbjct: 446 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           + M       NV TYN  +    +      A  + +EM   G  P+ ITYST+I  +  A
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
            K D+A  LF+ + S G   + V Y                  LLH L            
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNC----------------LLHGL------------ 597

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +  + +EA  +FR+  + G   D   +  ++  F    K    +EVF++M S G+ 
Sbjct: 598 ---CKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PD      +L  + +  +   A  L+  M    C      H  M+      K  +    +
Sbjct: 655 PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEV 714

Query: 493 FERLDSDSNIN 503
           FER++ D   +
Sbjct: 715 FERMEQDHGCS 725



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 11/404 (2%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+++ + ++      D+  Y+ L++   +  D  +A  +F ++ + G+VP+   Y  ++ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                +   EA     EM ++G KP +  Y  +        K  E   VF    E    +
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           ++     ++  +   D A +A +LF +M K G  P    Y+ ++  + + E   EA  LF
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292

Query: 253 RLMQ-RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             M    +   N V +   +    KS + E+A    + MQ   +  +   Y  +I +  +
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIE 351

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
           +G++D+A     ++    ++       ++I    + G V  A  LL  + +    P+   
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411

Query: 368 RETAITILARAGRIEEATWVFRQAFD---AGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
               I  L +A +I+EA   F Q  D   +        +  ++    + KK      +F 
Sbjct: 412 HSMLINELCKADKIQEAQE-FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFS 470

Query: 425 KMRSAGYF-PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            M S   F PD    +++++ + K+ E   A+ LY +M +  CV
Sbjct: 471 TMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 514



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 123/302 (40%), Gaps = 22/302 (7%)

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           GEA+  FR +Q +  + +V TYN ++    +  + ++A  + ++M  +G+ PN  TY+ +
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           +         D A   F ++   G +    LYQ +    +  G      R+         
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG-----RD 225

Query: 366 IPRETAITILARAG---------RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           + +  A+ ++ +           +  EA+ +FR    +G   D +++  M+    + +  
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 417 ANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
               ++F +M      P +++     L+   K  + E A +    MQE   + S Q  + 
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES--LSSSQPVYD 343

Query: 476 MLS---LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
           ML    +   R D    E+  E    +   +    H V+  +  +A R++ A  ++  M 
Sbjct: 344 MLIRLLIESGRID-KAEEACLEIAGRNIQPSSGTCHSVIQELC-KAGRVDSALSLLETMI 401

Query: 533 KR 534
           KR
Sbjct: 402 KR 403


>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
 gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
          Length = 1354

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 208/445 (46%), Gaps = 5/445 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+     V  YN ++    R   W     L   M+ RG  PD  T++ +I    + GM +
Sbjct: 107 ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQE 166

Query: 72  S-AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S LQ +    +  D + Y+ LI      +  S AI IF  ++  G  PD+  YN M
Sbjct: 167 GLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAM 226

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+V+G+A   + A  +   M+EQG  PD V+Y+++L+ +  + +  E   +   M +  C
Sbjct: 227 ISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARC 286

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N MI +YG+  M + A+ L+  M++ G  P  V++  L+   G+A    EA  
Sbjct: 287 SSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 346

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M + ++   +  ++ MI  Y K+     A +    M   G+ P+ + YS ++ ++ 
Sbjct: 347 MFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFF 406

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KA   ++  +L++ +  SG++ +  +Y  M+  + +   +A  + L  E+ Q ++     
Sbjct: 407 KAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQ-SSASLAA 465

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             + LA+ G   EA  V + +F  G    +     ++  F  + K ++  ++   + S  
Sbjct: 466 LSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIE 525

Query: 431 YFPDSHI---IALVLNSYGKLREFE 452
               +H+   +AL+L   G+  E E
Sbjct: 526 PSVAAHLYKRLALMLAKAGRFSEAE 550



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 199/438 (45%), Gaps = 11/438 (2%)

Query: 33   KQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLY 92
            K W+ A  +F ++++ G A +   YS L++ + + G F+ A   L  M    +  +    
Sbjct: 649  KLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACA 708

Query: 93   SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
            + ++E   +     +    + RL   GI P+   +  + + F +    +EAR +  +MRE
Sbjct: 709  NYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMRE 768

Query: 153  QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
             G  P    +  LL LY      ++A  +  ++ +    LD+   N MI +Y +L   + 
Sbjct: 769  AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRK 828

Query: 213  ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
            A  +F  M+++G  P   ++NTL+ +Y   ++  EA  L R M +     N+ TY T+I 
Sbjct: 829  AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 888

Query: 273  IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             YG+   +E A  + + +   G +P+A  Y+ +I ++ KAG+  +   + +++++ G E 
Sbjct: 889  AYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEP 948

Query: 333  DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI-TILARAGRIEEATWV 387
                   ++ +Y + G    A+ +L  L +    P+ I   + I + L     +    W+
Sbjct: 949  SLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWL 1008

Query: 388  FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             R+  DA          C +   S  ++ ++ + + + +  AG+      + L L +   
Sbjct: 1009 -RKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKALSEAGFS-----LPLRLMTECT 1062

Query: 448  LREFETADDLYSEMQEEG 465
             +  +   D++ ++QE G
Sbjct: 1063 PKVVQDMQDIFDQLQESG 1080



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/589 (19%), Positives = 240/589 (40%), Gaps = 75/589 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P ++ YN ++    RA + E A  +F  M+++G  PD  TY++++  F ++G  +     
Sbjct: 218 PDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI 277

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M   R S D + Y+ +I +  K   + KA  ++ ++K  G  PD V +  +I+  GK
Sbjct: 278 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 337

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EA  + E+M +  V+P   ++S ++  Y +   F +A   ++ M       DL  
Sbjct: 338 AGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLA 397

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV-YGEAEL----------- 244
            ++M+DV+ + +M +    L+ +M   G+ P +  Y  ++RV Y ++ L           
Sbjct: 398 YSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMV 457

Query: 245 ------------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
                             + EA  + ++   + +   V T N ++  +  S +   A +L
Sbjct: 458 QSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDL 517

Query: 287 MQEMQNRGIEPNAITY-------------------------------------STIIAIW 309
           +  + +  IEP+   +                                       ++A +
Sbjct: 518 VHAVSS--IEPSVAAHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASY 575

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            +AG  D A   F  + + G+E+D  + QT ++ Y R G    A  LL +      + ++
Sbjct: 576 DRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEV-KD 634

Query: 370 TA--ITILARAGRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
           +A  + I+A  G++   + A  VFR     G   + S +  ++  ++    +       +
Sbjct: 635 SAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALD 694

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
            M +AG  P++     VL ++G+  + +   + Y  + E G   + +    +   +    
Sbjct: 695 NMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNG 754

Query: 485 DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +     S++ ++         ++   +  +Y R     DA  ++  + K
Sbjct: 755 NLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKK 803



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 186/405 (45%), Gaps = 5/405 (1%)

Query: 37   LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
            +AH L  +        D   +  +I  +GK  ++ +A    + +++   +G+   YS L+
Sbjct: 618  VAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALL 677

Query: 97   ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
                +  ++ +A      + ++G+ P+    N ++  FG+A   KE     + + E G+ 
Sbjct: 678  SAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGIT 737

Query: 157  PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
            P++ ++  + + +  N    EA S++ +M E      +     ++ +Y +  +  DA+ L
Sbjct: 738  PNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEEL 797

Query: 217  FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
               ++K G++  +  YN ++ +Y +   + +A  +F+ MQ      +  T+NT+I +Y +
Sbjct: 798  VKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSR 857

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            +   ++A  L++EM   G  PN  TY+T+I+ +G+    + A ++F+ +  +G + D   
Sbjct: 858  NQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATA 917

Query: 337  YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAF 392
            Y  MI  Y + G     + ++ +++     P  T I +L     + G   +A  V     
Sbjct: 918  YNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLP 977

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            + G   D   +  +I     NK Y + +    KM  A   P +H+
Sbjct: 978  EIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRP-THV 1021



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 180/387 (46%), Gaps = 11/387 (2%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P+   + V+     R    E A  ++ +MR+ G +P    +  L+  + +E +   A  
Sbjct: 737  TPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEE 796

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++ +++  +  D+ +Y+++I L  KL  Y KA  +F  ++  G  PD   +NT+I ++ 
Sbjct: 797  LVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYS 856

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            + ++ +EA+ L+ EM + G  P+  +Y+TL++ Y     + +A  VF  + E  C  D T
Sbjct: 857  RNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDAT 916

Query: 196  TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
              N+MI+VY +    +  + +   M+  G +PS+ + + L+  YG+    G+A  +   +
Sbjct: 917  AYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETL 976

Query: 256  QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                +  + + Y ++I  +  + ++  A   +++M +  + P  +T +  +       + 
Sbjct: 977  PEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERS 1036

Query: 316  DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
              A ML + L  +G  + P+   T         +V   + +  +L++      +  + +L
Sbjct: 1037 SHALMLLKALSEAGFSL-PLRLMTECTP----KVVQDMQDIFDQLQESGPEACQGVVNVL 1091

Query: 376  ARAGRIEEATWVFRQAFDAGEVKDISV 402
                   +  W FRQ   A  V  +++
Sbjct: 1092 M------DLLWAFRQCATAALVFAVAI 1112



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 146/294 (49%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A   P+    N VL    RA + +     +  + + GI P+  T+  +   F + G  + 
Sbjct: 699 AGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEE 758

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S  +QM +   S  + ++  L+ L  + +    A  +   +K +G+  D+  YN MI+
Sbjct: 759 ARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMIS 818

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           ++ K   +++A L+ + M+E G  PD  +++TL+ LY  N    EA ++  EM +     
Sbjct: 819 LYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP 878

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           +++T   +I  YG+L   +DA+ +F S+ + G  P   +YN ++ VY +A    +   + 
Sbjct: 879 NISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVI 938

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
             M+    E ++ T + ++  YGK     KA  +++ +   G+ P+AI Y++II
Sbjct: 939 EQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSII 992



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/541 (21%), Positives = 214/541 (39%), Gaps = 69/541 (12%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I +E  ++P    YN VL    R  + E    +   MR    + D  TY+T+I  +GK G
Sbjct: 245 IMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAG 304

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
           M   A     QM+++    D V ++ LI+   K    ++A ++F  +  S + P L A++
Sbjct: 305 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 364

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            MI  + KA +F +A      M   GV+PD ++YS +L+++ +     + + ++  M   
Sbjct: 365 AMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGS 424

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK-------------------------- 222
               +L+   IM+ V+ Q     + + L   M +                          
Sbjct: 425 GLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLK 484

Query: 223 ----MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
                G+   V + N +L  +  +    +A  L   +   E       Y  +  +  K+ 
Sbjct: 485 ISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLALMLAKAG 544

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
              +A   M+  Q  G    +     ++A + +AG  D A   F  + + G+E+D  + Q
Sbjct: 545 RFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQ 604

Query: 339 TMIVAYERVG--LVAH---------------------------------AKRLLHELRQ- 362
           T ++ Y R G   VAH                                 A+ +  +L++ 
Sbjct: 605 TAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRH 664

Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
               NT      ++  A  G  E AT        AG   + +    ++E F R  K   +
Sbjct: 665 GFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKEL 724

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
            E ++++   G  P+S    ++ +++ +    E A  +Y +M+E G   S QV   +L+L
Sbjct: 725 SEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLAL 784

Query: 480 Y 480
           Y
Sbjct: 785 Y 785



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/336 (19%), Positives = 157/336 (46%), Gaps = 4/336 (1%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I  YG+L + ++A+ +F  +++ G   +  +Y+ LL  Y E   F  A      M    
Sbjct: 641 IIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG 700

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           ++ N    N +++ +G++ + ++ +   Q +   GI PN+ T+  I   + + G L+ A 
Sbjct: 701 LQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEAR 760

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITIL 375
            +++++R +G      +++ ++  Y R  +   A+ L+ ++++     +       I++ 
Sbjct: 761 SMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLY 820

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
           ++ G   +A  VF+   + G   D + F  +I L+SRN+       +  +M   G  P+ 
Sbjct: 821 SKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNI 880

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                ++++YG+L+ +E A+ ++  + E GC      +  M+++Y    +   +E + E+
Sbjct: 881 STYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQ 940

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           + +D         H++   Y +      A  ++  +
Sbjct: 941 MKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETL 976



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 10/304 (3%)

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           +L V G A   G A  LF   +   I   V  YN+++ +Y +  +      L+  MQ+RG
Sbjct: 86  MLSVLGRANQPGLAQELFDRAE-SSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRG 144

Query: 295 IEPNAITYSTIIAIWGKAGKLDR-AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
             P+ +T++ +I    + G  +  A+ L Q + ++G+  D + Y T+I A      ++ A
Sbjct: 145 CRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDA 204

Query: 354 KRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             +  E+++    P+       I++  RAGR+E A+ +FR   + G   D   +  ++  
Sbjct: 205 ILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHA 264

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG-CVF 468
           F+R+ +   V  +   MR A    D      +++ YGK      A++LY +M+EEG C  
Sbjct: 265 FARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-- 322

Query: 469 SDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
            D V F +L    G     N   ++FE +         +    +   Y +A+  +DA   
Sbjct: 323 PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHT 382

Query: 528 MNRM 531
            + M
Sbjct: 383 YSCM 386



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 96/190 (50%), Gaps = 4/190 (2%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            +E   SP    +N ++    R +  + A  L  EM + G AP+  TY+TLI+ +G+   +
Sbjct: 837  QEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAY 896

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            + A    + + +     D   Y+ +I + RK  ++ K   +  ++K+ G  P L   + +
Sbjct: 897  EDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHML 956

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            ++ +GK     +A  ++E + E G+ PD + Y++++N ++ N  ++ A+    +M +  C
Sbjct: 957  MDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDA-C 1015

Query: 191  --PLDLT-TC 197
              P  +T TC
Sbjct: 1016 VRPTHVTITC 1025


>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
          Length = 1013

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 249/585 (42%), Gaps = 66/585 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EA  +P+ F Y VV+ +  +    E A   F EM++R   P+  TYS LI+   K G  +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +M+   +       ++++ L  K  DYSKA+S+FS ++ + IVPD V Y  ++
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387

Query: 132 NVFGKAKLFKEARLLIEE-----------------------------------MREQGVK 156
            ++GK  L+++A+ + EE                                   MR + VK
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P   SYS LL  +V       A   F  ++    P D+  CN ++ +Y +L     A  L
Sbjct: 448 PSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARAL 506

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV------TYNTM 270
              MRK  +        T+L V  +  +  +  +L  ++Q +     V+      T + M
Sbjct: 507 ILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMM 566

Query: 271 IKI-----------------YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           +K                  + +    ++A  L + +   G +P+    +T+I  +G+A 
Sbjct: 567 LKSLLDKPEGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQ 626

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRE 369
           +L++A  LF+   S+   +   +Y  M+ A  R G    A RL  EL       + +   
Sbjct: 627 QLEQAQKLFETA-STSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTIS 685

Query: 370 TAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             +T L +  + +EA   ++R   D  E+ D  V+   I+    + K  + + ++++M S
Sbjct: 686 ILVTHLTKQEKFQEAENIIYRCLHDEAEL-DTVVYNTFIKSMLESGKLYSAVSIYDRMIS 744

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +G         ++++ YG+  + E A +++S  QE G    ++ +  MLS YG     + 
Sbjct: 745 SGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHE 804

Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              LF R+  D     K   + +   Y  +   N+A  I   M K
Sbjct: 805 ASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQK 849



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/486 (21%), Positives = 212/486 (43%), Gaps = 44/486 (9%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV AY ++LR   +  + +LA   F EM Q G  PD     TL+  + + 
Sbjct: 159 WMKLQLCYEPSVVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARW 218

Query: 68  G----------------------MFDSAISWLQ-------------QMEQDRVSGDLVLY 92
           G                      +F+  +S LQ             QM +  V+ +   Y
Sbjct: 219 GKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTY 278

Query: 93  SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
           + +I    K     +A+  F  +K    VP+   Y+ +I++  K    +EA  L +EM+ 
Sbjct: 279 TVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKV 338

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           + + P   + +++L LY +N  + +ALS+F+EM +     D     I++ +YG+L + +D
Sbjct: 339 KSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYED 398

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
           A R+F  + K G+     +Y  + +V+   + +  A+ +   M+ + ++ +  +Y+ +++
Sbjct: 399 AQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLR 458

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +    + + A +  + + N G  P+    + ++ ++ + G LD+A  L  K+R   ++ 
Sbjct: 459 CHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQF 517

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           D  L  T++    +  +      L         I  E + + +         + + +   
Sbjct: 518 DEDLCVTVLEVCCKTSINKDTDNL------TEVIQNEGSSSKVLNPTDSSTLSMMLKSLL 571

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           D  E   +S    +I  F+R         ++E +   G  PD   IA ++  YG+ ++ E
Sbjct: 572 DKPE--GLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLE 629

Query: 453 TADDLY 458
            A  L+
Sbjct: 630 QAQKLF 635



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 46/374 (12%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++  + R  + E A+ LF E+  +G   D  T S L+T   K+  F  A + + +  
Sbjct: 649 YNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCL 708

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            D    D V+Y+  I+   +      A+SI+ R+ SSGI   +  +N MI+V+G      
Sbjct: 709 HDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYG------ 762

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
                                        +  K  +A+ +F+   E+  P+D  T   M+
Sbjct: 763 -----------------------------QGGKLEKAVEMFSAAQELGLPIDEKTYTNML 793

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             YG+     +A  LF  M++ GI P  +S+NT++  Y  + L  EA  +F+ MQ+    
Sbjct: 794 SFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHV 853

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  TY  +I+ Y +   + KA   +Q M    + P+   ++ +I+ + K G++D A  +
Sbjct: 854 PDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRM 913

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLV-------AHAKRLLHELRQPNTIPRETAITI 374
           + ++  +G+  D    +TM+  +   G V         A RLL    +P++     A  +
Sbjct: 914 YNQMEEAGIPADLACCRTMMRMHLDHGYVDDGILFFETACRLL----KPDSFILSAAFHL 969

Query: 375 LARAGRIEEATWVF 388
              +GR  EA  V 
Sbjct: 970 YEHSGRESEAGDVL 983



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 2/333 (0%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           L++ + + G  PD    +TLI  +G+    + A    +        G  V Y+ +++   
Sbjct: 599 LYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETASTSFPVGGSV-YNAMVDALC 657

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           +     +A  +F  L   G   D V  + ++    K + F+EA  +I        + DTV
Sbjct: 658 RCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTV 717

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+T +   +E+ K   A+S++  M     P  + T NIMI VYGQ    + A  +F + 
Sbjct: 718 VYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAA 777

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +++G+     +Y  +L  YG+A    EA  LF  M+   I    +++NTMI  Y  S  H
Sbjct: 778 QELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLH 837

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            +A  + QEMQ     P++ TY  +I  + +     +A    Q +  S +      +  +
Sbjct: 838 NEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHL 897

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           I A+ + G +  A+R+ +++ +   IP + A  
Sbjct: 898 ISAFLKEGQIDEAQRMYNQMEEAG-IPADLACC 929



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/580 (19%), Positives = 236/580 (40%), Gaps = 66/580 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS +    VL    + + +  A  LF EM Q  I PD   Y  L+  +GK G+++ A   
Sbjct: 343 PSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRM 402

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV--- 133
            +++++  +  D   Y  + ++   + +Y +A+ +   +++  + P   +Y+ ++     
Sbjct: 403 FEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVA 462

Query: 134 ----------------FGKAKLF---------------KEARLLIEEMREQGVKPDTVSY 162
                           +G   +F                +AR LI +MR++ ++ D    
Sbjct: 463 KEDVDAAEDTFRALSNYGPPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLC 522

Query: 163 STLLNLYV------ENHKFVEALSVFAEMNEVNCPLDLTTCNIMI----------DVYGQ 206
            T+L +        +     E +      ++V  P D +T ++M+              Q
Sbjct: 523 VTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPEGLSSVSQ 582

Query: 207 LDM-------AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           L M         +A  L+  + ++G  P   +  TL+  YG+A+   +A  LF       
Sbjct: 583 LIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQAQKLFETAS-TS 641

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
                  YN M+    +  + E+A  L  E+ ++G   +A+T S ++    K  K   A 
Sbjct: 642 FPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAE 701

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-----ITI 374
            +  +      E+D V+Y T I +    G +  A  +   +   + IPR        I++
Sbjct: 702 NIIYRCLHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMIS-SGIPRSMQTFNIMISV 760

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             + G++E+A  +F  A + G   D   +  M+  + +  K+     +F +M+  G  P 
Sbjct: 761 YGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPG 820

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
                 ++N+Y        A+ ++ EMQ+   V     +  ++  Y   K ++  E   +
Sbjct: 821 KISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQ 880

Query: 495 -RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             L S+   +    +H+++  + +  ++++A R+ N+M +
Sbjct: 881 MMLRSNMTPSCTHFNHLISA-FLKEGQIDEAQRMYNQMEE 919



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 5/346 (1%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           + +  M  V  + + +++AR     M+ Q   +P  V+Y+ LL LY +  K   A   F 
Sbjct: 135 LTFREMCFVLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGQVGKIKLAEVTFL 194

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM +  C  D   C  ++  Y +     D    + ++R+  I PS+  +N ++    + +
Sbjct: 195 EMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQK 254

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
           L G+ IHL+  M    +  N  TY  +I  Y K    E+A +   EM+ R   P   TYS
Sbjct: 255 LHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYS 314

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I++  K GK + A  L+ +++   +        +++  Y +    + A  L  E+ Q 
Sbjct: 315 LLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQN 374

Query: 364 NTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
             +P E    IL R     G  E+A  +F +   AG + D   +  M ++    + Y   
Sbjct: 375 KIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRA 434

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++V + MR+    P     + +L  +    + + A+D +  +   G
Sbjct: 435 LQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG 480



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 163/380 (42%), Gaps = 3/380 (0%)

Query: 89  LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           +V Y+ L+ L  ++     A   F  +  +G  PD VA  T++  + +     +  +   
Sbjct: 170 VVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYA 229

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            +R + + P    ++ +++   +     + + ++ +M E N   +  T  ++I  Y +  
Sbjct: 230 AVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEG 289

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
           M ++A   F  M++    P   +Y+ L+ +  +     EA+ L+  M+ K I  +  T  
Sbjct: 290 MLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCA 349

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           +++ +Y K+ ++ KA +L  EM+   I P+ + Y  ++ I+GK G  + A  +F+++  +
Sbjct: 350 SVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKA 409

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVF 388
           G+  D   Y  M   +  V     A ++L  +R  N  P + + + L R    +E     
Sbjct: 410 GLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAA 469

Query: 389 RQAFDA-GEVKDISVFGC--MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
              F A        VF C  ++ L+ R         +  KMR      D  +   VL   
Sbjct: 470 EDTFRALSNYGPPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVC 529

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    +  D+L   +Q EG
Sbjct: 530 CKTSINKDTDNLTEVIQNEG 549



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 134/279 (48%), Gaps = 10/279 (3%)

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E +VV Y  ++++YG+  + + A     EM   G EP+A+   T++  + + GKL+   M
Sbjct: 167 EPSVVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----A 376
            +  +R   +     ++  M+ + ++  L      L  ++ + N  P +   T++    A
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G +EEA   F +      V + + +  +I L +++ K    + ++++M+     P ++
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A VL  Y K  ++  A  L+SEM++   V  + ++  ++ +YG    +   + +FE +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 497 DSDSNINKKELHHVVAGI------YERANRLNDASRIMN 529
           D    ++ ++ +  +A +      Y+RA ++ DA R  N
Sbjct: 407 DKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARN 445



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 41/243 (16%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+  +N+++    +  + E A  +F   ++ G+  D  TY+ +++ +GK G         
Sbjct: 750 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAG--------- 800

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
                                      + +A  +FSR+K  GI P  +++NTMIN +  +
Sbjct: 801 --------------------------KHHEASLLFSRMKEDGIRPGKISFNTMINAYATS 834

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
            L  EA ++ +EM++    PD+ +Y  L+  Y E   + +A      M   N     T  
Sbjct: 835 GLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHF 894

Query: 198 NIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
           N +I  +   GQ+D   +A R++  M + GI   +    T++R++ +     + I  F  
Sbjct: 895 NHLISAFLKEGQID---EAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVDDGILFFET 951

Query: 255 MQR 257
             R
Sbjct: 952 ACR 954



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 115/242 (47%), Gaps = 4/242 (1%)

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EP+ + Y+ ++ ++G+ GK+  A + F ++  +G E D V   T++ AY R G +     
Sbjct: 167 EPSVVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLM 226

Query: 356 LLHELRQPNTIPRETAITILARAGRIEE----ATWVFRQAFDAGEVKDISVFGCMIELFS 411
               +R+ + +P  +    +  + + ++       ++ Q  +A    +   +  +I  ++
Sbjct: 227 FYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYA 286

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +       ++ F +M+   + P+    +L+++   K  + E A  LY EM+ +  V S+ 
Sbjct: 287 KEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNY 346

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +L+LY   +D++   SLF  ++ +  +  + ++ ++  IY +     DA R+   +
Sbjct: 347 TCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406

Query: 532 NK 533
           +K
Sbjct: 407 DK 408



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 1/170 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   ++N ++     +     A  +F EM++    PD +TY  LI  + +   +  A   
Sbjct: 819 PGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEA 878

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +Q M +  ++     +++LI    K     +A  ++++++ +GI  DL    TM+ +   
Sbjct: 879 IQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLD 938

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
                +  +L  E   + +KPD+   S   +LY  + +  EA  V   +N
Sbjct: 939 HGYVDDG-ILFFETACRLLKPDSFILSAAFHLYEHSGRESEAGDVLDAIN 987


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 243/516 (47%), Gaps = 77/516 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VFA NV++ ++ +  Q   A  L   +R R I+ D  TY+T+I+   + G+ D A  
Sbjct: 126 SPDVFALNVLIHSLCKVGQLSFAISL---LRNRVISVDTVTYNTVISGLCEHGLADEAYQ 182

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA------------------ISIFSRLKS 117
           +L +M +  +  D V ++ LI+   K+ ++++A                  IS +  L +
Sbjct: 183 FLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHA 242

Query: 118 ----------SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
                     SG  PD+V ++++IN   K     E  LL+ EM E GV P+ V+Y+TL++
Sbjct: 243 IEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVD 302

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +   +  AL+++++M     P+DL    +++    +    ++A++ F  + +    P
Sbjct: 303 SLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVP 362

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +VV+Y  L+    +A     A  +   M  K +  NVVTY++MI  Y K    E+A +LM
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLM 422

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
           ++M+++ + PN  TY T+I    KAGK + A+ + +++R  GVE +  +   ++   +R+
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRI 482

Query: 348 GLVAHAKRLLHEL----------------------------------RQPNTIPRETA-- 371
           G +   K L+ ++                                   Q   +P +    
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSY 542

Query: 372 ---ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I+ L + G++  A W ++   + G   DI+ F  M+    +   +  ++++++KM+S
Sbjct: 543 NVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKS 601

Query: 429 AGYFPD---SHIIALVLNSYGKLREFETADDLYSEM 461
            G  P     +I+  +L   GK++E   A D+  +M
Sbjct: 602 CGIKPSLMICNIVVGMLCEKGKMKE---AIDILDQM 634



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/456 (21%), Positives = 210/456 (46%), Gaps = 7/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  ++  + +A     A  +  +M ++ + P+  TYS++I  + K+GM + A+S 
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   V  +   Y  +I+   K      A  +   ++  G+  +    + ++N   +
Sbjct: 422 MRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKR 481

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KE + L+++M  +GV  D ++Y++L++++ +      ALS   EM E   P D+ +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVS 541

Query: 197 CNIMIDVYGQLDMAK-DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N++I   G L   K  AD  +  MR+ GI+P + ++N ++    +   F   + L+  M
Sbjct: 542 YNVLIS--GLLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKM 599

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   I+ +++  N ++ +  +  + ++A +++ +M    I PN  TY   + +  K  + 
Sbjct: 600 KSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRA 659

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D      + L S G+++   +Y T+I    ++G+   A  ++ ++     +P       L
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNAL 719

Query: 376 ARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                    + +A   +    +AG   +++ +  +I   S       V +   +M+S G 
Sbjct: 720 MHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGM 779

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD      +++   K+   + +  +Y EM  +G V
Sbjct: 780 RPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLV 815



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 200/446 (44%), Gaps = 35/446 (7%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           L+ + R K+     GL  +M  +G+  D   Y++LI  F K G  ++A+SW ++M++  +
Sbjct: 479 LKRIGRIKE---VKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEM 535

Query: 86  SGDLVLY----SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
             D+V Y    S L++  +  +D++     +  ++  GI PD+  +N M+N   K   F+
Sbjct: 536 PWDVVSYNVLISGLLKFGKVGADWA-----YKGMREKGIEPDIATFNIMMNSQRKQGDFE 590

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
               L ++M+  G+KP  +  + ++ +  E  K  EA+ +  +M  +    +LTT  I +
Sbjct: 591 GILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFL 650

Query: 202 DVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           D+  +    K AD +F +   +   GI  S   YNTL+    +  +  +A  +   M+ +
Sbjct: 651 DMSSK---HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEAR 707

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               + VT+N ++  Y       KA +    M   GI PN  TY+TII     AG +   
Sbjct: 708 GFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEV 767

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL--- 375
                +++S G+  D   Y  +I    ++G    +  +  E+     +P+ +   +L   
Sbjct: 768 EKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISE 827

Query: 376 -ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR---------NKKYANVIE---- 421
            A+ G++ +AT + ++        + S +  MI    +         NKK   + E    
Sbjct: 828 FAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGL 887

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGK 447
           + E +   GY P +  I  +  ++ K
Sbjct: 888 LKEMIEEKGYIPYNQTIYWISAAFSK 913



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 124/572 (21%), Positives = 240/572 (41%), Gaps = 56/572 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+   Y  ++ ++ +AK +  A  L+ +M  RGI  D   Y+ L+    K G  
Sbjct: 286 EEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDL 345

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A    + + +D    ++V Y+ L++   K  D S A  I +++    + P++V Y++M
Sbjct: 346 REAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSM 405

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN + K  + +EA  L+ +M +Q V P+  +Y T+++   +  K   A  +  EM  +  
Sbjct: 406 INGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGV 465

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +    + +++   ++   K+   L   M   G+    ++Y +L+ V+ +      A+ 
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALS 525

Query: 251 LFRLMQRKEIEQNVVTYNTMIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
               MQ KE+  +VV+YN +I     +GK      A    + M+ +GIEP+  T++ ++ 
Sbjct: 526 WAEEMQEKEMPWDVVSYNVLISGLLKFGKV----GADWAYKGMREKGIEPDIATFNIMMN 581

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              K G  +    L+ K++S G++   ++   ++      G +  A  +L ++      P
Sbjct: 582 SQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHP 641

Query: 364 N--------------------------------TIPRE---TAITILARAGRIEEATWVF 388
           N                                 + R+   T I  L + G   +A  V 
Sbjct: 642 NLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVM 701

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS---HIIALVLNSY 445
                 G V D   F  ++  +         +  +  M  AG  P+    + I   L+  
Sbjct: 702 EDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDA 761

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL--FERLDSDSNIN 503
           G ++E E      SEM+  G    D  +  ++S  G  K  N  ES+  +  + +D  + 
Sbjct: 762 GLIKEVE---KWLSEMKSRGMRPDDFTYNALIS--GQAKIGNKKESMTIYCEMIADGLVP 816

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
           K   ++V+   + +  ++  A+ +M  M KRR
Sbjct: 817 KTSTYNVLISEFAKVGKMLQATELMKEMGKRR 848



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 13/309 (4%)

Query: 7   DWINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           DW  +  R     P +  +N+++ +  +   +E    L+D+M+  GI P     + ++  
Sbjct: 558 DWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGM 617

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR---LKSSGI 120
             ++G    AI  L QM    +  +L  Y   ++++ K   + +A +IF     L S GI
Sbjct: 618 LCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSK---HKRADAIFKTHETLLSYGI 674

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
                 YNT+I    K  + ++A +++E+M  +G  PDTV+++ L++ Y       +ALS
Sbjct: 675 KLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALS 734

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
            ++ M E     ++ T N +I       + K+ ++    M+  G+ P   +YN L+   G
Sbjct: 735 TYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALIS--G 792

Query: 241 EAELFG--EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +A++    E++ ++  M    +     TYN +I  + K  +  +AT LM+EM  R + PN
Sbjct: 793 QAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPN 852

Query: 299 AITYSTIIA 307
             TY T+I+
Sbjct: 853 TSTYCTMIS 861



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 173/383 (45%), Gaps = 17/383 (4%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK-EARLLIEE 149
           L+  L  L         A    S + + G+VPDL  +N++I+ F    L   +  L+  +
Sbjct: 60  LFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSK 119

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M   GV PD  + + L++   +  +   A+S+    N V   +D  T N +I    +  +
Sbjct: 120 MIACGVSPDVFALNVLIHSLCKVGQLSFAISLLR--NRV-ISVDTVTYNTVISGLCEHGL 176

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           A +A +    M K+GI P  VS+NTL+  + +   F  A  L   +     E N++T+  
Sbjct: 177 ADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEIS----ELNLITHTI 232

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I  Y      E+A    ++M   G +P+ +T+S+II    K GK+    +L +++   G
Sbjct: 233 LISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMG 289

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-TILA----RAGRIEEA 384
           V  + V Y T++ +  +     HA  L  ++     IP +  + T+L     +AG + EA
Sbjct: 290 VYPNHVTYTTLVDSLFKAKDYRHALALYSQM-VVRGIPVDLVVYTVLMAGLFKAGDLREA 348

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
              F+   +  EV ++  +  +++   +    ++   +  +M     FP+    + ++N 
Sbjct: 349 EKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMING 408

Query: 445 YGKLREFETADDLYSEMQEEGCV 467
           Y K    E A  L  +M+++  V
Sbjct: 409 YVKKGMLEEAVSLMRKMEDQNVV 431



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 24/298 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  Y + L    + K+ +      + +   GI   R  Y+TLI    K GM   A   
Sbjct: 641 PNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMV 700

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ ME      D V ++ L+      S   KA+S +S +  +GI P++  YNT+I     
Sbjct: 701 MEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSD 760

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A L KE    + EM+ +G++PD  +Y+ L++   +     E+++++ EM         +T
Sbjct: 761 AGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTST 820

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I  + ++     A  L   M K  + P+  +Y T++              L +L  
Sbjct: 821 YNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMIS------------GLCKLCT 868

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAG 313
             E+E N            K++   +A  L++EM + +G  P   T   I A + K G
Sbjct: 869 HPEVEWN-----------KKAMYLAEAKGLLKEMIEEKGYIPYNQTIYWISAAFSKPG 915



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 7/326 (2%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL-FRLMQRKEIEQNVVTYNTMI 271
           A R   +M   G+ P +  +N+L+  +    L  + + L +  M    +  +V   N +I
Sbjct: 77  AARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLI 136

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
               K  +   A +L++   NR I  + +TY+T+I+   + G  D A     ++   G+ 
Sbjct: 137 HSLCKVGQLSFAISLLR---NRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGIL 193

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
            D V + T+I  + +VG  A AK L+ E+ + N I     I+       IEEA   +R  
Sbjct: 194 PDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEA---YRDM 250

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             +G   D+  F  +I    ++ K      +  +M   G +P+      +++S  K +++
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDY 310

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
             A  LYS+M   G      V+  +++      D    E  F+ L  D+ +     +  +
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTAL 370

Query: 512 AGIYERANRLNDASRIMNRMNKRRTF 537
                +A  L+ A  I+ +M ++  F
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVF 396


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 210/454 (46%), Gaps = 15/454 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  F +N +L +++++K +     L  +M  RGI P+ +  + LI CF + G+    I 
Sbjct: 83  TPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIH 142

Query: 76  WLQQMEQDRVS----GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                    V+     D V Y  LI    K+ +   A+ +  R+    +  + V YNT+I
Sbjct: 143 QAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVI 202

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K K   +A  L  EM  +G+ P+ V+YS L++ +    K  +A+ +F ++   N  
Sbjct: 203 YGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIK 262

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  T NI++D + +    K+   +F  M K GI P VV+YN+L+  Y   +    A  +
Sbjct: 263 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSI 322

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +  +  ++ +YN +I  + K  + +KA NL  EM  + I PN +TY+++I    K
Sbjct: 323 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 382

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +G++  A  L  ++   GV  + + Y ++I A  +   V  A  L+ + +     P    
Sbjct: 383 SGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYT 442

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            TIL     I+    V  + +D      ++ +  MI  F +   +   + +  KM+ +  
Sbjct: 443 YTIL-----IDGLCKV--EGYDI----TVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSC 491

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++    + + S     E + A+ L+ EM   G
Sbjct: 492 IPNAVTYEITIRSLLDNNENDKAEKLFREMITRG 525



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  Y+ ++       + + A  LF+++    I PD YT++ L+  F K+       +
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +  +  D+V Y++L++    + + + A SIF+ +   G+ PD+ +YN +IN F 
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 346

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K   +A  L  EM  + + P+ V+Y++L++   ++ +   AL +  +M++   P ++ 
Sbjct: 347 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 406

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID   +      A  L    +  GI PS+ +Y  L+   G  ++ G  I      
Sbjct: 407 TYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILID--GLCKVEGYDI------ 458

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                   V TYN MI  + K    ++A +L+ +M++    PNA+TY   I       + 
Sbjct: 459 -------TVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEN 511

Query: 316 DRAAMLFQKLRSSGV 330
           D+A  LF+++ + G+
Sbjct: 512 DKAEKLFREMITRGL 526



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 184/419 (43%), Gaps = 8/419 (1%)

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           +YS+  T F      D A+S   ++ +   +     ++ ++    K   Y   +S+  ++
Sbjct: 53  SYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM 112

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFK----EARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           +  GI P+L   N +I  F +  L      +A L  +++   G   D VSY TL++   +
Sbjct: 113 EFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK 172

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             +   AL +   ++     L+    N +I    +     DA  L+  M   GI P+VV+
Sbjct: 173 VGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVT 232

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y+ L+  +       +AI LF  +  + I+ +  T+N ++  + K  + ++   +   M 
Sbjct: 233 YSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMM 292

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +GI P+ +TY++++  +    +++ A  +F  +   GV  D   Y  +I  + ++  V 
Sbjct: 293 KQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 352

Query: 352 HAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A  L +E+   N IP      + I  L+++GRI  A  +  Q  D G   +I  +  +I
Sbjct: 353 KAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +   +  +    I +  K +  G  P  +   ++++   K+  ++   + Y+ M    C
Sbjct: 413 DALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFC 471



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/324 (19%), Positives = 142/324 (43%), Gaps = 14/324 (4%)

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           +SY++    +       +A+ LF  + R+        +N ++    KS  +    +L Q+
Sbjct: 52  ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111

Query: 290 MQNRGIEPNAITYSTIIAIWGKAG----KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           M+ RGI+PN    + +I  + + G    ++ +A +   KL + G  +D V Y T+I    
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171

Query: 346 RVGLVAHAKRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           +VG    A  LL     +L Q N +   T I  + +   + +A  ++ +    G   ++ 
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I  F    K  + I++F K+      PD +   ++++ + K R+ +    +++ M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
            ++G +     +  ++  Y   K+ N  +S+F  +           ++++   + +  ++
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351

Query: 522 NDASRIMNRMNKRR------TFNS 539
           + A  + N M+ +       T+NS
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNS 375


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 211/467 (45%), Gaps = 41/467 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF+YN V+R     K+ E A  L +EM+  G +    T+  LI  F K G  D A+ +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M+   +  DLV+Y++LI       +  +  ++F  +   G  P  + YNT+I  F K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  + E M E+GV+P+  +Y+ L++      K  EAL +   M E +   +  T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRK-------------MG------------------- 224
            NI+I+   +  +  DA  +   M+K             +G                   
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414

Query: 225 -----IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
                 DP V+SYN L+    +     +A+ ++ L+  K    + VT N ++    K+ +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             KA  L +++ +  I  N+ TY+ +I  + K G L+ A  L  K+R S ++     Y  
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAG 395
           ++ +  + G +  A RL  E+++ N  P   +  I+     +AG I+ A  +      AG
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
              D+  +  +I  F +       I  F+KM  +G+ PD+HI   VL
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 7/459 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L   ++ ++   A G+   M +RG A + Y ++ L+    +      A+S L++M ++ 
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  D+  Y+ +I    +  +  KA+ + + +K SG    LV +  +I+ F KA    EA 
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             ++EM+  G++ D V Y++L+  + +  +     ++F E+ E        T N +I  +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +L   K+A  +F  M + G+ P+V +Y  L+          EA+ L  LM  K+ E N 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA-MLFQ 323
           VTYN +I    K      A  +++ M+ R   P+ ITY+ ++      G LD A+ +L+ 
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 324 KLR-SSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
            L+ SS  + D + Y  +I    +   +  A      L+ +L   + +     +    +A
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G + +A  +++Q  D+  V++   +  MI+ F +         +  KMR +   P     
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +L+S  K    + A  L+ EMQ +   F D V F ++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIM 570



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 38/378 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R  A+ D + E    SP    YN ++R   +  Q + A  +F+ M +RG+ P+ YTY+ L
Sbjct: 265 RGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A+  L  M +     + V Y+ +I    K    + A+ I   +K    
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 121 VPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEA 178
            PD + YN ++  +  K  L + ++LL   +++     PD +SY+ L++   + ++  +A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 179 LSVFAEMNEVNCPLDLTTCNI-----------------------------------MIDV 203
           L ++  + E     D  T NI                                   MID 
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           + +  M   A  L   MR   + PSV  YN LL    +     +A  LF  MQR     +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VV++N MI    K+ + + A +L+  M   G+ P+  TYS +I  + K G LD A   F 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 324 KLRSSGVEIDPVLYQTMI 341
           K+  SG E D  +  +++
Sbjct: 624 KMVDSGFEPDAHICDSVL 641



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 183/430 (42%), Gaps = 6/430 (1%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S+ ++M +     + V  S L+E   ++     A  + + +   G   ++  +N ++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A  L+ EMR   + PD  SY+T++  + E  +  +AL +  EM    C  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L T  I+ID + +     +A      M+ MG++  +V Y +L+R + +         LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             +  +      +TYNT+I+ + K  + ++A+ + + M  RG+ PN  TY+ +I      
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A  L   +     E + V Y  +I    + GLVA A  ++  +++  T P     
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390

Query: 373 TI----LARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKM 426
            I    L   G ++EA+ +           D  V  +  +I    +  +    +++++ +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
                  D     ++LNS  K  +   A +L+ ++ +   V +   +  M+  +      
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510

Query: 487 NMLESLFERL 496
           N+ + L  ++
Sbjct: 511 NVAKGLLCKM 520



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 119/287 (41%), Gaps = 35/287 (12%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + + +   P V +YN ++  + +  +   A  ++D + ++  A DR T + L+    K G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             + A+   +Q+   ++  +   Y+ +I+   K    + A  +  +++ S + P +  YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +++   K     +A  L EEM+     PD VS+                          
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF-------------------------- 567

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                    NIMID   +    K A+ L   M + G+ P + +Y+ L+  + +     EA
Sbjct: 568 ---------NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           I  F  M     E +    ++++K      E +K T L++++ ++ I
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 201/409 (49%), Gaps = 5/409 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S S  A +VV+  + ++ + + A  L D+M + G++ +   Y++L+ C+ ++        
Sbjct: 174 SVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 233

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ ME + +   +  Y+ L++      D SK  ++F+ +K++ +V D+  Y  +IN + 
Sbjct: 234 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYC 293

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A   + A  +++E    GV+P+  +Y  L+N + +  +   A  + A+M      L+  
Sbjct: 294 RAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQI 353

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N MID Y +  M  DA ++  +M KMG++  + +YNTL           EA  L  +M
Sbjct: 354 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 413

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
               +  N VTY T+I I+ K  +  +A  L +EM  +G  P+ +TY+ +I  + K G +
Sbjct: 414 IEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSI 473

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
             A    +++   G   D   Y +++  +   G V  A +L  E++Q    PN +     
Sbjct: 474 REAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTAL 533

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI-ELFSRNKKYANV 419
           I+ LA+ GR E A  ++     AG + D S++  ++  L + N+K   V
Sbjct: 534 ISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKV 582



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/414 (21%), Positives = 180/414 (43%), Gaps = 9/414 (2%)

Query: 38  AHGLFDEMRQRGIAPDRYT---YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSN 94
           A GL +  R  G  P   +    S ++    K G  D A   L  M +  VS + + Y++
Sbjct: 160 AAGLLE--RALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNS 217

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           L++   +  D  +   I   +++ GI   +  Y  +++    A+   +   L  EM+   
Sbjct: 218 LLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANN 277

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           V  D   Y+ ++N Y        A  V  E        +  T  ++I+ + ++   + A+
Sbjct: 278 VVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAE 337

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   M+  G+  + + +NT++  Y    +  +A+ +   M++  +E ++ TYNT+    
Sbjct: 338 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGL 397

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            +    ++A  L+  M   G+ PN +TY+T+I+I  K G +  A  LF+++   G     
Sbjct: 398 CRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSV 457

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQ 390
           V Y  MI  Y + G +  A+R   E+ +   +P       L       G+++ A  +F +
Sbjct: 458 VTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEE 517

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
               G   ++  +  +I   ++  +     ++++ M  AG  PD  + + ++ S
Sbjct: 518 MKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGS 571



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 10/348 (2%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           +A + +++   K+    +AR L+++M   GV  + + Y++LL+ YV          +   
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGE 241
           M        + T  I++D    L  A+D  +   LF  M+   +   V  Y  ++  Y  
Sbjct: 238 MENEGIEATVGTYTILVD---SLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A  +        +E N  TY  +I  + K  + E A  L+ +MQ +G+  N I 
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQII 354

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T+I  + + G +D A  +   +   GVE+D   Y T+     RV  +  AK LLH + 
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414

Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           +    PN +   T I+I  + G + EA  +FR+  + G    +  +  MI+ +++     
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                 ++M   G+ PD +  A +++ +    + + A  L+ EM++ G
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 522


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 3/381 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  R + +  AYN ++   ++A   + A  ++  M Q G+ PD YT++ L+  F K    
Sbjct: 81  EGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRV 140

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           DS     ++M+    S +++ YS LI+   K     KA+ +F  +KS G  P++  Y +M
Sbjct: 141 DSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSM 200

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+  GK+    +A  L EEM  +G+    V Y++L++    + +   A  +F EM     
Sbjct: 201 IDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGL 260

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T   ++   G    A +A R+F   R +G    V  YN L+    +++   EA  
Sbjct: 261 QPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWE 320

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  ++   +  +V T+N ++    KS     A  L+ +M+  G  P+   Y+T+I    
Sbjct: 321 IFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLR 380

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIP 367
           K+G+++ A  L  +++S G E D V Y T+I    + G +  A RL  E+      NT+ 
Sbjct: 381 KSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVT 440

Query: 368 RETAITILARAGRIEEATWVF 388
             T +  L  AGR++EA  +F
Sbjct: 441 YNTILNGLCMAGRVDEAYKLF 461



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 202/428 (47%), Gaps = 9/428 (2%)

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           +   G+ + ++  L++ME  R +     Y++LI+   K     KA++++  +  SG+ PD
Sbjct: 64  YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
              +N ++N F KAK       L EEM+ Q   P+ ++YS L++   +     +AL VF 
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           +M    C  ++ T   MID  G+      A  LF  M   G+  + V YN+L+   G + 
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
               A  LFR M  K ++ + VT+ +++   G +    +A  + QE ++ G   +   Y+
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I    K+ +LD A  +F +L   G+  D   +  ++    + G +  A  LL ++++ 
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363

Query: 364 NTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
              P      T I  L ++GR+EEA  +  +    G   D+  +  +I+   +  +  + 
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDA 423

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE---GCVFSDQVHFQM 476
           + +FE++ + G F ++     +LN        + A  L++ M++E   G +  D V +  
Sbjct: 424 LRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTT 482

Query: 477 LSLYGARK 484
           L L GAR+
Sbjct: 483 L-LNGARQ 489



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 5/301 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++F Y  ++  + ++   + A  LF+EM   G+   R  Y++LI   G+ G  D+A   
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M    +  D V +++L+         S+A  IF   +  G   D+  YN +I+   K
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +K   EA  +  E+ E G+ PD  +++ L++   ++ +  +A  +  +M    C  D+T 
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID   +    ++A +L   M+ +G +P VV+YNTL+    +     +A+ LF  + 
Sbjct: 372 YNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEIS 431

Query: 257 RKEIEQNVVTYNTMIK---IYGKSLEHEKATNLM-QEMQNRGIEPNAITYSTIIAIWGKA 312
            K    N VTYNT++    + G+  E  K  N M QE  +  I+P+ +TY+T++    +A
Sbjct: 432 AKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQA 490

Query: 313 G 313
           G
Sbjct: 491 G 491



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/303 (19%), Positives = 127/303 (41%), Gaps = 31/303 (10%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +YN+L+  + +A    +A+ ++R+M +  +  +  T+N ++  + K+   +    L +EM
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           QN+   PN ITYS +I    K G +++A  +F  ++S G                     
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC-------------------- 190

Query: 351 AHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
                      +PN     + I  L ++G +++A ++F +    G V    V+  +I   
Sbjct: 191 -----------RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R+ +     ++F +M S G  PD      ++   G       A  ++ E ++ GC    
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 471 QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            ++  ++      K  +    +F  L+ D  +      + +     ++ R++DA  ++  
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 531 MNK 533
           M +
Sbjct: 360 MKR 362


>gi|363543445|ref|NP_001241732.1| salt-inducible protein [Zea mays]
 gi|195610062|gb|ACG26861.1| salt-inducible protein [Zea mays]
          Length = 716

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+       +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 167 KSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYS 226

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   F  A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 227 TLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARG 286

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 287 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 346

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM +     +  T   +  +YG+    +DA +L+  MR++ +    +  NTLL 
Sbjct: 347 ARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLS 406

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L  EA  LF  M+  E     + +  +Y  MI IYG + + + A  L  EM   
Sbjct: 407 MCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEMLKG 466

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKA ++ +A  + +     G++ D
Sbjct: 467 GIEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLEKGLKPD 506



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+ + L++  +G  P D + +N  +     A+ +  A  L  +M + GV  D ++
Sbjct: 165 WRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNIT 224

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 225 YSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRA 284

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 285 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 344

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM ++G+EPNA T + +  I+G+A     A  L+ K+R   +  D +L  T+
Sbjct: 345 GLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTL 404

Query: 341 IVAYERVGLVAHAKRLLHELRQPNT--IPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLVA A++L +E++ P    +P+         I I    G  + A  +F +  
Sbjct: 405 LSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML 464

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
             G   +I  +  +I+   +  +    +EV E     G  PD  +   +L+
Sbjct: 465 KGGIEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 10/239 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM  +G+ P+  T + L   +G+     
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGR 380

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+    +M + ++  D +L + L+ +   +   ++A  +F+ +K         PD  +Y
Sbjct: 381 DALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSY 440

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G       A  L  EM + G++P+ +SY+ ++    + H+  +A+ V     E
Sbjct: 441 TAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLE 500

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                D   C  ++ V   L   ++ + +  S+ K  ++ ++V    L+RV G+A++ G
Sbjct: 501 KGLKPDDRLCGCLLSVIA-LSSGEEMEMVLSSLEK--VNQNLVK---LIRVLGDAQVGG 553



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/354 (19%), Positives = 145/354 (40%), Gaps = 37/354 (10%)

Query: 149 EMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           + + QG  P       LLN L+    K +  L+    +     PLD    N+ +      
Sbjct: 141 QQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAA 200

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVT 266
                A+RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VT
Sbjct: 201 RQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVT 260

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y+ ++ +Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R
Sbjct: 261 YSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMR 320

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
             G++ +  +Y  ++ A  + G    A+ L  E+      P    +T LA+         
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAK--------- 371

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
                                 ++ R +   + +++++KMR      DS +   +L+   
Sbjct: 372 ----------------------IYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCA 409

Query: 447 KLREFETADDLYSEMQEEGC---VFSDQVHFQ-MLSLYGARKDFNMLESLFERL 496
            +     A+ L++EM++  C      D+  +  M+++YG+  D +    LF  +
Sbjct: 410 DVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEM 463



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 102/227 (44%), Gaps = 7/227 (3%)

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILAR 377
            + L +    +D + +   + +        HA+RL  ++       + I   T IT   R
Sbjct: 175 LRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARR 234

Query: 378 AGRIEEATWVFRQAFDA-GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             +  +A   F + + A G + D   +  +++++++      V+ +F++ R +G+ PD  
Sbjct: 235 CRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHV 294

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A++   +G+  +++    ++ EM+E G   +  V+  +L   G      +  +LFE +
Sbjct: 295 AFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM 354

Query: 497 -DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            D     N + L   +A IY RA    DA ++ ++M + +    S++
Sbjct: 355 IDQGVEPNARTL-TALAKIYGRARWGRDALQLWDKMRELKLPADSIL 400


>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
 gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
          Length = 999

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 237/514 (46%), Gaps = 35/514 (6%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R+ P    Y++++    R  + E A  LF+EM+ +GI P  YT ++L+  + K   + 
Sbjct: 307 QCRFVPEEATYSLLISASSRHGKGEQALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYS 366

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+S L +ME  +V  D V+Y  LI +  KL  Y +A   F +++ +G++ D   Y  M 
Sbjct: 367 KALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMA 426

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            V   A  +  A  ++E M  + VKP   SYS +L  YV     V A   F  +++   P
Sbjct: 427 QVHLNAGDYDRALEVLESMMMRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGLP 486

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMR----KMGIDPSVVSYNTLLRVYGEAELFGE 247
            D+  CN ++ +Y +L   + A  L   MR    ++  D S+    T+++ Y ++ +  +
Sbjct: 487 -DVFCCNDLLRLYMRLGHLEKARALVLKMREDDFRLDEDLSM----TVMKFYCKSNMIND 541

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR----GIEPNAITY- 302
           A  +F+ +QR      + T   +I++Y ++    K++ +++E  +     G + +A +  
Sbjct: 542 AEKIFKDIQRNNKTVKIPTMLLLIEMYARN----KSSVILREHSSSKALDGTDSSAASVA 597

Query: 303 --------------STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
                         S +I+   + G  D A  ++ +L   G + D     T++V Y +  
Sbjct: 598 LKSLLDMPGGLSSVSLLISKLAREGSTDEAKFIYDQLTELGFKPDHTAIATLVVQYGQGK 657

Query: 349 LVAHAKRLLHE---LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
            +  A+ L      L           +    + G+ E+A  +F +  D G  +D      
Sbjct: 658 QLEQAQELFESASALFPEGANVYNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSI 717

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           ++   +++ K  + I ++++M S+G         L+++ +GK  + + A ++++  QE G
Sbjct: 718 LVTHLTKHGKLHSAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELG 777

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
               ++++  MLSLYG          +F+R+  D
Sbjct: 778 LPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKED 811



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 198/411 (48%), Gaps = 5/411 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+  +  Y PSV AY ++LR   +  + +LA   F EM Q G  PD     TL+  + + 
Sbjct: 163 WMKLQLCYEPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARW 222

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G     + +   + +  +   + +Y+ +I   +K   + K I ++ +++ +G +P+   Y
Sbjct: 223 GRHKDMMLFYSAVRRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMREAGALPNQFTY 282

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I+ F K  L ++A  +  EMR+    P+  +YS L++    + K  +AL +F EM  
Sbjct: 283 TVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEMKA 342

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                   TC  ++ +Y + +    A  L   M    + P  V Y  L+R+YG+  L+ E
Sbjct: 343 QGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEE 402

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A   F  +++  +  +  TY  M +++  + ++++A  +++ M  R ++P+  +YS I+ 
Sbjct: 403 AEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMRNVKPSHFSYSAILR 462

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TI 366
            +     +  A   F+ L   G+  D      ++  Y R+G +  A+ L+ ++R+ +  +
Sbjct: 463 CYVAKEDIVAAEDTFRALSQHGLP-DVFCCNDLLRLYMRLGHLEKARALVLKMREDDFRL 521

Query: 367 PRETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
             + ++T++    ++  I +A  +F+      +   I     +IE+++RNK
Sbjct: 522 DEDLSMTVMKFYCKSNMINDAEKIFKDIQRNNKTVKIPTMLLLIEMYARNK 572



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 13/315 (4%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN ++    +  + E A+ LF EM  +G   D  T S L+T   K G   SAIS   +M 
Sbjct: 680 YNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTKHGKLHSAISIYDRMI 739

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
               S  +  ++ +I +  K     KA+ +F+  +  G+  D   Y  M++++GKA   +
Sbjct: 740 SSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQ 799

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA L+ + M+E G++P  +S+++++N Y  +    EA S F EM +     D  +   +I
Sbjct: 800 EASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQDCGHAPDSFSYLALI 859

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             Y +  +  +A+     M      PS   ++ L+  + +    GEA  ++  M+   + 
Sbjct: 860 RAYTEAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEAQRIYNQMKEASVA 919

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEM-----QNRG-IEPNAITYSTIIAIWGKAGKL 315
            ++    TM+++Y   +EH     LM E        RG ++P++   S    ++  AG+ 
Sbjct: 920 PDLACCRTMMRVY---MEH----GLMDEGITLYETTRGSLKPDSFILSAAFHLYDHAGRE 972

Query: 316 DRAAMLFQKLRSSGV 330
             A  +   +  SG 
Sbjct: 973 SEAQDVLDAISVSGT 987



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 3/311 (0%)

Query: 58  STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           S LI+   +EG  D A     Q+ +     D    + L+    +     +A  +F    +
Sbjct: 612 SLLISKLAREGSTDEAKFIYDQLTELGFKPDHTAIATLVVQYGQGKQLEQAQELFE--SA 669

Query: 118 SGIVPDLV-AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S + P+    YN M++ F K    ++A  L  EM +QG   D V+ S L+    ++ K  
Sbjct: 670 SALFPEGANVYNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTKHGKLH 729

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            A+S++  M        + T N+MI V+G+      A  +F + +++G+      Y  +L
Sbjct: 730 SAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNML 789

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
            +YG+A    EA  +F+ M+   I    +++N+MI  Y  S    +A +   EMQ+ G  
Sbjct: 790 SLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQDCGHA 849

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           P++ +Y  +I  + +A     A    + + +S        +  +I A+ + G +  A+R+
Sbjct: 850 PDSFSYLALIRAYTEAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEAQRI 909

Query: 357 LHELRQPNTIP 367
            +++++ +  P
Sbjct: 910 YNQMKEASVAP 920



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/574 (18%), Positives = 224/574 (39%), Gaps = 85/574 (14%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E ++  P    Y +++R   +   +E A   F+++ + G+  D  TY  +       G +
Sbjct: 376 ENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDY 435

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+  L+ M    V      YS ++       D   A   F  L   G+ PD+   N +
Sbjct: 436 DRALEVLESMMMRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGL-PDVFCCNDL 494

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           + ++ +    ++AR L+ +MRE   + D     T++  Y +++   +A  +F ++   N 
Sbjct: 495 LRLYMRLGHLEKARALVLKMREDDFRLDEDLSMTVMKFYCKSNMINDAEKIFKDIQRNNK 554

Query: 191 PLDLTTCNIMIDVYGQ-------------------------------LDM---------- 209
            + + T  ++I++Y +                               LDM          
Sbjct: 555 TVKIPTMLLLIEMYARNKSSVILREHSSSKALDGTDSSAASVALKSLLDMPGGLSSVSLL 614

Query: 210 ---------AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
                      +A  ++  + ++G  P   +  TL+  YG+ +   +A  LF        
Sbjct: 615 ISKLAREGSTDEAKFIYDQLTELGFKPDHTAIATLVVQYGQGKQLEQAQELFE-SASALF 673

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
            +    YN M+  + K  + E A +L  EM ++G   +A+T S ++    K GKL  A  
Sbjct: 674 PEGANVYNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTKHGKLHSAIS 733

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           ++ ++ SSG       +  MI                               ++  + G+
Sbjct: 734 IYDRMISSGTSQSMQTFNLMI-------------------------------SVFGKGGK 762

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           +++A  +F  A + G   D  ++  M+ L+ +  ++     +F++M+  G  P       
Sbjct: 763 LDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNS 822

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSD 499
           ++N+Y        A   + EMQ+ G       +  ++  Y   K +    E++   L+S 
Sbjct: 823 MINAYATSGLCSEAKSTFHEMQDCGHAPDSFSYLALIRAYTEAKLYMEAEEAIRMMLNSS 882

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +  +     H++   + +  ++ +A RI N+M +
Sbjct: 883 TTPSCPHFSHLIFA-FLKEGQIGEAQRIYNQMKE 915



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 137/290 (47%), Gaps = 8/290 (2%)

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           D   W   ++  +PSVV+Y  LLR+YG+      A   F  M +   E + V   T++ +
Sbjct: 159 DFFAWMKLQLCYEPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCM 218

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y +   H+        ++ R + P    Y+ +I+   K     +   +++++R +G   +
Sbjct: 219 YARWGRHKDMMLFYSAVRRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMREAGALPN 278

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFR 389
              Y  +I ++ +  L+  A  +  E+RQ   +P E   ++L    +R G+ E+A  +F 
Sbjct: 279 QFTYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFE 338

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +    G V        ++ L+ +N+ Y+  + +  +M ++   PD  I  +++  YGKL 
Sbjct: 339 EMKAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLG 398

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN----MLESLFER 495
            +E A+  + ++++ G +  +Q +  M  ++    D++    +LES+  R
Sbjct: 399 LYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMR 448



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 130/269 (48%), Gaps = 12/269 (4%)

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E +VV Y  ++++YGK  + + A     EM   G EP+A+   T++ ++ + G+     +
Sbjct: 171 EPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRHKDMML 230

Query: 321 LFQKLRSSGVEIDPV-LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL---- 375
            +  +R   + + PV +Y  MI + ++  L      +  ++R+   +P +   T++    
Sbjct: 231 FYSAVRRRDL-VPPVSVYNYMISSLQKQKLHGKVIHVWKQMREAGALPNQFTYTVVISSF 289

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +   +E+A  VF +      V + + +  +I   SR+ K    + +FE+M++ G  P +
Sbjct: 290 VKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEMKAQGIVPSN 349

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
           +  A +L  Y K  ++  A  L SEM+    +  + ++  ++ +YG    +   E  FE+
Sbjct: 350 YTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEK 409

Query: 496 LDSDSNINKKELH------HVVAGIYERA 518
           ++    ++ ++ +      H+ AG Y+RA
Sbjct: 410 IEKAGLLSDEQTYVAMAQVHLNAGDYDRA 438



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 114/242 (47%), Gaps = 4/242 (1%)

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           EP+ + Y+ ++ ++GK GK+  A   F ++   G E D V   T++  Y R G       
Sbjct: 171 EPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRHKDMML 230

Query: 356 LLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
               +R+ + +P  +     I+ L +     +   V++Q  +AG + +   +  +I  F 
Sbjct: 231 FYSAVRRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMREAGALPNQFTYTVVISSFV 290

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           +       ++VF +MR   + P+    +L++++  +  + E A  L+ EM+ +G V S+ 
Sbjct: 291 KEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEMKAQGIVPSNY 350

Query: 472 VHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               +L+LY   +D++   SL   +++   I  + ++ ++  IY +     +A +   ++
Sbjct: 351 TCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKI 410

Query: 532 NK 533
            K
Sbjct: 411 EK 412



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 63/172 (36%), Gaps = 36/172 (20%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++  ++P  F+Y  ++R    AK +  A      M      P    +S LI  F KEG  
Sbjct: 844 QDCGHAPDSFSYLALIRAYTEAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEG-- 901

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                  Q  E  R+                          ++++K + + PDL    TM
Sbjct: 902 -------QIGEAQRI--------------------------YNQMKEASVAPDLACCRTM 928

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + V+ +  L  E   L E  R   +KPD+   S   +LY    +  EA  V 
Sbjct: 929 MRVYMEHGLMDEGITLYETTR-GSLKPDSFILSAAFHLYDHAGRESEAQDVL 979


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VFAYN ++    +  + + A  + D MR +  +PD  TY+ +I      G  D A+  
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L Q+  D     ++ Y+ LIE         +A+ +   + S G+ PD+  YNT+I    K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +   A  ++  +  +G +PD +SY+ LL   +   K+ E   +  +M    C  ++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            +I+I    +    ++A  L   M++ G+ P   SY+ L+  +        AI     M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKL 315
                 ++V YNT++    K+ + ++A  +  ++   G  PN+ +Y+T+  A+W    K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
            RA  +  ++ S+G++ D + Y +MI    R G+V  A  LL ++R     P+ +     
Sbjct: 456 -RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           +    +A RIE+A  V       G   + + +  +IE
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 209/485 (43%), Gaps = 43/485 (8%)

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           + G +  ++  L+ M +   + D++L + LI+    L +  KA+ +   L+  G  PD+ 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           AYN +IN F K     +A  +++ MR +   PDTV+Y+ ++       K   AL V  ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 186 NEVNCPLDLTTCNIMID---VYGQLD---------------------------MAKDA-- 213
              NC   + T  I+I+   + G +D                           M K+   
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 214 DRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           DR F  +R +   G +P V+SYN LLR       + E   L   M  ++ + NVVTY+ +
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I    +  + E+A NL++ M+ +G+ P+A +Y  +IA + + G+LD A    + + S G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
             D V Y T++    + G    A  +  +L +    PN+    T  + L  +G    A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           +  +    G   D   +  MI    R        E+   MRS  + P      +VL  + 
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVH---FQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           K    E A ++   M   GC  ++  +    + +   G R +   L +   R+D+ S  +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYS 579

Query: 504 KKELH 508
            K LH
Sbjct: 580 FKRLH 584



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 164/350 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +     + A  L DEM  RG+ PD +TY+T+I    KEGM D A   
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           ++ +E      D++ Y+ L+        + +   + +++ S    P++V Y+ +I    +
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EA  L++ M+E+G+ PD  SY  L+  +    +   A+     M    C  D+  
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  + ++G  P+  SYNT+      +     A+H+   M 
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I+ + +TYN+MI    +    ++A  L+ +M++    P+ +TY+ ++  + KA +++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
            A  + + +  +G   +   Y  +I      G  A A  L ++L + + I
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 35/227 (15%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+V  Y++++  + R  + E A  L   M+++G+ PD Y+Y  LI  F +EG  D A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK----------------- 116
           I +L+ M  D    D+V Y+ ++    K     +A+ IF +L                  
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 117 ------------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
                             S+GI PD + YN+MI+   +  +  EA  L+ +MR     P 
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            V+Y+ +L  + + H+  +A++V   M    C  + TT  ++I+  G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 236/537 (43%), Gaps = 5/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+++ LD +++       +FAY+ +L ++ R          +  M   G+ P+   Y+ +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G    A + ++++ +  +S D   Y+++I    +  D   A+ +F+++   G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+ V Y+T+IN    +    EA  LI EM   G+ P   + +  +    +   + +A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M    C  ++ T   +I       + K A  LF  M + G+ P+ V+YN L+ +  
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E      A  +  LM R     N+VTYN MIK Y    + +KA  +M  M  RG   N +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII  +  +G    A  +   +R  G + D   Y  +I  + ++  +  A  L +E+
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 361 RQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P E   T L     +  +++ AT +      +G   ++  +  +I   ++   +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
           +   E+ + M   G FP+      +++   K      A +++++M E+GC+ +   +  +
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +   G        E+LF  L+    I  +  +  +   Y  + ++  A   + RM K
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 200/459 (43%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP  F Y  ++    R    + A  +F++M + G  P+  TYSTLI      G  +
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +++M    +       +  I     +  Y  A  +F  +K+ G  P++  Y  +I
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    + + K A  L   M   GV P+TV+Y+ L+N+ VEN +   A  V   M    C 
Sbjct: 363 SGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N MI  Y  L   K A  +  +M + G   ++V+YNT+++ Y ++     A+ +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM+    + +  +Y  +I  + K  + E A  L  EM + G+ PN +TY+ +I  + K
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER----VGLVAHAKRLLHELRQPNTIP 367
             KLD A  L + ++ SG   +   Y  +I    +     G     K ++ E   PN + 
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G    A  +F +  + G + ++  +  +I    +  K      +F ++ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G  PD      ++ +Y    + E A +    M + GC
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 214/489 (43%), Gaps = 36/489 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ Y  ++  +  +   ++A GLF  M + G+ P+  TY+ LI    +      A   
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M ++  S ++V Y+ +I+    L D  KA+ + + +   G   +LV YNT+I  +  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLT 195
           +     A  +++ MR+ G KPD  SY+ L+  + +  K   A  +F EM ++  CP ++T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
               +ID Y + +    A  L   M++ G  P+V +YN L+    +   F  A  L ++M
Sbjct: 533 Y-TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + I  NVVTY  MI    K+     A  +  +M  +G  PN +TYS++I   G+ GK+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           + A  LF +L   G+  D + Y  MI AY   G V HA   L  + +    P      +L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711

Query: 376 ARAGR----------------IEEATWVFRQAFDAGEVK-------------DISVFGCM 406
            +  +                +   ++ + Q  D   V               + V   +
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGY-QTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +   S   ++    E+   M S G  PD      +L S  ++R  + A  ++  M  +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830

Query: 467 VFSDQVHFQ 475
               +VH  
Sbjct: 831 ----EVHLN 835



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 202/455 (44%), Gaps = 41/455 (9%)

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +C  KE M  + +S+L  + Q  +   L  YS L+    +L   +  +  + R+ S G+ 
Sbjct: 154 SCHSKEAMART-MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 212

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+L+ YN +IN   K     +A  +++++ E  + PDT +Y++++  +   H    AL V
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 182 FAEMNEVNCPLDLTTCNIMID-------------------VYGQLDMA------------ 210
           F +M +  C  +  T + +I+                   ++G L  A            
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 211 ----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               +DA RLF  M+  G +P+V +Y  L+     + +   AI LF  M R  +  N VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN +I I  ++   + A  ++  M   G  PN +TY+ +I  +   G   +A ++   + 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIE 382
             G   + V Y T+I  Y   G    A R+L  +R     P E + T L     +  ++E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  +F +  D G   +   +  +I+ + +++K      + E M+ +G  P+     +++
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   K   F  A++L   M EEG +F + V +  +
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTAM 606



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN +++        + A  + + M QRG + +  TY+T+I  +   G   SA+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  M       D   Y+ LI    K+S    A  +F+ +   G+ P+ V Y  +I+ + 
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +    A  L+E M+  G +P+  +Y+ L++   + + F  A  +   M E     ++ 
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   MID   +      A  +F  M + G  P++++Y++L+R  G+     EA +LF  +
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +R  +  + +TY  MI+ Y  S + E A N +  M   G +P   TY  +I
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 122/258 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S ++  YN +++    +     A  + D MR  G  PD ++Y+ LI  F K    +SA 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M  D +  + V Y+ LI+   K      A S+   +K SG  P++  YN +I+  
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F  A  L + M E+G+ P+ V+Y+ +++   +N     AL +F +M E  C  +L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I   GQ    ++A+ LF  + + G+ P  ++Y  ++  Y  +     A +    
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 255 MQRKEIEQNVVTYNTMIK 272
           M +   +  + TY  +IK
Sbjct: 696 MIKAGCQPTLWTYGVLIK 713



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 68/436 (15%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           ILD +  +    P  ++Y  ++    +  + E A GLF+EM   G+ P+  TY+ LI  +
Sbjct: 482 ILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K+   D+A S L+ M++     ++  Y+ LI    K +++S A  +   +   GI P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V Y  MI+   K      A  +  +M EQG  P+ ++YS+L+    +  K  EA ++FAE
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +       D  T   MI+ Y      + A      M K G  P++ +Y  L++      L
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 245 FGEAIHLFRLMQRKEIEQN----------------------------VVTYNTMIKIYGK 276
             +     RL    ++  N                            V   N ++     
Sbjct: 721 LADQ----RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI---- 332
           +    +A  L+  M ++G+ P+   Y++++    +   +D A  +F+ + + G E+    
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 333 -------------------------------DPVLYQTMIVAYERVGLVAHAKRLLHELR 361
                                          D V+   +I    R G        LH + 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 362 QPNTIPRETAITILAR 377
               +P     TILAR
Sbjct: 897 TRRYMPSFHIYTILAR 912


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 199/430 (46%), Gaps = 4/430 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+   +V+ ++    + + A     ++ + G  PD  T++TLI     EG    A+  
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M  +    ++V Y  LI    K    ++A +IFS + + GI P++V YN++I+   K
Sbjct: 138 FDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +K    L+ EM +  + PD  + +T+++   +     EA  V   M       ++ T
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D +   +    A ++F +M       +V+SYNTL+  Y + +   +A++LF  M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           R+E+  N VTYNT+I         + A +L  EM  RG  P+ +TY T+     K   LD
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
           +A  L + +  S  + D  +Y T++    R G +  A+ L   L     QPN       I
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L + G + EA+ +F +    G   +   +  +   F RN +    IE+ E+M + G+ 
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497

Query: 433 PDSHIIALVL 442
            D     L++
Sbjct: 498 VDVSTTTLLV 507



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 203/453 (44%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +N +L ++ + K       L  +M   GI PD YT + +I         D A S 
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P++V Y T+IN   K
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +   EA  +  EM  +G+ P+ V+Y++L++   +  ++    ++  EM +     D+ T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +  M  +A  +   M   G++P+VV+YN L+  +        A+ +F  M 
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K+   NV++YNT+I  Y K    +KA  L +EM  + + PN +TY+T+I      G+L 
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAI 372
            A  LF ++ + G   D V Y+T+     +   +  A  LL  +   N  P      T +
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             + RAG +E+A  +F      G   ++  +  MI    +    A   ++F +M   G  
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           P+     L+   + +  E     +L  EM   G
Sbjct: 463 PNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 194/433 (44%), Gaps = 4/433 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M  +   P    ++ L+T   K     + +S  +QM+   +  D+   + +I     
Sbjct: 33  FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 92

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+    A S  +++   G  PD   + T+I          EA  L ++M  +G +P+ V+
Sbjct: 93  LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 152

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   ++ +  EA ++F+EM       ++ T N +I    +L   K    L   M 
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
              I P V + NT++    +  +  EA  +  +M  + +E NVVTYN ++  +    E +
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  +   M ++    N I+Y+T+I  + K   +D+A  LF+++    +  + V Y T+I
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 342 VAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
                VG +  A  L HE+    + P+ +   T    L +   +++A  + +    +   
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            DI ++  +++   R  +  +  ++F  + S G  P+     ++++   K      A  L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 458 YSEMQEEGCVFSD 470
           +SEM + GC  +D
Sbjct: 453 FSEMNKNGCSPND 465



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 187/403 (46%), Gaps = 10/403 (2%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            D A+S   +M   +     V ++ L+    K   +S  +S+  ++ S GI PD+     
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN          A   + ++ + G +PD  +++TL+       K  EAL +F +M    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ T   +I+   +     +A  +F  M   GI P++V+YN+L  ++G  +L  E  
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL--IHGLCKLC-EWK 202

Query: 250 HLFRLMQR---KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           H+  LM      +I  +V T NT++    K     +A +++  M +RG+EPN +TY+ ++
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-RQ--- 362
                  ++D A  +F  +       + + Y T+I  Y ++  V  A  L  E+ RQ   
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PNT+   T I  L   GR+++A  +F +    G++ D+  +  + +   +N+     + +
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + +  + + PD  I   +L+   +  E E A DL+S +  +G
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/463 (21%), Positives = 189/463 (40%), Gaps = 15/463 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +++  P VF  N V+  + +      AH + D M  RG+ P+  TY+ L+         D
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+     M       +++ Y+ LI    K+    KA+ +F  +    + P+ V YNT+I
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +        ++A  L  EM  +G  PD V+Y TL +   +N    +A+++   +   N  
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+     ++D   +    +DA  LF ++   G+ P+V +YN ++    +  L  EA  L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M +     N  TYN + + + ++ E  +   L++EM  RG   +  T + ++ +   
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 312 AGKLDRAAMLFQKL----RSSGVEID--PVLYQTMIVAYERVGL---------VAHAKRL 356
            G       +  K     R SG ++   P L+ +                   ++   R+
Sbjct: 513 DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM 572

Query: 357 LHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
           LH    P+T+     +T +A+         +  Q    G   D+     +I  F   ++ 
Sbjct: 573 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 632

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
                V  K+   G+ PD      ++N   K+     + D+++
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFT 675



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 166/346 (47%), Gaps = 13/346 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V+  N+++ +    ++   A  +  ++ + G  PD  TY TL+             + 
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM-------------NG 660

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M    +S D+  Y++LI     L ++    ++ + + +S I+P++V ++T+++   K
Sbjct: 661 LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             +   A  +++ M ++GV+PD V+Y+ L++ +    +  EA+ VF  M    C  ++ +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+I+ Y Q+     A  L   M   G+    V+YNTL+           AI LF  M 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 ++VTY  ++    K+    +A  L++ ++   ++ + + Y+  I    +AG+L+
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            A  LF  L S G++ D   Y  MI    + GL+  A +L  ++ +
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 110/498 (22%), Positives = 200/498 (40%), Gaps = 63/498 (12%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM------ 69
           SP+   YN++ R  LR  +      L +EM  RG + D  T + L+     +G+      
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 521

Query: 70  ----------------------------------------FDSAISWLQQMEQDRVSGDL 89
                                                    D A+S   +M         
Sbjct: 522 ILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPST 581

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           V ++ L+    K+  YS  +S+ +++ S GI PD+   N +IN F   +    A  ++ +
Sbjct: 582 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 641

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           + + G +PD V+Y TL+N                +M       D+ T N +I     L  
Sbjct: 642 LLKLGFQPDVVTYGTLMN-------------GLCKMITKGISPDIFTYNSLIHALCNLCE 688

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            K    L   M    I P+VV ++T++    +  +   A  +  +M ++ +E +VVTY  
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  +    E ++A  +   M ++G  PN  +Y+ +I  + +  ++D+A  L +++   G
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEAT 385
           +  D V Y T+I     VG + HA  L HE+     IP      I    L +   + EA 
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            + +    +    DI V+   I+   R  +     ++F  + S G  PD     ++++  
Sbjct: 869 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928

Query: 446 GKLREFETADDLYSEMQE 463
            K    + A+ L+ +M E
Sbjct: 929 CKRGLLDEANKLFRKMDE 946



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 122/587 (20%), Positives = 235/587 (40%), Gaps = 82/587 (13%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++A+L  I E + + P +  Y  +L  + RA + E A  LF  +  +G+ P+ +TY+ +
Sbjct: 378 KAMALLKAI-EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 436

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-------------------LARK 101
           I    K+G+   A     +M ++  S +   Y NLI                    LAR 
Sbjct: 437 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY-NLITRGFLRNNEALRTIELLEEMLARG 495

Query: 102 LS-DYSKAISIFSRLKSSGI------------------------VPDLVAYNTMINVFGK 136
            S D S    +   L   G+                        +P L   ++  ++  +
Sbjct: 496 FSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSR 555

Query: 137 AKLFK---EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           +  F    +A      M      P TV ++ LL    +   +   LS+  +M+    P D
Sbjct: 556 SPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPD 615

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---------VYGEAEL 244
           + T NI+I+ +  L     A  +   + K+G  P VV+Y TL+          +  +   
Sbjct: 616 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFT 675

Query: 245 FGEAIH-------------LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           +   IH             L   M   +I  NVV ++T++    K      A +++  M 
Sbjct: 676 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 735

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            RG+EP+ +TY+ ++       ++D A  +F  +   G   +   Y  +I  Y ++  + 
Sbjct: 736 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 795

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A  LL ++       +T+   T I  L   GR++ A  +F +   +G++ D+  +  ++
Sbjct: 796 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 855

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +   +N   A  + + + +  +    D  +  + ++   +  E E A DL+S +  +G  
Sbjct: 856 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 915

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLD-------SDSNINKKEL 507
              + +  M+     R   +    LF ++D       S S+ N+K L
Sbjct: 916 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSL 962



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 169/400 (42%), Gaps = 6/400 (1%)

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             EA      M  +   P TV ++ LL    +       LS+  +M+    P D+ T  I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I+    L+    A      + K+G  P   ++ TL+R        GEA+HLF  M  + 
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            + NVVTY T+I    K  +  +A N+  EM  +GI PN +TY+++I    K  +     
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK----RLLHELRQPNTIPRETAITIL 375
            L  ++  S +  D     T++ A  + G+VA A      ++H   +PN +     +   
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
                ++ A  VF        V ++  +  +I  + + +     + +FE+M      P++
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR-KDFNMLESLFE 494
                +++    +   + A  L+ EM   G +  D V ++ LS Y  + +  +   +L +
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 495 RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            ++  +     +++  +     RA  L DA  + + ++ +
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 424


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 242/528 (45%), Gaps = 19/528 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+ F YN ++  +++ ++   A  +F+EM    ++P+R TY+ LI      G F+ A+ 
Sbjct: 77  APNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALR 136

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  ME   +  D V Y  L+    KL+ +  A S+  R++ SG+V    AY  MI+   
Sbjct: 137 LLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLC 196

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDL 194
           K  L  E+  L++ M + G  PD +++S L+N + +  K   A  V  +M +    P  +
Sbjct: 197 KHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYV 256

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
               ++ +   + D+  +A R + +M + G D      N L+     A    EA    R 
Sbjct: 257 IYATLIYNSCKKGDIT-EAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRH 315

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M   ++  N +T++ +I  YG   +  KA ++  EM   G  P+  TY +++    K G 
Sbjct: 316 MSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGN 375

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           L  A  L  KL      +D  +Y T++    + G ++ A  L  E+ Q N +P      I
Sbjct: 376 LREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAI 435

Query: 375 ----LARAGRIEEATWVFRQAFDAG-----EVKDISVFGCMIELFSRNKKYANVIEVFEK 425
               L+R G++  A   F +A   G     +V   S+F  + ++   N        ++E+
Sbjct: 436 ILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASY----IYEE 491

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           M   G  PD+  I  VL+ Y ++ + E  + L+ +MQ      S   +  +L  Y  +KD
Sbjct: 492 MEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKD 551

Query: 486 FNMLESLFERLDSDSNINKKEL--HHVVAGIYERANRLNDASRIMNRM 531
             +  S F  + +   I+  +L  H ++ G+  ++  L+   +++ +M
Sbjct: 552 L-LKCSKFYNIMTRMGISPDKLTCHSIILGLC-KSGMLDVGFKMLKKM 597



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 183/435 (42%), Gaps = 33/435 (7%)

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           ME       +V Y+ ++    K   Y  A  +  R++S GI  D+  YN +I+   K   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +  LL+++MR++ + P+  +Y+TL+N  ++  K   A  VF EM  +N   +  T NI
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +ID +      + A RL   M   G+ P  V+Y  LL    +   F  A     LM+R  
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAK---SLMERIR 177

Query: 260 IEQNVVTYNTMIKIYGKSLEH---EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           +   VV Y     +     +H   +++  L+  M   G  P+ IT+S +I  + KAGK+ 
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRETAI 372
            A  +  K+  +G+  + V+Y T+I    + G +  A R    +       +       I
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           + L RAGR+ EA    R         +   F C+I  +           +F++M   G+ 
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357

Query: 433 PDSHIIALVLNSY---GKLREFE------------TADDLYSEMQEEGC---VFSDQVHF 474
           P       +L      G LRE +               ++Y+ +  E C     SD V  
Sbjct: 358 PSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAV-- 415

Query: 475 QMLSLYGARKDFNML 489
              +L+G    FN+L
Sbjct: 416 ---ALFGEMVQFNVL 427



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 1/313 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +    +PS+  YN++L    + K        ++ M + GI+PD+ T  ++I    K GM 
Sbjct: 528 QSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGML 587

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D     L++M  +    D +  + LI  + +     KA  + +     GI+PD+  YN +
Sbjct: 588 DVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAI 647

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
                +A   +E+ LL+ +M E+G+ P +  Y +L+N          A  +  EM  +  
Sbjct: 648 FTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGV 707

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                  + M+    Q    ++A  +   M +  + P+V ++ TL+ +  +     EA+ 
Sbjct: 708 SSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALK 767

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIW 309
           L   M    ++ +VV YN +I       +   A NL +EM+ RG+ PN  TY T+I AI 
Sbjct: 768 LRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAIS 827

Query: 310 GKAGKLDRAAMLF 322
              G+++   +++
Sbjct: 828 TNEGEVEERLLVY 840



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/456 (20%), Positives = 194/456 (42%), Gaps = 5/456 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + PS F Y  +L+ + +      A  L  ++     A D   Y+T+++   K G    A+
Sbjct: 356 HCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAV 415

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV-PDLVAYNTMINV 133
           +   +M Q  V  D   Y+ ++    +      A+  F +  + G + P+ V Y ++ + 
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDG 475

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K      A  + EEM  +G+ PDT++ + +L+ Y    K  +   +F +M   +    
Sbjct: 476 LFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPS 535

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L T NI++  Y +        + +  M +MGI P  ++ ++++    ++ +      + +
Sbjct: 536 LATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLK 595

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  ++   + +T N +I    ++ +  KA +L+      GI P+  TY+ I     +A 
Sbjct: 596 KMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRAS 655

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IPRE 369
            L  + +L   +   G+      Y ++I    R+G +  A RL  E+         +   
Sbjct: 656 ALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAES 715

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             +  LA+ G++EEA  V         +  ++ F  ++ +  +  K +  +++  KM   
Sbjct: 716 AMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALY 775

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           G   D     ++++      +   A +LY EM+E G
Sbjct: 776 GVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/457 (21%), Positives = 195/457 (42%), Gaps = 8/457 (1%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M   G  P   TY+T++    K+G + +A   + +ME   +  D+  Y+ LI+   K + 
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
            +K   +  +++   I P+   YNT+IN   K +    A  +  EM    + P+ V+Y+ 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++ + +   F +AL +   M       D      ++    +L     A  L   +R  G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           +     +Y  ++    +  L  E++ L  +M +     +++T++ +I  + K+ + + A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            ++ +M   G+ PN + Y+T+I    K G +  A   +  +  +G ++D  +   +I + 
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 345 ERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            R G VA A+  +  +      PN+I  +  I      G   +A  +F +    G     
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +G +++   +        ++  K+       D++I   +L+   K  +   A  L+ E
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESL--FER 495
           M +   V  D  H   + L G  +   M+ +L  FE+
Sbjct: 421 MVQFN-VLPDS-HTYAIILAGLSRKGKMVPALLFFEK 455


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 201/429 (46%), Gaps = 4/429 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E  +  P +F +N+++           A  +  ++ + G  PD  T +TLI      G  
Sbjct: 91  ELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKV 150

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+ +   +       D V Y  LI    K  +   A+ +  ++    + P++V YNT+
Sbjct: 151 REALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTI 210

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K KL   A  L  EM  + + PD V+Y+TL+   +   +  EA+ +F +M   N 
Sbjct: 211 IDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNI 270

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D+ T NI++D   +    K A  +   M K G+D ++V+YN+L+  Y   +   +A  
Sbjct: 271 KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATF 330

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M R+ +  +V +Y+ MI    K+   ++A NL +EM ++ + PN +TY+++I    
Sbjct: 331 VFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL 390

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K G++  A  L  ++ + G   D + Y +++ A  +   V  A  L+ +++    QPN  
Sbjct: 391 KYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIY 450

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                +  L + GR+++A  V++     G   D+ ++  M+    +   +   + +  KM
Sbjct: 451 TYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510

Query: 427 RSAGYFPDS 435
              G  PD+
Sbjct: 511 EDNGCIPDA 519



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 195/417 (46%), Gaps = 8/417 (1%)

Query: 55  YTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
           + ++ +++   K   F +AIS+ +QME  ++  DL  ++ LI     L   + A S+ ++
Sbjct: 65  FEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAK 124

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +   G  PD V   T+I         +EA    +++  +G   D VSY TL+N   +  +
Sbjct: 125 IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE 184

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
              AL V  +++ +    ++   N +ID   +  +   A  L   M    I P VV+Y T
Sbjct: 185 TRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTT 244

Query: 235 LLRVYGEAEL--FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           L  +YG   +    EA+ LF  M  K I+ +V T+N ++    K  E +KA N++  M  
Sbjct: 245 L--IYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIK 302

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           +G++ N +TY++++  +    + ++A  +F  +   GV  D   Y  MI    +  +V  
Sbjct: 303 QGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDE 362

Query: 353 AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
           A  L  E+      PNT+   + I  L + GRI +A  +  +  + G+  D+  +  +++
Sbjct: 363 AVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLD 422

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              +N +    I +  K++  G  P+ +   ++++   K    + A  +Y ++  +G
Sbjct: 423 ALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 207/458 (45%), Gaps = 45/458 (9%)

Query: 15  YSPSVFAYNVVLRNV-LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + P++  +N ++R + +  K  E+ H LFD+M   G  P+  TY TLI    K G   +A
Sbjct: 134 HQPNIATFNTLIRGLCVEGKIGEVLH-LFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  L+ MEQ     D+V+Y+++I+   K    ++A ++FS +   GI P +  YN++I+ 
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 252

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
                 +K    L+ EM    + P+ V +ST+++   +  K +EA  V            
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV------------ 300

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                        +DM          M K G++P+VV+YN L+  +       EA+ +F 
Sbjct: 301 -------------VDM----------MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K    +VV+Y+T+I  Y K    EKA  L +EM  + + PN +TYST++      G
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +L  A  LF ++ + G   D V Y  ++    +   +  A  LL  +   N  P     T
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 457

Query: 374 I----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           I    + RAG +E A  +F      G   ++  +  MI    +    A   ++F +M+  
Sbjct: 458 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517

Query: 430 GYFPDSHIIALVLNSYGKLREFET--ADDLYSEMQEEG 465
           GY P+     L+  + G LR  ET     L  EM   G
Sbjct: 518 GYSPNGCTYNLI--TRGFLRNNETLRGIQLLQEMLARG 553



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 191/428 (44%), Gaps = 4/428 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ L+    K   + + +S   QM+   +  ++   + LI     
Sbjct: 56  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 115

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L     A S+ +++   G  P++  +NT+I          E   L ++M  +G +P+ V+
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +   M + NC  D+     +ID   +      A  LF  M 
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI PS+ +YN+L+        +     L   M   +I  NVV ++T++    K  +  
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A +++  M  RG+EPN +TY+ ++       ++D A  +F  +   G   D V Y T+I
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+ +    PNT+   T +  L   GR+++A  +F +    G++
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D   +  +++   +N++    I + + +  +   PD  I  +V++   +  E E A DL
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 458 YSEMQEEG 465
           +S +  +G
Sbjct: 476 FSNLSSKG 483



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 162/347 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SPS+F YN ++  +    +W+    L +EM    I P+   +ST++    KEG    A  
Sbjct: 240 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 299

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M +  V  ++V Y+ L++     S+  +A+ +F  +   G  PD+V+Y+T+IN + 
Sbjct: 300 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 359

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K +  ++A  L EEM  + + P+TV+YSTL++      +  +A+++F EM       D  
Sbjct: 360 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 419

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +  I++D   +     +A  L  ++    +DP +  Y  ++     A     A  LF  +
Sbjct: 420 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 479

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  NV TY  MI    +     +A+ L  EM+ +G  PN  TY+ I   + +  + 
Sbjct: 480 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 539

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            R   L Q++ + G   D      ++      GL    K++L E  Q
Sbjct: 540 LRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 162/350 (46%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF EM  +GI+P  +TY++LI        +
Sbjct: 200 EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEW 259

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L +M   ++  ++V++S +++   K     +A  +   +   G+ P++V YN +
Sbjct: 260 KHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M  +G  PD VSYSTL+N Y +  +  +A+ +F EM     
Sbjct: 320 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T + ++     +   +DA  LF  M   G  P  VSY  LL    +     EAI 
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   ++ ++  Y  +I    ++ E E A +L   + ++G+ PN  TY+ +I    
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           + G L  A+ LF +++  G   +   Y  +   + R        +LL E+
Sbjct: 500 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 197/435 (45%), Gaps = 4/435 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V AYN V+    R  Q E A+ LF EM  +GI P+  TY+T+I    K  + D A   
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGV 218

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            QQM    V  D   Y+ LI        + + + +   + + G+ PD + Y  +++   K
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EARL  + M  +G+KPD   Y+ LL+ Y       E  S    M       +   
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NIM   Y +  M ++A  +F  MR+ G+ P VVS+  L+    +     +A+  F  M 
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +  N+  +++++       + EKA  L  E+ ++GI  +A+ ++T++      G++ 
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
            A  L   +   GV  + + Y T++  +   G +  A +LL  +      P E   TIL 
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518

Query: 377 R----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           R    A R+++A  +FR+    G    ++ +  ++    +  +++   E++  M ++   
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578

Query: 433 PDSHIIALVLNSYGK 447
            D +   ++LN   K
Sbjct: 579 CDIYTYNIILNGLCK 593



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 202/449 (44%), Gaps = 5/449 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           +V   + +L+ +  AK+ + A   L   M + G  PD   Y+T+I  F +EG  + A + 
Sbjct: 124 NVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNL 183

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    +  ++V Y+ +I+   K     +A  +F ++   G+ PD   YN +I+ +  
Sbjct: 184 FLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLS 243

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              +KE   ++EEM   G++PD ++Y+ LL+   +N +  EA   F  M       D+  
Sbjct: 244 TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             I++  Y       +       M   G+ P+   +N +   Y +  +  EA+H+F  M+
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +  +VV++  +I    K    + A     +M N G+ PN   +S+++      GK +
Sbjct: 364 QQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWE 423

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF ++   G+ +D V + T++      G V  A+RL+  +     +PN I   T +
Sbjct: 424 KAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
                 GRI+EA  +       G   +   +  ++  + + ++  +   +F +M   G  
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVT 543

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEM 461
           P       +L+   +   F  A++LY  M
Sbjct: 544 PVVATYNTILHGLFQTGRFSEANELYLNM 572



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 216/497 (43%), Gaps = 57/497 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  V+  + +A+  + A G+F +M  RG+ PD  TY+ LI  +   G +   +  
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQM 253

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY--------- 127
           L++M    +  D + Y+ L++   K     +A   F  +   GI PD+  Y         
Sbjct: 254 LEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYAT 313

Query: 128 --------------------------NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                     N M   + K  + +EA  +  +MR+QG+ PD VS
Sbjct: 314 KGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 162 YSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDLTTCNIMID---VYGQLDMAK--DADR 215
           +  L++   +  +  +A+  F +M NE   P      NI +    VYG   + K   A+ 
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTP------NIFVFSSLVYGLCTVGKWEKAEE 427

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           LF+ +   GI    V +NTL+          EA  L  LM R  +  NV++YNT++  + 
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
            +   ++A  L+  M + G++PN  TY+ ++  + KA ++D A  LF+++   GV     
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVA 547

Query: 336 LYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y T++    + G  + A  L    ++   + +       +  L +   ++EA  +FR+ 
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS---HIIALVLNSYGKL 448
                  D   F  MI    +  +  + +++F  + + G  PD     +IA  L   G L
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667

Query: 449 REFETADDLYSEMQEEG 465
            EF   D L+S M++ G
Sbjct: 668 GEF---DGLFSAMEKSG 681



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 209/494 (42%), Gaps = 46/494 (9%)

Query: 18  SVFAYNVVLRNVLRA---KQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFD 71
           SV A+N +L  V RA      E    LF  M +     +AP+  TYS LI CF + G  +
Sbjct: 48  SVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLE 107

Query: 72  SAIS---------W---------------------------LQQMEQDRVSGDLVLYSNL 95
              +         W                           L +M +     D+V Y+ +
Sbjct: 108 HGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTV 167

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           I    +     KA ++F  +   GI P++V Y T+I+   KA++   A+ + ++M ++GV
Sbjct: 168 INGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGV 227

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           KPD  +Y+ L++ Y+   K+ E + +  EM+      D  T  +++D   +    ++A  
Sbjct: 228 KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL 287

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
            F SM + GI P V  Y  LL  Y       E      LM    +  N   +N M   Y 
Sbjct: 288 FFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYA 347

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K    E+A ++  +M+ +G+ P+ +++  +I    K G++D A + F ++ + GV  +  
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIF 407

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQA 391
           ++ +++     VG    A+ L  E+       + +   T +  L   GR+ EA  +    
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G   ++  +  ++       +     ++ + M S G  P+     ++L  Y K R  
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527

Query: 452 ETADDLYSEMQEEG 465
           + A  L+ EM  +G
Sbjct: 528 DDAYSLFREMLMKG 541



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 191/417 (45%), Gaps = 6/417 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   +N++     +    E A  +F++MRQ+G++PD  ++  LI    K G  D A+ 
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVL 392

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT-MINVF 134
              QM  + V+ ++ ++S+L+     +  + KA  +F  +   GI  D V +NT M N+ 
Sbjct: 393 QFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLC 452

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + ++  EA+ LI+ M   GV+P+ +SY+TL+  +    +  EA  +   M       + 
Sbjct: 453 NEGRVM-EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNE 511

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T  I++  Y +     DA  LF  M   G+ P V +YNT+L    +   F EA  L+  
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M     + ++ TYN ++    K+   ++A  + + + ++  + +++T++ +I    K G+
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            + A  LF  + + G+  D V Y+ +       G +     L   + +  T P    +  
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNA 691

Query: 375 LAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           L R     G I  A     +  +     + S    +I L+SR +   +   + EK R
Sbjct: 692 LVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEKYR 748



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 47/335 (14%)

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ---NRGIEPNA 299
           +LF E +H  R    +   Q +    T++   G S   E+  +L   M    +  + PNA
Sbjct: 35  KLFDELLHCARPASVRAFNQLL----TVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 300 ITYSTIIAIWGKAGKLDRA------------------------------------AMLFQ 323
            TYS +I  + + G+L+                                       +L  
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG 379
           ++   G   D V Y T+I  + R G V  A  L  E+      PN +   T I  L +A 
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
            ++ A  VF+Q  D G   D   + C+I  +    K+  V+++ E+M + G  PD    A
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 440 LVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           L+L+   K      A   +  M  +G      ++  +L  Y  +   + + S  + +  +
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 500 SNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                + + +++   Y +   + +A  I N+M ++
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQ 365


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 236/533 (44%), Gaps = 15/533 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV ++N ++  ++       AH ++  MR RG+  D YTY+  I  F K     +A+  
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M +     + V Y  ++       ++  A  +F  + +  + PD+VA+N +++V  K
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTL---------LNLYVENHKFVEALSVFAEMNE 187
             L  E+  L+ ++ ++GV P+  +++           L+  V N + VEA     +M  
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D  T N +ID Y +  M +DA+R+       G  P   +Y +L+  + +      
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ +F+    K +  ++V YNT+IK   +      A  LM EM   G  PN  TY+ +I 
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQP 363
              K G +  A+ L     + G   D   Y T+I  Y +   +  A  +++ +      P
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I   T +  L +AG+ EE   +F+   + G   +I  +  +++   + KK    +++ 
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGA 482
            +M+S G  PD      +   + K+ + + A  L+  M+++  V      + ++ S +  
Sbjct: 529 GEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSE 588

Query: 483 RKDFNMLESLFERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           + + NM   LF  + +S  + +      V+ G  +  N       ++  M KR
Sbjct: 589 QLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 143/305 (46%), Gaps = 1/305 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F Y  ++    +    + A  +F +   +G+ P    Y+TLI    ++G+   A+
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M ++    ++  Y+ +I    K+   S A  +     + G  PD+  YNT+I+ +
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K      A  ++  M  QG+ PD ++Y+TLLN   +  K  E + +F  M E  C  ++
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI++D   +     +A  L   M+  G+ P VVS+ TL   + +      A  LFR 
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 255 MQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           M+++ ++     TYN ++  + + L    A  L   M+N G +P+  TY  +I  + K G
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG 625

Query: 314 KLDRA 318
            + + 
Sbjct: 626 NITQG 630



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/390 (21%), Positives = 183/390 (46%), Gaps = 5/390 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    YN ++    +    + A+ +  +   +G  PD +TY +LI  F K+G  D A+
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +  +      +   +VLY+ LI+   +      A+ + + +  +G +P++  YN +IN  
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +A  L+++   +G  PD  +Y+TL++ Y +  K   A  +   M       D+
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDV 470

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +++   +   +++   +F +M + G  P++++YN ++    +A+   EA+ L   
Sbjct: 471 ITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGE 530

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAG 313
           M+ K ++ +VV++ T+   + K  + + A  L + M+ +  +     TY+ I++ + +  
Sbjct: 531 MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQL 590

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA-- 371
            ++ A  LF  +++SG + D   Y+ +I  + ++G +    + L E  +   IP  T   
Sbjct: 591 NMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFG 650

Query: 372 --ITILARAGRIEEATWVFRQAFDAGEVKD 399
             +  L    ++ EA  +       G V +
Sbjct: 651 RVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 161/420 (38%), Gaps = 62/420 (14%)

Query: 103 SDYSKAISIFSRLKS-SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           +D  KA+ +F+  KS  G       Y  ++   G    F+E   L+ EMRE       V+
Sbjct: 18  TDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN------VN 71

Query: 162 YSTLLNLYVE-------NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
            + L   Y+E         K  EA+  F  M+  NC   + + N ++++  +      A 
Sbjct: 72  NALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAH 131

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +++  MR  G+   V +Y   ++ + +      A+ L R M     + N V Y T++   
Sbjct: 132 KVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191

Query: 275 GKSLEHEKATNLMQEMQ-----------------------------------NRGIEPNA 299
             S EH+ A  L  EM                                     RG+ PN 
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251

Query: 300 ITYSTIIAIWGKAGKLDRAAM---------LFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
            T++  +    + G LDRA             +K+ + G E D + Y ++I  Y + G+V
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
             A R+L +      +P+     + I    + G  + A  VF+     G    I ++  +
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           I+  S+       +++  +M   G  P+     LV+N   K+     A  L  +   +GC
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 3/177 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P++  YN+++ ++ +AK+   A  L  EM+ +G+ PD  ++ TL T F K G  
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDI 556

Query: 71  DSAISWLQQME-QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           D A    ++ME Q  V      Y+ ++    +  + + A+ +FS +K+SG  PD   Y  
Sbjct: 557 DGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRV 616

Query: 130 MINVFGK-AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +I+ F K   + +  + L+E M ++ + P   ++  +LN      K  EA+ +   M
Sbjct: 617 VIDGFCKMGNITQGYKFLLENMEKRFI-PSLTTFGRVLNCLCVKDKVHEAVGIIHLM 672



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 1/217 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  YN +L  + +A + E    +F  M ++G  P+  TY+ ++    K    + A+ 
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVF 134
            L +M+   +  D+V +  L     K+ D   A  +F R+ K   +      YN +++ F
Sbjct: 527 LLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAF 586

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            +      A  L   M+  G  PD  +Y  +++ + +     +      E  E      L
Sbjct: 587 SEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSL 646

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
           TT   +++     D   +A  +   M + GI P  V+
Sbjct: 647 TTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN+++          +A  LF  M+  G  PD YTY  +I  F K G       +L + 
Sbjct: 578 TYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLEN 637

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            + R    L  +  ++          +A+ I   +   GIVP+ V  NT+       K+ 
Sbjct: 638 MEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFE--ADKKVV 693

Query: 141 KEARLLIEEMREQG 154
              ++L+E++ ++G
Sbjct: 694 AAPKILVEDLLKKG 707


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 14/459 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGL--FDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           + +  P++  +N ++ +  R K+ E+   +   D MR  G  P+  +Y+ L+     +G 
Sbjct: 200 KCQIRPTIVTFNTMMDS--RCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           FD A   ++QM    +      Y+ LI    K   + +A  +   +   G +P +V YNT
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           ++    +     +AR  ++ M  + + PD VSY+TL+  Y     F EAL +F+E+   N
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377

Query: 190 CPLDLTTCNIMIDV---YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
               + T N +ID     G LD+AK        M K G+ P VV++  L+R + +     
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKD---DMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A  LF  M  + ++ + + Y T I    K     KA  + +EM+  G  P+ ITY+ +I
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
               K G  D A  L QK+R  G+  D V Y ++I A+   GL+  A+ +  ++ +    
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554

Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P     T+L    A  GR++ A   F +  D G   ++  +  +I    +         +
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           F +M S G  P+ +   +++N    L+ ++ A  LY +M
Sbjct: 615 FAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDM 653



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 164/320 (51%), Gaps = 7/320 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  YN ++    R    ++A G+ D+M + G+ PD  T++ L+  F + G    A   
Sbjct: 380 PSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKEL 439

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M    +  D + Y+  I    KL + SKA  +   +K+ G  PDL+ YN +IN   K
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F +A  L+++MR +G+ PD V+Y+++++ ++ +    +A  VF++M +      + T
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             ++I  Y   G+LD AK   + F  M+  G+ P+V++YN L+    +  +   A +LF 
Sbjct: 560 YTVLIHSYAVRGRLDFAK---KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFA 616

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+ K +  N  TY  +I         + A  L ++M +R I+P++ T+S ++    K  
Sbjct: 617 EMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDY 676

Query: 314 KLDRAAMLFQKLRSSGVEID 333
           KL  A +  + L  + VEI+
Sbjct: 677 KL-LAVLRLENLPLAIVEIN 695



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 228/504 (45%), Gaps = 26/504 (5%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           SV +LD + +       VFA  ++L   L          +F +M   G+ PD    + ++
Sbjct: 136 SVKLLDLLIQ-------VFAKKLILEKCLM---------VFYKMVNNGLLPDVRNCNRVL 179

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                + M +        M + ++   +V ++ +++   K  +  +A+ +   ++  G  
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ V+YN ++N       F  A+ LIE+M   G+K    +Y+ L+  + +   F EA  +
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             EM        + T N ++    +L    DA R    M    + P +VSYNTL+  Y  
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
              F EA+ LF  ++ K +  +VVTYNT+I    ++   + A  +  +M   G+ P+ +T
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++ ++  + + G L  A  LF ++ S G++ D + Y T IV   ++G  + A  +  E++
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479

Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
                P+ I     I  L + G  ++A  + ++    G V D   +  +I     +    
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              EVF  M   G  P      ++++SY      + A   + EMQ++G V  + + +  L
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG-VSPNVITYNAL 598

Query: 478 SLYGARKDFNMLE---SLFERLDS 498
            +YG  K+ NM++   +LF  ++S
Sbjct: 599 -IYGLCKE-NMMDVAYNLFAEMES 620



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 133/293 (45%), Gaps = 5/293 (1%)

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           N  + +   +++I V+ +  + +    +F+ M   G+ P V + N +L++  +  +  E 
Sbjct: 132 NSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEV 191

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             ++ +M + +I   +VT+NTM+    K  E  +A  ++  M+  G +PN ++Y+ ++  
Sbjct: 192 EEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNG 251

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
               G+ DRA  L +++   G+++    Y  +I  + +  +   A  L  E+      P 
Sbjct: 252 LSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPT 311

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +   T +  L R GR+ +A        +   + D+  +  +I  +SR   +A  + +F 
Sbjct: 312 VVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFS 371

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           ++RS    P       +++   +    + A  +  +M + G +  D V F +L
Sbjct: 372 ELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG-LCPDVVTFTIL 423



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 43/82 (52%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+V  YN ++  + +    ++A+ LF EM  +G++P++YTY+ LI        +  A+ 
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALK 648

Query: 76  WLQQMEQDRVSGDLVLYSNLIE 97
             + M    +  D   +S L++
Sbjct: 649 LYKDMLDREIKPDSCTHSALMK 670


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 221/499 (44%), Gaps = 37/499 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+  +YNVVL  ++     ++A  +F +M  RGI+P  YT+  ++  F      DSA 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S L+ M +     + ++Y  LI    + +  ++A+ +   +   G  PD+  +N +I+  
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 135 GKAKLFKEA-----RLLIEEMREQGV--------------------------KPDTVSYS 163
            KA    EA     R+L+ +     +                           P+TV Y+
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340

Query: 164 TLLNLYVENHKFVEALS-VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           TL+N YV + +F EA   ++  M       D  T NIMID   +      A      M K
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G +P+V++Y  L+  + +   F EA  +   M  K +  N V YN +I    K  + + 
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  +  EM ++G +P+  T++++I    K  K++ A  L++ +   GV  + V Y T+I 
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520

Query: 343 AYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
           A+ R+ L+  A +L+ E+R      + I     I  L + G  E+   +  Q F      
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
            I+    +I  F R  K  + ++    M   G  PD      ++N   K+  F+ A +L+
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640

Query: 459 SEMQEEGCVFSDQVHFQML 477
           + +Q +G +  D V +  L
Sbjct: 641 NGLQAKG-IHPDAVTYNTL 658



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 179/361 (49%), Gaps = 1/361 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGL-FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+   YN ++   + + ++E A  L +  M   G  PD +T++ +I    K+G   SA+
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +L +M +     +++ Y+ LI+   K   + +A  + + + + G+  + V YN +I   
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K    ++A  +  EM  +G KPD  ++++L+    +N K  EAL ++ +M       + 
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  + +L++ + AD+L   MR  G     ++YN L++   +     + + L   
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  +EI  ++ + N +I  + ++ +   A   +++M  RG+ P+ +TY+++I    K G+
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  LF  L++ G+  D V Y T+I  Y   GL   A +LL +      IP E   +I
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSI 692

Query: 375 L 375
           L
Sbjct: 693 L 693



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 159/329 (48%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A + P  F +N+++  + +      A    DEM ++G  P+  TY+ LI  F K+G F+ 
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A   +  M    +S + V Y+ LI    K      A+ ++  + S G  PD+  +N++I 
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    +EA  L  +M  +GV  +TV+Y+TL++ ++      +A  +  EM    CPL
Sbjct: 486 GLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPL 545

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T N +I    +    +    L   M    I PS+ S N L+  +       +A+   
Sbjct: 546 DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL 605

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M ++ +  ++VTYN++I    K    ++A NL   +Q +GI P+A+TY+T+I+ +   
Sbjct: 606 RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYE 665

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           G  + A  L  K  S+G   + + +  +I
Sbjct: 666 GLFNDACQLLFKGVSNGFIPNEITWSILI 694



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 197/438 (44%), Gaps = 13/438 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N V+  + +A +   A  L D M  R    D      L+    + G  D A + 
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINVFG 135
           L ++         VLY+ LI        + +A  + +  +  +G  PD   +N MI+   
Sbjct: 328 LSKIPNPNT----VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLC 383

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A   ++EM ++G +P+ ++Y+ L++ + +   F EA  V   M+     L+  
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I    +    +DA +++  M   G  P + ++N+L+    + +   EA+ L+R M
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  N VTYNT+I  + +    ++A  L+ EM+ RG   + ITY+ +I    K G  
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 316 DRAAMLFQKLRSSGVEIDPVL--YQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           ++   L +++   G EI P +     +I ++ R G V  A + L ++ Q    P+ +   
Sbjct: 564 EKCLGLIEQMF--GEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYN 621

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I  L + GR +EA  +F      G   D   +  +I  +     + +  ++  K  S 
Sbjct: 622 SLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSN 681

Query: 430 GYFPDSHIIALVLNSYGK 447
           G+ P+    ++++N + K
Sbjct: 682 GFIPNEITWSILINYFVK 699



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/538 (22%), Positives = 232/538 (43%), Gaps = 34/538 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y  S   Y +++  +    ++++   L  +M+  G       +  ++  +GK G+   A 
Sbjct: 90  YIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQAT 149

Query: 75  SWLQQMEQDRV-SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
             L  M            Y+ ++E+    +    A ++F  + S GI P +  +  ++  
Sbjct: 150 RLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKA 209

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F        A  L+ +M + G  P+++ Y  L++   EN++  EA+ +  EM  + C  D
Sbjct: 210 FCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPD 269

Query: 194 LTTCNIMIDVYGQL----DMAKDADRLFWSMRKMGIDPSVVSY--NTLLRVYGEAELFGE 247
           + T N +I    +     + AK  DR+   +R    D  +  Y  + L R+ G+ +   E
Sbjct: 270 VQTFNDVIHGLCKAGRIHEAAKLHDRML--LRDFTADALIQGYLMHGLCRM-GKVD---E 323

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM-QEMQNRGIEPNAITYSTII 306
           A    R M  K    N V YNT+I  Y  S   E+A +L+ + M   G EP+A T++ +I
Sbjct: 324 A----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMI 379

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP--- 363
               K G L  A     ++   G E + + Y  +I  + + G    A ++++ +      
Sbjct: 380 DGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLS 439

Query: 364 -NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
            NT+     I  L + G+I++A  ++ +    G   DI  F  +I    +N K    + +
Sbjct: 440 LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGL 499

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH---FQMLSL 479
           +  M   G   ++     +++++ +L   + AD L  EM+  GC   +  +    + L  
Sbjct: 500 YRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559

Query: 480 YGA-RKDFNMLESLF--ERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            GA  K   ++E +F  E   S ++ N      ++   + R  ++NDA + +  M +R
Sbjct: 560 TGATEKCLGLIEQMFGEEIFPSINSCN------ILINSFCRTGKVNDALQFLRDMIQR 611



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 166/377 (44%), Gaps = 5/377 (1%)

Query: 93  SNLIELARKLSDYSKAISIFSRLK-SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           S L +L     D   ++ +F +     G +     Y  +I+  G    FK    L+++M+
Sbjct: 62  SQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMK 121

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC--PLDLTTCNIMIDVYGQLDM 209
           ++G       +  ++  Y +     +A  +  +M  V C  P    + N+++++    + 
Sbjct: 122 DEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEP-TFKSYNVVLEILVAGNC 180

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            K A  +F+ M   GI P+V ++  +++ +        A  L R M +     N + Y  
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I    ++    +A  L++EM   G EP+  T++ +I    KAG++  AA L  ++    
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT-WVF 388
              D ++   ++    R+G V  A+ +L ++  PNT+   T I     +GR EEA   ++
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
           +    AG   D   F  MI+   +     + +E  ++M   G+ P+     ++++ + K 
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQ 420

Query: 449 REFETADDLYSEMQEEG 465
             FE A  + + M  +G
Sbjct: 421 GHFEEASKVVNSMSAKG 437



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 90/162 (55%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            YN +++ + +    E   GL ++M    I P   + + LI  F + G  + A+ +L+ M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
            Q  ++ D+V Y++LI    K+  + +A+++F+ L++ GI PD V YNT+I+ +    LF
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
            +A  L+ +    G  P+ +++S L+N +V+N+   E  ++ 
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 420 IEVFEKMR-SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
           +++FEK     GY    H+  L+++  G + EF+  D L  +M++EGCVF + +   ++ 
Sbjct: 78  MDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMR 137

Query: 479 LYG 481
            YG
Sbjct: 138 YYG 140


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 5/411 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKE 67
           + E    +P V AYN ++    +A   + A  +F  ++Q G   P+  ++ TL+    K 
Sbjct: 1   MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                A++  Q+M    +  D+ + + LI    +L    +A  +   + +   V D+  Y
Sbjct: 61  SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTY 120

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           + +++  GKA    +A  +   M++ G  PDTV Y+ L++   +  K  EAL +  +MN 
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D  T NI+IDV       + A   F  M++    P VV+YNTLL    +     E
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 240

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF  MQ  +   ++ T+ T+I    K+   E A      +   G  PN+  Y+ +I+
Sbjct: 241 ACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALIS 300

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + ++G++D+   LFQ +       D + Y  +++ + R G  + A  LL E+ +    P
Sbjct: 301 GFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 360

Query: 368 RETAITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
                 +L R    AG++E+A  +F++    G   D+  +  +  L + NK
Sbjct: 361 ALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNK 411



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 169/355 (47%), Gaps = 5/355 (1%)

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHK 174
           ++    PD+VAYNT+I  + KA     A  +   ++++G  KP+ VS+ TL+    +  +
Sbjct: 3   ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +AL+VF EM       D+  CN +I    +L M + A RL   M        V +Y+ 
Sbjct: 63  ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+   G+A    +A+ +F  MQ+     + V YN +I   GK  + ++A  L+++M  +G
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           I P+  TY+ +I +    G+ ++A   F  ++      D V Y T++   +++     A 
Sbjct: 183 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 242

Query: 355 RLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
            L  E++    +P  T     I  LA+AGR+E+A     +    G V +  ++  +I  F
Sbjct: 243 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGF 302

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            R+ +     E+F+ M     FPDS    +++  + +      A +L  EM  EG
Sbjct: 303 CRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 5/246 (2%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFR-LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
           P VV+YNTL+  Y +A     A+ +FR L Q    + N V+++T++    K      A  
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           + QEM   G++ +    +T+I    + G L +A  L   + +    +D   Y  ++ A  
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G  A A  +   +++    P+T+     I+ L + G+++EA  +       G + D  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I++ S   +Y      F  M+   + PD      +LN   KLR  + A DL+ EM
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 462 QEEGCV 467
           Q   C+
Sbjct: 249 QANKCM 254



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 5/208 (2%)

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
           D V Y T+I  Y + G    A  +   L+Q     PN +  +T +  L +  R  +A  V
Sbjct: 10  DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
           F++   AG   D++V   +I    R         +   M +  +  D    + ++++ GK
Sbjct: 70  FQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGK 129

Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
                 A +++S MQ+ GC+    V+  ++S  G +   +    L E ++    +     
Sbjct: 130 AGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 189

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRR 535
           +++V  +     R   A      M +R+
Sbjct: 190 YNIVIDVLSSCGRYEKAYSFFGMMKRRK 217


>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
 gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
          Length = 425

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V   N V+    R+ +       F E+ + G  P+ YTY  +I    K G    A+  L 
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +  +  D +L + +++   K +   +A  +F+ +KS G   D   Y  +I   G+ K
Sbjct: 74  KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             +EA LL +EM E+G  P   +Y+ ++++Y +  +   A+ V  +M + N   D  T N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I    +    + A  +F  M+K G+  + VS+N +L   G+A   G A      M+ +
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I+ N +T+NT+I   G++    +A  ++QEM++ G+ P+  TY+ +I  + KAG + +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR- 377
             +F  +  +G   + V Y  +I A  + G    A+ +  ++++   +P     T+L + 
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQL 373

Query: 378 AGRIE 382
           AG+ +
Sbjct: 374 AGKCK 378



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 174/354 (49%), Gaps = 5/354 (1%)

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +I  +G++    +     +E+ + G KP+  +Y  ++   V+    V A+ +  +M +
Sbjct: 18  NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIK 77

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D   CN+++D  G+ +M  +A +LF SM+ MG      +Y  L+R  G  +   E
Sbjct: 78  TGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEE 137

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF  M+ +    +   Y  +I IY K+   E A  ++++M ++ + P+  T +++I 
Sbjct: 138 ATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLIT 197

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
              + G+ + A  +F++++ SGV ++ V +  M+    + G V  A + + E+     +P
Sbjct: 198 AVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKP 257

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N+I   T I  L RA    EA  V ++   AG   D+  + CMIE F++        E+F
Sbjct: 258 NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMF 317

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             M  AG   +     L++++  K   ++ A D+Y +M+++G +  D +   +L
Sbjct: 318 GDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKG-ILPDAITATVL 370



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 150/319 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ + Y  V++++++A    LA  L D+M + G+ PD    + ++   GK  M D A   
Sbjct: 47  PNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKL 106

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
              M+      D   Y+ LI    +     +A  +F  ++  G  P   AY  +I+++ K
Sbjct: 107 FASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCK 166

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A   + A +++++M ++ + PD  + ++L+       +   A  +F  M +    ++  +
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M+D  G+      A +    M   GI P+ +++NTL+   G A+   EA  + + M+
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMR 286

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +V TY  MI+ + K+    KA  +  +M+  G   N +TY+ +I    KAG+  
Sbjct: 287 SAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346

Query: 317 RAAMLFQKLRSSGVEIDPV 335
            A  ++  ++  G+  D +
Sbjct: 347 DARDIYFDMKKKGILPDAI 365



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 6/358 (1%)

Query: 90  VLYSNLIELA-RKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
           VL SN +  A  + S   K +  F  L   G  P+   Y  +I    KA     A  L++
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           +M + G++PDT+  + +L+   + +   EA  +FA M  + CP D  T  I+I   G+  
Sbjct: 74  KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             ++A  LF  M + G  PS  +Y  ++ +Y +A     A+ + + M  K +  +  T N
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           ++I    ++   E A  + + M+  G+  N ++++ ++   GKAGK+  A     ++ + 
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEAR 253

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
           G++ + + + T+I    R    + A ++L E+R     P+       I   A+AG + +A
Sbjct: 254 GIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKA 313

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
             +F     AG   ++  +  +I+   +  +Y +  +++  M+  G  PD+ I A VL
Sbjct: 314 FEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDA-ITATVL 370



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 125/236 (52%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +PS  AY  V+    +A + E A  +  +M  + +APD YT ++LIT   + G  
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT 205

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A    ++M++  V+ + V ++ +++   K      A      +++ GI P+ + +NT+
Sbjct: 206 ELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTL 265

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN  G+AK   EA  +++EMR  G+ PD  +Y+ ++  + +     +A  +F +M +  C
Sbjct: 266 INCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGC 325

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
             ++ T N++ID   +    +DA  +++ M+K GI P  ++   L ++ G+ +L G
Sbjct: 326 SANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKLSG 381


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 232/508 (45%), Gaps = 39/508 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +L  +  +   +P+ F+YNVV+  + +A     A  LFDEM ++ + P+  TY+T+I
Sbjct: 171 AVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMI 230

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K+G  +S      QM +  +  +++ Y+ L+    +     +  ++   + S  +V
Sbjct: 231 DGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMV 290

Query: 122 PDLVAYN-------------TMINVFGKA-----------------KLFKEARL-----L 146
           PD   Y+             TM+++F ++                  L K+ ++     +
Sbjct: 291 PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350

Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
           ++ +   G+   TV Y+TL+N Y +      A S+F +M       D  T N +I+  G+
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
           ++   +A  L   M K G++PSV ++NTL+  YG A    +   +   MQ K ++ NVV+
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y +++  + K+ +  +A  ++ +M  + + P A  Y+ II  + + G  D+A ML +K++
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
           SSGV    V Y  +I    +   ++ A+ LL  LR     P+ I   T I+        +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  + ++ +  G       +  +        +   +  ++++M      P S I  +++
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSD 470
           ++Y K  E    + L  EM ++G    D
Sbjct: 651 DAYAKCGEESKVEALRKEMSDKGIAVGD 678



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/527 (20%), Positives = 244/527 (46%), Gaps = 5/527 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGI-APDRYTYSTLITCFGKEGMFD 71
           AR  P  F +N  ++  + A   + A G+   M   G  AP+ ++Y+ +I    K G   
Sbjct: 146 ARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDC 205

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    +M +  V  + + Y+ +I+   K  D      ++S++   G+ P+++ YN ++
Sbjct: 206 DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLL 265

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +A    E   +++EM  + + PD  +YS L + +         LS+F E  +    
Sbjct: 266 SGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           +   TC+I+++   +      A+ +  ++   G+  + V YNTL+  Y +      A  +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F+ M+ + I  + +TYN +I   GK     +A +L+ EM+  G+ P+  T++T+I  +G+
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG+L++  ++   ++  G++ + V Y +++ A+ + G +  A  +L ++   + +P    
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505

Query: 372 ITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              +  A    G  ++A  +  +   +G    I  +  +I+   +  + +   E+ + +R
Sbjct: 506 YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLR 565

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
           + G  PD      ++++       + A +L  EM + G   S + +  + S  G     +
Sbjct: 566 NYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVH 625

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            +E+L++++     +    +++++   Y +    +    +   M+ +
Sbjct: 626 EMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 59/477 (12%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ VL  +  A + ELA  LF+EM++ G+  D YTY+ ++  F K G+ + A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 75  SWLQQMEQDRVSGDLVLYSNLIEL---ARKLS-------------------DYS------ 106
            W  +M +   + ++V Y+ LI     A+K+S                    YS      
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 107 -------KAISIFSRLKSSGIVPDL----------------VAYNTMINVFGKAKLFKEA 143
                  KA  IF R+  S  VPD+                V Y  +++ F K+   +EA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           R L++ M  +G +P+ + Y  L++   +  K  EA  V  EM+E   P  L T + +ID 
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y ++     A ++   M +    P+VV Y  ++    +     EA  L ++M+ K  + N
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY  MI  +G   + E    L++ M ++G+ PN +TY  +I    K G LD A  L +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAG 379
           +++ +        Y+ +I  + +  +   +  LL E+ Q +T P  +     I  L +A 
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896

Query: 380 RIEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           R+E A  +  +   F A  V   S +  +IE      K     ++F +M   G  P+
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 247/574 (43%), Gaps = 44/574 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   +L+ +  E  Y PS   +N ++     +     A+ L  +M + G  P    Y+ L
Sbjct: 355 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 61  I--TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS-NLIELARKLSD---YSKAISIFSR 114
           I   C  K+ +    +   ++   + ++  +VL   N+    R L     Y KA S+   
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +   G +PD   Y+ ++N    A   + A LL EEM+  G+  D  +Y+ +++ + +   
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +A   F EM EV C  ++ T   +I  Y +      A+ LF +M   G  P++V+Y+ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 235 LLRVYGEAELFGEAIHLF-RLMQRKEIEQ---------------NVVTYNTMIKIYGKSL 278
           L+  + +A    +A  +F R+   K++                 NVVTY  ++  + KS 
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E+A  L+  M   G EPN I Y  +I    K GKLD A  +  ++   G       Y 
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I  Y +V     A ++L ++ +    PN +     I  L + G+ +EA  + +   + 
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   ++  +  MI+ F    K    +E+ E+M S G  P+     ++++   K    + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLS------LYGARKDFNMLESLFERLDSDSNINKKELH 508
            +L  EM+        Q H+   +      + G  K+F     L + +  D       ++
Sbjct: 834 HNLLEEMK--------QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVY 885

Query: 509 HVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            ++     +A RL  A R++  +    TF+++LV
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEV---ATFSATLV 916



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 197/470 (41%), Gaps = 29/470 (6%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   + +A      ++     P R TY+ LI  F K    DSA    ++M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D            K+  + +A+++   +++   VPD V Y  +I+   +A LF+E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+ V+YSTLL   +   +      V   M    C       N ++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGE-----AELFGEAIHLFRLMQ 256
            Y        A +L   M K G  P  V YN L+  + G+      +L   A   +  M 
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N +  ++  +    + ++EKA ++++EM  +G  P+  TYS ++     A K++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A +LF++++  G+  D   Y  M+ ++ + GL+  A++  +E+R+    PN +     I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A ++  A  +F      G + +I  +  +I+   +  +     ++FE+M  +   
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 433 PDSHI----------------IALVLNSYGKLREFETADDLYSEMQEEGC 466
           PD  +                   +L+ + K    E A  L   M  EGC
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 217/523 (41%), Gaps = 67/523 (12%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +D++N     S  P+V  Y+ +L   L  KQ      + + M   G  P    +++L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI--------ELARKLSDYSKAISIFSRL 115
           +   G    A   L++M +       V+Y+ LI         L   L D ++    +S +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE--KAYSEM 439

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            ++G+V + +  ++       A  +++A  +I EM  QG  PDT +YS +LN      K 
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             A  +F EM       D+ T  IM+D + +  + + A + F  MR++G  P        
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP-------- 551

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
                                      NVVTY  +I  Y K+ +   A  L + M + G 
Sbjct: 552 ---------------------------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID--------------P--VLYQT 339
            PN +TYS +I    KAG++++A  +F+++  S    D              P  V Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  + +   V  A++LL  +     +PN I  +  I  L + G+++EA  V  +  + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               +  +  +I+ + + K+     +V  KM      P+  I   +++   K+ + + A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            L   M+E+GC  +   +  M+  +G          L ER+ S
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 187/464 (40%), Gaps = 44/464 (9%)

Query: 76  WLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +LQQ+  D   V G+ +  + L+    +   +S A+    RLK     P    YN +I  
Sbjct: 187 FLQQIRDDDKEVFGEFL--NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 244

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F KA     A L+  EM    ++ D  +         +  K+ EAL++    N V    D
Sbjct: 245 FLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---D 301

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                 +I    +  + ++A      MR     P+VV+Y+TLL      +  G    +  
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKA 312
           +M  +    +   +N+++  Y  S +H  A  L+++M   G  P  + Y+ +I +I G  
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421

Query: 313 GKL-----DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             L     D A   + ++ ++GV    VL +  + ++ R                     
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGV----VLNKINVSSFTRC-------------------- 457

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                  L  AG+ E+A  V R+    G + D S +  ++       K      +FE+M+
Sbjct: 458 -------LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G   D +   ++++S+ K    E A   ++EM+E GC  +   +  ++  Y   K  +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               LFE + S+  +     +  +   + +A ++  A +I  RM
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 35/311 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  +++ Y+ ++    + K+ +LA  +  +M +   AP+   Y+ +I    K G  D
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +Q ME+     ++V Y+ +I+    +      + +  R+ S G+ P+ V Y  +I
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L+EEM++      T  Y  ++  +  N +F+E+L +  E+ + +  
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 879

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L+   ++ID     ++ K A RL  ++R +     V +++  L  Y            
Sbjct: 880 PFLSVYRLLID-----NLIK-AQRLEMALRLL---EEVATFSATLVDYSS---------- 920

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                         TYN++I+    + + E A  L  EM  +G+ P   ++ ++I    +
Sbjct: 921 --------------TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966

Query: 312 AGKLDRAAMLF 322
             K+  A +L 
Sbjct: 967 NSKISEALLLL 977



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 8/181 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y  ++       + E    L + M  +G+AP+  TY  LI    K G  
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A + L++M+Q         Y  +IE   K  ++ +++ +   +      P L  Y  +
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLL 888

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN----HKFVEALSVFAEMN 186
           I+   KA+  + A  L+EE+         V YS+  N  +E+    +K   A  +F+EM 
Sbjct: 889 IDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 187 E 187
           +
Sbjct: 947 K 947



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   Y V++ +  +    ++AH L +EM+Q         Y  +I  F KE  F  ++ 
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLG 868

Query: 76  WLQQMEQDRVSGDLVLY----SNLIELAR----------------KLSDYSK-------- 107
            L ++ QD  +  L +Y     NLI+  R                 L DYS         
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928

Query: 108 ---------AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
                    A  +FS +   G++P++ ++ ++I    +     EA LL++
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978


>gi|219884651|gb|ACL52700.1| unknown [Zea mays]
          Length = 716

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+       +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 167 KSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYS 226

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   F  A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 227 TLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARG 286

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 287 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 346

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM +     +  T   +  +YG+    +DA +L+  MR++ +    +  NTLL 
Sbjct: 347 ARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLS 406

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L  EA  LF  M+  E     + +  +Y  MI IYG + + + A  L  EM   
Sbjct: 407 MCADVGLVAEAEQLFNEMKGPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEMLKG 466

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKA ++ +A  + +     G++ D
Sbjct: 467 GIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPD 506



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+ + L++  +G  P D + +N  +     A+ +  A  L  +M + GV  D ++
Sbjct: 165 WRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNIT 224

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 225 YSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRA 284

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 285 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 344

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM ++G+EPNA T + +  I+G+A     A  L+ K+R   +  D +L  T+
Sbjct: 345 GLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTL 404

Query: 341 IVAYERVGLVAHAKRLLHELRQPNT--IPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLVA A++L +E++ P    +P+         I I    G  + A  +F +  
Sbjct: 405 LSMCADVGLVAEAEQLFNEMKGPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML 464

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
             G   +I  +  +I+   + ++    +EV E     G  PD  +   +L+
Sbjct: 465 KGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 116/242 (47%), Gaps = 10/242 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM  +G+ P+  T + L   +G+     
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGR 380

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+    +M + ++  D +L + L+ +   +   ++A  +F+ +K         PD  +Y
Sbjct: 381 DALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKGPECRDVPKPDKWSY 440

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G       A  L  EM + G++P+ +SY+ ++    +  +  +A+ V     E
Sbjct: 441 TAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLE 500

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D   C  ++ V   L   ++ + +  S+ K  ++ ++V    L+RV G+A++ G+
Sbjct: 501 KGLKPDDRLCGCLLSVIA-LSSGEEMEMVLSSLEK--VNQNLVK---LIRVLGDAQVGGD 554

Query: 248 AI 249
            I
Sbjct: 555 DI 556



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/354 (19%), Positives = 144/354 (40%), Gaps = 37/354 (10%)

Query: 149 EMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           + + QG  P       LLN L+    K +  L+    +     PLD    N+ +      
Sbjct: 141 QQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAA 200

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVT 266
                A+RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VT
Sbjct: 201 RQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVT 260

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y+ ++ +Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R
Sbjct: 261 YSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMR 320

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
             G++ +  +Y  ++ A  + G    A+ L  E+      P    +T LA+         
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAK--------- 371

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
                                 ++ R +   + +++++KMR      DS +   +L+   
Sbjct: 372 ----------------------IYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCA 409

Query: 447 KLREFETADDLYSEMQEEGC---VFSDQVHFQ-MLSLYGARKDFNMLESLFERL 496
            +     A+ L++EM+   C      D+  +  M+++YG+  D +    LF  +
Sbjct: 410 DVGLVAEAEQLFNEMKGPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEM 463



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 102/227 (44%), Gaps = 7/227 (3%)

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILAR 377
            + L +    +D + +   + +        HA+RL  ++       + I   T IT   R
Sbjct: 175 LRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARR 234

Query: 378 AGRIEEATWVFRQAFDA-GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             +  +A   F + + A G + D   +  +++++++      V+ +F++ R +G+ PD  
Sbjct: 235 CRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHV 294

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A++   +G+  +++    ++ EM+E G   +  V+  +L   G      +  +LFE +
Sbjct: 295 AFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM 354

Query: 497 -DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            D     N + L   +A IY RA    DA ++ ++M + +    S++
Sbjct: 355 IDQGVEPNARTL-TALAKIYGRARWGRDALQLWDKMRELKLPADSIL 400


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 237/537 (44%), Gaps = 5/537 (0%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+++ LD +++       +FAY+ +L ++ R          +  M   G+ P+   Y+ +
Sbjct: 333 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 391

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    K+G    A + ++++ +  +S D   Y+++I    +  D   A+ +F+++   G 
Sbjct: 392 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+ V Y+T+IN    +    EA  LI EM   G+ P   + +  +    +   + +A  
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +F +M    C  ++ T   +I       + K A  LF  M + G+ P+ V+YN L+ +  
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           E      A  +  LM R  +  N+VTYN MIK Y    + +KA  +M  M  RG   N +
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 631

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+TII  +  +G    A  +   +R  G + D   Y  +I  + ++  +  A  L +E+
Sbjct: 632 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 361 RQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
                 P E   T L     +  +++ AT +      +G   ++  +  +I   ++   +
Sbjct: 692 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
           +   E+ + M   G FP+      +++   K      A +++++M E+GC+ +   +  +
Sbjct: 752 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           +   G        E+LF  L+    I  +  +  +   Y  + ++  A   + RM K
Sbjct: 812 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 199/459 (43%), Gaps = 4/459 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+  SP  F Y  ++    R    + A  +F++M + G  P+  TYSTLI      G  +
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 472

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +++M    +       +  I     +  Y  A  +F  +K+ G  P++  Y  +I
Sbjct: 473 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 532

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +    + L K A  L   M   GV P+TV+Y+ L+N+ VEN +   A  V   M      
Sbjct: 533 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLF 592

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T N MI  Y  L   K A  +  +M + G   ++V+YNT+++ Y ++     A+ +
Sbjct: 593 TNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 652

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             LM+    + +  +Y  +I  + K  + E A  L  EM + G+ PN +TY+ +I  + K
Sbjct: 653 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 712

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER----VGLVAHAKRLLHELRQPNTIP 367
             KLD A  L + ++ SG   +   Y  +I    +     G     K ++ E   PN + 
Sbjct: 713 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G    A  +F +  + G + ++  +  +I    +  K      +F ++ 
Sbjct: 773 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             G  PD      ++ +Y    + E A +    M + GC
Sbjct: 833 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 202/455 (44%), Gaps = 41/455 (9%)

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           +C  KE M  + +S+L  + Q  +   L  YS L+    +L   +  +  + R+ S G+ 
Sbjct: 324 SCHSKEAMART-MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQ 382

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+L+ YN +IN   K     +A  +++++ E  + PDT +Y++++  +   H    AL V
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442

Query: 182 FAEMNEVNCPLDLTTCNIMID-------------------VYGQLDMA------------ 210
           F +M +  C  +  T + +I+                   ++G L  A            
Sbjct: 443 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 502

Query: 211 ----KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
               +DA RLF  M+  G +P+V +Y  L+     + L   AI LF  M R  +  N VT
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           YN +I I  ++   + A  ++  M   G+  N +TY+ +I  +   G   +A ++   + 
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIE 382
             G   + V Y T+I  Y   G    A R+L  +R     P E + T L     +  ++E
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
            A  +F +  D G   +   +  +I+ + +++K      + E M+ +G  P+     +++
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +   K   F  A++L   M EEG +F + V +  +
Sbjct: 743 HGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYTAM 776



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 122/258 (47%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +S ++  YN +++    +     A  + D MR  G  PD ++Y+ LI  F K    +SA 
Sbjct: 626 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M  D +  + V Y+ LI+   K      A S+   +K SG  P++  YN +I+  
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K   F  A  L + M E+G+ P+ V+Y+ +++   +N     AL +F +M E  C  +L
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + +I   GQ    ++A+ LF  + + G+ P  ++Y  ++  Y  +     A +    
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865

Query: 255 MQRKEIEQNVVTYNTMIK 272
           M +   +  + TY  +IK
Sbjct: 866 MIKAGCQPTLWTYGVLIK 883



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 68/436 (15%)

Query: 5    ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
            ILD +  +    P  ++Y  ++    +  + E A GLF+EM   G+ P+  TY+ LI  +
Sbjct: 652  ILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710

Query: 65   GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
             K+   D+A S L+ M++     ++  Y+ LI    K +++S A  +   +   GI P++
Sbjct: 711  CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 770

Query: 125  VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
            V Y  MI+   K      A  +  +M EQG  P+ ++YS+L+    +  K  EA ++FAE
Sbjct: 771  VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 830

Query: 185  MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            +       D  T   MI+ Y      + A      M K G  P++ +Y  L++      L
Sbjct: 831  LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 890

Query: 245  FGEAIHLFRLMQRKEIEQN----------------------------VVTYNTMIKIYGK 276
              +     RL    ++  N                            V   N ++     
Sbjct: 891  LADQ----RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 946

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI---- 332
            +    +A  L+  M ++G+ P+   Y++++    +   +D A  +F+ + + G E+    
Sbjct: 947  AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 1006

Query: 333  -------------------------------DPVLYQTMIVAYERVGLVAHAKRLLHELR 361
                                           D V+   +I    R G        LH + 
Sbjct: 1007 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 1066

Query: 362  QPNTIPRETAITILAR 377
                +P     TILAR
Sbjct: 1067 TRRYMPSFHIYTILAR 1082


>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
 gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/556 (22%), Positives = 247/556 (44%), Gaps = 52/556 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG----LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P + ++N ++    RAK   LA G    L  E+RQ G+ PD  TY+TLI+   +    D 
Sbjct: 94  PDLVSFNTLINA--RAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDD 151

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++  ++M       DL  Y+ ++ +  +     +A  +F  L   G  PD V YN+++ 
Sbjct: 152 AVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLY 211

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K    +    + EE+ + G + D ++Y+T++++Y +  +   AL ++ EM  + C  
Sbjct: 212 AFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTP 271

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T  +++D  G++D   +A ++   M   G+ P++V+++ L+  Y ++    +A   F
Sbjct: 272 DAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTF 331

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M    ++ + + Y  M+ ++ +S E  K   L + M   G +P+   Y  ++A   K 
Sbjct: 332 DRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKG 391

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIV------------------------------ 342
            + D    + Q + +   E++P++  ++++                              
Sbjct: 392 NEHDEIEGVIQDMEAV-FEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSI 450

Query: 343 --AYERVGLVAHAKRLLHELRQ--PNT--IPRETAITILARAGRIEEATWVF--RQAFDA 394
             AYE++G       LL  +RQ  PN+  +  E +I +L + G+I +A   +  +Q    
Sbjct: 451 LDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKR 510

Query: 395 GEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           G   +D  ++  +I      + +    +VF  M+  G  P   I   ++ +  +L   ET
Sbjct: 511 GSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPET 570

Query: 454 ADDLYSEMQEEGCVFSD-QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK---ELHH 509
           A  L  +        +       M+  YG  K +   E+  + L  +S ++++    L H
Sbjct: 571 AYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIH 630

Query: 510 VVA--GIYERANRLND 523
             A  G+YE A  + D
Sbjct: 631 AYAESGLYEHARAIFD 646



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 206/431 (47%), Gaps = 4/431 (0%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W +    + P+V  +N ++    R+ +++ A  L D MR + I PD  +++TLI    K 
Sbjct: 50  WPHLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKS 109

Query: 68  GMFDS--AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           G   +  A+  L ++ Q  +  D + Y+ LI    + S+   A+++F  + +S   PDL 
Sbjct: 110 GCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLW 169

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN M++V G+    +EA L+ +E+ E+G +PD V+Y++LL  + +         V  E+
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            +     D  T N MI +YG++     A  L+  MR +G  P  V+Y  L+   G+ +  
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 289

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            EA  +   M    ++  +VT++ +I  Y KS   + A      M   G++P+ + Y  +
Sbjct: 290 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVM 349

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           + ++ ++ +  +  +L++ +   G + D  LYQ ++ A  +       + ++ ++     
Sbjct: 350 LDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE 409

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +      +IL +A  I +   + ++A   G   D      +++ + +  K+   + + E 
Sbjct: 410 MNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEW 469

Query: 426 MRSAGYFPDSH 436
           +R   + P+SH
Sbjct: 470 IRQ--HVPNSH 478



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE--A 178
           +P +  +N M+ V+ ++  F +AR L++ MR+Q ++PD VS++TL+N   ++       A
Sbjct: 58  LPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 117

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +  E+ +     D  T N +I    Q     DA  +F  M      P + +YN ++ V
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +G      EA  +F+ +  K  + + VTYN+++  + K  + E+   + +E+   G   +
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            ITY+T+I ++GK G+LD A  L+ ++R+ G   D V Y  ++ +  ++  ++ A ++L 
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297

Query: 359 ELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+     +P  +     I   A++GR ++A   F +  ++G   D   +  M+++F+R+ 
Sbjct: 298 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSD 357

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +   ++ ++  M   GY PD  +  ++L +  K  E +  + +  +M+
Sbjct: 358 ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 405



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 178/367 (48%), Gaps = 6/367 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +N ++     +  +E A  +FD M ++G  P   + + ++     +G  D     +Q++ 
Sbjct: 625 WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQEL- 683

Query: 82  QD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QD   ++S   VL   ++E   K  D  + + I++ +K++G +P++  Y  MI++    K
Sbjct: 684 QDLDIKISKSTVLL--MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 741

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F++  L++ EM   G KPD V  +TLL +Y     F   + V+  + E     D  T N
Sbjct: 742 RFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 801

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +I +Y +    ++   L + M K G+ P + SY  LL   G+A+L+ +A  LF  M+ K
Sbjct: 802 TLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTK 861

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
               N   Y+ M+KIY  +  H KA +L+  M+  GIEP   T   ++  +G +G  D A
Sbjct: 862 GYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEA 921

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             +   L+SS +EI  + Y T++ AY R    +     L E+++    P     T   RA
Sbjct: 922 EKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 981

Query: 379 GRIEEAT 385
             + E T
Sbjct: 982 ASLCEQT 988



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/455 (21%), Positives = 200/455 (43%), Gaps = 8/455 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS-TLITCFGKEGMFDSAIS 75
            PS   Y  ++    R    E A+ L D+  +  I+ +  +    +I  +GK  ++  A +
Sbjct: 550  PSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAEN 609

Query: 76   WLQQMEQDRVSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +++ ++Q+  SG D  +++ LI    +   Y  A +IF  +   G +P + + N M+   
Sbjct: 610  FVKGLKQE--SGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 667

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                   E  ++++E+++  +K    +   +L  + +     E + ++  M       ++
Sbjct: 668  IVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNM 727

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                IMI +       +D + +   M   G  P +V  NTLL +Y     F   I ++  
Sbjct: 728  HLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHS 787

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +    +E +  TYNT+I +Y ++   E+   L+ EM  RG+ P   +Y  ++A  GKA  
Sbjct: 788  ILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKL 847

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
             ++A +LF+++R+ G  ++  +Y  M+  Y      + A+ LL  +++    P    + I
Sbjct: 848  WEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 907

Query: 375  L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            L      +G  +EA  V      +        +  +++ + RN+ Y+  I    +M+  G
Sbjct: 908  LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 967

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              PD  +    + +     + + A  L   +Q+ G
Sbjct: 968  VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1002



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 154/340 (45%), Gaps = 6/340 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF--GEAIHLFRLM 255
           N M+ VY +     DA +L  +MR   I+P +VS+NTL+    ++     G A+ L   +
Sbjct: 65  NAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEV 124

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  +  + +TYNT+I    +    + A  + +EM      P+  TY+ ++++ G+ GK 
Sbjct: 125 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 184

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
             A ++F++L   G + D V Y +++ A+ + G V   +R+  EL +     + I   T 
Sbjct: 185 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 244

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + GR++ A  ++ +    G   D   +  +++   +  + +   +V E+M  AG 
Sbjct: 245 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 304

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P     + ++ +Y K    + A+  +  M E G       +  ML ++    +   L  
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L+  +  D       L+ V+     + N  ++   ++  M
Sbjct: 365 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/532 (20%), Positives = 232/532 (43%), Gaps = 25/532 (4%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +VF  N ++ + +  K   ++ G  L      +G  PD  +  +++  + K G  +  +S
Sbjct: 406 AVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLS 465

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR---LKSSGIVPDLVAYNTMIN 132
            L+ + Q   +   ++    I L  K      AI  +SR   LK      D   Y  +I 
Sbjct: 466 LLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLIT 525

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +A+LF EA  +  +M+  G+ P    Y +++           A  +  +    +  L
Sbjct: 526 YLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISL 585

Query: 193 DLTTCNI-MIDVYGQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           ++ +C + MI+ YG+L + + A+     +++  G+D  +  +N L+  Y E+ L+  A  
Sbjct: 586 NILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRI--WNALIHAYAESGLYEHARA 643

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F +M +K     V + N M++        ++   ++QE+Q+  I+ +  T   ++  + 
Sbjct: 644 IFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFA 703

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR------LLHELR--- 361
           KAG +     ++  ++++G   +  LY+ MI       L+ H KR      ++ E+    
Sbjct: 704 KAGDVFEVMKIYNGMKAAGYLPNMHLYRIMI------SLLCHNKRFRDVELMVAEMEGAG 757

Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
            +P+ +   T + +    G  +    V+    +AG   D   +  +I ++SRN +     
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            +  +M   G  P      ++L + GK + +E AD L+ EM+ +G   +  ++  M+ +Y
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877

Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
              ++ +  E L   +  D         H++   Y  +   ++A +++N + 
Sbjct: 878 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLK 929



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 141/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P+ + Y  +I+       F      + +ME      DLV+ + L+ +  
Sbjct: 714  IYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYT 773

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               ++ + I ++  +  +G+ PD   YNT+I ++ +    +E   L+ EM ++G+ P   
Sbjct: 774  GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLE 833

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            SY  LL    +   + +A  +F EM      L+ +  ++M+ +Y        A+ L  +M
Sbjct: 834  SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 893

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG +    EA  +   ++   +E + + Y+T++  Y ++ ++
Sbjct: 894  KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDY 953

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                  + EM+  G+EP+   +++ I       + D A +L + L+  G ++
Sbjct: 954  SLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDL 1005



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E A + P +   N +L        ++    ++  + + G+ PD  TY+TLI  + +    
Sbjct: 754  EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   + L +M +                                    G+ P L +Y  +
Sbjct: 814  EEGFTLLYEMGK-----------------------------------RGLTPKLESYKIL 838

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            +   GKAKL+++A LL EEMR +G + +   Y  ++ +Y       +A  + + M E   
Sbjct: 839  LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGI 898

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
               + T +I++  YG      +A+++  S++   ++ S + Y+T+L  Y     +   I 
Sbjct: 899  EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGIT 958

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                M+R  +E +   + + I+      + + A  L++ +Q+ G +
Sbjct: 959  KLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1004


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 211/463 (45%), Gaps = 17/463 (3%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P+   YNV++R   +  Q   A  +F +M+  G+ P+  T +TL+    + G   SA+
Sbjct: 28  FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87

Query: 75  SWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              ++M+          ++ L+    +A ++ D   A++    ++ S        YN ++
Sbjct: 88  KLFREMQAGPFLPTSASHNILLRGFFMAGRVRD---ALAHLQDMRKSSSSVATGTYNLVL 144

Query: 132 NVFG----KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
                    A   ++A    +EM+  GV+PD  SY  LL+   ++ +  EA ++F+ M  
Sbjct: 145 KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM-- 202

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
             C  D+ T N+++D Y ++    +A  L   + K G +P+V +Y+ ++  Y + +   E
Sbjct: 203 -TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII- 306
           A  +F  M       N VT+NT+I  + K+   E A  L  EM+  G +   +TY+T+I 
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---QP 363
           ++  K G +  A  LF KL  +G+    V Y ++I  +     ++ A +   E+     P
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP 381

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N I     I  L +  R++EA          G    +  +G +I  F +  +  + +  F
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           EKM+ AG  P++ I   +++   K         L   M  EGC
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGC 484



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 201/428 (46%), Gaps = 13/428 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEG 68
           +   + P+  ++N++LR    A +   A     +MR+   +    TY+ ++   C+  + 
Sbjct: 94  QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKS 153

Query: 69  M--FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
               + A+ + ++M+   V  DL  Y  L+         ++A ++FS +  S   PD++ 
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMT 210

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           YN +++ + K     EA+ L++E+ + G +P+  +YS ++N Y +  K  EA  VF +M 
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELF 245
           E NC  +  T N +I  + +  M +DA +LF  M K+G   ++V+YNTL+  +  +    
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A+ LF  ++   +   +VTYN++I+ +  +    +A     EM+ +   PN ITYS +
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSIL 389

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---- 361
           I    K  ++  AA   + +++ G     V Y  +I  + + G +  A     +++    
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            PNT+   T I  L +A R  +   +       G   D+  + C+I       +  +   
Sbjct: 450 APNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 509

Query: 422 VFEKMRSA 429
           +F+ M  A
Sbjct: 510 LFDGMACA 517



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +P++  YN +++    A++   A   FDEM  +  AP+  TYS LI    K    
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRM 399

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L+ M+    +  +V Y  LI    K  +   A+  F ++K +G  P+ V +NT+
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTL 459

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   KA+   +   L+  M  +G KPD ++Y+ L++     ++  +A  +F  M    C
Sbjct: 460 IDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---AC 516

Query: 191 PLDLTTCNIMI 201
             ++TT N +I
Sbjct: 517 APNVTTFNFLI 527



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E + +P+V  Y++++  + + ++ + A    ++M+  G  P   TY  LI  F K G   
Sbjct: 376 EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELK 435

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           SA+ + ++M+    + + V+++ LI+   K    +  + +   + + G  PD++ YN +I
Sbjct: 436 SALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLI 495

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           +    A   ++A+ L + M      P+  +++ L+       K  EA ++ 
Sbjct: 496 SGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 207/440 (47%), Gaps = 17/440 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+VF +N+V+  + +  +   A  LF  M++ G  PD  T+++LI  +GK G  D    
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++M +     D+V Y+ LI    K      A   F+ +K  G++ ++V ++T ++ F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L +EA  L  +MR +G+  +  +Y+ L++   +  +  +A+ +  EM     PL++ 
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T  +++D   +     +A+ +   M K G+  + + Y TL+  +   +   +A+ L   M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           + K +E ++  Y  +I+      + ++A +L+ +M   G+EPN I Y+T++    K+GK+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  + QK+  SG + +              G +  A +L +E+        +   T L
Sbjct: 485 PEAIAMLQKILDSGFQPNN-------------GCLNEAVQLFNEMVHKGMSLDKVVYTAL 531

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                + G + +A  +  +  D+G   D+  + C I  F          EVF +M   G 
Sbjct: 532 LDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 591

Query: 432 FPDSHIIALVLNSYGKLREF 451
            PD  +   ++    ++RE 
Sbjct: 592 APDRAVYNCLITQIPEIREL 611



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 4/324 (1%)

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L+  + EQ   P+  +++ +++   +  +  EA S+F+ M E+ C  D+ T N +ID YG
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     + ++L   MR+ G    VV+YN L+  + +      A   F  M+R+ +  NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           T++T +  + K     +A  L  +M+ RG+  N  TY+ +I    KAG+LD A +L  ++
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRI---- 381
              GV ++ V Y  ++    +   VA A+ +L  + +      E   T L     +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
           E+A  +  +  + G   DIS++G +I+      K      +  KM  +G  P+  I   +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 442 LNSYGKLREFETADDLYSEMQEEG 465
           +++  K  +   A  +  ++ + G
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSG 498



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 155/324 (47%), Gaps = 17/324 (5%)

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD-ADRLFWSMRK 222
           TLL++  +     +A+   A + E+  P +  TCN ++     L +A+D + RL   + +
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL-----LRLARDRSGRLVRRLFE 181

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
               P+V ++N ++    +     EA  LF  M+      +VVT+N++I  YGK  E ++
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
              L++EM+  G + + +TY+ +I  + K G+++ A   F  ++  GV  + V + T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVK 398
           A+ + GLV  A +L  ++R       E   T L     +AGR+++A  +  +    G   
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           ++  +  +++   + +K A   +V   M  AG   +  +   +++ +   +  E A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGA 482
           SEM+ +G           +SLYGA
Sbjct: 422 SEMKNKGLELD-------ISLYGA 438



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 13/226 (5%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+A    +   Y  ++      K  E A GL  EM+ +G+  D   Y  LI         
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A S L +M++  +  + ++Y+ +++   K     +AI++  ++  SG  P+    N  
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN----NGC 505

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N         EA  L  EM  +G+  D V Y+ LL+ Y++     +A ++ A+M +   
Sbjct: 506 LN---------EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 556

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            LDL      I  +  L+M  +A  +F  M   GI P    YN L+
Sbjct: 557 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 8/237 (3%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           +TLL V  +  L  +A+     ++   +  N  T N ++      L  +++  L++ +  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILL----RLARDRSGRLVRRLFE 181

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           +   PN  T++ +I    K G+L  A  LF +++  G   D V + ++I  Y + G +  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 353 AKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
            ++L+ E+R    + + +     I    + GR+E A   F      G + ++  F   ++
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            F +       +++F +MR  G   +      +++   K    + A  L  EM  +G
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 12/156 (7%)

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           L RAA+     RS+   +      T++      GL+  A R +  +R+    PNT    T
Sbjct: 107 LHRAALALGPRRSALASV----VDTLLSVLADRGLLDDAVRAVARVRELRVPPNT---RT 159

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
              IL R  R + +  + R+ F+     ++  F  +I+   +  + A    +F +M+  G
Sbjct: 160 CNHILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             PD      +++ YGK  E +  + L  EM+  GC
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254


>gi|212274745|ref|NP_001130291.1| uncharacterized protein LOC100191385 [Zea mays]
 gi|194688762|gb|ACF78465.1| unknown [Zea mays]
 gi|223949231|gb|ACN28699.1| unknown [Zea mays]
 gi|414874010|tpg|DAA52567.1| TPA: salt-inducible protein [Zea mays]
          Length = 716

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +S+++L W+       +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 167 KSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYS 226

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   F  A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 227 TLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARG 286

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  +   + + +EMRE G+KP+   Y+ LL    +  K   
Sbjct: 287 SGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGL 346

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM +     +  T   +  +YG+    +DA +L+  MR++ +    +  NTLL 
Sbjct: 347 ARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLS 406

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L  EA  LF  M+  E     + +  +Y  MI IYG + + + A  L  EM   
Sbjct: 407 MCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEMLKG 466

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKA ++ +A  + +     G++ D
Sbjct: 467 GIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPD 506



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 173/351 (49%), Gaps = 12/351 (3%)

Query: 105 YSKAISIFSRLKS--SGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           + K++S+ + L++  +G  P D + +N  +     A+ +  A  L  +M + GV  D ++
Sbjct: 165 WRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNIT 224

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           YSTL+       +F +A+  F  M   +  L D  T + ++DVY QL M ++   LF   
Sbjct: 225 YSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRA 284

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           R  G  P  V++  L +++GEA  +     +F+ M+   I+ N+  YN +++  GK+ + 
Sbjct: 285 RGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKP 344

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A NL +EM ++G+EPNA T + +  I+G+A     A  L+ K+R   +  D +L  T+
Sbjct: 345 GLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTL 404

Query: 341 IVAYERVGLVAHAKRLLHELRQPNT--IPRE------TAITILARAGRIEEATWVFRQAF 392
           +     VGLVA A++L +E++ P    +P+         I I    G  + A  +F +  
Sbjct: 405 LSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML 464

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
             G   +I  +  +I+   + ++    +EV E     G  PD  +   +L+
Sbjct: 465 KGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLS 515



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 116/242 (47%), Gaps = 10/242 (4%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM  +G+ P+  T + L   +G+     
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGR 380

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+    +M + ++  D +L + L+ +   +   ++A  +F+ +K         PD  +Y
Sbjct: 381 DALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDVPKPDKWSY 440

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G       A  L  EM + G++P+ +SY+ ++    +  +  +A+ V     E
Sbjct: 441 TAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLE 500

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D   C  ++ V   L   ++ + +  S+ K  ++ ++V    L+RV G+A++ G+
Sbjct: 501 KGLKPDDRLCGCLLSVIA-LSSGEEMEMVLSSLEK--VNQNLVK---LIRVLGDAQVGGD 554

Query: 248 AI 249
            I
Sbjct: 555 DI 556



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/354 (19%), Positives = 145/354 (40%), Gaps = 37/354 (10%)

Query: 149 EMREQGVKPDTVSYSTLLN-LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           + + QG  P       LLN L+    K +  L+    +     PLD    N+ +      
Sbjct: 141 QQQGQGAAPSPSDALLLLNYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAA 200

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVT 266
                A+RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VT
Sbjct: 201 RQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVT 260

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y+ ++ +Y +    E+   L    +  G +P+ + ++ +  ++G+AG  D    +F+++R
Sbjct: 261 YSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMR 320

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
             G++ +  +Y  ++ A  + G    A+ L  E+      P    +T LA+         
Sbjct: 321 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAK--------- 371

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
                                 ++ R +   + +++++KMR      DS +   +L+   
Sbjct: 372 ----------------------IYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCA 409

Query: 447 KLREFETADDLYSEMQEEGC---VFSDQVHFQ-MLSLYGARKDFNMLESLFERL 496
            +     A+ L++EM++  C      D+  +  M+++YG+  D +    LF  +
Sbjct: 410 DVGLVAEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEM 463



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 102/227 (44%), Gaps = 7/227 (3%)

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILAR 377
            + L +    +D + +   + +        HA+RL  ++       + I   T IT   R
Sbjct: 175 LRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARR 234

Query: 378 AGRIEEATWVFRQAFDA-GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
             +  +A   F + + A G + D   +  +++++++      V+ +F++ R +G+ PD  
Sbjct: 235 CRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHV 294

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
             A++   +G+  +++    ++ EM+E G   +  V+  +L   G      +  +LFE +
Sbjct: 295 AFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM 354

Query: 497 -DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            D     N + L   +A IY RA    DA ++ ++M + +    S++
Sbjct: 355 IDQGVEPNARTL-TALAKIYGRARWGRDALQLWDKMRELKLPADSIL 400


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 230/514 (44%), Gaps = 42/514 (8%)

Query: 5   ILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + D++NE +   +  S+++ N +L  + + +  E A  L+ +M   GI P   T++TLI 
Sbjct: 189 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 248

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K+G    A   L Q+ Q  +S D+  Y++LI    +  +   A  +F R+   G  P
Sbjct: 249 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 308

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + V Y+T+IN         EA  ++EEM E+G++P   +Y+  +          EA+ + 
Sbjct: 309 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           A M +  C  ++ T   +I    +L   + A  L+  M K G+ P+ V+YN L+      
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 428

Query: 243 ELFGEAIHLFRLMQRK--------------------EIEQ---------------NVVTY 267
             F  A+ +F  M+                      +IE+                VVTY
Sbjct: 429 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 488

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT+I  Y        A  L+  M+  G EP+  TY+ +++ + K GKL+ A+  FQ++  
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 548

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+  +PV Y T+I  + + G V  A  LL  + +    PN       I  L++  R  E
Sbjct: 549 CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSE 608

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +  +  + G + ++  +  +I+   RN +     ++F  M      P+ +  + ++ 
Sbjct: 609 AEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              +  + + A+ L  EM+ +G +  D+V F  L
Sbjct: 669 GLCQEGKADEAEILLKEMERKG-LAPDEVTFTSL 701



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 218/474 (45%), Gaps = 37/474 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++   L       A  L D M++ G  PD +TY+ L++ F K G  +SA  +
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+M +  ++ + V Y+ LI+   K      A+S+  R++  G  P++ +YN +IN   K
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              F EA  + ++M EQG+ P+ ++Y+TL++    N +   A  +F +M +  C  +L T
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +I    Q   A +A+ L   M + G+ P  V++ +L+  +    + G   H F L++
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF---VVLGRIDHAFLLLR 719

Query: 257 RK---EIEQNVVTYNTMIKIYGKSL------------------EHEK------ATNLMQE 289
           R      + N  TY+ ++K   K                     HEK       +NL+  
Sbjct: 720 RMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLAR 779

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   G EP   TYST+++   + G+   A  L + ++  G   D  +Y ++++A+ +   
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839

Query: 350 VAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           V HA ++ H +     Q +       I  L +AG++EEA  +F    +     D  V+  
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSH---IIALVLNSYGKLREFETADD 456
           +++   +  +    +++   M S  + P+     I+   L+  GK  E E   D
Sbjct: 900 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLAD 953



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 229/499 (45%), Gaps = 45/499 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAI 74
           P+V  Y  ++  + R  + E+A GL+ +M + G+ P+  TY+ LI   C G  G F +A+
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG--GRFSTAL 435

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                ME      +   Y+ +I+      D  KA+ +F ++   G +P +V YNT+IN +
Sbjct: 436 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 495

Query: 135 -GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             K  +   ARLL + M+E G +PD  +Y+ L++ + +  K   A   F EM E     +
Sbjct: 496 LTKGNVNNAARLL-DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             +   +ID + +      A  L   M +MG +P+V SYN ++    +   F EA  +  
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  + +  NV+TY T+I    ++   + A  +  +M+ R   PN  TYS++I    + G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           K D A +L +++   G+  D V + ++I  +  +G + HA  LL  +      P     +
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYS 734

Query: 374 ILARAGR-----IEEATWVFRQA---FDAGEVKDI------------SVFGC-------- 405
           +L +  +     +EE   V  +A   F   E KD+            S  GC        
Sbjct: 735 VLLKGLQKECLLLEEKVAVQHEAVYSFSPHE-KDVNFEIVSNLLARMSEIGCEPTLDTYS 793

Query: 406 -MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            ++    R  ++    ++ + M+  G+ PD  I   +L ++ K  E + A  ++  ++ +
Sbjct: 794 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853

Query: 465 GCVFSDQVHFQM-LSLYGA 482
           G        FQ+ LS+Y A
Sbjct: 854 G--------FQLHLSIYRA 864



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/560 (22%), Positives = 222/560 (39%), Gaps = 98/560 (17%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF Y  ++    R +  +LA G+FD M + G  P+  TYSTLI     EG  D A+ 
Sbjct: 272 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 331

Query: 76  WLQQMEQDRVSG-----------------------------------DLVLYSNLIELAR 100
            L++M +  +                                     ++  Y+ LI    
Sbjct: 332 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 391

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN---VFGK----AKLF------------- 140
           +L     AI ++ ++   G+VP+ V YN +IN   V G+     K+F             
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451

Query: 141 ---------------KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                          ++A +L E+M + G  P  V+Y+TL+N Y+       A  +   M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E  C  D  T N ++  + +    + A   F  M + G++P+ VSY TL+  + +    
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A+ L   M+      NV +YN +I    K     +A  +  +M  +G+ PN ITY+T+
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I    + G+   A  +F  +       +   Y ++I    + G    A+ LL E+ +   
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 366 IPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIE------------- 408
            P E   T L       GRI+ A  + R+  D G   +   +  +++             
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 409 --------LFSRNKKYAN---VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
                    FS ++K  N   V  +  +M   G  P     + +++   +   F  A+ L
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811

Query: 458 YSEMQEEGCVFSDQVHFQML 477
             +M+E G     ++++ +L
Sbjct: 812 VKDMKERGFCPDREIYYSLL 831



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 219/480 (45%), Gaps = 20/480 (4%)

Query: 64  FGKEGMFDSAISWLQQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           F K  M +  IS L ++ +DRV    D +    +I+  R   +  +     + +   G  
Sbjct: 145 FYKHNM-NCFISMLNRLVRDRVFAPADHIRIL-MIKACRNEEEIRRVADFLNEISGMGFG 202

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
             L + NT++    K ++ + AR L ++M   G++P  ++++TL+N+  +  K  EA  +
Sbjct: 203 FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 262

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            +++ + +   D+ T   +I  + +   LD+A     +F  M K G DP+ V+Y+TL+  
Sbjct: 263 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG---VFDRMVKEGCDPNSVTYSTLING 319

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
                   EA+ +   M  K IE  V TY   I         E+A  L+  M+ RG  PN
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ +I+   + GKL+ A  L+ K+   G+  + V Y  +I      G  + A ++ H
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            +       NT      I  L   G IE+A  +F +    G +  +  +  +I  +    
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              N   + + M+  G  PD      +++ + K  + E+A   + EM E G +  + V +
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG-LNPNPVSY 558

Query: 475 QMLSLYGARKD--FNMLESLFERLDS-DSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             L + G  KD   ++  SL ER++    N N +  + V+ G+  + NR ++A +I ++M
Sbjct: 559 TTL-IDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL-SKENRFSEAEKICDKM 616



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 59/391 (15%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P+V +YN V+  + +  ++  A  + D+M ++G+ P+  TY+TLI    + G  
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A      ME+ +   +L  YS+LI    +     +A  +   ++  G+ PD V + ++
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN------LYVE-----NHKFVEAL 179
           I+ F        A LL+  M + G KP+  +YS LL       L +E      H+ V + 
Sbjct: 702 IDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761

Query: 180 S-------------VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
           S             + A M+E+ C                                   +
Sbjct: 762 SPHEKDVNFEIVSNLLARMSEIGC-----------------------------------E 786

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P++ +Y+TL+        F EA  L + M+ +    +   Y +++  + K+LE + A  +
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
              ++ +G + +   Y  +I    KAG+++ A  LF  +       D +++  ++    +
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            G +    +LLH +   N  P      IL R
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGR 937


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 196/395 (49%), Gaps = 6/395 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V++  +V+  + R  + E +  L  E   +GI P+ YTY+T+I  + K+  F      L
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M++D V  + V Y+ L+EL+ K    S A  +F  ++  GI  D+  Y ++I+   + 
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              K A LL +E+ E+G+ P + +Y  L++   +  +   A  +  EM      +     
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH-LFRLMQ 256
           N +ID Y +  M  +A  ++  M + G    V + NT+   +   + + EA   LFR+M+
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ + V+Y  +I +Y K    E+A  L  EM ++G++PNAITY+ +I  + K GK+ 
Sbjct: 463 -GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
            A  L   + ++G++ D   Y ++I        V  A RL  E+       N++     I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
           + L++AG+ +EA  ++ +    G   D  V+  +I
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 164/346 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  + YN ++   ++ + +    G+   M++ G+  ++ TY+ L+    K G    A   
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  +  D+ +Y++LI    +  +  +A  +F  L   G+ P    Y  +I+   K
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A +L+ EM+ +GV    V ++TL++ Y       EA  ++  M +     D+ T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
           CN +   + +L    +A +  + M + G+  S VSY  L+ VY +     EA  LF  M 
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K ++ N +TYN MI  Y K  + ++A  L   M+  G++P++ TY+++I     A  +D
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
            A  LF ++   G++ + V Y  MI    + G    A  L  E+++
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 204/462 (44%), Gaps = 8/462 (1%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           ++V R  +    +E    +FD M ++G++ D  +    +    K    D  +   ++M  
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             V   +   + ++E   +  +  K+  +       GI P+   YNT+IN + K + F  
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
              +++ M++ GV  + V+Y+ L+ L V+N K  +A  +F EM E     D+     +I 
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
              +    K A  LF  + + G+ PS  +Y  L+    +    G A  L   MQ K +  
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
             V +NT+I  Y +    ++A+ +   M+ +G + +  T +TI + + +  + D A    
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
            ++   GV++  V Y  +I  Y + G V  AKRL  E+     QPN I     I    + 
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMI--ELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           G+I+EA  +       G   D   +  +I  E  + N   A  + +F +M   G   +S 
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA--MRLFSEMGLKGLDQNSV 575

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
              ++++   K  + + A  LY EM+ +G    ++V+  ++ 
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 36/307 (11%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  + D + E+   SPS + Y  ++  V +  +   A  L +EM+ +G+   +  ++TL
Sbjct: 347 RAFLLFDELTEKG-LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  + ++GM D A      MEQ     D+   + +     +L  Y +A     R+   G+
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
               V+Y  +I+V+ K    +EA+ L  EM  +GV+P+ ++Y+ ++  Y +  K      
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI----- 520

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
                                         K+A +L  +M   G+DP   +Y +L+    
Sbjct: 521 ------------------------------KEARKLRANMEANGMDPDSYTYTSLIHGEC 550

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
            A+   EA+ LF  M  K ++QN VTY  MI    K+ + ++A  L  EM+ +G   +  
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610

Query: 301 TYSTIIA 307
            Y+ +I 
Sbjct: 611 VYTALIG 617



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 167/424 (39%), Gaps = 69/424 (16%)

Query: 108 AISIFSRLKS--SGIVPDLVAYNTMINVFGKAKLFKEARLL-------------IEEMRE 152
            I  F  L+   S + PDL A  T+ +     + F E R L             +EE+  
Sbjct: 79  CIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGS 138

Query: 153 QGVKPD---------TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC------ 197
             V  D            +  +  +YV+N  F E L VF  M +    +D  +C      
Sbjct: 139 AMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA 198

Query: 198 --------------------NIMIDVY------------GQLDMAKDADRLFWSMRKMGI 225
                                + I VY            G+++ +K   +L       GI
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSK---KLIKEFSVKGI 255

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P   +YNT++  Y +   F     + ++M++  +  N VTY  ++++  K+ +   A  
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           L  EM+ RGIE +   Y+++I+   + G + RA +LF +L   G+      Y  +I    
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375

Query: 346 RVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           +VG +  A+ L++E++        +   T I    R G ++EA+ ++      G   D+ 
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
               +   F+R K+Y    +   +M   G    +     +++ Y K    E A  L+ EM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495

Query: 462 QEEG 465
             +G
Sbjct: 496 SSKG 499



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 82/405 (20%), Positives = 160/405 (39%), Gaps = 59/405 (14%)

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNE--------------VNCPLDLTT 196
           E  +KPD  +  TL +    N +F E  S+  + +N+              V+C +    
Sbjct: 90  ESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEK 149

Query: 197 C-------NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
                   +++  VY    M ++  R+F  M K G+     S    L    +       +
Sbjct: 150 FEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCL 209

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +FR M    ++  V +   +++   +  E EK+  L++E   +GI+P A TY+TII  +
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            K         + + ++  GV  + V Y                  LL EL   N     
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYT-----------------LLMELSVKN----- 307

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
                    G++ +A  +F +  + G   D+ V+  +I    R         +F+++   
Sbjct: 308 ---------GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKDF 486
           G  P S+    +++   K+ E   A+ L +EMQ +G   +  V   ++  Y   G   + 
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           +M+  + E+    +++      + +A  + R  R ++A + + RM
Sbjct: 419 SMIYDVMEQKGFQADVFT---CNTIASCFNRLKRYDEAKQWLFRM 460


>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
 gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g51965, mitochondrial; Flags: Precursor
 gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
           Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
           thaliana]
 gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
          Length = 650

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 189/391 (48%), Gaps = 35/391 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +FAYN++L  + +    E A  +F++M++R    D YTY+ +I   G+ G  D A+    
Sbjct: 238 IFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF---- 134
           +M  + ++ ++V Y+ L+++  K     KAI +FSR+  +G  P+   Y+ ++N+     
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354

Query: 135 ----------------------------GKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
                                        K     EA  L  +M    VK +  SY ++L
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                  K +EA+ + ++++E     D    N +    G+L        LF  M+K G  
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P + +YN L+  +G      EAI++F  ++R + + ++++YN++I   GK+ + ++A   
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            +EMQ +G+ P+ +TYST++  +GK  +++ A  LF+++   G + + V Y  ++   E+
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            G  A A  L  +++Q    P     T+L R
Sbjct: 595 NGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 199/420 (47%), Gaps = 10/420 (2%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F Y  +L+  LR++ +  A  ++ E+R+ G   D + Y+ L+    K+   + A    + 
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFED 260

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M++     D   Y+ +I    ++    +A+ +F+ + + G+  ++V YNT++ V  K K+
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
             +A  +   M E G +P+  +YS LLNL V   + V  L    E+++      + +   
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISKRYMTQGIYS--Y 377

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           ++    +L    +A RLF  M    +     SY ++L     A    EAI +   +  K 
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  + + YNT+    GK  +     +L ++M+  G  P+  TY+ +IA +G+ G++D A 
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            +F++L  S  + D + Y ++I    + G V  A     E+++    P+ +   T +   
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +  R+E A  +F +    G   +I  +  +++   +N + A  ++++ KM+  G  PDS
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDS 617



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 174/349 (49%), Gaps = 10/349 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V  YN +++ + + K  + A  +F  M + G  P+ YTYS L+     EG        +
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           +  ++    G   +YS L+    KL   S+A  +F  + S  +  +  +Y +M+     A
Sbjct: 364 EISKRYMTQG---IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
               EA  ++ ++ E+GV  DT+ Y+T+ +   +  +      +F +M +     D+ T 
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI+I  +G++    +A  +F  + +    P ++SYN+L+   G+     EA   F+ MQ 
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           K +  +VVTY+T+++ +GK+   E A +L +EM  +G +PN +TY+ ++    K G+   
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
           A  L+ K++  G+  D + Y  +    ER+  V+H K     +R+ N I
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVL----ERLQSVSHGK---SRIRRKNPI 642



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 188/391 (48%), Gaps = 26/391 (6%)

Query: 88  DLVLYSNLIELARK--LSD-YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           D  LY+ +I +  +  L D + +  SI   +  S +  ++   N +I  FG  +   + +
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTE---DLQ 188

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
           + +  +++  +K ++ +Y  LL  Y+ +  + +A  V+ E+      LD+   N+++D  
Sbjct: 189 MCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA- 247

Query: 205 GQLDMAKD--ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
               +AKD  A ++F  M+K        +Y  ++R  G      EA+ LF  M  + +  
Sbjct: 248 ----LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTL 303

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAA 319
           NVV YNT++++  K    +KA  +   M   G  PN  TYS ++ +    G+  +LD   
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-PNTIPRETAITIL--- 375
            + ++  + G+      Y  ++    ++G V+ A RL  ++   P    R++ +++L   
Sbjct: 364 EISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
             AG+  EA  +  +  + G V D  ++  +     + K+ +++ ++FEKM+  G  PD 
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGC 466
               +++ S+G++ E + A +++ E++   C
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDC 508



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           LD + E ++   +   Y+ ++R + +      AH LF +M    +  +R +Y +++    
Sbjct: 359 LDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             G    AI  L ++ +  V  D ++Y+ +     KL   S    +F ++K  G  PD+ 
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            YN +I  FG+     EA  + EE+     KPD +SY++L+N   +N    EA   F EM
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E     D+ T + +++ +G+ +  + A  LF  M   G  P++V+YN LL    +    
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
            EA+ L+  M+++ +  + +TY  + ++  +S+ H K+
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVLERL--QSVSHGKS 634


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 167/331 (50%), Gaps = 4/331 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A   P+   YN ++  + +A++   A+ L +EM   G  PD +TY+TLIT F K    
Sbjct: 46  QDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 105

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNT 129
           D A+   +Q+       D+V YS LI+   K     +AI +F R+ KS   +P+ V YN+
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+ F +     EA  L+E M E G  PD V+Y+TL+N + +  +  +A  +  +M    
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              ++ T   ++D   + +   DA  +   MR+    P+V +YNT+L  Y       EA 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
               +++  +   NVV++N MI+   K     +A  L++E + R   P+ + Y+T+I + 
Sbjct: 286 KF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343

Query: 310 GKAGKLDRAAMLFQK-LRSSGVEIDPVLYQT 339
            +  K+D A  +++K L   G   + + Y T
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSITYST 374



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 4/319 (1%)

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP  V YN++I+   KA+   EA  L+EEM   G  PD  +Y+TL+  + ++ K  +AL 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVY 239
           VF ++       D+ T + +ID   +    K+A  LF  M K G   P+ V+YN+L+  +
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                  EA++L   M       +VVTY T++  + K    + A +L+ +M  +G+ PN 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR-LLH 358
           +T+++++    +  +L  A  +  ++R          Y T++  Y RV  +  A++ +L 
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 359 ELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
           E+   PN +     I  L +  R  EA  +  +A       D+ ++  +I++  R KK  
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350

Query: 418 NVIEVFEKM-RSAGYFPDS 435
               V+ KM    G  P+S
Sbjct: 351 EACRVYRKMLEEPGCLPNS 369



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 15/291 (5%)

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           +Q  E     VTYN++I    K+    +A +L++EM   G  P+  TY+T+I  + K+ K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRE 369
            D A  +F++L + G   D V Y  +I    + G +  A  L   + +     PNT+   
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           + I+   R G+++EA  +  +  + G   D+  +  ++  F +  +  +  ++  +M   
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  P+      +++   +      A  +  EM+ + C  +   +  +L  Y      N L
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR---VNQL 281

Query: 490 ES----LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           E     + E +D   N+     + ++ G+  + NR ++A  ++    +RR 
Sbjct: 282 EEARKFMLEEMDCPPNV--VSFNIMIRGLC-KVNRSSEAMELVEEARRRRC 329


>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
          Length = 967

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/528 (23%), Positives = 249/528 (47%), Gaps = 21/528 (3%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L ++ + A+  P++   N ++    +  Q + A   F+ ++     PD +TY+TLI   
Sbjct: 288 LLTFMRDNAKIQPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGL 347

Query: 65  GKEGMFDSAISWLQQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIV 121
                 D  +++ Q  E+ +     D ++Y+ L++      D ++   + + +K S  I 
Sbjct: 348 KNSDNMDLRLAF-QLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQ 406

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D + YNT+I   G+ K   EA  L EEM++ G+KP+ +S+++LL+  V+ +K   A   
Sbjct: 407 LDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLDSCVKCNKMNVAWRY 466

Query: 182 FAEM-NEVNCPLDLTTCNIMID----VYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTL 235
           F EM  +     D  T +I+++     +   D    A  L   +++ G   P  + YN+L
Sbjct: 467 FEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSL 526

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +    +     + + LF+ M+ K IE + VTY  +IK YGK  +   A  + +EM+ + I
Sbjct: 527 IDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKI 586

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
             N +TY  ++    +  +LD+A    ++++S  + I+ VLY T+I  + ++     A +
Sbjct: 587 PINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEAMK 646

Query: 356 LLHELRQ-----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
               ++Q     PN I   + +  L + G + +A  +F++  ++    D+  F  +++  
Sbjct: 647 YFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKPDLITFSTLLKGH 706

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
            R      + E  + M      PD  ++ L+L S    +++     +Y + Q +    S 
Sbjct: 707 CRRGNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYHNGVQIYDQFQHQ-IPQST 765

Query: 471 QVHFQMLSLYGARKDFN----MLESLFERLDSDSNINKKELHHVVAGI 514
           Q+   ++ L+   K  +    +L  L++ LD +S I  ++L   +  +
Sbjct: 766 QLLLIIIRLHSQDKQLSSAIPLLNRLYQLLD-ESRIQHQQLETTINSL 812



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 170/350 (48%), Gaps = 11/350 (3%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   +L+ + +          YN +++   R K+   A  LF+EM+Q GI P+R ++++L
Sbjct: 391 RGFQLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSL 450

Query: 61  ITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYS------KAISIFS 113
           +    K    + A  + ++M +Q  +  D   YS L+   +  +++S      +AI++  
Sbjct: 451 LDSCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGIK--TNHSNRDELLRAITLLE 508

Query: 114 RLKSSG-IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
           +++ +G   PD + YN++I+   K    ++   L +EM+ + ++P +V+Y  L+  Y + 
Sbjct: 509 QIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKM 568

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
           +    A  +F EM +   P++  T   ++D   + D    A +    M+   +  + V Y
Sbjct: 569 NDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLY 628

Query: 233 NTLLRVYGEAELFGEAIHLFRLM-QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
            T+++ + +     EA+  F LM Q +    N++TYN+++    K+    +A  L QE+ 
Sbjct: 629 TTIIKGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELV 688

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
              I+P+ IT+ST++    + G + R     Q +    +  D  L Q ++
Sbjct: 689 ESTIKPDLITFSTLLKGHCRRGNMKRLNETVQTMLHYQINPDESLLQLIL 738



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R++ +L+ I E  ++ P    YN ++   ++  + +    LF EM+ + I P   TY  L
Sbjct: 502 RAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGIL 561

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +GK    + A    ++M+Q ++  + V Y  L++   +     +A+    ++KS  +
Sbjct: 562 IKAYGKMNDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNL 621

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEAL 179
             + V Y T+I  F K    +EA      M++ Q   P+ ++Y++LL+  V+N    +A 
Sbjct: 622 PINTVLYTTIIKGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQAD 681

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F E+ E     DL T + ++  + +    K  +    +M    I+P      +LL++ 
Sbjct: 682 KLFQELVESTIKPDLITFSTLLKGHCRRGNMKRLNETVQTMLHYQINPD----ESLLQLI 737

Query: 240 GEAELFGEAIH 250
            E+ L  +  H
Sbjct: 738 LESCLNQQQYH 748


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 256/577 (44%), Gaps = 56/577 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            +LD + +EA   P+V  Y   +    R K  E A  L++ M + G+  D  T S L+  
Sbjct: 225 GVLDMM-KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             ++G F  A +  ++M++   + + V Y  LI+   K     + +S+   + S G+V D
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           LV Y  +++  GK     E +  +       + P+ V+Y+ L++   + H   EA  V  
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 184 EMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL----- 235
           EM E +   ++ T + +I+ +   G LD A +  R+   M++ GI+P+VV+Y TL     
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM---MKERGINPNVVTYGTLIDGFF 460

Query: 236 --------LRVYGEAELFG----------------------EAIHLFRLMQRKEIEQNVV 265
                   L VY +    G                      EA+ LF+      +  + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            Y T+I    K+ +   A    QE+ +R + P+A+ Y+  I      GK   A     ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R+ G++ D   Y TMIV++ R G  A A +LLHE++    +PN I   T +  L   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI---I 438
           E+A ++  +   AG          +++  S++++   ++++ E M +AG   D  +   +
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERL 496
             VL  +G  R+   A  +  EM   G +  D + F  L L   +     N   +  + L
Sbjct: 701 LQVLCYHGMTRK---ATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + + N    + ++ G+ E   R+ +A  ++  M K
Sbjct: 757 HQNISPNIATFNTLLGGL-ESVGRIGEAGTVLIEMEK 792



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/495 (21%), Positives = 216/495 (43%), Gaps = 13/495 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P+V  Y  ++    + +  + A  ++ +M   G+  +++   +L+    + G  
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++  +      +S D V Y+ LI+   K  D   A      L    ++PD V YN  
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN       FKEA+  + EMR  G+KPD  +Y+T++  +    +  +AL +  EM   + 
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L T N ++         + A  L   M   G  PS +++  +L+   ++      + 
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M    +  ++  YNT++++        KAT +++EM   GI P+ IT++ +I    
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K+  LD A   + ++    +  +   + T++   E VG +  A  +L E+     +PN +
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +   T   +     EA  ++ +    G V  +S +  +I  F++        E+F+ M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 427 RSAGYFPDSHIIALVLNSYGKL-REFETADDLYSEM--------QEEGCVFSDQVHFQML 477
           +  G  P S    ++++ +  L RE ++ +  ++E+        Q +  +    +  Q +
Sbjct: 861 QKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYCFSASRHQSKIAISRVNLALQFM 920

Query: 478 SLYGARKDFNMLESL 492
           SLY      N L  L
Sbjct: 921 SLYLNGPKMNWLNGL 935



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 242/562 (43%), Gaps = 59/562 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P+  AYN++L     A   + AH   +  EM +RG+  D  T +TL+    + G  D+A 
Sbjct: 101 PTTVAYNILL-----AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 75  SWLQQMEQDRVSG----DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +       DR  G    D++ ++ LI    ++ D   A+S+  R+ + G+  D+V YNT+
Sbjct: 156 AL-----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTL 210

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE------------------- 171
           +  F +A     AR +++ M+E GV P+  +Y+  +  Y                     
Sbjct: 211 VAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270

Query: 172 ----------------NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
                           + +F EA ++F EM++V    +  T   +ID   +    K+   
Sbjct: 271 LLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLS 330

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M   G+   +V+Y  L+   G+     E     R      +  N VTY  +I    
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALC 390

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+   ++A  ++ EM+ + I PN +T+S++I  + K G LD+A    + ++  G+  + V
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV 450

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y T+I  + +      A  + H++     + N    ++ +  L + G+IEEA  +F+ A
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             +G   D   +  +I+   +        +  +++      PD+ +  + +N    L +F
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKF 570

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHH 509
           + A    +EM+  G +  DQ  +  + +   RK      L+ L E   S    N    + 
Sbjct: 571 KEAKSFLTEMRNMG-LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           +VAG++     +  A  ++N M
Sbjct: 630 LVAGLFG-TGAVEKAKYLLNEM 650



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 208/501 (41%), Gaps = 45/501 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  +N ++    R      A  + D M  +G+  D   Y+TL+  F + G  D+A   L 
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M++  V  ++  Y+  I    +     +A  ++  +  +G++ D+V  + ++    +  
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F EA  L  EM + G  P+ V+Y TL++   +  +  E LS+  EM      +DL T  
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348

Query: 199 IMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            ++D     G+ D  KD  R   S     + P+ V+Y  L+    +A    EA  +   M
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDN---LSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK---- 311
           + K I  NVVT++++I  + K    +KAT   + M+ RGI PN +TY T+I  + K    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 312 -------------------------------AGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                                           GK++ A  LF+    SG+ +D V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I    + G +  A +   EL   N +P        I  L   G+ +EA     +  + G 
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D S +  MI    R  + A  +++  +M+ +   P+      ++         E A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 457 LYSEMQEEGCVFSDQVHFQML 477
           L +EM   G   S   H ++L
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVL 666


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 207/463 (44%), Gaps = 5/463 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+ E  R+  S+  YNV++  + +      A  +   +R++G+  D  TY TL+  F + 
Sbjct: 243 WM-ESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRV 301

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
             FD  I  + +M +          S L++  RK  +   A  +  +L   G +P+L  Y
Sbjct: 302 QQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVY 361

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN   K +   +A LL + M    +  + V+YS L++ + +      A S F  M E
Sbjct: 362 NALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIE 421

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                 +   N +I+ + +      A+ L+  M   G++P+  ++ TL+  Y +     +
Sbjct: 422 DGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEK 481

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  L+R M  KEI  +V T+  +I     + E  +A+ L  EM  R I+P  +TY+ +I 
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
            + KA  +D+A  L + +  +G+  D   Y+ +I      G V+ AK  + +L + N   
Sbjct: 542 GYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKL 601

Query: 368 RETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
            E   + L       GR+ EA     +    G   D+     +I+   + +    +  + 
Sbjct: 602 NEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLL 661

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +KM   G  PDS I   ++++Y K   F+ + +    M  E C
Sbjct: 662 KKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKC 704



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/506 (22%), Positives = 211/506 (41%), Gaps = 40/506 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++F YN ++  + + +  + A  L+  M    +  +  TYS LI  F K GM D A 
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S+  +M +D +   +  Y++LI    K  D S A  +++++ + G+ P    + T+I+ +
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K    ++A  L  EM E+ + P   +++ L+      ++  EA  +F EM E       
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N+MI+ Y +      A  L   M   G+ P   +Y  L+           A      
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           + +K ++ N + Y+ ++  Y       +A +   EM  RGI  + + ++ +I    K   
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH----ELRQPNTIPRET 370
           + R   L +K+   G+  D V+Y +MI AY + G    +   L     E   PN +    
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTA 713

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR------------------ 412
            +  L + G I+ A  +F +   A    +   +GC ++  ++                  
Sbjct: 714 FMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGL 773

Query: 413 --NKKYANVI--------------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             N    N++              +V  +M   G FPD    + ++  + +  +   A +
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGA 482
           L+  M  +G V  D V F +L +YG 
Sbjct: 834 LWDTMLRKG-VEPDSVAFNLL-IYGC 857



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 191/452 (42%), Gaps = 46/452 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   +  ++    +  Q E A  L+ EM ++ IAP  YT++ LI           A   
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKL 520

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M + ++    V Y+ +IE   K  +  KA  +   +  +G+VPD   Y  +I+    
Sbjct: 521 FDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCS 580

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A+  I+++ ++ +K + + YS LL+ Y    +  EALS   EM +    +DL  
Sbjct: 581 TGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVC 640

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             ++ID  G +   +D  RLF  ++KM        Y+  LR                   
Sbjct: 641 HAVLID--GAMKQ-QDMKRLFGLLKKM--------YDQGLR------------------- 670

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
                 + V Y +MI  Y K    +K+   +  M      PN +TY+  +    K G++D
Sbjct: 671 -----PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEID 725

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ---PNTIPRETAIT 373
           RA  LF+K+ ++ +  + V Y   + +  + G +  A  L HE+ +    NT      I 
Sbjct: 726 RAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIR 785

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              + GR+ EAT V  +  + G   D   +  +I    R+      +E+++ M   G  P
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845

Query: 434 DSHIIALVLNSYGKL------REFETADDLYS 459
           DS  +A  L  YG        + FE  +D+ S
Sbjct: 846 DS--VAFNLLIYGCCVNGALDKAFELRNDMLS 875



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 164/358 (45%), Gaps = 1/358 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E +  P+   YNV++    +A   + A  L ++M   G+ PD YTY  LI+     G   
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A  ++  + +  +  + + YS L+         ++A+S    +   GI  DLV +  +I
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K +  K    L+++M +QG++PD+V Y+++++ Y +   F ++      M    C 
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T    ++   ++     A  LF  M    I P+ V+Y   L    +     EA  L
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  K +  N  TYN +I+ + K     +AT ++ EM   GI P+ ITYSTII    +
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           +G +  A  L+  +   GVE D V +  +I      G +  A  L +++      PR+
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/469 (21%), Positives = 194/469 (41%), Gaps = 35/469 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   + +L  +LR +++ L   +FDE    G+ PD YT S +I    +   F  A   
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  ME +R    +V Y+ LI    K     +A+ +   L+  G+  D+V Y T++  F +
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F +   L+ EM E G  P   + S L++   +      A  +  ++       +L  
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFV 360

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+   + +    A+ L+ +M  M +  + V+Y+ L+  + +  +   A   F  M 
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMI 420

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              I + +  YN++I  + K  +   A  L  +M N G+EP A T++T+I+ + K  +++
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 317 RAAMLFQKLRSSGVEIDPVLY--QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +A  L++++     EI P +Y    +I        +A A +L  E+ +    P E    +
Sbjct: 481 KAFKLYREMNEK--EIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNV 538

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
                                          MIE + +        E+ E M   G  PD
Sbjct: 539 -------------------------------MIEGYCKAHNMDKAFELLEDMLHNGLVPD 567

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           ++    +++          A D   ++ ++    ++  +  +L  Y  +
Sbjct: 568 TYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQ 616



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 6/328 (1%)

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A +++  M    + P+  + S +LN  +   KF+    VF E        D  TC+ +I
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI 225

Query: 202 DVYGQL-DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
               +L D  +  +++ W M     D S+V+YN L+    +     EA+ + + ++ K +
Sbjct: 226 RSLCELKDFCRAKEKILW-MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGL 284

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           +++VVTY T++  + +  + +    LM EM   G  P     S ++    K G +D A  
Sbjct: 285 KEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYD 344

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL---LHELRQP-NTIPRETAITILA 376
           L  KL   G   +  +Y  +I A  +   +  A+ L   +H +  P N +     I    
Sbjct: 345 LVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFC 404

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G ++ A   F +  + G  + I  +  +I    +    +    ++ KM + G  P + 
Sbjct: 405 KRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTAT 464

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEE 464
               +++ Y K  + E A  LY EM E+
Sbjct: 465 TFTTLISGYCKDLQVEKAFKLYREMNEK 492



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/360 (18%), Positives = 150/360 (41%), Gaps = 4/360 (1%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ +   +  + ++P++   + ++N   + + F     + +E    GVKPD  + S ++ 
Sbjct: 167 AVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIR 226

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              E   F  A      M      L + T N++I    +     +A  +  S+R+ G+  
Sbjct: 227 SLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKE 286

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
            VV+Y TL+  +   + F + I L   M            + ++    K    + A +L+
Sbjct: 287 DVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLV 346

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            ++   G  PN   Y+ +I    K   LD+A +L++ + S  + ++ V Y  +I ++ + 
Sbjct: 347 VKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKR 406

Query: 348 GLVAHAK----RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G++  A+    R++ +  +    P  + I    + G +  A +++ +  + G     + F
Sbjct: 407 GMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTF 466

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I  + ++ +     +++ +M      P  +    ++       E   A  L+ EM E
Sbjct: 467 TTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVE 526


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 229/474 (48%), Gaps = 7/474 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN++++  ++ +Q+  A GL D M  + + PD Y+Y T+I    K G   SA+  
Sbjct: 147 PNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEV 206

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFG 135
             +M +  +  D++ Y+ +I+   K  DY +   I+ RL K S + P++V YN MIN   
Sbjct: 207 FDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLC 266

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   F E+  + E M++   + D  +YS+L+    +      A+ V+ EM + +  +D+ 
Sbjct: 267 KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVV 326

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +++ + +    K++  L+  M K     +VVSYN  +R   E     EAI ++ L+
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +R+    +  TY  +I    K+    KA  +++E ++ G + +A  YS+I+    K G++
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           D A  +  ++   G E+ P +   +I  + R   +  A     E+      P  +   T 
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L +A R  +A    ++  +     D+  +  +++   + KK    + ++ ++   G 
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARK 484
            PD  +  ++++      + E A  LYS M++  C+ +   H  ++  LY AR+
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARE 619



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/474 (22%), Positives = 219/474 (46%), Gaps = 13/474 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+ D  + +  Y+ S   + ++LR +   K       + + ++ +          T++
Sbjct: 26  ALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVL 85

Query: 62  TCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             + K  M + A+   Q+ME+       +  Y+ L+    + +   KA S  +  ++ GI
Sbjct: 86  KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGI 145

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P+L  YN +I +  K + F EA+ L++ M  + +KPD  SY T++N  V++   V AL 
Sbjct: 146 LPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALE 205

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDA-DRLFWSMRKMGIDPSVVSYNTLL 236
           VF EM E     D+   NIMID +   G     K+  +RL   ++   + P+VV+YN ++
Sbjct: 206 VFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERL---VKGSCVYPNVVTYNVMI 262

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +   F E++ ++  M++ E E ++ TY+++I         + A  + +EM  R + 
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
            + +TY+ ++  + +AGK+  +  L+  +       + V Y   I        V  A  +
Sbjct: 323 VDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISV 381

Query: 357 LHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
              LR+  +    T   +    L + G + +A  + ++A D G+  D   +  +++  S+
Sbjct: 382 WELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSK 441

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
             +    + +  +M   G     H+   ++N + +  + E A   + EM+ +GC
Sbjct: 442 QGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/506 (22%), Positives = 209/506 (41%), Gaps = 75/506 (14%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            +LDW+  +    P V++Y  V+  ++++     A  +FDEM +RG+ PD   Y+ +I  
Sbjct: 170 GLLDWMWSK-DLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 64  F--------GKE----------------------------GMFDSAISWLQQMEQDRVSG 87
           F        GKE                            G FD ++   ++M+++    
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288

Query: 88  DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA---- 143
           DL  YS+LI     + +   A+ ++  +    +V D+V YN ++N F +A   KE+    
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348

Query: 144 ------------------RLLIEE------------MREQGVKPDTVSYSTLLNLYVENH 173
                             R L E             +R +G   D+ +Y  L++   +N 
Sbjct: 349 VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408

Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
              +AL +  E  +    LD    + ++D   +     +A  +   M K G + S    N
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468

Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
            L+  +  A    EAI  FR M+ K     VV+YNT+I    K+     A + ++EM  +
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
             +P+ ITYS ++    +  K+D A  L++++   G+E D  ++  ++      G +  A
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA 588

Query: 354 KRLLHELRQPNTIP----RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             L   ++Q N +P      T +  L +A   E A+ ++   F  G   DI  +   ++ 
Sbjct: 589 LLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKG 648

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDS 435
                + ++ I +F+     G  P S
Sbjct: 649 LCSCGRISDGIALFDDALKNGILPTS 674



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 158/341 (46%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W+        +V +YN+ +R +   ++ E A  +++ +R+RG   D  TY  LI    K 
Sbjct: 348 WVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  + A+  L++ +      D   YS++++   K     +A+ I  ++   G        
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           N +IN F +A   +EA     EM  +G  P  VSY+TL+N   +  +F +A S   EM E
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            +   D+ T ++++D   Q      A  L+  +   G++P V  +N L+     A    +
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ L+  M++     N+VT+NT++    K+ E E A+ +   M   G +P+ I+Y+  + 
Sbjct: 588 ALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLK 647

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
                G++     LF     +G+    + +  ++ A  ++G
Sbjct: 648 GLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 186/431 (43%), Gaps = 69/431 (16%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YNV++  + +  +++ +  +++ M++     D +TYS+LI      G  D A+  
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 77  LQQMEQDRVSGDLVLYSNLI---------------------ELARKLSDYS--------- 106
            ++M +  V  D+V Y+ L+                     E    +  Y+         
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFEN 372

Query: 107 ----KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
               +AIS++  L+  G   D   Y  +I+   K     +A  +++E ++ G K D  +Y
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 163 STLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           S++++   +  +  EAL +  +M++  C L    CN +I+ + +    ++A   F  M  
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G  P+VVSYNTL+    +AE F +A    + M  K+ + +++TY+ ++    +  + + 
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552

Query: 283 ATNLMQEMQNRGIEP-----------------------------------NAITYSTIIA 307
           A NL +++  +G+EP                                   N +T++T++ 
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              KA + + A++++  +  +G + D + Y   +      G ++    L  +  +   +P
Sbjct: 613 GLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILP 672

Query: 368 RETAITILARA 378
                 IL RA
Sbjct: 673 TSITWYILVRA 683



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/295 (18%), Positives = 128/295 (43%), Gaps = 44/295 (14%)

Query: 249 IHLFRLM-----QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN-RGIEPNAITY 302
           +H+ R++     Q+ +  ++VV   T++K Y KS    +A +  Q+M+   G +P   +Y
Sbjct: 60  VHVTRIVELIKTQKCKCTEDVVL--TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSY 117

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
           + ++  + +A  L++A                   ++ +  +E VG++            
Sbjct: 118 NALLNAFIEANLLEKA-------------------ESFLAYFETVGIL------------ 146

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN       I I  +  +  EA  +    +      D+  +G +I    ++    + +EV
Sbjct: 147 PNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEV 206

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
           F++M   G  PD     ++++ + K  ++    +++  + +  CV+ + V + ++ + G 
Sbjct: 207 FDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVM-INGL 265

Query: 483 RKDFNMLESL--FERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            K     ESL  +ER+  ++  ++      ++ G+ +  N ++ A  +   M KR
Sbjct: 266 CKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGN-VDGAVEVYKEMVKR 319


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 68/486 (13%)

Query: 18  SVFAYNVVLRNVLRAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           ++  YNV++  + + ++ WE A G+  ++  + + PD  TY TL+    K   F+  +  
Sbjct: 261 NIVPYNVLIDGLCKKQKVWE-AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M   R S      S+L+E  RK     +A+++  R+   G+ P+L  YN +I+   K
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F EA LL + M + G++P+ V+YS L++++    K   ALS   EM +    L +  
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439

Query: 197 CNIMID---VYGQLDMAKD--------------------------------ADRLFWSMR 221
            N +I+    +G +  A+                                 A RL+  M 
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI PS+ ++ TLL     A L  +A+ LF  M    ++ N VTYN MI+ Y +  +  
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA   ++EM  +GI P+  +Y  +I      G+   A +    L     E++ + Y  ++
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
             +                                R G++EEA  V ++    G   D+ 
Sbjct: 620 HGF-------------------------------CREGKLEEALSVCQEMVQRGVDLDLV 648

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +G +I+   ++K       + ++M   G  PD  I   ++++  K  +F+ A  ++  M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 462 QEEGCV 467
             EGCV
Sbjct: 709 INEGCV 714



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/531 (22%), Positives = 224/531 (42%), Gaps = 76/531 (14%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++F YN ++ ++ + +++  A  LFD M + G+ P+  TYS LI  F + G  D+A+S
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +L +M    +   +  Y++LI    K  D S A    + + +  + P +V Y +++  + 
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                 +A  L  EM  +G+ P   +++TLL+         +A+ +F EM E N   +  
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543

Query: 196 TCNIMIDVYGQ-LDMAKDADRLFWSMRKMGIDPSVVSYNTLL------------RVY--- 239
           T N+MI+ Y +  DM+K A      M + GI P   SY  L+            +V+   
Sbjct: 544 TYNVMIEGYCEEGDMSK-AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 240 ---GEAEL-----------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
              G  EL                   EA+ + + M ++ ++ ++V Y  +I    K  +
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
            +    L++EM +RG++P+ + Y+++I    K G    A  ++  + + G   + V Y  
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETA---------------------------- 371
           +I    + G V  A+ L  +++  +++P +                              
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG 782

Query: 372 -----------ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
                      I    R GRIEEA+ +  +    G   D   +  MI    R       I
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
           E++  M   G  PD      +++      E   A +L +EM  +G + +++
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/556 (21%), Positives = 232/556 (41%), Gaps = 43/556 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V   + +L  +++ + + LA  LF++M   GI PD Y Y+ +I    +      A   
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  ME      ++V Y+ LI+   K     +A+ I   L    + PD+V Y T++    K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            + F+    +++EM      P   + S+L+    +  K  EAL++   + +     +L  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +ID   +     +A+ LF  M K+G+ P+ V+Y+ L+ ++        A+     M 
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +V  YN++I  + K  +   A   M EM N+ +EP  +TY++++  +   GK++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
           +A  L+ ++   G+      + T++    R GL+  A +L +E+ + N  P      +  
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549

Query: 375 -------------------------------------LARAGRIEEATWVFRQAFDAG-- 395
                                                L   G+  EA  VF      G  
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNC 608

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
           E+ +I   G ++  F R  K    + V ++M   G   D     ++++   K ++ +   
Sbjct: 609 ELNEICYTG-LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
            L  EM + G    D ++  M+       DF     +++ + ++  +  +  +  V    
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 516 ERANRLNDASRIMNRM 531
            +A  +N+A  + ++M
Sbjct: 728 CKAGFVNEAEVLCSKM 743



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 4/361 (1%)

Query: 10  NEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           NE A ++  P+   YNV++           A     EM ++GI PD Y+Y  LI      
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G    A  ++  + +     + + Y+ L+    +     +A+S+   +   G+  DLV Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I+   K K  K    L++EM ++G+KPD V Y+++++   +   F EA  ++  M  
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FG 246
             C  +  T   +I+   +     +A+ L   M+ +   P+ V+Y   L +  + E+   
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           +A+ L   +  K +  N  TYN +I+ + +    E+A+ L+  M   G+ P+ ITY+T+I
Sbjct: 771 KAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
               +   + +A  L+  +   G+  D V Y T+I      G +  A  L +E+ +   I
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889

Query: 367 P 367
           P
Sbjct: 890 P 890



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 110/249 (44%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y V++   L+ K  +L  GL  EM  RG+ PD   Y+++I    K G F  A      M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
             +    + V Y+ +I    K    ++A  + S+++    VP+ V Y   +++  K ++ 
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            +  + +     +G+  +T +Y+ L+  +    +  EA  +   M       D  T   M
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I+   + +  K A  L+ SM + GI P  V+YNTL+     A   G+A  L   M R+ +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

Query: 261 EQNVVTYNT 269
             N  T  T
Sbjct: 889 IPNNKTSRT 897


>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Cucumis sativus]
          Length = 456

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 183/357 (51%), Gaps = 2/357 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + + + E+  Y P    Y  ++  + + KQ E A+ LF EM + G      +Y+ L+
Sbjct: 83  ALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALL 142

Query: 62  TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + + + G+ D A S L +M+       D+  YS LI+   ++  ++KA ++ S + + GI
Sbjct: 143 SAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGI 202

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P+ + YNT I+ +GKAK+F E   +L++ + + G KPD  + ++ L  +  + +     
Sbjct: 203 KPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETME 262

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + +  E      + T NI++D YG+ +  +    +   M+K     ++V+YN ++  +
Sbjct: 263 KCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 322

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    +  HLFRLM+ + I+ + VT  ++++ YG++ + EK  +++  ++N  I  + 
Sbjct: 323 GRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDT 382

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           + Y+ ++  +G+         +   +   G + D   Y+TM  AY   G+  HAK +
Sbjct: 383 VFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEI 439



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 118/294 (40%), Gaps = 36/294 (12%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           + +IL+ +       P V  Y++++++ L+   +  A  L  +M  RGI P+  TY+T I
Sbjct: 154 AFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFI 213

Query: 62  TCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             +GK  MF    S L  M   D    D+   ++ +    +          + + + +GI
Sbjct: 214 DAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGI 273

Query: 121 VPDL-----------------------------------VAYNTMINVFGKAKLFKEARL 145
            P +                                   V YN +I+ FG+A   K+   
Sbjct: 274 QPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEH 333

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L   MR + +KP  V+  +L+  Y +  K  +  SV   +   +  LD    N ++D YG
Sbjct: 334 LFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYG 393

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +L+   +  ++   M + G  P   +Y T+ R Y +  +   A  +  L+   E
Sbjct: 394 RLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 447



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 8/335 (2%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK- 258
           +I + G+    + A  LF  M + G + S  SY  LL  Y  + L  EA  +   M+   
Sbjct: 106 LIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSP 165

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL-DR 317
           + + +V TY+ +IK   +     KA  L+ +M  RGI+PN ITY+T I  +GKA    + 
Sbjct: 166 DCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 225

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL-- 375
            ++L   L   G + D     + + A+ R G +   ++   + ++    P      IL  
Sbjct: 226 ESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLD 285

Query: 376 --ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +A   E+ + V            I  +  +I+ F R      +  +F  MRS    P
Sbjct: 286 SYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKP 345

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESL 492
               +  ++ +YG+  + E  D + + + E   +  D V +  L   YG  + F  ++ +
Sbjct: 346 SCVTLCSLVRAYGQAGKREKIDSVLN-LVENSDIMLDTVFYNCLVDAYGRLECFAEMKKV 404

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
              ++       K  +  +A  Y      N A  I
Sbjct: 405 LGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEI 439



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 6/239 (2%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y  +I + GK  + EKA  L QEM   G E +  +Y+ +++ + ++G LD A  +  +++
Sbjct: 103 YIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMK 162

Query: 327 SS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           +S   + D   Y  +I +  +V     A+ LL ++     +PNTI   T I    +A   
Sbjct: 163 NSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMF 222

Query: 382 EEATWVFRQAF-DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
            E   +      D G   D+      +  F R+ +   + + +EK + AG  P      +
Sbjct: 223 AEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNI 282

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           +L+SYGK   +E    +   MQ+    ++   +  ++  +G   +   +E LF  + S+
Sbjct: 283 LLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSE 341



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/314 (18%), Positives = 138/314 (43%), Gaps = 6/314 (1%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P    Y  L+ + G+ +   +A  LF+ M  +  E +  +Y  ++  Y +S   ++A ++
Sbjct: 98  PYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSI 157

Query: 287 MQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           + EM+N    +P+  TYS +I    +    ++A  L   + + G++ + + Y T I AY 
Sbjct: 158 LNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYG 217

Query: 346 RVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           +  + A  + +L ++      +P+     + +    R+G++E     + +  +AG    I
Sbjct: 218 KAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSI 277

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             F  +++ + + + Y  +  V E M+   Y        +V++++G+    +  + L+  
Sbjct: 278 QTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRL 337

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           M+ E    S      ++  YG       ++S+   +++   +     ++ +   Y R   
Sbjct: 338 MRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLEC 397

Query: 521 LNDASRIMNRMNKR 534
             +  +++  M +R
Sbjct: 398 FAEMKKVLGMMEQR 411


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 200/424 (47%), Gaps = 11/424 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N  +  + +  +   A  L D M  RG  P+ +TY  L+    + G  D A   
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 77  LQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           L ++    V    VL++ LI   ++R   D +KA+ +   + S G  PD+  YNT+I   
Sbjct: 345 LNKVPNPNV----VLFNTLINGYVSRGRLDEAKAV-MHESMLSVGCGPDIFTYNTLILGL 399

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K      AR L+ EM+ +G +P+ ++Y+ L++ + +  +  EA +V  EM+     L+ 
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +I    + +  +DA  +F  M   G  P + ++N+L+    +   F EA+ L++ 
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + +  N +TYNT+I  + +    ++A  L+ +M  RG   + ITY+ +I    +AG 
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRET 370
           +++   LF+ + S G+  + +    +I    R G + HA    + ++H    P+ +   +
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR +EA  +F +    G   D   +  +I    +   + +   +  +   +G
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699

Query: 431 YFPD 434
           + P+
Sbjct: 700 FIPN 703



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +F YN ++  + +      A  L +EM+ +G  P+  TY+ LI  F KEG  + A +
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M    ++ + V Y+ LI    K      A+++F  + S G  PD+  +N++I    
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 505

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   F+EA  L ++M  +GV  +T++Y+TL++ ++      EAL +  +M    CPLD  
Sbjct: 506 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 565

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I    +    +    LF  M   G++P+ +S N L+           A+   R M
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  ++VTYN++I    K+   ++A NL  ++Q  GI P+AITY+T+I+   K G  
Sbjct: 626 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 685

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           D A +L  +   SG   + V +  ++  + + G
Sbjct: 686 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 208/457 (45%), Gaps = 15/457 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +YNVVL  +L     ++   +F EM  +GI+P  YT+  ++         DSA + 
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M +     + ++Y  LI    K+   ++ + +   +   G +PD+  +N  I+   K
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L++ M  +G  P++ +Y  L++      K  EA  +   +N+V  P ++  
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML---LNKVPNP-NVVL 355

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N +I+ Y   G+LD AK    +  SM  +G  P + +YNTL+    +      A  L  
Sbjct: 356 FNTLINGYVSRGRLDEAKAV--MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQ K  E NV+TY  +I  + K    E+A N++ EM  +G+  NA+ Y+ +I+   K  
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
           K+  A  +F  + S G + D   + ++I    +V     A    + +L E    NTI   
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533

Query: 370 TAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           T I    R G ++EA   V    F    + DI+  G +I+   R       + +FE M S
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG-LIKALCRAGNIEKGLALFEDMMS 592

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  P++    +++N   +    + A +   +M   G
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 172/362 (47%), Gaps = 1/362 (0%)

Query: 16  SPSVFAYNVVLRN-VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+V  +N ++   V R +  E    + + M   G  PD +TY+TLI    K+G   SA 
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M+      +++ Y+ LI+   K     +A ++   +   G+  + V YN +I+  
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +  ++A  +  +M  +G KPD  ++++L+    + +KF EAL ++ +M       + 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  + +    ++A +L   M   G     ++YN L++    A    + + LF  
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  N ++ N +I    ++   + A   +++M +RG+ P+ +TY+++I    K G+
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  LF KL+  G+  D + Y T+I  + + G+   A  LL        IP E    I
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709

Query: 375 LA 376
           L 
Sbjct: 710 LV 711



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 194/482 (40%), Gaps = 46/482 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ +  W   +  Y      Y +++  +  A +++    L  +M+Q GI      +  ++
Sbjct: 94  SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIM 153

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI-SIFSRLKSSGI 120
             +G+ G+   A   L  M             N++       +  K + ++F  + S GI
Sbjct: 154 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 213

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P +  +  ++           A  L+++M   G  P+ + Y TL          + AL 
Sbjct: 214 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTL----------IHALX 263

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
               +NEV                          +L   M  MG  P V ++N  +    
Sbjct: 264 KVGRVNEVL-------------------------KLLEEMLLMGCIPDVNTFNDAIHGLC 298

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     EA  L   M  +    N  TY  ++    +  + ++A  L+ ++ N    PN +
Sbjct: 299 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVV 354

Query: 301 TYSTIIAIWGKAGKLDRA-AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            ++T+I  +   G+LD A A++ + + S G   D   Y T+I+   + G +  A+ L++E
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++    +PN I     I    + GR+EEA  V  +    G   +   + C+I    +++K
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + + +F  M S G  PD      ++    K+ +FE A  LY +M  EG V ++ + + 
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYN 533

Query: 476 ML 477
            L
Sbjct: 534 TL 535


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 59/477 (12%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ VL  +  A + ELA  LF+EM++ G+  D YTY+ ++  F K G+ + A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 75  SWLQQMEQDRVSGDLVLYSNLIEL---ARKLS-------------------DYS------ 106
            W  +M +   + ++V Y+ LI     A+K+S                    YS      
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 107 -------KAISIFSRLKSSGIVPDL----------------VAYNTMINVFGKAKLFKEA 143
                  KA  IF R+  S  VPD+                V Y  +++ F K+   +EA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           R L++ M  +G +P+ + Y  L++   +  K  EA  V  EM+E   P  L T + +ID 
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y ++     A ++   M +    P+VV Y  ++    +     EA  L ++M+ K  + N
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY  MI  +G   + E    L++ M ++G+ PN +TY  +I    K G LD A  L +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAG 379
           +++ +        Y+ +I  + +  +   +  LL E+ Q +T P  +     I  L +A 
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896

Query: 380 RIEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           R+E A  +  +   F A  V   S +  +IE      K     ++F +M   G  P+
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 247/574 (43%), Gaps = 44/574 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   +L+ +  E  Y PS   +N ++     +     A+ L  +M + G  P    Y+ L
Sbjct: 355 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 61  I--TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS-NLIELARKLSD---YSKAISIFSR 114
           I   C  K+ +    +   ++   + ++  +VL   N+    R L     Y KA S+   
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +   G +PD   Y+ ++N    A   + A LL EEM+  G+  D  +Y+ +++ + +   
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +A   F EM EV C  ++ T   +I  Y +      A+ LF +M   G  P++V+Y+ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 235 LLRVYGEAELFGEAIHLF-RLMQRKEIEQ---------------NVVTYNTMIKIYGKSL 278
           L+  + +A    +A  +F R+   K++                 NVVTY  ++  + KS 
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E+A  L+  M   G EPN I Y  +I    K GKLD A  +  ++   G       Y 
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I  Y +V     A ++L ++ +    PN +     I  L + G+ +EA  + +   + 
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   ++  +  MI+ F    K    +E+ E+M S G  P+     ++++   K    + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLS------LYGARKDFNMLESLFERLDSDSNINKKELH 508
            +L  EM+        Q H+   +      + G  K+F     L + +  D       ++
Sbjct: 834 HNLLEEMK--------QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVY 885

Query: 509 HVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            ++     +A RL  A R++  +    TF+++LV
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEV---ATFSATLV 916



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 197/470 (41%), Gaps = 29/470 (6%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   + +A      ++     P R TY+ LI  F K    DSA    ++M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D            K+  + +A+++   +++   VPD V Y  +I+   +A LF+E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+ V+YSTLL   +   +      V   M    C       N ++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGE-----AELFGEAIHLFRLMQ 256
            Y        A +L   M K G  P  V YN L+  + G+      +L   A   +  M 
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N +  ++  +    + ++EKA ++++EM  +G  P+  TYS ++     A K++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A +LF++++  G+  D   Y  M+ ++ + GL+  A++  +E+R+    PN +     I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A ++  A  +F      G + +I  +  +I+   +  +     ++FE+M  +   
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 433 PDSHI----------------IALVLNSYGKLREFETADDLYSEMQEEGC 466
           PD  +                   +L+ + K    E A  L   M  EGC
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 219/523 (41%), Gaps = 67/523 (12%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +D++N     S  P+V  Y+ +L   L  KQ      + + M   G  P    +++L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI--------ELARKLSDYSKAISIFSRL 115
           +   G    A   L++M +       V+Y+ LI         L   L D ++    +S +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE--KAYSEM 439

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            ++G+V + +  ++       A  +++A  +I EM  QG  PDT +YS +LN      K 
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             A  +F EM       D+ T  IM+D + +  + + A + F  MR++G  P        
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP-------- 551

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
                                      NVVTY  +I  Y K+ +   A  L + M + G 
Sbjct: 552 ---------------------------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG--VEID------------P--VLYQT 339
            PN +TYS +I    KAG++++A  +F+++  S    ++D            P  V Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  + +   V  A++LL  +     +PN I  +  I  L + G+++EA  V  +  + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               +  +  +I+ + + K+     +V  KM      P+  I   +++   K+ + + A 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            L   M+E+GC  +   +  M+  +G          L ER+ S
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 101/464 (21%), Positives = 187/464 (40%), Gaps = 44/464 (9%)

Query: 76  WLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +LQQ+  D   V G+ +  + L+    +   +S A+    RLK     P    YN +I  
Sbjct: 187 FLQQIRDDDKEVFGEFL--NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 244

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F KA     A L+  EM    ++ D  +         +  K+ EAL++    N V    D
Sbjct: 245 FLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---D 301

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                 +I    +  + ++A      MR     P+VV+Y+TLL      +  G    +  
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKA 312
           +M  +    +   +N+++  Y  S +H  A  L+++M   G  P  + Y+ +I +I G  
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421

Query: 313 GKL-----DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             L     D A   + ++ ++GV    VL +  + ++ R                     
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGV----VLNKINVSSFTRC-------------------- 457

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                  L  AG+ E+A  V R+    G + D S +  ++       K      +FE+M+
Sbjct: 458 -------LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
             G   D +   ++++S+ K    E A   ++EM+E GC  +   +  ++  Y   K  +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
               LFE + S+  +     +  +   + +A ++  A +I  RM
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 35/311 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  +++ Y+ ++    + K+ +LA  +  +M +   AP+   Y+ +I    K G  D
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +Q ME+     ++V Y+ +I+    +      + +  R+ S G+ P+ V Y  +I
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L+EEM++      T  Y  ++  +  N +F+E+L +  E+ + +  
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 879

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L+   ++ID     ++ K A RL  ++R +     V +++  L  Y            
Sbjct: 880 PFLSVYRLLID-----NLIK-AQRLEMALRLL---EEVATFSATLVDYSS---------- 920

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                         TYN++I+    + + E A  L  EM  +G+ P   ++ ++I    +
Sbjct: 921 --------------TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966

Query: 312 AGKLDRAAMLF 322
             K+  A +L 
Sbjct: 967 NSKISEALLLL 977



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 4/179 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   Y V++ +  +    ++AH L +EM+Q         Y  +I  F KE  F  ++ 
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLG 868

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK--SSGIVPDLVAYNTMINV 133
            L ++ QD  +  L +Y  LI+   K      A+ +   +   S+ +V     YN++I  
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              A   + A  L  EM ++GV P+  S+ +L+     N K  EAL +   ++ + CPL
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 987


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 199/461 (43%), Gaps = 7/461 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEM---RQRGIAPDRYTYSTLITCFGKEG 68
           E   +P V +YN +L+     K+ E A  L   M   + R   P+  +Y+T+I  F  EG
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A +   +M    +  ++V Y+ +I+   K     +A  +F ++   G+ PD   YN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +I+ +     +KE   ++EEM   G+KPD  +Y +LLN    N +  EA   F  M   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++    I+I  Y       +   L   M + G+ P    +N +   Y +  +  EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +H+F  M+++ +  +VV +  +I    K    + A     +M N G+ PN   +++++  
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
                K ++A   + ++ + G+  D V + T++      G V  A+RL+  +     +P+
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            I   T I      GRI+EA          G   D   +  ++  + R  +  +   VF 
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M   G  P     + +L+     R F  A +LY  M   G
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 239/600 (39%), Gaps = 93/600 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y  V+       Q + A+ LF EM  RGI P+  TY+T+I    K  + D A   
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            QQM    V  D   Y+ LI     +  + + + +   + + G+ PD   Y +++N    
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTL----------------LNLYVEN------HK 174
               +EAR   + M  +G+KP+   Y  L                LNL VEN      H 
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 175 FV-------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           F              EA+ +F +M +     D+     +ID   +L    DA   F  M 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P++  +N+L+      + + +A   +  M  + I  +VV +NT++       +  
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  L+  M+  G  P+ I+Y+T+I      G++D AA     + S G++ D   Y T++
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA------------- 384
             Y R G +  A  +  E+ +    P  +   T +  L    R  EA             
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 385 --TWVFR----------------QAFDAGEVKD----ISVFGCMIELFSRNKKYANVIEV 422
              W++                 + F +   KD    I+ F  MI    ++ +  + + +
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 423 FEKMRSAGYFPDSHIIALV---LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           F  + S G  PD     L+   L   G L EF   DDL+S M++ G   + ++   ++  
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEF---DDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 480 YGARKDFNMLESLFERLDSD-------------SNINKKELHHVVAGIYERANRLNDASR 526
              R D     +   +LD               S +++ E HH    + E+   LN+A +
Sbjct: 738 LLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAKK 797



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/551 (22%), Positives = 235/551 (42%), Gaps = 25/551 (4%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-------QWELAHGLFDEMRQRG---IA 51
           ++ + D +   AR   S+ A+N +L  V R         + EL   LF+ M +     + 
Sbjct: 33  ALKLFDGLLTHAR-PASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           PD  TYS LI CF + G  +   +    + +     + ++ + L++         +A+ I
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 112 F-SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE-QG--VKPDTVSYSTLLN 167
              R+   G  PD+V+YNT++  F   K  +EA  L+  M + QG    P+ VSY+T++N
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +    +  +A ++F EM +     ++ T   +ID   +  +   A+ +F  M   G+ P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              +YN L+  Y     + E + +   M    ++ +  TY +++     +    +A    
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M  +GI+PN   Y  +I  +   G L     L   +  +G+  D  ++  +  AY + 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            ++  A  + ++++Q    P+ +     I  L + GR+++A   F Q  + G   +I VF
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++       K+    E + +M + G  PD      +L +     +   A  L   M+ 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 464 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE---LHHVVAGIYERANR 520
            G    D + +   +L G       ++   + LD   ++  K     ++ +   Y RA R
Sbjct: 512 VG-TRPDVISYT--TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 521 LNDASRIMNRM 531
           ++DA  +   M
Sbjct: 569 IDDAYGVFREM 579



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 6/421 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP    +N++     +    + A  +F++M+Q+G++PD   +  LI    K G  D
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVD 430

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    QM  + V+ ++ ++++L+     +  + KA   +  + + GI PD+V +NT++
Sbjct: 431 DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL 490

Query: 132 -NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            N+  K ++ K  RL I+ M   G +PD +SY+TL+  +    +  EA      M  V  
Sbjct: 491 CNLCTKGQVMKAQRL-IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N ++  Y +     DA  +F  M + GI P VV+Y+T+L        F EA  
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+  M     + N+  YN ++    K+   ++A  L Q + ++  +    T++ +I    
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K+G+ + A  LF  + S G+  D   Y  +       G +     L   + +  T P   
Sbjct: 670 KSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR 729

Query: 371 AITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
            +  L R     G I  A     +  +     + S    +I L SR++ + +   + EK 
Sbjct: 730 MLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKY 789

Query: 427 R 427
           R
Sbjct: 790 R 790


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 226/512 (44%), Gaps = 43/512 (8%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  + EEA   P   AY V++    R  + + A  L DEM + G+  + +  ++LI  +
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G    A   + +M    +  D   Y+ L++   +    S+A ++  ++   GI P +
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + YNT++    +   F +A  +   M + GV PD V YSTLL+   +   F  A +++ +
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +          T N MI    ++    +A+ +F  M+ +G  P  ++Y TL+  Y +A  
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            G+A  +   M+R+ I  ++  YN++I    KS    + T+L+ EM  RG+ PN +TY  
Sbjct: 558 VGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGA 617

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
           +I  W K G LD+A   + ++  +G+  + ++  TM+    R+G +  A  L+ ++    
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677

Query: 363 ----------------------------------PNTIPRETAITILARAGRIEEATWVF 388
                                             PN I    AI  L + G++++A   F
Sbjct: 678 FFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF---EKMRSAGYFPDSHIIALVLNSY 445
                 G V D   +  +I  +S      NV E F   ++M   G  P+      ++N  
Sbjct: 738 SMLSLKGFVPDNFTYCTLIHGYS---AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            K    + A  L+ ++ ++G +F + V +  L
Sbjct: 795 CKSENVDRAQRLFHKLHQKG-LFPNVVTYNTL 825



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 211/455 (46%), Gaps = 7/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+ + N +L N+++  +   AH ++ +M + GI PD +  S ++  F K+G  D A  +
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++ME   V  ++V Y +LI     L D   A  +   +   G+  ++V Y  +I  + K
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 137 AKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
                EA  ++  M+E+  + PD  +Y  L++ Y    K  +A+ +  EM  +    +L 
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            CN +I+ Y +     +A+ +   M    + P   SYNTLL  Y       EA +L   M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++ IE  V+TYNT++K   +    + A  +   M   G+ P+ + YST++    K    
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENF 488

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
           + A+ L++ + + G     + + TMI    ++G +  A+ +  +++     P+ I   T 
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548

Query: 372 ITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           I    +A  + +A  V + A +   +   I ++  +I    ++++     ++  +M   G
Sbjct: 549 IDGYCKASNVGQAFKV-KGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             P+      +++ + K    + A   Y EM E G
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 212/484 (43%), Gaps = 36/484 (7%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++F  N ++    +  +   A G+   M    + PD Y+Y+TL+  + +EG    A +  
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M Q+ +   ++ Y+ L++   ++  +  A+ I+  +   G+ PD V Y+T+++   K 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
           + F+ A  L +++  +G     ++++T+++   +  K VEA  +F +M ++ C  D  T 
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
             +ID Y +      A ++  +M +  I PS+  YN+L+    ++    E   L   M  
Sbjct: 546 RTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI 605

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +  N+VTY  +I  + K    +KA +   EM   G+  N I  ST+++   + G++D 
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 318 AAMLFQKLRSSGVEIDP--------------------------------VLYQTMIVAYE 345
           A +L QK+   G   D                                 ++Y   I    
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 346 RVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           + G V  A+R    L     +P      T I   + AG ++EA  +  +    G V +I 
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  +I    +++       +F K+   G FP+      +++ Y K+   + A  L  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 462 QEEG 465
            EEG
Sbjct: 846 IEEG 849



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 178/405 (43%), Gaps = 33/405 (8%)

Query: 8   WINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           W +  AR ++ S   +N ++  + +  +   A  +FD+M+  G +PD  TY TLI  + K
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
                 A      ME++ +S  + +Y++LI    K     +   + + +   G+ P++V 
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL------------NLYVE--- 171
           Y  +I+ + K  +  +A     EM E G+  + +  ST++            NL ++   
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 172 NHKFVE-------------ALSVFAEMNEVNCPLDLTTCNIM--IDVYGQLDMAK--DAD 214
           +H F               A+   A+  + +C   L   NI+  I + G     K  DA 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           R F  +   G  P   +Y TL+  Y  A    EA  L   M R+ +  N+VTYN +I   
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            KS   ++A  L  ++  +G+ PN +TY+T+I  + K G +D A  L  K+   G+    
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAG 379
           V Y  +I    + G +  + +LL+++ +     +      L + G
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGG 899



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/449 (21%), Positives = 201/449 (44%), Gaps = 24/449 (5%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           + VLRN+       L  G F  + +Q+   P+  +Y  L+    +  M+D   ++L Q+ 
Sbjct: 72  DAVLRNLRLNPTASL--GFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV 129

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
                 DL  + +     R    + + + ++     S  V D++     + V+ +  L K
Sbjct: 130 ------DLCKFKD-----RGNVIWDELVGVYREFAFSPTVFDMI-----LKVYVEKGLTK 173

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  + + M + G  P   S ++LLN  V+N +   A  V+ +M  V    D+   +IM+
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + + +     +A      M  +G++P++V+Y++L+  Y        A  + + M  K + 
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAM 320
           +NVVTY  +IK Y K  + ++A  +++ MQ    + P+   Y  +I  + + GK+D A  
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILA 376
           L  ++   G++ +  +  ++I  Y + G +  A+ ++  +     +P++    T +    
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R G   EA  +  +    G    +  +  +++   R   + + ++++  M   G  PD  
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEG 465
             + +L+   K+  FE A  L+ ++   G
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARG 502



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F Y  ++     A   + A  L DEM +RG+ P+  TY+ LI    K    D A 
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               ++ Q  +  ++V Y+ LI+   K+ +   A  +  ++   GI P +V Y+ +IN  
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            K    + +  L+ +M + GV    + Y TL+    +   + E     A    +NC
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNC 920


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 59/477 (12%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ VL  +  A + ELA  LF+EM++ G+  D YTY+ ++  F K G+ + A 
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497

Query: 75  SWLQQMEQDRVSGDLVLYSNLIEL---ARKLS-------------------DYS------ 106
            W  +M +   + ++V Y+ LI     A+K+S                    YS      
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557

Query: 107 -------KAISIFSRLKSSGIVPDL----------------VAYNTMINVFGKAKLFKEA 143
                  KA  IF R+  S  VPD+                V Y  +++ F K+   +EA
Sbjct: 558 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 617

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           R L++ M  +G +P+ + Y  L++   +  K  EA  V  EM+E   P  L T + +ID 
Sbjct: 618 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 677

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y ++     A ++   M +    P+VV Y  ++    +     EA  L ++M+ K  + N
Sbjct: 678 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 737

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VVTY  MI  +G   + E    L++ M ++G+ PN +TY  +I    K G LD A  L +
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 797

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAG 379
           +++ +        Y+ +I  + +  +   +  LL E+ Q +T P  +     I  L +A 
Sbjct: 798 EMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 855

Query: 380 RIEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           R+E A  +  +   F A  V   S +  +IE      K     ++F +M   G  P+
Sbjct: 856 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 912



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 247/574 (43%), Gaps = 44/574 (7%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R   +L+ +  E  Y PS   +N ++     +     A+ L  +M + G  P    Y+ L
Sbjct: 314 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372

Query: 61  I--TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS-NLIELARKLSD---YSKAISIFSR 114
           I   C  K+ +    +   ++   + ++  +VL   N+    R L     Y KA S+   
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432

Query: 115 LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           +   G +PD   Y+ ++N    A   + A LL EEM+  G+  D  +Y+ +++ + +   
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492

Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
             +A   F EM EV C  ++ T   +I  Y +      A+ LF +M   G  P++V+Y+ 
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 552

Query: 235 LLRVYGEAELFGEAIHLF-RLMQRKEIEQ---------------NVVTYNTMIKIYGKSL 278
           L+  + +A    +A  +F R+   K++                 NVVTY  ++  + KS 
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             E+A  L+  M   G EPN I Y  +I    K GKLD A  +  ++   G       Y 
Sbjct: 613 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           ++I  Y +V     A ++L ++ +    PN +     I  L + G+ +EA  + +   + 
Sbjct: 673 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 732

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G   ++  +  MI+ F    K    +E+ E+M S G  P+     ++++   K    + A
Sbjct: 733 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 792

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLS------LYGARKDFNMLESLFERLDSDSNINKKELH 508
            +L  EM+        Q H+   +      + G  K+F     L + +  D       ++
Sbjct: 793 HNLLEEMK--------QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVY 844

Query: 509 HVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
            ++     +A RL  A R++  +    TF+++LV
Sbjct: 845 RLLIDNLIKAQRLEMALRLLEEV---ATFSATLV 875



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 197/470 (41%), Gaps = 29/470 (6%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   + +A      ++     P R TY+ LI  F K    DSA    ++M  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D            K+  + +A+++   +++   VPD V Y  +I+   +A LF+E
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 279

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+ V+YSTLL   +   +      V   M    C       N ++ 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEA-----ELFGEAIHLFRLMQ 256
            Y        A +L   M K G  P  V YN L+  + G+      +L   A   +  M 
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  N +  ++  +    + ++EKA ++++EM  +G  P+  TYS ++     A K++
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
            A +LF++++  G+  D   Y  M+ ++ + GL+  A++  +E+R+    PN +     I
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
               +A ++  A  +F      G + +I  +  +I+   +  +     ++FE+M  +   
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 433 PDSHI----------------IALVLNSYGKLREFETADDLYSEMQEEGC 466
           PD  +                   +L+ + K    E A  L   M  EGC
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 219/523 (41%), Gaps = 67/523 (12%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +D++N     S  P+V  Y+ +L   L  KQ      + + M   G  P    +++L+  
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI--------ELARKLSDYSKAISIFSRL 115
           +   G    A   L++M +       V+Y+ LI         L   L D ++    +S +
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAE--KAYSEM 398

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            ++G+V + +  ++       A  +++A  +I EM  QG  PDT +YS +LN      K 
Sbjct: 399 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 458

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             A  +F EM       D+ T  IM+D + +  + + A + F  MR++G  P        
Sbjct: 459 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP-------- 510

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
                                      NVVTY  +I  Y K+ +   A  L + M + G 
Sbjct: 511 ---------------------------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG--VEID------------P--VLYQT 339
            PN +TYS +I    KAG++++A  +F+++  S    ++D            P  V Y  
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 340 MIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
           ++  + +   V  A++LL  +     +PN I  +  I  L + G+++EA  V  +  + G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
               +  +  +I+ + + K+     +V  KM      P+  I   +++   K+ + + A 
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
            L   M+E+GC  +   +  M+  +G          L ER+ S
Sbjct: 724 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 766



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 187/459 (40%), Gaps = 34/459 (7%)

Query: 76  WLQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           +LQQ+  D   V G  +  + L+    +   +S A+    RLK     P    YN +I  
Sbjct: 146 FLQQIRDDDKEVFGQFL--NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 203

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           F KA     A L+  EM    ++ D  +         +  K+ EAL++    N V    D
Sbjct: 204 FLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---D 260

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                 +I    +  + ++A      MR     P+VV+Y+TLL      +  G    +  
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 320

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKA 312
           +M  +    +   +N+++  Y  S +H  A  L+++M   G  P  + Y+ +I +I G  
Sbjct: 321 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG-- 378

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
              D+ ++ F  L     ++    Y  M+ A    G+V             N I   +  
Sbjct: 379 ---DKDSLNFDLL-----DLAEKAYSEMLAA----GVVL------------NKINVSSFT 414

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L  AG+ E+A  V R+    G + D S +  ++       K      +FE+M+  G  
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
            D +   ++++S+ K    E A   ++EM+E GC  +   +  ++  Y   K  +    L
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           FE + S+  +     +  +   + +A ++  A +I  RM
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 35/311 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  +++ Y+ ++    + K+ +LA  +  +M +   AP+   Y+ +I    K G  D
Sbjct: 661 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 720

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +Q ME+     ++V Y+ +I+    +      + +  R+ S G+ P+ V Y  +I
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L+EEM++      T  Y  ++  +  N +F+E+L +  E+ + +  
Sbjct: 781 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 838

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L+   ++ID     ++ K A RL  ++R +     V +++  L  Y            
Sbjct: 839 PFLSVYRLLID-----NLIK-AQRLEMALRLL---EEVATFSATLVDYSS---------- 879

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                         TYN++I+    + + E A  L  EM  +G+ P   ++ ++I    +
Sbjct: 880 --------------TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 925

Query: 312 AGKLDRAAMLF 322
             K+  A +L 
Sbjct: 926 NSKISEALLLL 936



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 4/179 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   Y V++ +  +    ++AH L +EM+Q         Y  +I  F KE  F  ++ 
Sbjct: 770 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLG 827

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK--SSGIVPDLVAYNTMINV 133
            L ++ QD  +  L +Y  LI+   K      A+ +   +   S+ +V     YN++I  
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 887

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              A   + A  L  EM ++GV P+  S+ +L+     N K  EAL +   ++ + CPL
Sbjct: 888 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 946


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 174/389 (44%), Gaps = 8/389 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P V  YN +L  + +  +   A  LF  M   GI P   TY+TLI  F K   F+
Sbjct: 94  ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
           +A   LQ M   + S  +  Y ++I    K     +A  +F  +K +G  PD V YNT+I
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +     +   EA+ L+  M E G +PD ++++ L+       +  EA  +F  M +  C 
Sbjct: 214 HGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 273

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP-SVVSYNTLLRVYGEAELFGEAIH 250
            DL T  +++    +L + +        +R     P +V+ Y  + R  G    F  A  
Sbjct: 274 PDLVTHTVLVS---KLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAAR 330

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M R+ +  NVVTY    K  G   E  +A    + M  +GIEP+ + Y+ ++  + 
Sbjct: 331 LLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFC 390

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTI 366
           KA +LD A  + + +  SG+  + V Y T++  + R G V     LLH +    RQP+  
Sbjct: 391 KADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVA 450

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAG 395
              T +  L   G+ + A      A   G
Sbjct: 451 TWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 2/338 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  +PS   Y  ++    +  Q+E A+GL   M  R  +P  Y+Y ++I    K    
Sbjct: 128 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 187

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++M+      D V Y+ LI          +A  + + +  +G  PD + +  +
Sbjct: 188 DQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTAL 247

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I         KEA +L + M +QG  PD V+++ L++      K   ALSV    N   C
Sbjct: 248 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVV--RNYPAC 305

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
           P  +     +    G+      A RL   M + G+ P+VV+Y    +  G+ +    A  
Sbjct: 306 PEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYR 365

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            FR M  + IE ++V YN ++  + K+   + A  +++ M   G+ PN +TY+T++    
Sbjct: 366 EFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 425

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           + GK++    L   + S G + D   + T++     VG
Sbjct: 426 RKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVG 463



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 157/353 (44%), Gaps = 26/353 (7%)

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           V  N ++++  +A+  ++  ++   +  Q  KP+ +SY  L+       K  +A S  AE
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M       D+ T N++ID   +      A   F +M     +P VV+YNTLL    +   
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A  LF  M+   I  + VTY T+I ++ K  + E A  L+Q M +R   P   +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
           II    K  K+D+A  LF++++ +G + D V Y T+I      GL    K+ LHE +   
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI-----HGLC--VKQRLHEAKDLL 229

Query: 362 --------QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
                   QP+ I     I  L    RI+EA  +F+     G   D+     ++      
Sbjct: 230 TVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIL 289

Query: 414 KKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETADDLYSEMQEEG 465
           +K    + V   +R+    P++ I+   +    G+ R F+ A  L  +M   G
Sbjct: 290 RKLRPALSV---VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 158/380 (41%), Gaps = 14/380 (3%)

Query: 92  YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
           Y  L++   +     KA S  + +    +VPD+  YN +I+   KA+    A    E M 
Sbjct: 38  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 97

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCNIMIDVYGQLDMA 210
           E    PD V+Y+TLL    +N +  +A S+F  M      P D+T    +IDV+ ++   
Sbjct: 98  E----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTY-TTLIDVFCKMCQF 152

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           + A  L   M      P+V SY +++    +     +A  LF  M+    + + VTYNT+
Sbjct: 153 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 212

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I          +A +L+  M   G +P+ IT++ +I       ++  A +LFQ +   G 
Sbjct: 213 IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 272

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI--TILARAGR---IEEAT 385
             D V +  ++    ++ ++   +  L  +R     P    +   I    GR    + A 
Sbjct: 273 APDLVTHTVLV---SKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAA 329

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            + ++    G   ++  +    +     K+       F +M   G  PD     ++++ +
Sbjct: 330 RLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 389

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    + A+ +   M + G
Sbjct: 390 CKADRLDMAEKMVRYMDQSG 409



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 95/213 (44%), Gaps = 1/213 (0%)

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VT N ++ +  ++   E+   + + + ++  +PNA++Y  ++    + GK+D+A     +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEA 384
           +    +  D   Y  +I    +   ++ A      + +P+ +   T +  L + GR+ +A
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             +F     AG       +  +I++F +  ++     + + M S    P  +    ++N 
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             K R+ + A  L+ EM+  GC   D+V +  L
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCK-PDRVTYNTL 212


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 236/506 (46%), Gaps = 24/506 (4%)

Query: 12  EARYSPSVFAYNVVLRNVL-------RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           E+ + P+     +V  N+L       R K+ E+A GL  +  +  I PD    + LI+  
Sbjct: 69  ESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIA-GLVSKFGKHNIFPDTIALTQLISKL 127

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            + G  + A + L  +       D    + L+    K  ++ K   +  ++K   I P +
Sbjct: 128 CRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTV 187

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQG------VKPDTVSYSTLLNLYVENHKFVEA 178
           + +  +IN   K +   +A  + E+M+ +       V PDT+ Y+TL++   +  +  EA
Sbjct: 188 ITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEA 247

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +  +M    C     T N +I+ Y +    + A +LF  M    I+P+V++ NTL+  
Sbjct: 248 LCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDG 307

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
             +      A+  FR+MQ+K ++ N VTY   I  +       KA   + EM   G  P+
Sbjct: 308 MCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPD 367

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           A+ Y T+I    +AG+LD A+ +  KL+ +G  +D V Y  +I  + +   +  A+  L+
Sbjct: 368 AVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLN 427

Query: 359 ELR----QPNTIPRETAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRN 413
           E+     +P+++   T I+  ++ G  + A  ++ +   + G    +  +G +I  +  N
Sbjct: 428 EMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLN 487

Query: 414 KKYANVIEVFEKMR--SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
                 I++F++M   ++   P++ I  ++++S  K  +   A  L  +M+  G V  + 
Sbjct: 488 NNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRG-VMPNT 546

Query: 472 VHFQMLSLYGARKDFNMLESLFERLD 497
             +   S++ A +D N L+  F+ +D
Sbjct: 547 TTYN--SIFKALRDKNWLDKAFKLMD 570



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 12/349 (3%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           + +P+   +N ++    R+ + E+AH LF+EM    I P+  T +TL+    K     +A
Sbjct: 258 QCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTA 317

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           + + + M+Q  + G+ V Y+  I     +++ +KA+     +   G  PD V Y T+I  
Sbjct: 318 VEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICG 377

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +A    +A  ++ +++E G   D V Y+ L++ + + +K   A     EM       D
Sbjct: 378 LAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPD 437

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKM----GIDPSVVSYNTLLRVYGEAELFGEAI 249
             T N +I  + ++   K A +    M+KM    G+ P+V +Y  L+  Y       EAI
Sbjct: 438 SVTYNTLISYFSKIGNFKLAHKF---MKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAI 494

Query: 250 HLFRLMQR--KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            +F+ M     ++  N V YN +I    K  +   A +L+ +M+ RG+ PN  TY++I  
Sbjct: 495 KIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFK 554

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
                  LD+A  L  ++       D   Y TM +  E +  V    +L
Sbjct: 555 ALRDKNWLDKAFKLMDRMVEQACNPD---YITMEILTEWLSAVGEITKL 600



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 3/276 (1%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
            Y V +           A    DEM + G  PD   Y TLI    + G  D A S + ++
Sbjct: 335 TYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKL 394

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           ++     D V Y+ LI    K +   +A    + ++ +G+ PD V YNT+I+ F K   F
Sbjct: 395 KEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNF 454

Query: 141 KEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV--NCPLDLTTC 197
           K A   +++M  E+G+ P   +Y  L++ Y  N+   EA+ +F EMN V    P +    
Sbjct: 455 KLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIY 514

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           NI+ID   +      A  L   M+  G+ P+  +YN++ +   +     +A  L   M  
Sbjct: 515 NILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +    + +T   + +      E  K     Q   NR
Sbjct: 575 QACNPDYITMEILTEWLSAVGEITKLKKFTQGCMNR 610



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 21/98 (21%), Positives = 46/98 (46%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           N  ++  P+   YN+++ ++ +  Q   A  L D+M+ RG+ P+  TY+++      +  
Sbjct: 502 NVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNW 561

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
            D A   + +M +   + D +    L E    + + +K
Sbjct: 562 LDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITK 599



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 2/120 (1%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGK 66
           + EE   SP+VF Y  ++         + A  +F EM      + P+   Y+ LI    K
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCK 523

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           +   + A+S L  M+   V  +   Y+++ +  R  +   KA  +  R+      PD + 
Sbjct: 524 QTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 200/424 (47%), Gaps = 11/424 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +N  +  + +  +   A  L D M  RG  P+ +TY  L+    + G  D A   
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 77  LQQMEQDRVSGDLVLYSNLIE--LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           L ++    V    VL++ LI   ++R   D +KA+ +   + S G  PD+  YNT+I   
Sbjct: 363 LNKVPNPNV----VLFNTLINGYVSRGRLDEAKAV-MHESMLSVGCGPDIFTYNTLILGL 417

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K      AR L+ EM+ +G +P+ ++Y+ L++ + +  +  EA +V  EM+     L+ 
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
              N +I    + +  +DA  +F  M   G  P + ++N+L+    +   F EA+ L++ 
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + +  N +TYNT+I  + +    ++A  L+ +M  RG   + ITY+ +I    +AG 
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRET 370
           +++   LF+ + S G+  + +    +I    R G + HA    + ++H    P+ +   +
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I  L + GR +EA  +F +    G   D   +  +I    +   + +   +  +   +G
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717

Query: 431 YFPD 434
           + P+
Sbjct: 718 FIPN 721



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +F YN ++  + +      A  L +EM+ +G  P+  TY+ LI  F KEG  + A +
Sbjct: 404 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 463

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +M    ++ + V Y+ LI    K      A+++F  + S G  PD+  +N++I    
Sbjct: 464 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 523

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K   F+EA  L ++M  +GV  +T++Y+TL++ ++      EAL +  +M    CPLD  
Sbjct: 524 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 583

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I    +    +    LF  M   G++P+ +S N L+           A+   R M
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  ++VTYN++I    K+   ++A NL  ++Q  GI P+AITY+T+I+   K G  
Sbjct: 644 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 703

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           D A +L  +   SG   + V +  ++  + + G
Sbjct: 704 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 236/524 (45%), Gaps = 19/524 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +YNVVL  +L     ++   +F EM  +GI+P  YT+  ++         DSA + 
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M +     + ++Y  LI    K+   ++ + +   +   G +PD+  +N  I+   K
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L++ M  +G  P++ +Y  L++      K  EA  +   +N+V  P ++  
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML---LNKVPNP-NVVL 373

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N +I+ Y   G+LD AK    +  SM  +G  P + +YNTL+    +      A  L  
Sbjct: 374 FNTLINGYVSRGRLDEAKAV--MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            MQ K  E NV+TY  +I  + K    E+A N++ EM  +G+  NA+ Y+ +I+   K  
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRE 369
           K+  A  +F  + S G + D   + ++I    +V     A    + +L E    NTI   
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551

Query: 370 TAITILARAGRIEEA-TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           T I    R G ++EA   V    F    + DI+  G +I+   R       + +FE M S
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG-LIKALCRAGNIEKGLALFEDMMS 610

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
            G  P++    +++N   +    + A +   +M   G +  D V +  L + G  K    
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG-LTPDIVTYNSL-INGLCKTGRA 668

Query: 489 LES--LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNR 530
            E+  LF++L  +        ++ +   + +    +DA  +++R
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 712



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 172/362 (47%), Gaps = 1/362 (0%)

Query: 16  SPSVFAYNVVLRN-VLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           +P+V  +N ++   V R +  E    + + M   G  PD +TY+TLI    K+G   SA 
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + +M+      +++ Y+ LI+   K     +A ++   +   G+  + V YN +I+  
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +  ++A  +  +M  +G KPD  ++++L+    + +KF EAL ++ +M       + 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  + +    ++A +L   M   G     ++YN L++    A    + + LF  
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  N ++ N +I    ++   + A   +++M +RG+ P+ +TY+++I    K G+
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
              A  LF KL+  G+  D + Y T+I  + + G+   A  LL        IP E    I
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727

Query: 375 LA 376
           L 
Sbjct: 728 LV 729



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/482 (21%), Positives = 195/482 (40%), Gaps = 46/482 (9%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ +  W   +  Y      Y +++  +  A +++    L  +M+Q GI      +  ++
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIM 171

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI-SIFSRLKSSGI 120
             +G+ G+   A   L  M             N++       +  K + ++F  + S GI
Sbjct: 172 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 231

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P +  +  ++           A  L+++M   G  P+ + Y TL          + ALS
Sbjct: 232 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTL----------IHALS 281

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
               +NEV                          +L   M  MG  P V ++N  +    
Sbjct: 282 KVGRVNEVL-------------------------KLLEEMLLMGCIPDVNTFNDAIHGLC 316

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +     EA  L   M  +    N  TY  ++    +  + ++A  L+ ++ N    PN +
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVV 372

Query: 301 TYSTIIAIWGKAGKLDRA-AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            ++T+I  +   G+LD A A++ + + S G   D   Y T+I+   + G +  A+ L++E
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           ++    +PN I     I    + GR+EEA  V  +    G   +   + C+I    +++K
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + + +F  M S G  PD      ++    K+ +FE A  LY +M  EG V ++ + + 
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYN 551

Query: 476 ML 477
            L
Sbjct: 552 TL 553


>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 670

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 214/489 (43%), Gaps = 5/489 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V + NVV+  + + + W  A  +F   R  G+ P+ Y  +TLI   G       A+   +
Sbjct: 182 VRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFR 241

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            ME+  +   +  ++ L+    + +    A+ +F  ++  GIVPD + +  +++    A 
Sbjct: 242 WMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAG 301

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           L+  A+  I+ M+ +G       Y  +        K  EA  +F  M E    L L + N
Sbjct: 302 LWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYN 361

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            ++  Y +    +DA R F  ++  G+ P V+S+++L+     A     A+ +   M+  
Sbjct: 362 ALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTS 421

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
           + + NVV++  ++K Y K+   EKA  +   M + G  PN + + ++++ + K  +  + 
Sbjct: 422 DCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKV 481

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
               +KL   G+++D V + T I A  + G    A+    ++ +    PN +   + I  
Sbjct: 482 LYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKA 541

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GYFP 433
               G  E+A  VF+     G   +      ++  + + K+   VI  FE M    G  P
Sbjct: 542 YGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEP 601

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
           D +  A +  +     E++ A      M+  GC     ++  ++++Y A    +    + 
Sbjct: 602 DKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVL 661

Query: 494 ERLDSDSNI 502
           ER+ S S I
Sbjct: 662 ERMGSGSLI 670



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 185/431 (42%), Gaps = 72/431 (16%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           +++ +  W+ E+A     +F +N ++    R    + A  LF+EM + GI PDR T++ L
Sbjct: 235 QALKLFRWM-EKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGL 293

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDL------------------------VL----- 91
           ++     G++D A S++  M+    S  L                        V+     
Sbjct: 294 VSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGY 353

Query: 92  ------YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
                 Y+ L+    + + +  A+  F  ++  G+ PD+++++++I+    A   + A  
Sbjct: 354 ELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALE 413

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP-------------- 191
           ++E M+    +P+ VS+  LL  Y +   + +A  +F  M +  CP              
Sbjct: 414 VLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYE 473

Query: 192 ---------------------LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
                                LD+   +  I    +    + A+  F  M K G  P++V
Sbjct: 474 KGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIV 533

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +Y++L++ YG+  L+ +A  +F+LM R  I  N      +++ YGK  E EK     + M
Sbjct: 534 TYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESM 593

Query: 291 QNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           + + G+EP+   Y+ I       G+  RA     ++  +G   D V+Y T+I  YE  G 
Sbjct: 594 EPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQ 653

Query: 350 VAHAKRLLHEL 360
           +  A ++L  +
Sbjct: 654 IDKAMQVLERM 664



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/424 (19%), Positives = 182/424 (42%), Gaps = 39/424 (9%)

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           +G+  D+ + N ++   G+ + +  A  +    R  GV+P+    +TL+       +  +
Sbjct: 176 TGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQ 235

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           AL +F  M +      + T N ++   G+      A  LF  M K+GI P  +++  L+ 
Sbjct: 236 ALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVS 295

Query: 238 VYGEAELFG-----------------------------------EAIHLFRLMQRKEIEQ 262
               A L+                                    EA  LF++M  +  E 
Sbjct: 296 ATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYEL 355

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            + +YN ++  Y ++ + E A      +Q++G+ P+ +++S++I+    AG+ +RA  + 
Sbjct: 356 KLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVL 415

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA---G 379
           +++++S  + + V +  ++ AY++ G    A+ + H +      P E A   L  A   G
Sbjct: 416 ERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKG 475

Query: 380 R-IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           R  ++  +   +  + G   D+  +   I   ++  ++    E F++M  +G  P+    
Sbjct: 476 RQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTY 535

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           + ++ +YG +  +E A+ ++  M   G   + Q    +L  YG  K+   +   FE ++ 
Sbjct: 536 SSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEP 595

Query: 499 DSNI 502
              +
Sbjct: 596 QYGV 599



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 4/317 (1%)

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           +NE    +D+ + N+++   GQ+     A ++F + R  G++P+     TL+   G    
Sbjct: 173 VNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRR 232

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A+ LFR M++  IE+ + T+N ++   G+    + A  L +EM+  GI P+ IT++ 
Sbjct: 233 LSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTG 292

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH-ELRQP 363
           +++    AG  DRA      +++ G  I    Y  M  A  R      A  L    L Q 
Sbjct: 293 LVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQG 352

Query: 364 NTIPRETAITILA---RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             +  E+   +L    R  + E+A   F    D G   D+  +  +I   +   +    +
Sbjct: 353 YELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERAL 412

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           EV E+M+++   P+      +L +Y K   +E A++++  M + GC  ++     +LS Y
Sbjct: 413 EVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAY 472

Query: 481 GARKDFNMLESLFERLD 497
              + +  +    E+L+
Sbjct: 473 EKGRQWKKVLYTIEKLE 489


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 202/445 (45%), Gaps = 12/445 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    +  ++R +    +   A  LFD+M   G  P+  TY TLI    K G   +AI
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 190

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+ MEQ     D+V+Y+++I+   K    ++A ++FS++   GI PD+  Y ++++  
Sbjct: 191 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                +K    L+ +M    + PD V +ST+++   +  K  EA  +   M +     D+
Sbjct: 251 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 310

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   ++D +       +A ++F  M + G  P V+SY TL+  Y +     +A++LF  
Sbjct: 311 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 370

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RKE   +  TYNT++         + A  L  EM  RG  P+ +TYS ++    K   
Sbjct: 371 MCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH 430

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
           L+ A  L + + +S +  D  +Y  +I    R G +  A+ L   L      P+      
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR----NKKYANVIEVFEKM 426
            I  L + G + EA  +F +     +  D S  GC     +R    N +    I++ E+M
Sbjct: 491 MIHGLCKRGLLNEANKLFMEM----DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546

Query: 427 RSAGYFPDSHIIALVLNSYGKLREF 451
            + G+  DS  + L + S    R F
Sbjct: 547 LARGFSADSCFLMLSVLSEDDRRYF 571



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 168/350 (48%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P V  Y  ++ ++ + +Q   A  LF +M  +GI+PD +TY++L+        +
Sbjct: 197 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 256

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
               + L QM   ++  D+V++S +++   K    ++A  I   +   G+ PD+V Y T+
Sbjct: 257 KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 316

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++         EA  + + M  +G  PD +SY+TL+N Y + HK  +A+ +F EM     
Sbjct: 317 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 376

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N ++     +   +DA  LF  M   G  P +V+Y+ LL    +     EA+ 
Sbjct: 377 IPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMA 436

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + ++   +  ++  YN +I    ++ E E A +L   + ++G+ P+  TY+ +I    
Sbjct: 437 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 496

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           K G L+ A  LF ++  +    D   Y T+   + +      A +LL E+
Sbjct: 497 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/497 (21%), Positives = 216/497 (43%), Gaps = 4/497 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ +      P    ++ L+T   K   + + +S   QM+   V  ++   + LI     
Sbjct: 53  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 112

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L+    A S+ +++   G  PD   + T+I          EA  L ++M ++G +P+ V+
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +   M + NC  D+     +ID   +     +A  LF  M 
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P + +Y +L+        +     L   M   +I  +VV ++T++    K  +  
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 292

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  ++  M  RG+EP+ +TY+T++       ++D A  +F  +   G   D + Y T+I
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  L  E+ +    P+T    T +  L   GR+++A  +F +    G++
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +++   +N+     + + + + ++   PD  +  ++++   +  E E A DL
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           +S +  +G   S   +  M+     R   N    LF  +D +        ++ +A  + +
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532

Query: 518 ANRLNDASRIMNRMNKR 534
            N    A +++  M  R
Sbjct: 533 NNETLRAIQLLEEMLAR 549



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 202/455 (44%), Gaps = 6/455 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS+  +  +L ++ + K +     L  +M   G+ P+ YT + LI  F        A S 
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F ++   G  P++V Y T+IN   K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M +   +PD V Y+++++   ++ +  EA ++F++M       D+ T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              ++     L   K    L   M    I P VV ++T++    +     EA  +  +M 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E +VVTY T++  +    E ++A  +   M  +G  P+ I+Y+T+I  + K  K+D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAI 372
           +A  LF+++       D   Y T++     VG +  A  L HE+    + P+ +     +
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 373 TILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
             L +   +EEA     +A +A  +  DI V+  +I+   R  +     ++F  + S G 
Sbjct: 423 DSLCKNRHLEEAM-ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
            P      ++++   K      A+ L+ EM    C
Sbjct: 482 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 54/113 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  +P +  YN+++  + RA + E A  LF  +  +G+ P  +TY+ +I    K G+ 
Sbjct: 442 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 501

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           + A     +M+ +  S D   Y+ +     + ++  +AI +   + + G   D
Sbjct: 502 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554


>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 367

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 188/366 (51%), Gaps = 1/366 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ R  P+   Y +VL  + RA     A  LFDEM   G+    ++++++I  + ++G+F
Sbjct: 2   QKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLF 61

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNT 129
             A    + M +  +  D +  S L+    K       A  IFS++K +GI+P +  YNT
Sbjct: 62  KKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNT 121

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +++V  +    +  + L  EM+   V P+ ++++TLL ++V+  +  EA  V+  + +  
Sbjct: 122 LLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAG 181

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
               + T   ++ +Y +    K+A  +F  MR++G  P ++ Y+ ++ VYG+A    EA 
Sbjct: 182 LKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAA 241

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +FR +Q      NVVT+  +I+ +G   + ++      EM   G  P+   Y+ ++  +
Sbjct: 242 LVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAY 301

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           G+ G   +AA+LF+++++ G+  + V Y TMI AY      A A+ +L ++ +    P  
Sbjct: 302 GRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPDR 361

Query: 370 TAITIL 375
           ++  +L
Sbjct: 362 SSRAML 367



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 178/333 (53%), Gaps = 5/333 (1%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  +F  + SSG+   L ++N+MI  + +  LFK+A  + E+M E G++ D ++ STLL
Sbjct: 28  QARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMYEDMVESGIQADEITLSTLL 87

Query: 167 NLYVENHKFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +   +    VE A  +F+++ E      + T N ++ V  +    +    L   M+++ +
Sbjct: 88  SGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEV 147

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+++++NTLL ++ +     EA  +++ +    ++  VVTY  ++++Y ++ +H++A  
Sbjct: 148 VPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAIE 207

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           +  EM+  G +P+ + YS +I+++GKAG  + AA++F++L++ G   + V +  +I A+ 
Sbjct: 208 VFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFG 267

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS 401
             G +       +E+     +P  T   ++     R G   +A  +FR+    G   +  
Sbjct: 268 WQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAV 327

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            +  MI+ +  +K+ A+   V ++M  AG+ PD
Sbjct: 328 SYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 164/345 (47%), Gaps = 32/345 (9%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+   Y  ++ V G+A L  +AR L +EM   GV+    S+++++  Y     F +A  +
Sbjct: 8   PNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRM 67

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           + +M E     D  T + ++   G+  +  + A+++F  +++ GI P V +YNTLL V  
Sbjct: 68  YEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLS 127

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                     L   MQR E+  N++T+NT++ ++ +    ++A  + Q + + G++P  +
Sbjct: 128 RGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVV 187

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TY+ ++ ++ +A K   A  +F ++R  G + D ++Y  MI  Y                
Sbjct: 188 TYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVY---------------- 231

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
                           +AG  EEA  VFRQ  + G + ++  + C+I+ F    K   + 
Sbjct: 232 ---------------GKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIG 276

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
             F +M ++G  PD  +  +++ +YG+      A  L+  MQ +G
Sbjct: 277 AFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQG 321



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 158/320 (49%), Gaps = 5/320 (1%)

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           ++K  + P+  +Y  +L V G A L  +A  LF  M    +E  + ++N+MI  Y +   
Sbjct: 1   VQKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGL 60

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG-KLDRAAMLFQKLRSSGVEIDPVLYQ 338
            +KA  + ++M   GI+ + IT ST+++  GK    ++ A  +F K++ +G+      Y 
Sbjct: 61  FKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120

Query: 339 TMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDA 394
           T++    R G     K L  E+++    PN I   T + +  + GR++EA  V+++  DA
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    +  +  +++++ R  K+   IEVF +MR  G  PD  I +L+++ YGK    E A
Sbjct: 181 GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEA 240

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
             ++ ++Q +G + +      ++  +G +     + + F  + +   +    L++V+ G 
Sbjct: 241 ALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGA 300

Query: 515 YERANRLNDASRIMNRMNKR 534
           Y R      A+ +  RM  +
Sbjct: 301 YGRYGHSVQAAILFRRMQAQ 320



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 165/380 (43%), Gaps = 32/380 (8%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
           +KP+  +Y+ +L +       ++A  +F EM      + L + N MI  Y +  + K A 
Sbjct: 6   LKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAW 65

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE-AIHLFRLMQRKEIEQNVVTYNTMIKI 273
           R++  M + GI    ++ +TLL   G+ +L  E A  +F  ++   I   V TYNT++ +
Sbjct: 66  RMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSV 125

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
             +    E+   L  EMQ   + PN IT++T++ +  + G+L  AA ++Q++  +G++  
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
            V Y  ++  Y                                RA + +EA  VF +   
Sbjct: 186 VVTYTGLVQMY-------------------------------CRASKHKEAIEVFLEMRR 214

Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
            G   D+ ++  MI ++ +         VF ++++ GY P+      ++ ++G   + + 
Sbjct: 215 VGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQE 274

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
               ++EM   GC+    ++  M+  YG          LF R+ +         +  +  
Sbjct: 275 IGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQ 334

Query: 514 IYERANRLNDASRIMNRMNK 533
            Y  + +  DA  ++++M +
Sbjct: 335 AYCHSKQAADAQIVLDQMTR 354


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 199/461 (43%), Gaps = 7/461 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEM---RQRGIAPDRYTYSTLITCFGKEG 68
           E   +P V +YN +L+     K+ E A  L   M   + R   P+  +Y+ +I  F  EG
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEG 217

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A +   +M    +  ++V Y+ +I+   K     +A  +F ++   G+ PD   YN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +I+ +     +KE   ++EEM   G+KPD  +Y +LLN    N +  EA  +F  M   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               ++    I+I  Y       +   L   M + G+ P    +N +   Y +  +  EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           +H+F  M+++ +  +VV Y  +I    K    + A     +M N G+ PN   +++++  
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
                K ++A   + ++ + G+  D V + T++      G V  A+RL+  + +  T P 
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPG 517

Query: 369 ETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
             + T L       GRI+EA          G   D   +  ++  + R  +  +   VF 
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +M   G  P     + +L+     R F  A +LY  M   G
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/600 (22%), Positives = 235/600 (39%), Gaps = 93/600 (15%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y +V+       Q + A+ LF EM  RGI P+  TY+T+I    K  + D A   
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            QQM    V  D   Y+ LI     +  + + + +   + + G+ PD   Y +++N    
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EAR L + M  +G+KP+   Y  L++ Y       E   +   M E     D   
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            NI+   Y +  M  +A  +F  M++ G+ P VV+Y  L+    +     +A+  F  M 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA----------------- 299
            + +  N+  +N+++       + EKA     EM N+GI P+                  
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 300 ------------------ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                             I+Y+T+I      G++D AA     + S G++ D   Y T++
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA------------- 384
             Y R G +  A  +  E+ +    P  +   T +  L    R  EA             
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 385 --TWVFR----------------QAFDAGEVKD----ISVFGCMIELFSRNKKYANVIEV 422
              W++                 + F +   KD    I+ F  MI    ++ +  + + +
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 423 FEKMRSAGYFPDSHIIALV---LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
           F  + S G  PD     L+   L   G L EF   DDL+S M++ G   + ++   ++  
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEF---DDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 480 YGARKDFNMLESLFERLDSD-------------SNINKKELHHVVAGIYERANRLNDASR 526
              R D     +   +LD               S +++ E HH    + E+   LN+A +
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAKK 797



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/555 (23%), Positives = 236/555 (42%), Gaps = 33/555 (5%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-------QWELAHGLFDEMRQRG---IA 51
           ++ + D +   AR   SV A+N +L  V R         + EL   LF+ M +     + 
Sbjct: 33  ALKLFDGLLTHAR-PASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           PD  TYS LI CF + G  +   +    + +     + ++ + L++         +A+ I
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 112 F-SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE-QG--VKPDTVSYSTLLN 167
              R+   G  PD+V+YNT++  F   K  +EA  L+  M + QG    P+ VSY+ ++N
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +    +  +A ++F EM +     ++ T   +ID   +  +   A+ +F  M   G+ P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              +YN L+  Y     + E + +   M    ++ +  TY +++     +    +A  L 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M  +GI+PN   Y  +I  +   G L     L   +  +G+  D  ++  +  AY + 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            ++  A  + ++++Q    P+ +     I  L + GR+++A   F Q  + G   +I VF
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDS---HIIALVLNSYGKLREFETADDLYSE 460
             ++       K+    E + +M + G  PD    + I   L + G++ + +   DL   
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 461 MQEEGCVFSDQVHFQMLSLYG----ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
           +     V S         L G    A K  +++ S+   L  D       LH      Y 
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV--GLKPDEWTYNTLLHG-----YC 564

Query: 517 RANRLNDASRIMNRM 531
           RA R++DA  +   M
Sbjct: 565 RAGRIDDAYGVFREM 579



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 6/421 (1%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   SP    +N++     +    + A  +F++M+Q+G++PD   Y  LI    K G  D
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVD 430

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    QM  + V+ ++ ++++L+     +  + KA   +  + + GI PD+V +NT++
Sbjct: 431 DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL 490

Query: 132 -NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            N+  K ++ K  RL I+ M   G +P  +SY+TL+  +    +  EA      M  V  
Sbjct: 491 CNLCTKGQVMKAQRL-IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N ++  Y +     DA  +F  M + GI P VV+Y+T+L        F EA  
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L+  M     + N+  YN ++    K+   ++A  L Q + ++  +    T++ +I    
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K+G+ + A  LF  + S G+  D   Y  +       G +     L   + +  T P   
Sbjct: 670 KSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR 729

Query: 371 AITILAR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
            +  L R     G I  A     +  +     + S    +I L SR++ + +   + EK 
Sbjct: 730 MLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKY 789

Query: 427 R 427
           R
Sbjct: 790 R 790



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 41/349 (11%)

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH-L 251
           D  T +I+I  + ++   +     F  + K G   + +  N LL+   +A+   EA+  L
Sbjct: 93  DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM---QNRGIEPNAITYSTIIAI 308
            + M       +VV+YNT++K +      E+A  L+  M   Q R   PN ++Y+ +I  
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
           +   G++D+A  LF ++   G+                               QPN +  
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGI-------------------------------QPNVVTY 241

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
            T I  L +A  ++ A  VF+Q  D G   D   + C+I  +    K+  V+ + E+M +
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 429 AGYFPDSHIIALVLN---SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
            G  PD +    +LN   + G+ RE   A  L+  M  +G   +  ++  ++  Y  +  
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCRE---ARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
            + +  L   +  +       + +++   Y +   +++A  I N+M ++
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 197/412 (47%), Gaps = 17/412 (4%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           +R ++ A     A  + +EM+  G +PD  ++  LI  F K G F    S L +M +  +
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             + +LY+NLI    K    ++A S   R+      P++V+YN +I+ + KA+  ++A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            + EM E G  P   +YS+++  + +     +A+ VFAEM    C  D+   N+++    
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +     +A  LF SM   G  P VV+YNT++    + +   EA+ L   M+++++    V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG--KAGKLDRAAMLFQ 323
           TY T+I    K    ++A  + ++M           YS +I I G  KA +   A  +FQ
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR---------LLHELRQPNTIPRETAITI 374
           ++R  G+    V Y T++      GL++ AK          +L ++  PN    E  I+ 
Sbjct: 300 EMRGRGISPTVVTYNTLL-----EGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISS 354

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
           L +  ++EEA  +     D G V  + ++  ++   +R  +  +  E++++M
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 20/363 (5%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V +YN+++    +A+  E A     EM + G  P  + YS+++  F K G    A+ 
Sbjct: 95  APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMD 154

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       D+V ++ L+    +     +A  +F  + S G  PD+V YNTMI    
Sbjct: 155 VFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 214

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K   EA  L+E M+++ V P  V+Y+TL++   +  +  +A  VF +M E  CP    
Sbjct: 215 KWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEP 274

Query: 196 TCNIMIDVYGQLDMAK--DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             +++I + G     +  +A  +F  MR  GI P+VV+YNTLL          +A+ L  
Sbjct: 275 AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTY 334

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  +    N+ TY  +I    K+ + E+A  L+  M+++G  P+   +  +++   +AG
Sbjct: 335 FMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAG 394

Query: 314 KLDRAAMLFQKLR---------SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +LD A  L++++          SS + +D +L         R G V  AK  L ++    
Sbjct: 395 RLDDAFELYKEMSRINCQQLVGSSNILLDGIL---------RRGSVDEAKDFLKQMTDTG 445

Query: 365 TIP 367
            +P
Sbjct: 446 IVP 448



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 202/441 (45%), Gaps = 10/441 (2%)

Query: 3   VAILDWINEEARY---SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           VA  + I EE +Y   SP V ++ +++R   ++  ++      D M + G+ P+   Y+ 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI+C  K GM   A S+L++M Q   + ++V Y+ +I+   K  +  KA++    ++  G
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             P   AY++++  F K     +A  +  EM  +G +PD V+++ LL+      K  EA 
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F  MN   C  D+ T N MI    +     +A  L   M++  + P+ V+Y TL+   
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG--KSLEHEKATNLMQEMQNRGIEP 297
            +     +A  +F  M           Y+ +I I G  K+    +A  + QEM+ RGI P
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             +TY+T++       KL  A  L   +       +   Y+ +I +  +   V  A +LL
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368

Query: 358 HELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
             +R    +P     E  ++ LARAGR+++A  ++++       + +     +++   R 
Sbjct: 369 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 428

Query: 414 KKYANVIEVFEKMRSAGYFPD 434
                  +  ++M   G  PD
Sbjct: 429 GSVDEAKDFLKQMTDTGIVPD 449



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 159/316 (50%), Gaps = 4/316 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  +NV+L  + RA++   A  LF  M  RG  PD  TY+T+I    K    D A+  
Sbjct: 166 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 225

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI--NVF 134
           L++M+Q+ VS   V Y+ LI+   K +   +A  +F ++          AY+ +I  N  
Sbjct: 226 LERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGL 285

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV-FAEMNEVNCPLD 193
            KA+   EA+ + +EMR +G+ P  V+Y+TLL   +   K  +A+ + +  +++V  P +
Sbjct: 286 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAP-N 344

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T  I+I    + D  ++A +L  +MR  G  PS+  +  LL     A    +A  L++
Sbjct: 345 MFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYK 404

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M R   +Q V + N ++    +    ++A + +++M + GI P+  TY  ++      G
Sbjct: 405 EMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 464

Query: 314 KLDRAAMLFQKLRSSG 329
           K D+A  L ++L   G
Sbjct: 465 KADQARKLVEELVRDG 480



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 136/349 (38%), Gaps = 67/349 (19%)

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A L  +A  ++EEM+  G  PD  S+  L+  + ++  F    S               
Sbjct: 6   EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCS--------------- 50

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
                     QLD           M + G+ P+ + YN L+    +A +  EA    + M
Sbjct: 51  ----------QLD----------RMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM 90

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    NVV+YN +I  Y K+   EKA   ++EM+  G  P    YS+I+  + K G +
Sbjct: 91  P-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNV 149

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
            +A  +F ++ + G E D V +  ++                                 L
Sbjct: 150 SKAMDVFAEMPAKGCEPDIVNFNVLLSG-------------------------------L 178

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            RA +I EA  +FR     G   D+  +  MI    + KK    + + E+M+     P  
Sbjct: 179 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 238

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARK 484
                +++   K    + A +++ +M E  C  ++  +  ++ + G  K
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCK 287


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 213/479 (44%), Gaps = 34/479 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN++L+ +  A + + AH LFDEM      PD  TY  ++  +      ++AI  L +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +  + V Y+++I L       S A+ +   +   G+V D   + T+++ F +    
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             AR   +EM+++G+  D V+Y+ L+N      +  EA  V  EM +    +D  T  ++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID Y ++    +A  +   M +  + P+VV+Y  L     +      A  L   M  K +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E N+ TYN++I    K+   E+A   M +M   G++P+  TY+TII    ++ +LDRA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L Q++   G++   V Y  ++  +   G V   KRLL  + + N  P  T    L +   
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           IE                               K   +  E+++ M S    P+ +   +
Sbjct: 612 IE-------------------------------KNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           ++  + K R  + A   +SEM E+G   +   +  ++ L   +K F     LFE++  D
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKD 699



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 194/421 (46%), Gaps = 4/421 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P V  Y +++       + E A  L  EM  RG+  +   Y+++I     EG  
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  ++ M    V  D  +++ ++    +  D + A + F  ++  G+  D V Y  +
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   +A   KEA  +++EM ++G+  D V+Y+ L++ Y +  K  EA  V  +M +   
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T   + D   +      A+ L   M   G++ ++ +YN+L+    +A    +A+ 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M    ++ +V TY T+I    +S E ++A +L+QEM ++GI+P  +TY+ ++  + 
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            +G+++    L + +    +  +   Y +++  Y     +     +   +     +P E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              IL     +A  ++EA +   +  + G     S +  +I L ++ KK+     +FEKM
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 427 R 427
           R
Sbjct: 697 R 697



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 153/316 (48%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  ++  + RA + + A  +  EM  +G+  D  TY+ LI  + K G    A     +M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           Q RV+ ++V Y+ L +   K  D   A  +   + S G+  ++  YN++IN   KA   +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A   + +M E G+KPD  +Y+T++    ++ +   A S+  EM +      + T N+++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +      +   RL   M +  I P+  +YN+L++ Y   +       +++ M  +E+ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N  TYN +IK + K+   ++A     EM  +G    A +Y+ +I +  K  K   A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 322 FQKLRSSGVEIDPVLY 337
           F+K+R   +  +P +Y
Sbjct: 693 FEKMRKDRLTAEPDVY 708



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/426 (20%), Positives = 186/426 (43%), Gaps = 19/426 (4%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A+ +F  L       +  +YN ++     A   K+A  L +EM      PD V+Y  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMV 292

Query: 167 NLYVENHKFVEALSVFAEMN----EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + Y    +   A+ + +EM     E+N P+  T+   ++   GQ+    DA R+   M  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELN-PVAYTSVIALLCDEGQV---SDAVRVVEDMVM 348

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+      + T++  +        A + F  MQ++ +  + VTY  +I    ++ E ++
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  ++QEM+++G++ +A+TY+ +I  + K GK+  A ++  K+    V  + V Y  +  
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 343 AYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              + G V  A  LLHE+       N     + I  L +AG +E+A        +AG   
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +I    ++K+      + ++M   G  P      +++N +      E    L 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
             M E+    +   +  ++  Y   K+      +++ + S   +  +  ++++   + +A
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 519 NRLNDA 524
             + +A
Sbjct: 649 RNMKEA 654



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 120/262 (45%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R +P+V  Y  +   + +      A+ L  EM  +G+  + +TY++LI    K G  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  +  M++  +  D+  Y+ +I    +  +  +A S+   +   GI P +V YN ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F  +   +  + L+E M E+ + P+T +Y++L+  Y           ++  M      
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T NI+I  + +    K+A      M + G   +  SYN L+R+  + + F EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 252 FRLMQRKEIEQNVVTYNTMIKI 273
           F  M++  +      YN  I +
Sbjct: 693 FEKMRKDRLTAEPDVYNFYIDL 714


>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Glycine max]
          Length = 875

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 238/512 (46%), Gaps = 43/512 (8%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           ++R + R K+ ELA  LF+E R RG     Y++S +I+  G+   F  A+S L+ M    
Sbjct: 195 MIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGNFG 254

Query: 85  VSGDLVLYSNLIELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
           +  +LV Y+ +I+   K    +   +     + ++G +PD + YN+++        ++  
Sbjct: 255 LEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLC 314

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKF-VEALSVFAEMNEVNCPLDLTTCNIMID 202
           R L+ EM  +G+  D  +Y+T ++   +  +  +   ++  EM   N   ++ T + ++ 
Sbjct: 315 RDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMA 374

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            Y + +  +DA  ++  M+ + I    VSYNTL+ +Y     F EA+  F+ M+   I+ 
Sbjct: 375 GYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKN 434

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +VVTYN +I+ YG+  ++ +   L  EM+ R I PN +TYST+I I+ K      A  ++
Sbjct: 435 DVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVY 494

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 382
           ++L+  G++ D V Y  +I A  + GL+  + RLL  + +  + P       +  A RI 
Sbjct: 495 RELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFRIG 554

Query: 383 EATWVFRQAFD------------------AGEVKDISVFGC-----MIE--------LFS 411
           +       A D                  AG  +D           M+E        L  
Sbjct: 555 QQLPALECAVDTSFQANEHQIKPSSSRLSAGNFQDQKTGNNDEIMKMLEQLAAEKAGLMK 614

Query: 412 RNKKYAN----VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           ++K+       ++++F+KM+     P+    + +LN+      F+ A  L   +    C+
Sbjct: 615 KDKRSRQDSFYLVQIFQKMQEMEIKPNVVTFSAILNACSCCETFQDASKLLDAL----CM 670

Query: 468 FSDQVH--FQMLSLYGARKDFNMLESLFERLD 497
           F   V+     L +   +  +N  ++LF+ L+
Sbjct: 671 FDSHVYGVAHGLLMGHGQGLWNQAQTLFDELE 702



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 146/290 (50%), Gaps = 34/290 (11%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN +L+  +   +W+L   L  EM  +GI  D YTY+T +    K G  D     
Sbjct: 293 PDRLTYNSLLKTCVAKGRWQLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMD----- 347

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
                                LAR   D          + +  I+P++V Y+T++  + K
Sbjct: 348 ---------------------LARHAIDV--------EMPAKNILPNVVTYSTLMAGYSK 378

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A+ F++A  + +EM+   ++ D VSY+TL+ LY     F EA+  F EM       D+ T
Sbjct: 379 AERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVT 438

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+ YG+ +   +  +LF  M+   I P+ ++Y+TL+++Y +  ++ EA+ ++R ++
Sbjct: 439 YNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELK 498

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           ++ ++ +VV Y+ +I    K+   E +  L+  M  +G  PN +TY++II
Sbjct: 499 QEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSII 548



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 12/353 (3%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L SN+I    +L     A+++F   ++ G    + +++ MI+  G+   F EA  L+  M
Sbjct: 191 LTSNMIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSM 250

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNEVNCPLDLTTCNIMIDVY---GQ 206
              G++P+ V+Y+ +++   +     E +  F  EM    C  D  T N ++      G+
Sbjct: 251 GNFGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGR 310

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL-MQRKEIEQNVV 265
             + +D   L   M   GI   V +YNT +    +      A H   + M  K I  NVV
Sbjct: 311 WQLCRD---LLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVV 367

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY+T++  Y K+   E A N+  EM++  I  + ++Y+T++ ++   G  + A   F+++
Sbjct: 368 TYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEM 427

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
              G++ D V Y  +I  Y R       ++L  E++     PN +   T I I  +    
Sbjct: 428 ECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMY 487

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            EA  V+R+    G   D+  +  +I+   +N    + + + + M   G  P+
Sbjct: 488 AEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPN 540



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELA-HGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           V+ YN  +  + +  + +LA H +  EM  + I P+  TYSTL+  + K   F+ A++  
Sbjct: 330 VYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIY 389

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M+   +  D V Y+ L+ L   L  + +A+  F  ++  GI  D+V YN +I  +G+ 
Sbjct: 390 DEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRH 449

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             + E R L +EM+ + + P+ ++YSTL+ +Y +   + EA+ V+ E+ +     D+   
Sbjct: 450 NKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFY 509

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
           + +ID   +  + + + RL   M + G  P+VV+YN+++  +
Sbjct: 510 SALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAF 551



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 122/309 (39%), Gaps = 76/309 (24%)

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           + ++R  G  +    A++LF   + +     V +++ MI   G++    +A +L++ M N
Sbjct: 193 SNMIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGN 252

Query: 293 RGIEPNAITYSTIIAIWGKA------------------------------------GKLD 316
            G+EPN +TY+ II    K                                     G+  
Sbjct: 253 FGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQ 312

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG---LVAHAKRLLHELRQ--PNTIPRETA 371
               L  ++   G+  D   Y T + A  + G   L  HA  +    +   PN +   T 
Sbjct: 313 LCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTL 372

Query: 372 ITILARAGRIEEATWVF-----------RQAFDA---------------GEVKDISVFG- 404
           +   ++A R E+A  ++           R +++                G+ K++   G 
Sbjct: 373 MAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGI 432

Query: 405 --------CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                    +IE + R+ KY  V ++F++M++   +P+    + ++  Y K R +  A D
Sbjct: 433 KNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMD 492

Query: 457 LYSEMQEEG 465
           +Y E+++EG
Sbjct: 493 VYRELKQEG 501


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS- 72
           R  P++  +N+ +  + +A +   A  + ++++  G +P+  TY+TLI    K+G     
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKM 254

Query: 73  --AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A + L++M  +++  + + ++ LI+   K  +   A + F  ++  G+ P++V YN++
Sbjct: 255 YRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSL 314

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN         EA  L ++M   G+KP+ V+++ L+N + +     EA  +F ++ E + 
Sbjct: 315 INGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL 374

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N MID + +  M ++   L  SM   GI P+V +YN L+      +    A  
Sbjct: 375 VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M+  E++ +VVTYN +I  + K  E  KA  L+ EM N G++PN +TY+T++  + 
Sbjct: 435 LLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYC 494

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             G L  A  +  ++   G   + V Y  +I  + + G +  A RLL+E+ +    P  T
Sbjct: 495 MEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRT 554

Query: 371 AITIL 375
              ++
Sbjct: 555 TYDVV 559



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 202/429 (47%), Gaps = 20/429 (4%)

Query: 114 RLKSSGIVPDLV--AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
           R  ++ ++ D++  AY T + +    ++F+        +++ G K    S + LL+  V+
Sbjct: 125 RPCANALITDMLVLAYVTNLEIHSACEVFRR-------VQDYGFKLSLNSCNPLLSALVK 177

Query: 172 NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
            ++  E   V+ EM +     +LTT NI I+   +      A+ +   ++  G  P++V+
Sbjct: 178 GNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVT 237

Query: 232 YNTLLRVY---GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           YNTL+  +   G A     A  + + M   +I  N +T+NT+I  + K      A N  +
Sbjct: 238 YNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFE 297

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EMQ +G++PN +TY+++I      GKLD A  L+ K+   G++ + V +  +I  + +  
Sbjct: 298 EMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK 357

Query: 349 LVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           ++  A++L  ++ +    PN I   T I    +AG +EE   +     D G   ++S + 
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           C+I    RN+      ++  +M +     D     +++  + K  E   A+ L  EM   
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL--HHVVAGIYERANRLN 522
           G V  + V +  L + G   + N+  +L  R   +    +  +  ++V+   + +  +L 
Sbjct: 478 G-VKPNHVTYNTL-MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLE 535

Query: 523 DASRIMNRM 531
           DA+R++N M
Sbjct: 536 DANRLLNEM 544



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 170/355 (47%), Gaps = 11/355 (3%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN---HKFV 176
           I P+L  +N  IN   KA    +A  +IE+++  G  P+ V+Y+TL++ + +     K  
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255

Query: 177 EALSVFAEM--NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
            A ++  EM  N++ CP ++T  N +ID + + +    A   F  M++ G+ P++V+YN+
Sbjct: 256 RADAILKEMLANKI-CPNEITF-NTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313

Query: 235 LLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRG 294
           L+          EAI L+  M    ++ N+VT+N +I  + K    ++A  L  ++  + 
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK 354
           + PNAIT++T+I  + KAG ++    L   +   G+  +   Y  +I    R   V  AK
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 355 RLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELF 410
           +LL+E+     + + +     I    + G   +A  +  +  + G   +   +  +++ +
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 411 SRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
                    ++V  +M   G   +     +++  + K  + E A+ L +EM E+G
Sbjct: 494 CMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 9   INEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           +NE   Y     V  YN+++    +  +   A  L  EM   G+ P+  TY+TL+  +  
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           EG   +A+    QME++    ++V Y+ LI+   K      A  + + +   G+ P+   
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
           Y+ +             RL   EM E+G  PD
Sbjct: 556 YDVV-------------RL---EMLEKGFIPD 571


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 211/463 (45%), Gaps = 4/463 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN ++    RA Q + A G+ D M++ G+ P+  TY+  I  + +    + A    +
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M ++ V  D+V  S L+    +   +S+A ++F  +   G VP+ V Y T+I+   KA 
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAG 323

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             KE   L+ EM  +GV  D V+Y+ L++   +  K  E           N  L+  T  
Sbjct: 324 RGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYT 383

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++ID   +     +A+++   M +  I P+VV++++++  + +  L  +A    R+M+ +
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  NVVTY T+I  + K    + A  +  +M   G+E N     +++    + GK++ A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEA 503

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITI 374
             LF+    SG+ +D V Y T+I    + G +  A +   EL   N +P        I  
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   G+ +EA  +  +  + G   D S +  MI    R  + A  +++  +M+ +   P+
Sbjct: 564 LCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
                 ++         E A  L +EM   G   S   H ++L
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 205/459 (44%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P+V  Y  ++    + +  + A  ++ +M   G+  +++   +L+    + G  
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++  +      +S D V Y+ LI+   K  D   A      L    ++PD V YN  
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN       FKEA+ ++ EMR  G+KPD  +Y+T++  +    +  +AL +  EM   + 
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L T N ++         + A  L   M   G  PS +++  +L+   ++      + 
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M    +  ++  YNT++++        KAT +++EM   GI P+ IT++ +I    
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K+  LD A   + ++    +  +   + T++   E VG +  A  +L E+     +PN +
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +  +T   +     EA  ++ +    G V  +S +  +I  F++        E+F+ M
Sbjct: 801 TYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +  G  P S    ++++ + ++R          +M+E+G
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 255/577 (44%), Gaps = 56/577 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            +LD + +EA   P+V  Y   +    R K  E A  L++ M + G+  D  T S L+  
Sbjct: 225 GVLDMM-KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             ++G F  A +  ++M++     + V Y  LI+   K     + +S+   + S G+V D
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           LV Y  +++  GK     E +  +       +  + V+Y+ L++   + H   EA  V  
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 184 EMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL----- 235
           EM E +   ++ T + +I+ +   G LD A +  R+   M++ GI+P+VV+Y TL     
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM---MKERGINPNVVTYGTLIDGFF 460

Query: 236 --------LRVYGEAELFG----------------------EAIHLFRLMQRKEIEQNVV 265
                   L VY +    G                      EA+ LF+      +  + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            Y T+I    K+ +   A    QE+ +R + P+A+ Y+  I      GK   A  +  ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R+ G++ D   Y TMIV++ R G  A A +LLHE++    +PN I   T +  L   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI---I 438
           E+A ++  +   AG          +++  S++++   ++++ E M +AG   D  +   +
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERL 496
             VL  +G  R+   A  +  EM   G +  D + F  L L   +     N   +  + L
Sbjct: 701 LQVLCYHGMTRK---ATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + + N    + ++ G+ E   R+ +A  ++  M K
Sbjct: 757 HQNISPNIATFNTLLGGL-ESVGRIGEAGTVLIEMEK 792



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/563 (23%), Positives = 245/563 (43%), Gaps = 61/563 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P+  AYN++L     A   + AH   +  EM +RG+  D  T +TL+    + G  D+A 
Sbjct: 101 PTTVAYNILL-----AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 75  SWLQQMEQDRVSG----DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +       DR  G    D++ ++ LI    ++ D   A+S+  R+ + G+  D+V YNT+
Sbjct: 156 AL-----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTL 210

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE------------------- 171
           +  F +A     AR +++ M+E GV P+  +Y+  +  Y                     
Sbjct: 211 VAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270

Query: 172 ----------------NHKFVEALSVFAEMNEVNC-PLDLTTCNIMIDVYGQLDMAKDAD 214
                           + +F EA ++F EM++V   P  +T C  +ID   +    K+  
Sbjct: 271 LLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCT-LIDSLAKAGRGKELL 329

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
            L   M   G+   +V+Y  L+   G+     E     R      +  N VTY  +I   
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDAL 389

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
            K+   ++A  ++ EM+ + I PN +T+S++I  + K G LD+A    + ++  G+  + 
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T+I  + +      A  + H++     + N    ++ +  L + G+IEEA  +F+ 
Sbjct: 450 VTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKD 509

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
           A  +G   D   +  +I+   +        +  +++      PD+ +  + +N    L +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGK 569

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELH 508
           F+ A  + +EM+  G +  DQ  +  + +   RK      L+ L E   S    N    +
Sbjct: 570 FKEAKSILTEMRNMG-LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 509 HVVAGIYERANRLNDASRIMNRM 531
            +VAG++     +  A  ++N M
Sbjct: 629 TLVAGLFG-TGAVEKAKYLLNEM 650



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/484 (21%), Positives = 217/484 (44%), Gaps = 19/484 (3%)

Query: 3   VAILDWINEEAR---------------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ 47
            A++DW+ ++ +                S +   Y V++  + +A   + A  +  EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           + I+P+  T+S++I  F K G+ D A  + + M++  ++ ++V Y  LI+   K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ ++  +   G+  +    ++++N   +    +EA  L ++    G+  D V+Y+TL++
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +      A     E+ + N   D    N+ I+    L   K+A  +   MR MG+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              +YNT++  +       +A+ L   M+   I+ N++TYNT++     +   EKA  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM + G  P+++T+  ++    ++ +LD    + + + ++G+  D  +Y T++      
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G+   A  +L E+      P+TI     I    ++  ++ A   + Q        +I+ F
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++       +      V  +M  +G  P++    +++  +GK      A  LY EM  
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVG 827

Query: 464 EGCV 467
           +G V
Sbjct: 828 KGFV 831



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 167/379 (44%), Gaps = 35/379 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YNV +  +    +++ A  +  EMR  G+ PD+ TY+T+I    ++G    A+  
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------------- 122
           L +M+   +  +L+ Y+ L+          KA  + + + S+G  P              
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 123 ---------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                D+  YNT++ V     + ++A +++EEM   G+ PDT++
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++ L+  + ++     A + +A+M   N   ++ T N ++     +    +A  +   M 
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G++P+ ++Y+ L+  +G+     EA+ L+  M  K     V TYN +I  + K+    
Sbjct: 792 KSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L ++MQ RG+ P + TY  +++ W +           + ++  G          + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 342 VAYERVGLVAHAKRLLHEL 360
            A+ + G+   A+RLL  L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 128/279 (45%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            A +SPS   +  VL+   ++++ ++   + + M   G+  D   Y+TL+      GM  
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L++M    ++ D + ++ LI    K S    A + ++++    I P++  +NT++
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                     EA  ++ EM + G++P+ ++Y  L+  + +    VEA+ ++ EM      
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             ++T N +I  + +  M   A  LF  M+K G+ P+  +Y+ L+  +       E    
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKC 891

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
            + M+ K    +  T + + + + K     +A  L++ +
Sbjct: 892 LKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 114/253 (45%), Gaps = 1/253 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I +W+     ++  +  YN +L+ +        A  + +EM   GIAPD  T++ LI   
Sbjct: 681 IHEWMMNAGLHA-DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K    D+A +   QM    +S ++  ++ L+     +    +A ++   ++ SG+ P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + Y+ ++   GK     EA  L  EM  +G  P   +Y+ L++ + +     +A  +F +
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +        T +I++  + ++    +  +    M++ G  PS  + + + R + +  +
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 245 FGEAIHLFRLMQR 257
             +A  L + + R
Sbjct: 920 TWQAQRLLKNLYR 932



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 97/208 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +N ++    ++   + A   + +M  + I+P+  T++TL+      G    A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME+  +  + + Y  L+    K S+  +A+ ++  +   G VP +  YN +I+ F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA +  +A+ L ++M+++GV P + +Y  L++ +       E      +M E        
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           T + +   + +  M   A RL  ++ ++
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 636

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + + + E+  Y P    Y  ++  + + KQ E AH LF  M   G      +Y+ L+
Sbjct: 138 ALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALL 197

Query: 62  TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + +G+ G+ D A S L++M+++     D+  YS LI+   ++  + KA ++ S ++S GI
Sbjct: 198 SAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGI 257

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P+ + YNT+I+ +GKAK+F+E    L++ + +Q  +PD  + ++ L  +  + +     
Sbjct: 258 SPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETME 317

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + +         + T N+++D YG+    K    +   M+K     ++++YN ++  +
Sbjct: 318 KCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAF 377

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    +  +LFRLM+ + I+ + VT  ++++ YG++ + EK   +++ ++N  I  + 
Sbjct: 378 GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDT 437

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           + ++ ++  +G+ G       +   +   G   D + Y+TMI AY   G+  H K L
Sbjct: 438 VFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKEL 494



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 6/325 (1%)

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y  +I + GK K  ++A  L + M  +G      SY+ LL+ Y  +    +A S+  EM 
Sbjct: 158 YIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMK 217

Query: 187 E-VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
              +C  D+ T +I+I    Q+     A  L  +M  +GI P+ ++YNTL+  YG+A++F
Sbjct: 218 RNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMF 277

Query: 246 GE-AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            E    L +++ ++  E +V T N+ ++ +G S + E      ++ Q  GIEP+ +T++ 
Sbjct: 278 EEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNV 337

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           ++  +GKAG   + + + + ++        + Y  +I A+ R G +   + L   +R   
Sbjct: 338 LLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSER 397

Query: 365 TIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
             P    +  L RA     + E+   V R   ++    D   F C+++ + R   +A + 
Sbjct: 398 IKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMK 457

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSY 445
            V   M   GY PD      ++ +Y
Sbjct: 458 GVLILMEQKGYRPDKITYRTMIKAY 482



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 157/347 (45%), Gaps = 42/347 (12%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           ++ ++L+ +       P V  Y++++++ ++   ++ A  L   M   GI+P+  TY+TL
Sbjct: 208 KAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTL 267

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I  +GK  MF+   + L +M                                  L     
Sbjct: 268 IDAYGKAKMFEEMEATLVKM----------------------------------LSQQNC 293

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            PD+   N+ +  FG +   +      E+ +  G++P  ++++ LL+ Y +   + +  +
Sbjct: 294 EPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSA 353

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           V   M + +    + T NI+ID +G+    K  + LF  MR   I PS V+  +L+R YG
Sbjct: 354 VMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 413

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           +AE   +   + R ++  +I  + V +N ++  YG+     +   ++  M+ +G  P+ I
Sbjct: 414 QAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKI 473

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGV-------EIDPVLYQTM 340
           TY T+I  +   G + +     Q L ++GV       ++  ++Y+T+
Sbjct: 474 TYRTMIKAYSSKG-MTKHVKELQDLEAAGVRKVNNPCQVIEIIYKTL 519



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 6/259 (2%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-K 258
           +I + G+    + A  LF +M   G D S  SY  LL  YG + L  +A  L   M+R  
Sbjct: 161 LIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMKRNP 220

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR- 317
           + + +V TY+ +IK   +    +KA  L+  M++ GI PN ITY+T+I  +GKA   +  
Sbjct: 221 DCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMFEEM 280

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL-- 375
            A L + L     E D     + + A+   G +   ++   + +     P      +L  
Sbjct: 281 EATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLD 340

Query: 376 --ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +AG  ++ + V            I  +  +I+ F R      +  +F  MRS    P
Sbjct: 341 SYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 400

Query: 434 DSHIIALVLNSYGKLREFE 452
               +  ++ +YG+  + E
Sbjct: 401 SCVTLCSLVRAYGQAEKPE 419



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 6/239 (2%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL- 325
           Y  +I + GK  + EKA  L Q M + G + +  +Y+ +++ +G++G LD+A  L +++ 
Sbjct: 158 YIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMK 217

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRI 381
           R+   + D   Y  +I +  +V     AK LL  +      PNTI   T I    +A   
Sbjct: 218 RNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMF 277

Query: 382 EEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           EE      +       + D+      +  F  + +   + + +EK + AG  P      +
Sbjct: 278 EEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNV 337

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           +L+SYGK  +++    +   MQ+    ++   +  ++  +G   D   +E LF  + S+
Sbjct: 338 LLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSE 396



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 5/94 (5%)

Query: 415 KYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
           ++ + ++VFE +R   ++ P S +   ++   GK ++ E A +L+  M  EGC  S + +
Sbjct: 134 RWESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESY 193

Query: 474 FQMLSLYGAR----KDFNMLESLFERLDSDSNIN 503
             +LS YG      K F++LE +    D   +++
Sbjct: 194 TALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVH 227


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 210/467 (44%), Gaps = 41/467 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF+YN V+R     K+ E A  L +EM+  G +    T+  LI  F K G  D A+ +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M+   +  DLV+Y++LI       +  +  ++F  +   G  P  + YNT+I  F K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  + E M E+GV+P+  +Y+ L++      K  EAL     M E +   +  T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRK-------------MG------------------- 224
            NI+I+   +  +  DA  +   M+K             +G                   
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414

Query: 225 -----IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
                 DP V+SYN L+    +     +A+ ++ L+  K    + VT N ++    K+ +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             KA  L +++ +  I  N+ TY+ +I  + K G L+ A  L  K+R S ++     Y  
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAG 395
           ++ +  + G +  A RL  E+++ N  P   +  I+     +AG I+ A  +      AG
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
              D+  +  +I  F +       I  F+KM  +G+ PD+HI   VL
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 211/459 (45%), Gaps = 7/459 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L   ++ ++   A G+   M +RG A + Y ++ L+    +      A+S L++M ++ 
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  D+  Y+ +I    +  +  KA+ + + +K SG    LV +  +I+ F KA    EA 
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
             ++EM+  G++ D V Y++L+  + +  +     ++F E+ E        T N +I  +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +L   K+A  +F  M + G+ P+V +Y  L+          EA+    LM  K+ E N 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNA 352

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA-MLFQ 323
           VTYN +I    K      A  +++ M+ R   P+ ITY+ ++      G LD A+ +L+ 
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 324 KLR-SSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
            L+ SS  + D + Y  +I    +   +  A      L+ +L   + +     +    +A
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G + +A  +++Q  D+  V++   +  MI+ F +         +  KMR +   P     
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
             +L+S  K    + A  L+ EMQ +   F D V F ++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIM 570



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 38/378 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R  A+ D + E    SP    YN ++R   +  Q + A  +F+ M +RG+ P+ YTY+ L
Sbjct: 265 RGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I      G    A+  L  M +     + V Y+ +I    K    + A+ I   +K    
Sbjct: 324 IDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 121 VPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEA 178
            PD + YN ++  +  K  L + ++LL   +++     PD +SY+ L++   + ++  +A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 179 LSVFAEMNEVNCPLDLTTCNI-----------------------------------MIDV 203
           L ++  + E     D  T NI                                   MID 
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           + +  M   A  L   MR   + PSV  YN LL    +     +A  LF  MQR     +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           VV++N MI    K+ + + A +L+  M   G+ P+  TYS +I  + K G LD A   F 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 324 KLRSSGVEIDPVLYQTMI 341
           K+  SG E D  +  +++
Sbjct: 624 KMVDSGFEPDAHICDSVL 641



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/430 (20%), Positives = 182/430 (42%), Gaps = 6/430 (1%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S+ ++M +     + V  S L+E   ++     A  + + +   G   ++  +N ++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              +     +A  L+ EMR   + PD  SY+T++  + E  +  +AL +  EM    C  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L T  I+ID + +     +A      M+ MG++  +V Y +L+R + +         LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             +  +      +TYNT+I+ + K  + ++A+ + + M  RG+ PN  TY+ +I      
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
           GK   A      +     E + V Y  +I    + GLVA A  ++  +++  T P     
Sbjct: 331 GKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390

Query: 373 TI----LARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKM 426
            I    L   G ++EA+ +           D  V  +  +I    +  +    +++++ +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
                  D     ++LNS  K  +   A +L+ ++ +   V +   +  M+  +      
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510

Query: 487 NMLESLFERL 496
           N+ + L  ++
Sbjct: 511 NVAKGLLCKM 520



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 119/287 (41%), Gaps = 35/287 (12%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           + + +   P V +YN ++  + +  +   A  ++D + ++  A DR T + L+    K G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             + A+   +Q+   ++  +   Y+ +I+   K    + A  +  +++ S + P +  YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            +++   K     +A  L EEM+     PD VS+                          
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF-------------------------- 567

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
                    NIMID   +    K A+ L   M + G+ P + +Y+ L+  + +     EA
Sbjct: 568 ---------NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           I  F  M     E +    ++++K      E +K T L++++ ++ I
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 219/477 (45%), Gaps = 10/477 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           +V A   ++  ++   +   A  +F+ + + G  P   TY+TL+    ++  F S  + L
Sbjct: 21  TVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALL 80

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            ++  + +  D +L + +I    +     +A+ IF ++K  G  P    YNT+I  FG A
Sbjct: 81  SKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIA 140

Query: 138 KLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               E+  L+E M +++ VKP+  +Y+ L+  +    K  EA +V  +M       D+ T
Sbjct: 141 GRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVT 200

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M   Y Q    + A+RL   M    + P+  +   ++  Y +     EA+     M+
Sbjct: 201 YNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMK 260

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N V +N++IK Y  + +       +  M+  GI+P+ +T+STI+  W  AG ++
Sbjct: 261 ELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLME 320

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
               +F  +  +G+E D   Y  +   Y R G    A+ LL  +     QPN +   T I
Sbjct: 321 NCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTII 380

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           +    AG+++ A  +  +  + G   ++  +  +I  +   K+     E+   M   G  
Sbjct: 381 SGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVV 440

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV----FSDQVHFQML-SLYGARK 484
           P+   + LV +++  +  F+ A+ + +  +EE  +     SD++  Q L S+Y  +K
Sbjct: 441 PEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDSDKIQVQSLESIYKKQK 497



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 4/376 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P     N ++     + + + A  +F +M++ G  P   TY+TLI  FG  G    ++  
Sbjct: 90  PDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKL 149

Query: 77  LQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           L+ M QD  V  +   Y+ LI+         +A ++  ++ +SGI PD+V YNTM   + 
Sbjct: 150 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 209

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +    + A  LI +M    VKP+  +   +++ Y +     EAL     M E+    +  
Sbjct: 210 QNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPV 269

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I  Y         D     M + GI P VV+++T++  +  A L      +F  M
Sbjct: 270 VFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDM 329

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  IE ++  Y+ + K Y ++ +  KA  L+  M   G++PN + ++TII+ W  AGK+
Sbjct: 330 VKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKM 389

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           DRA  L +K+   G   +   Y+T+I  Y        A+ LL  + +   +P  + + ++
Sbjct: 390 DRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLV 449

Query: 376 ARAGRIEEATWVFRQA 391
           A A R   A  +F++A
Sbjct: 450 ADAWR---AIGLFKEA 462



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 198/428 (46%), Gaps = 5/428 (1%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A ++F+ L   G  P L+ Y T++    + K FK    L+ ++ + G+KPD++  + ++
Sbjct: 40  EAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMI 99

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM-RKMGI 225
           N + E+ K  EA+ +F +M E  C    +T N +I  +G      ++ +L   M +   +
Sbjct: 100 NAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENV 159

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P+  +YN L++ +   +   EA ++   M    I+ +VVTYNTM + Y ++ E E+A  
Sbjct: 160 KPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAER 219

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY- 344
           L+ +M    ++PN  T   II+ + K G +  A     +++  GV+ +PV++ ++I  Y 
Sbjct: 220 LILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYL 279

Query: 345 --ERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
                  V  A  L+ E   +P+ +   T +   + AG +E    +F     AG   DI 
Sbjct: 280 DTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIH 339

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  + + + R  +      +   M   G  P+  I   +++ +    + + A  L  +M
Sbjct: 340 AYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKM 399

Query: 462 QEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRL 521
            E G   + + +  ++  YG  K     E L   ++    + +     +VA  +      
Sbjct: 400 HEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLF 459

Query: 522 NDASRIMN 529
            +A+RI+N
Sbjct: 460 KEANRILN 467



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 159/365 (43%), Gaps = 11/365 (3%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ +L+ + ++    P+   YN++++     K+ E A  +  +M   GI PD  TY+T+ 
Sbjct: 146 SMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMA 205

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
             + + G  + A   + +M  + V  +      +I    K  +  +A+    R+K  G+ 
Sbjct: 206 RAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVD 265

Query: 122 PDLVAYNTMINVF---GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           P+ V +N++I  +          EA  L+EE    G+KPD V++ST++N +         
Sbjct: 266 PNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMENC 322

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
             +F +M +     D+   +I+   Y +    + A+ L  SM K G+ P+VV + T++  
Sbjct: 323 EEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISG 382

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +  A     A  L   M       N+ TY T+I  YG++ +  KA  L+  M+ RG+ P 
Sbjct: 383 WCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPE 442

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSG-----VEIDPVLYQTMIVAYERVGLVAHA 353
             T   +   W   G    A  +              + D +  Q++   Y++  L A  
Sbjct: 443 MSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDSDKIQVQSLESIYKKQKLSASP 502

Query: 354 KRLLH 358
             LL 
Sbjct: 503 SNLLQ 507



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/166 (18%), Positives = 80/166 (48%), Gaps = 3/166 (1%)

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
           R   +  L   G+  EA  VF    + G    +  +  ++   +R K++ ++  +  K+ 
Sbjct: 25  RTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVA 84

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG-ARKDF 486
             G  PDS ++  ++N++ +  + + A  ++ +M+E GC  +   +  ++  +G A + +
Sbjct: 85  DNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPY 144

Query: 487 NMLESLFERLDSDSNINKKE-LHHVVAGIYERANRLNDASRIMNRM 531
             ++ L E +  D N+   +  ++++   +    +L +A  ++++M
Sbjct: 145 ESMK-LLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKM 189


>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 183/357 (51%), Gaps = 2/357 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ + + + E+  Y P    Y  ++  + + KQ E A+ LF EM + G      +Y+ L+
Sbjct: 138 ALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALL 197

Query: 62  TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           + + + G+ D A S L +M+       D+  YS LI+   ++  ++KA ++ S + + GI
Sbjct: 198 SAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGI 257

Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
            P+ + YNT I+ +GKAK+F E   +L++ + + G KPD  + ++ L  +  + +     
Sbjct: 258 KPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETME 317

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
             + +  E      + T NI++D YG+ +  +    +   M+K     ++V+YN ++  +
Sbjct: 318 KCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 377

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G A    +  HLFRLM+ + I+ + VT  ++++ YG++ + EK  +++  ++N  I  + 
Sbjct: 378 GRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDT 437

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           + Y+ ++  +G+         +   +   G + D   Y+TM  AY   G+  HAK +
Sbjct: 438 VFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEI 494



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 118/294 (40%), Gaps = 36/294 (12%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           + +IL+ +       P V  Y++++++ L+   +  A  L  +M  RGI P+  TY+T I
Sbjct: 209 AFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFI 268

Query: 62  TCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             +GK  MF    S L  M   D    D+   ++ +    +          + + + +GI
Sbjct: 269 DAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGI 328

Query: 121 VPDL-----------------------------------VAYNTMINVFGKAKLFKEARL 145
            P +                                   V YN +I+ FG+A   K+   
Sbjct: 329 QPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEH 388

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L   MR + +KP  V+  +L+  Y +  K  +  SV   +   +  LD    N ++D YG
Sbjct: 389 LFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYG 448

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +L+   +  ++   M + G  P   +Y T+ R Y +  +   A  +  L+   E
Sbjct: 449 RLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 502



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 8/335 (2%)

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR-K 258
           +I + G+    + A  LF  M + G + S  SY  LL  Y  + L  EA  +   M+   
Sbjct: 161 LIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSP 220

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL-DR 317
           + + +V TY+ +IK   +     KA  L+ +M  RGI+PN ITY+T I  +GKA    + 
Sbjct: 221 DCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 280

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL-- 375
            ++L   L   G + D     + + A+ R G +   ++   + ++    P      IL  
Sbjct: 281 ESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLD 340

Query: 376 --ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +A   E+ + V            I  +  +I+ F R      +  +F  MRS    P
Sbjct: 341 SYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKP 400

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESL 492
               +  ++ +YG+  + E  D + + + E   +  D V +  L   YG  + F  ++ +
Sbjct: 401 SCVTLCSLVRAYGQAGKREKIDSVLN-LVENSDIMLDTVFYNCLVDAYGRLECFAEMKKV 459

Query: 493 FERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
              ++       K  +  +A  Y      N A  I
Sbjct: 460 LGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEI 494



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 6/239 (2%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y  +I + GK  + EKA  L QEM   G E +  +Y+ +++ + ++G LD A  +  +++
Sbjct: 158 YIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMK 217

Query: 327 SSG-VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           +S   + D   Y  +I +  +V     A+ LL ++     +PNTI   T I    +A   
Sbjct: 218 NSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMF 277

Query: 382 EEATWVFRQAF-DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
            E   +      D G   D+      +  F R+ +   + + +EK + AG  P      +
Sbjct: 278 AEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNI 337

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSD 499
           +L+SYGK   +E    +   MQ+    ++   +  ++  +G   +   +E LF  + S+
Sbjct: 338 LLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSE 396



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/314 (18%), Positives = 138/314 (43%), Gaps = 6/314 (1%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P    Y  L+ + G+ +   +A  LF+ M  +  E +  +Y  ++  Y +S   ++A ++
Sbjct: 153 PYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSI 212

Query: 287 MQEMQNRG-IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           + EM+N    +P+  TYS +I    +    ++A  L   + + G++ + + Y T I AY 
Sbjct: 213 LNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYG 272

Query: 346 RVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
           +  + A  + +L ++      +P+     + +    R+G++E     + +  +AG    I
Sbjct: 273 KAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSI 332

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             F  +++ + + + Y  +  V E M+   Y        +V++++G+    +  + L+  
Sbjct: 333 QTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRL 392

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
           M+ E    S      ++  YG       ++S+   +++   +     ++ +   Y R   
Sbjct: 393 MRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLEC 452

Query: 521 LNDASRIMNRMNKR 534
             +  +++  M +R
Sbjct: 453 FAEMKKVLGMMEQR 466


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 209/462 (45%), Gaps = 11/462 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGM 69
           + R  P++  YN +L + L+  + + A  L  EM  +G   + +  T++ +I+   +EG 
Sbjct: 230 QLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGH 289

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
            ++A+  +  M   + +     Y+ LI    +     KA ++   +++ GI+P +V YN 
Sbjct: 290 LENAVKLVDSMRLSKKASSFT-YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNA 348

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+   K +  + A++   EMR  G+ PD ++Y++LLN Y +     EAL +  ++    
Sbjct: 349 IIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAG 408

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
               + T N +ID Y +L    +A RL   M + G  P V +Y  L+    +      A 
Sbjct: 409 LAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAR 468

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
             F  M  K ++ +   YNT I           A  L + M  +GI P+ +TY+ II   
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGL 528

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K G L  A  L  K+ S G++ D + Y  +I A+   GL+  A++LL+ +     QP+ 
Sbjct: 529 CKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSV 588

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     +    R G +  A   FR+  D G   +   +  +I       +       F +
Sbjct: 589 VTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHE 648

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADD--LYSEMQEEG 465
           M   G  P+ +   L+++  G  RE   AD   LY EM + G
Sbjct: 649 MLERGLAPNKYTYTLLID--GNCREGNWADAIRLYFEMHQNG 688



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 193/419 (46%), Gaps = 9/419 (2%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +NVV+  + R    E A  L D MR    A   +TY+ LIT   + G    A +   +ME
Sbjct: 277 FNVVISFLAREGHLENAVKLVDSMRLSKKA-SSFTYNPLITALLERGFVRKAEALQMEME 335

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
            + +   +V Y+ +I    K      A   F+ +++ G++PD++ YN+++N + KA   K
Sbjct: 336 NEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLK 395

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  L+ ++R  G+ P  ++Y+TL++ Y       EA  +  EM E  C  D+ T  I++
Sbjct: 396 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILM 455

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE--AIHLFRLMQRKE 259
           +   ++     A   F  M   G+ P   +YNT  R+  E  L     A  L  +M  K 
Sbjct: 456 NGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT--RICAELTLSSTPMAFQLREVMMLKG 513

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           I  + VTYN +I    K+   + A  L  +M + G++P+ ITY+ +I    + G L  A 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITIL 375
            L   + S G++   V Y  ++    R G +  A    +++L    +PN I     I  L
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              GR   A   F +  + G   +   +  +I+   R   +A+ I ++ +M   G  PD
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 692



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 163/353 (46%), Gaps = 1/353 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  YN ++  +L+ +Q E A   F EMR  G+ PD  TY++L+  + K G    A+  
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  + +  ++  ++ Y+ LI+   +L D ++A  +   +   G  PD+  Y  ++N   K
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +    AR   +EM  +G++PD  +Y+T +   +       A  +   M       D  T
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++ID   +    KDA RL   M   G+ P  ++Y  L+  + E  L  EA  L   M 
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ +VVTY  ++    +      A    ++M + GIEPN ITY+ +I      G+  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
            A   F ++   G+  +   Y  +I    R G  A A RL  E+ Q N IP +
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ-NGIPPD 692



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 190/460 (41%), Gaps = 50/460 (10%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V   N VLR +  A +W+    ++ EM Q  + P   TY+TL+  F KEG  D A  
Sbjct: 199 APDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASM 258

Query: 76  WLQQMEQDRVSGDL--VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            L++ME       L  V ++ +I    +      A+ +   ++ S        YN +I  
Sbjct: 259 LLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFT-YNPLITA 317

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +    ++A  L  EM  +G+ P  V+Y+ +++                          
Sbjct: 318 LLERGFVRKAEALQMEMENEGIMPTVVTYNAIIH-------------------------G 352

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L  C          + A+ A   F  MR MG+ P V++YN+LL  Y +A    EA+ L  
Sbjct: 353 LLKC----------EQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            ++R  +   V+TYNT+I  Y +  +  +A  L +EM  +G  P+  TY+ ++    K  
Sbjct: 403 DLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR 462

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ--------PNT 365
            L  A   F ++ S G++ D   Y T I A     L   +  +  +LR+        P+T
Sbjct: 463 NLAMAREFFDEMLSKGLQPDCFAYNTRICAE----LTLSSTPMAFQLREVMMLKGIYPDT 518

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +     I  L + G +++A  +  +    G   D   + C+I             ++   
Sbjct: 519 VTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNG 578

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           M S G  P      +++++  +     +A   + +M + G
Sbjct: 579 MVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVG 618



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 165/369 (44%), Gaps = 17/369 (4%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
            ++ F  +   G+ PD+   N ++ V   A  + + R +  EM +  V+P  V+Y+TLL+
Sbjct: 186 CLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDL--TTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
            +++  +  EA  +  EM        L   T N++I    +    ++A +L  SMR +  
Sbjct: 246 SFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSK 304

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
             S  +YN L+    E     +A  L   M+ + I   VVTYN +I    K  + E A  
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
              EM+  G+ P+ ITY++++  + KAG L  A  L   LR +G+    + Y T+I  Y 
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R+G +A A+RL  E+ +    P     TIL    R      + R+ FD    K     G 
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSK-----GL 479

Query: 406 MIELFSRNKKYAN---------VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             + F+ N +              ++ E M   G +PD+    ++++   K    + A  
Sbjct: 480 QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKR 539

Query: 457 LYSEMQEEG 465
           L ++M  +G
Sbjct: 540 LKTKMVSDG 548



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 57/124 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PSV  Y +++    R      A+G F +M   GI P+  TY+ LI      G    A   
Sbjct: 586 PSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRH 645

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  ++ +   Y+ LI+   +  +++ AI ++  +  +GI PD   +N +   F +
Sbjct: 646 FHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDE 705

Query: 137 AKLF 140
             ++
Sbjct: 706 GHMY 709


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 205/447 (45%), Gaps = 4/447 (0%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           N+++       Q  L+  +   + +RG  PD  T +TLI      G    A+ +   +  
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
                D + Y  LI    K+ +   AI +   L+   I PD+V YN +I+   K KL  E
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A  L  EM  + + P+ V+Y+TL+  +      +EA+++  EM   N   D+ T +I+ID
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
             G+    K A  +   M K  + P VV+YN+L+  Y        A ++F  M +  +  
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            V +Y  MI    K+   ++A +L +EM+++ + PN IT++++I    K+G++     L 
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
            K+R      D + Y ++I A  +   +  A    K+++ +  QP+       I  L + 
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR++ A  VF+     G   DI  +  MI  F +   +   + +  KM   G  P++   
Sbjct: 468 GRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
            +++ +  +  E + A+ L  EM   G
Sbjct: 528 DIIICALFEKDENDKAEKLLREMIARG 554



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/507 (22%), Positives = 219/507 (43%), Gaps = 47/507 (9%)

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++   +M   R       ++N++    K+  +  AIS+   L   GI  DLV  N +
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN F        +  ++  + ++G  PD ++ +TL+       +  +AL    ++  +  
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD  +   +I+   ++   K A +L  ++ +  I P VV YN ++    + +L GEA +
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 251 LFRLMQRKEIEQNVVTYNTMI---KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           L+  M  K+I  NVVTY T+I    I G  +E   A  L+ EM+ + I P+  T+S +I 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIE---AVALLNEMKLKNINPDVYTFSILID 287

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL---------- 357
             GK GK+  A ++   +  + V+ D V Y +++  Y  V  V HAK +           
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 358 -----------------------------HELRQPNTIPRETAITILARAGRIEEATWVF 388
                                        H+   PNTI   + I  L ++GRI     + 
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +  D  ++ D+  +  +I+   +N      I +F+KM +    PD +   ++++   K 
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKEL 507
              + A +++  +  +G     + +  M+S +     F+   +L  +++ +  I N    
Sbjct: 468 GRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527

Query: 508 HHVVAGIYERANRLNDASRIMNRMNKR 534
             ++  ++E+    + A +++  M  R
Sbjct: 528 DIIICALFEKDEN-DKAEKLLREMIAR 553



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 35/368 (9%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P V  YN+++ ++ + K    A  L+ EM  + I P+  TY+TLI  F   G  
Sbjct: 201 EERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCL 260

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A++ L +M+   ++ D+  +S LI+   K      A  + + +  + + PD+V YN++
Sbjct: 261 IEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++ +      K A+ +   M + GV P   SY+ +++   +     EA+S+F EM   N 
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN- 379

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                             + P+ +++N+L+    ++        
Sbjct: 380 ----------------------------------VIPNTITFNSLIDGLCKSGRIAYVWD 405

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M+ +    +V+TY+++I    K+   ++A  L ++M  + I+P+  TY+ +I    
Sbjct: 406 LVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC 465

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K G+L  A  +FQ L   G  +D   Y  MI  + + GL   A  LL ++     IP   
Sbjct: 466 KGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAI 525

Query: 371 AITILARA 378
              I+  A
Sbjct: 526 TFDIIICA 533



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 155/314 (49%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  ++           A  L +EM+ + I PD YT+S LI   GKEG   +A   
Sbjct: 242 PNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIV 301

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +  V  D+V Y++L++    +++   A  +F+ +  SG+ P + +Y  MI+   K
Sbjct: 302 LAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCK 361

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K+  EA  L EEM+ + V P+T+++++L++   ++ +      +  +M + +   D+ T
Sbjct: 362 TKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVIT 421

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID   +      A  LF  M    I P + +Y  L+    +      A  +F+ + 
Sbjct: 422 YSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLL 481

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K    ++ TY  MI  + K+   ++A  L+ +M++ G  PNAIT+  II    +  + D
Sbjct: 482 IKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEND 541

Query: 317 RAAMLFQKLRSSGV 330
           +A  L +++ + G+
Sbjct: 542 KAEKLLREMIARGL 555


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 11/421 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F +N ++    R +Q E+AH LF +M  RG + D  +Y+ LI  F + G  D A+
Sbjct: 160 WRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEAL 219

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
              ++M Q  +     L   L +  R      + + +  ++K  G  P   AY  +++++
Sbjct: 220 ELFREMTQPDMYTHAALVKGLCDAGRG----EEGLCMLQKMKELGWRPTTRAYAALVDLW 275

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + +  +EA  ++ EM + G+ P  V+ + ++N Y    +   A+ VF  M    C  ++
Sbjct: 276 CREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNV 335

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++  +        A  L   MR+ G++P VV+YN L+R        G A  L RL
Sbjct: 336 WTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRL 395

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M+   +  +  TYN +I    K+ + ++A +L   ++ RGI PN++T++T+I    KAGK
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
            D A    + + S+G   D   Y   I    +          + E+ Q    P+T+    
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS---RNKKYANVIEVFEKMR 427
            I  L        AT ++ Q    G   D+  +   +  +    R  +  NV+   +K R
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 428 S 428
           +
Sbjct: 576 T 576



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 131/286 (45%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ YN +++    A +   A  L D+MR+ G+ PD  TY+ LI     +G   SA   
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ ME + ++ D   Y+ LI+   K     +A S+F  L+  GI P+ V +NT+IN   K
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A  F  A   +E M   G  PDT +YS  +    +     E L    EM + +       
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVN 512

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             I+I+          A R++  M   G  P VV+Y T +R Y       EA ++   M+
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
           +     + + YNT+I  +    + ++A  +++ M      PN  T+
Sbjct: 573 KCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 158/407 (38%), Gaps = 51/407 (12%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + YNV++  + +  + + A  LFD +  RGI P+  T++T+I    K G FD A ++L+ 
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLEN 465

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M     + D   YS  IE   K     + +     +    + P  V Y  +IN     + 
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           +  A  +  +M  QG  PD V+Y+T +  Y    +  EA +V  EM +    +D    N 
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNT 585

Query: 200 MIDVY---GQLDMA---------------------------------------------- 210
           +ID +   GQ D A                                              
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTI 645

Query: 211 --KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
              D   LF  M+K  +  S  +Y ++L  + E     E   L  LM+ + +  N   YN
Sbjct: 646 ELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYN 705

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            ++  + K   +  A  L+  M   G  PN I Y  +++     G+ DRA  +F+  R  
Sbjct: 706 ALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWK 765

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
               D ++++ +I  + R G       ++  L Q    P +    +L
Sbjct: 766 EYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAML 812



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/470 (20%), Positives = 196/470 (41%), Gaps = 15/470 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + P+  AY  ++    R ++ E A  + +EM   G+ P   T + ++  + +EG  
Sbjct: 257 KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRM 316

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+   + M       ++  Y+ +++         KA+++  +++  G+ PD+V YN +
Sbjct: 317 SGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLL 376

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I           A  L+  M   G+  D  +Y+ L++   +  K  EA S+F  +     
Sbjct: 377 IRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +I+   +      A     +M   G  P   +Y+  +    + +   E + 
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF 496

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M +K+++ + V Y  +I        +  AT +  +M ++G  P+ +TY+T +  + 
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYC 556

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             G+LD A  +  +++     +D + Y T+I  +  +G    A  +L  +    ++P   
Sbjct: 557 NEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHF 616

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
              IL R               +   +K  SV+   IEL       A+V E+FE M+   
Sbjct: 617 TFFILLRHLLQRRLA-------EHVPLKATSVWK-TIEL-------ADVFELFELMKKNS 661

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
               +     +L  + + R  +    L S M+EE    ++ ++  +++ +
Sbjct: 662 VPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCF 711



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 1/237 (0%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV-VTYNTMIKIYGKSLEHEKATNLMQE 289
            + +LL  +    L    + LF  M R         TYN +I+   +  +   A   +  
Sbjct: 95  PFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   G  P+A T++++I  + +  +L+ A  LF K+   G   D V Y  +I  +   G 
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214

Query: 350 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
           +  A  L  E+ QP+       +  L  AGR EE   + ++  + G       +  +++L
Sbjct: 215 IDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           + R +K     ++  +M  +G  P      +V+N+Y +      A  ++  M+ +GC
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 256/577 (44%), Gaps = 56/577 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            +LD + +EA   P+V  Y   +    R K  E A  L++ M + G+  D  T S L+  
Sbjct: 225 GVLDMM-KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             ++G F  A +  ++M++   + + V Y  LI+   K     + +S+   + S G+V D
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           LV Y  +++  GK     E +  +       + P+ V+Y+ L++   + H   EA  V  
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 184 EMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL----- 235
           EM E +   ++ T + +I+ +   G LD A +  R+   M++ GI+P+VV+Y TL     
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM---MKERGINPNVVTYGTLIDGFF 460

Query: 236 --------LRVYGEAELFG----------------------EAIHLFRLMQRKEIEQNVV 265
                   L VY +    G                      EA+ LF+      +  + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            Y T+I    K+ +   A    QE+ +R + P+A+ Y+  I      GK   A     ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R+ G++ D   Y TMIV++ R G  A A +LLHE++    +PN I   T +  L   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI---I 438
           E+A ++  +   AG          +++  S++++   ++++ E M +AG   D  +   +
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERL 496
             VL  +G  R+   A  +  EM   G +  D + F  L L   +     N   +  + L
Sbjct: 701 LQVLCYHGMTRK---ATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + + N    + ++ G+ E   R+ +A  ++  M K
Sbjct: 757 HQNISPNIATFNTLLGGL-ESVGRIGEAGTVLIEMEK 792



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 203/459 (44%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P+V  Y  ++    + +  + A  ++ +M   G+  +++   +L+    + G  
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++  +      +S D V Y+ LI+   K  D   A      L    ++PD V YN  
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN       FKEA+  + EMR  G+KPD  +Y+T++  +    +  +AL +  EM   + 
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L T N ++         + A  L   M   G  PS +++  +L+   ++      + 
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M    +  ++  YNT++++        KAT +++EM   GI P+ IT++ +I    
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K+  LD A   + ++    +  +   + T++   E VG +  A  +L E+     +PN +
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +   T   +     EA  ++ +    G V  +S +  +I  F++        E+F+ M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +  G  P S    ++++ + ++R          +M+E+G
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 208/463 (44%), Gaps = 4/463 (0%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  YN ++    RA Q + A G+ D M++ G+ P+  TY+  I  + +    + A    +
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M ++ V  D+V  S L+    +   +S+A ++F  +   G  P+ V Y T+I+   KA 
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             KE   L+ EM  +GV  D V+Y+ L++   +  K  E           N   +  T  
Sbjct: 324 RGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYT 383

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
           ++ID   +     +A+++   M +  I P+VV++++++  + +  L  +A    R+M+ +
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  NVVTY T+I  + K    + A  +  +M   G++ N     +++    + GK++ A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITI 374
             LF+    SG+ +D V Y T+I    + G +  A +   EL   N +P        I  
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L   G+ +EA     +  + G   D S +  MI    R  + A  +++  +M+ +   P+
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
                 ++         E A  L +EM   G   S   H ++L
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/484 (21%), Positives = 216/484 (44%), Gaps = 19/484 (3%)

Query: 3   VAILDWINEEAR---------------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ 47
            A++DW+ ++ +                SP+   Y V++  + +A   + A  +  EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           + I+P+  T+S++I  F K G+ D A  + + M++  ++ ++V Y  LI+   K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ ++  +   G+  +    ++++N   +    +EA  L ++    G+  D V+Y+TL++
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +      A     E+ + N   D    N+ I+    L   K+A      MR MG+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              +YNT++  +       +A+ L   M+   I+ N++TYNT++     +   EKA  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM + G  P+++T+  ++    ++ +LD    + + + ++G+  D  +Y T++      
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G+   A  +L E+      P+TI     I    ++  ++ A   + Q        +I+ F
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++       +      V  +M  +G  P++    ++   +GK      A  LY EM  
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVG 827

Query: 464 EGCV 467
           +G V
Sbjct: 828 KGFV 831



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 165/379 (43%), Gaps = 35/379 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YNV +  +    +++ A     EMR  G+ PD+ TY+T+I    ++G    A+  
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------------- 122
           L +M+   +  +L+ Y+ L+          KA  + + + S+G  P              
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 123 ---------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                D+  YNT++ V     + ++A +++EEM   G+ PDT++
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++ L+  + ++     A + +A+M   N   ++ T N ++     +    +A  +   M 
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G++P+ ++Y+ L   +G+     EA+ L+  M  K     V TYN +I  + K+    
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L ++MQ RG+ P + TY  +++ W +           + ++  G          + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 342 VAYERVGLVAHAKRLLHEL 360
            A+ + G+   A+RLL  L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/568 (22%), Positives = 237/568 (41%), Gaps = 71/568 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEGMF---- 70
           P+  AYN++L     A   + AH   +  EM +RG+  D  T +TL+    + G      
Sbjct: 101 PTTVAYNILL-----AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 71  ------DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
                      W+        +G L    +L+++A    D   A+S+  R+ + G+  D+
Sbjct: 156 ALADRAGGITPWMSS------AGTL----SLLDIA-GFGDTPAALSVADRMTAQGLPMDV 204

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE------------- 171
           V YNT++  F +A     AR +++ M+E GV P+  +Y+  +  Y               
Sbjct: 205 VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG 264

Query: 172 ----------------------NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
                                 + +F EA ++F EM++V    +  T   +ID   +   
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            K+   L   M   G+   +V+Y  L+   G+     E     R      +  N VTY  
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           +I    K+   ++A  ++ EM+ + I PN +T+S++I  + K G LD+A    + ++  G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
           +  + V Y T+I  + +      A  + H++     + N    ++ +  L + G+IEEA 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F+ A  +G   D   +  +I+   +        +  +++      PD+ +  + +N  
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 446 GKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNIN 503
             L +F+ A    +EM+  G +  DQ  +  + +   RK      L+ L E   S    N
Sbjct: 565 CMLGKFKEAKSFLTEMRNMG-LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRM 531
               + +VAG++     +  A  ++N M
Sbjct: 624 LITYNTLVAGLFG-TGAVEKAKYLLNEM 650



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 130/284 (45%), Gaps = 2/284 (0%)

Query: 9   INE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           +NE   A +SPS   +  VL+   ++++ ++   + + M   G+  D   Y+TL+     
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            GM   A   L++M    ++ D + ++ LI    K S    A + ++++    I P++  
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           +NT++          EA  ++ EM + G++P+ ++Y  L   + +    VEA+ ++ EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                  ++T N +I  + +  M   A  LF  M+K G+ P+  +Y+ L+  +       
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           E     + M+ K    +  T + + + + K     +A  L++ +
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 113/253 (44%), Gaps = 1/253 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I +W+     ++  +  YN +L+ +        A  + +EM   GIAPD  T++ LI   
Sbjct: 681 IHEWMMNAGLHA-DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K    D+A +   QM    +S ++  ++ L+     +    +A ++   ++ SG+ P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + Y+ +    GK     EA  L  EM  +G  P   +Y+ L++ + +     +A  +F +
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +        T +I++  + ++    +  +    M++ G  PS  + + + R + +  +
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 245 FGEAIHLFRLMQR 257
             +A  L + + R
Sbjct: 920 TWQAQRLLKNLYR 932



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 96/208 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +N ++    ++   + A   + +M  + I+P+  T++TL+      G    A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME+  +  + + Y  L     K S+  +A+ ++  +   G VP +  YN +I+ F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA +  +A+ L ++M+++GV P + +Y  L++ +       E      +M E        
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           T + +   + +  M   A RL  ++ ++
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 256/577 (44%), Gaps = 56/577 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
            +LD + +EA   P+V  Y   +    R K  E A  L++ M + G+  D  T S L+  
Sbjct: 225 GVLDMM-KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAG 283

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             ++G F  A +  ++M++   + + V Y  LI+   K     + +S+   + S G+V D
Sbjct: 284 LCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           LV Y  +++  GK     E +  +       + P+ V+Y+ L++   + H   EA  V  
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403

Query: 184 EMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTL----- 235
           EM E +   ++ T + +I+ +   G LD A +  R+   M++ GI+P+VV+Y TL     
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM---MKERGINPNVVTYGTLIDGFF 460

Query: 236 --------LRVYGEAELFG----------------------EAIHLFRLMQRKEIEQNVV 265
                   L VY +    G                      EA+ LF+      +  + V
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            Y T+I    K+ +   A    QE+ +R + P+A+ Y+  I      GK   A     ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
           R+ G++ D   Y TMIV++ R G  A A +LLHE++    +PN I   T +  L   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI---I 438
           E+A ++  +   AG          +++  S++++   ++++ E M +AG   D  +   +
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF--NMLESLFERL 496
             VL  +G  R+   A  +  EM   G +  D + F  L L   +     N   +  + L
Sbjct: 701 LQVLCYHGMTRK---ATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQML 756

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
             + + N    + ++ G+ E   R+ +A  ++  M K
Sbjct: 757 HQNISPNIATFNTLLGGL-ESVGRIGEAGTVLIEMEK 792



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 203/459 (44%), Gaps = 4/459 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E   +P+V  Y  ++    + +  + A  ++ +M   G+  +++   +L+    + G  
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++  +      +S D V Y+ LI+   K  D   A      L    ++PD V YN  
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN       FKEA+  + EMR  G+KPD  +Y+T++  +    +  +AL +  EM   + 
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L T N ++         + A  L   M   G  PS +++  +L+   ++      + 
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M    +  ++  YNT++++        KAT +++EM   GI P+ IT++ +I    
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTI 366
           K+  LD A   + ++    +  +   + T++   E VG +  A  +L E+     +PN +
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
             +   T   +     EA  ++ +    G V  +S +  +I  F++        E+F+ M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +  G  P S    ++++ + ++R          +M+E+G
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/484 (21%), Positives = 216/484 (44%), Gaps = 19/484 (3%)

Query: 3   VAILDWINEEAR---------------YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ 47
            A++DW+ ++ +                SP+   Y V++  + +A   + A  +  EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 48  RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
           + I+P+  T+S++I  F K G+ D A  + + M++  ++ ++V Y  LI+   K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A+ ++  +   G+  +    ++++N   +    +EA  L ++    G+  D V+Y+TL++
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
              +      A     E+ + N   D    N+ I+    L   K+A      MR MG+ P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
              +YNT++  +       +A+ L   M+   I+ N++TYNT++     +   EKA  L+
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            EM + G  P+++T+  ++    ++ +LD    + + + ++G+  D  +Y T++      
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 348 GLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G+   A  +L E+      P+TI     I    ++  ++ A   + Q        +I+ F
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             ++       +      V  +M  +G  P++    ++   +GK      A  LY EM  
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVG 827

Query: 464 EGCV 467
           +G V
Sbjct: 828 KGFV 831



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 242/562 (43%), Gaps = 59/562 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG--LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           P+  AYN++L     A   + AH   +  EM +RG+  D  T +TL+    + G  D+A 
Sbjct: 101 PTTVAYNILL-----AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 75  SWLQQMEQDRVSG----DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +       DR  G    D++ ++ LI    ++ D   A+S+  R+ + G+  D+V YNT+
Sbjct: 156 AL-----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTL 210

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE------------------- 171
           +  F +A     AR +++ M+E GV P+  +Y+  +  Y                     
Sbjct: 211 VAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270

Query: 172 ----------------NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
                           + +F EA ++F EM++V    +  T   +ID   +    K+   
Sbjct: 271 LLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLS 330

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           L   M   G+   +V+Y  L+   G+     E     R      +  N VTY  +I    
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALC 390

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           K+   ++A  ++ EM+ + I PN +T+S++I  + K G LD+A    + ++  G+  + V
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV 450

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y T+I  + +      A  + H++     + N    ++ +  L + G+IEEA  +F+ A
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
             +G   D   +  +I+   +        +  +++      PD+ +  + +N    L +F
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKF 570

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHH 509
           + A    +EM+  G +  DQ  +  + +   RK      L+ L E   S    N    + 
Sbjct: 571 KEAKSFLTEMRNMG-LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           +VAG++     +  A  ++N M
Sbjct: 630 LVAGLFG-TGAVEKAKYLLNEM 650



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 208/501 (41%), Gaps = 45/501 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V  +N ++    R      A  + D M  +G+  D   Y+TL+  F + G  D+A   L 
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            M++  V  ++  Y+  I    +     +A  ++  +  +G++ D+V  + ++    +  
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
            F EA  L  EM + G  P+ V+Y TL++   +  +  E LS+  EM      +DL T  
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348

Query: 199 IMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            ++D     G+ D  KD  R   S     + P+ V+Y  L+    +A    EA  +   M
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDN---LSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK---- 311
           + K I  NVVT++++I  + K    +KAT   + M+ RGI PN +TY T+I  + K    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 312 -------------------------------AGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
                                           GK++ A  LF+    SG+ +D V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
           I    + G +  A +   EL   N +P        I  L   G+ +EA     +  + G 
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             D S +  MI    R  + A  +++  +M+ +   P+      ++         E A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 457 LYSEMQEEGCVFSDQVHFQML 477
           L +EM   G   S   H ++L
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVL 666



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 165/379 (43%), Gaps = 35/379 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YNV +  +    +++ A     EMR  G+ PD+ TY+T+I    ++G    A+  
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP-------------- 122
           L +M+   +  +L+ Y+ L+          KA  + + + S+G  P              
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 123 ---------------------DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                                D+  YNT++ V     + ++A +++EEM   G+ PDT++
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           ++ L+  + ++     A + +A+M   N   ++ T N ++     +    +A  +   M 
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
           K G++P+ ++Y+ L   +G+     EA+ L+  M  K     V TYN +I  + K+    
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  L ++MQ RG+ P + TY  +++ W +           + ++  G          + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 342 VAYERVGLVAHAKRLLHEL 360
            A+ + G+   A+RLL  L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 130/284 (45%), Gaps = 2/284 (0%)

Query: 9   INE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
           +NE   A +SPS   +  VL+   ++++ ++   + + M   G+  D   Y+TL+     
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 67  EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
            GM   A   L++M    ++ D + ++ LI    K S    A + ++++    I P++  
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           +NT++          EA  ++ EM + G++P+ ++Y  L   + +    VEA+ ++ EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
                  ++T N +I  + +  M   A  LF  M+K G+ P+  +Y+ L+  +       
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           E     + M+ K    +  T + + + + K     +A  L++ +
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 113/253 (44%), Gaps = 1/253 (0%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           I +W+     ++  +  YN +L+ +        A  + +EM   GIAPD  T++ LI   
Sbjct: 681 IHEWMMNAGLHA-DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K    D+A +   QM    +S ++  ++ L+     +    +A ++   ++ SG+ P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           + Y+ +    GK     EA  L  EM  +G  P   +Y+ L++ + +     +A  +F +
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M +        T +I++  + ++    +  +    M++ G  PS  + + + R + +  +
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 245 FGEAIHLFRLMQR 257
             +A  L + + R
Sbjct: 920 TWQAQRLLKNLYR 932



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 96/208 (46%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    +N ++    ++   + A   + +M  + I+P+  T++TL+      G    A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L +ME+  +  + + Y  L     K S+  +A+ ++  +   G VP +  YN +I+ F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA +  +A+ L ++M+++GV P + +Y  L++ +       E      +M E        
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           T + +   + +  M   A RL  ++ ++
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 188/424 (44%), Gaps = 5/424 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +YN ++    +  +   A     +M   G+ P+ +TY+T+I  F K GM  +A  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+         D   YS+LI       D ++A+++F      G    ++ YNT++    
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  +A  L+++M E G  PD  +Y+ ++N   +     +A  +  +     C  D+ 
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID Y +      A  +  +M   GI P V++YNTLL    +A      +  F+ M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    N++TYN +I+ + K  +  +A  L +EM+ RG+ P+ +T  T+I      G+L
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 316 DRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           D+A  LF  + +         ++  MI A+     V+ A++L H++   +  P      +
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           +     + G I+ A     +    G V   +  G ++       + +  + +   M   G
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 431 YFPD 434
             P+
Sbjct: 703 IVPE 706



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 229/520 (44%), Gaps = 40/520 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT-------------------- 56
           PSV +YN ++  ++    +  AH ++  M+  GI PD YT                    
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 57  ---------------YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
                          Y  +I+ F KE     A     +M +  +  D++ ++ LI +  K
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  ++  +FS++   G+ P+L  +N  I    +     EA  L+E +  +G+ PD +S
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+  + ++ K VEA     +M       +  T N +I+ + +  M ++AD++     
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P   +Y++L+           A+ +F     K  + +++ YNT++K   K     
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  LM++M   G  P+  TY+ ++    K G L  A  +     + G   D   + T+I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y +   +  A  +L  +      P+ I   T +  L +A +++     F+   + G  
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +I  +  +IE F +++K +  +E+F++M++ G  PD   +  ++       E + A +L
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 458 YSEMQEE-GCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +  +++E    +S  +   M++ +  + + +M E LF ++
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 211/461 (45%), Gaps = 9/461 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +N ++  + +    + +  LF ++ +RG+ P+ +T++  I    ++G  D A  
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ +  + ++ D++ Y+ LI    K S   +A     ++ +SG+ P+   YNT+IN F 
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA + + A  ++ +   +G  PD  +YS+L+N    +     A++VF E  E      + 
Sbjct: 333 KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N ++    +  +   A +L   M + G  P + +YN ++    +     +A  +    
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    ++ T+NT+I  Y K    +KA  ++  M + GI P+ ITY+T++    KA KL
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D     F+ +   G   + + Y  +I ++ +   V+ A  L  E++     P+ +   T 
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTL 572

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVK---DISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           I  L   G +++A  +F       E K     ++F  MI  F      +   ++F KM  
Sbjct: 573 ICGLCSNGELDKAYELFVTI--EKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGG 630

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           +   PD++   ++++SY K    + A     E   +G V S
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 218/464 (46%), Gaps = 9/464 (1%)

Query: 41  LFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL-VLYSNLIEL 98
           +F++++ + G      TY  +I   G  G F++    L +M ++  S  L  +Y  ++  
Sbjct: 26  MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRD 85

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             +     +A+++F R+      P + +YN ++N+  +   F +A  +   M++ G+ PD
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             +++  +  +    +   AL +   M    C  +  +   +I  + + +   +A  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M K GI P ++++N L+ V  +     E+  LF  + ++ +  N+ T+N  I+   +  
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A  L++ + + G+ P+ I+Y+T+I  + K  KL  A     K+ +SGVE +   Y 
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDA 394
           T+I  + + G++ +A ++L +      IP E    + I  L   G +  A  VF +A + 
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    I ++  +++  S+       +++ + M   G  PD     LV+N   K+     A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           + + ++   +GC+  D   F  L + G  K  NM +++ E LD+
Sbjct: 446 NGILNDAIAKGCI-PDIFTFNTL-IDGYCKQRNMDKAI-EILDT 486



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 166/376 (44%), Gaps = 17/376 (4%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F Y+ ++  +        A  +F E  ++G       Y+TL+    K+G+   A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             ++ M +   S D+  Y+ ++    K+   S A  I +   + G +PD+  +NT+I+ +
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   +A  +++ M   G+ PD ++Y+TLLN   +  K    +  F  M E  C  ++
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+I+ + +     +A  LF  M+  G+ P +V+  TL+          +A  LF  
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 255 MQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           ++++ +   +   +N MI  + + L    A  L  +M      P+  TY  +I  + K G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            +D A     +  S G          ++ ++   G V +   + H L +   I     I 
Sbjct: 652 NIDLAHTFLLENISKG----------LVPSFTTCGKVLNCLCVTHRLSEAVVI-----IN 696

Query: 374 ILARAGRI-EEATWVF 388
           ++ + G + EE   +F
Sbjct: 697 LMVQNGIVPEEVNSIF 712



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 7/323 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  S+  YN +++ + +      A  L  +M + G +PD +TY+ ++    K G   
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L          D+  ++ LI+   K  +  KAI I   + S GI PD++ YNT++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   KA+         + M E+G  P+ ++Y+ L+  + ++ K  EA+ +F EM      
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 192 LDLTT-CNIMIDVY--GQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGE 247
            D+ T C ++  +   G+LD A +   LF ++ K      S   +N ++  + E      
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYE---LFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSM 620

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF  M   +   +  TY  MI  Y K+   + A   + E  ++G+ P+  T   ++ 
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLN 680

Query: 308 IWGKAGKLDRAAMLFQKLRSSGV 330
                 +L  A ++   +  +G+
Sbjct: 681 CLCVTHRLSEAVVIINLMVQNGI 703



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 10/172 (5%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I +E ++S S   +N+++          +A  LF +M     APD YTY  +I  + K G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             D A ++L +     +         ++         S+A+ I + +  +GIVP+ V  N
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--N 709

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY--VENHKFVEA 178
           ++       K     ++++E +    +K   ++Y +   LY  + N K VEA
Sbjct: 710 SIFE--ADKKEVAAPKIVVEYL----LKKSHITYYSYELLYDGIRNRKVVEA 755


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 158/326 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP V  Y  V+  +   K++  A GL++EM +R + PD ++   LI    K    D A  
Sbjct: 295 SPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFE 354

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M    +   + +Y+ LI    +     KA  I S ++++G  PD+V YN ++N + 
Sbjct: 355 LASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYC 414

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
              + ++A  LI +M   GV PD  SY+ LL    + H+  +A +  ++  EV    D  
Sbjct: 415 TIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTV 474

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +CNI+ID + +    K A  LF  M   G+    V+Y TL+        +  A  LF  M
Sbjct: 475 SCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM 534

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
              +I+ NV  YN M+    K    ++A  +   M  + + P+ +T++T+I   GK  + 
Sbjct: 535 LNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRA 594

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMI 341
             A  LF+ +R+ GVE D + ++ +I
Sbjct: 595 IEALNLFKDMRTRGVEPDTLTFKYLI 620



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/466 (21%), Positives = 203/466 (43%), Gaps = 4/466 (0%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           YN  +  +++   ++L    +D    +G     +TYS  I+   +    +     L  M+
Sbjct: 196 YNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMD 255

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           +   S D+   +  I    K +    A+ +  ++++ G  PD+V Y T+++     K F 
Sbjct: 256 KLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFA 315

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  L EEM ++ +KPD  S   L+    +N+K  EA  + + M  ++  L +   N +I
Sbjct: 316 EAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALI 375

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
             + +      A ++   MR  G +P +V+YN LL  Y    +  +A  L R M+   + 
Sbjct: 376 SGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVN 435

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +  +YN ++K   K+ + +KA   + +    G   + ++ + +I  + K  K+  A  L
Sbjct: 436 PDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALEL 495

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LAR 377
           F+++   G++ D V Y T+I     VG    A+ L  ++      P      I    L +
Sbjct: 496 FKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCK 555

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G  + A  +F          D   F  +I    +  +    + +F+ MR+ G  PD+  
Sbjct: 556 VGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLT 615

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
              +++      +   A +++  M E G +   +V  +++S+  ++
Sbjct: 616 FKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKSK 661



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 180/426 (42%), Gaps = 39/426 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP ++A N+ +  + +  +   A  + ++MR +G +PD  TY T+++       F  AI 
Sbjct: 260 SPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG 319

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             ++M +  +  D+     LI    K +   +A  + SR+ +  I   +  YN +I+ F 
Sbjct: 320 LWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFW 379

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +A    +A  +I  MR  G +PD V+Y                                 
Sbjct: 380 RAGSIDKAYKIISFMRTNGCEPDIVTY--------------------------------- 406

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             NI+++ Y  + M + A++L   M   G++P   SYN LL+   +     +A       
Sbjct: 407 --NILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDH 464

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  + V+ N +I  + K+ + + A  L +EM  +G++ +A+TY T+I      G  
Sbjct: 465 MEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYY 524

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           + A  LF+++ ++ ++ +  LY  M+    +VG    A+ +   + Q    P+T+   T 
Sbjct: 525 NLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTL 584

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L +  R  EA  +F+     G   D   F  +I       K     EV+E M   G 
Sbjct: 585 IYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGI 644

Query: 432 FPDSHI 437
             D  +
Sbjct: 645 ILDREV 650



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/417 (21%), Positives = 187/417 (44%), Gaps = 4/417 (0%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G    ++  + L++    +G F     +L +++   V+    LY  L+    +   +   
Sbjct: 118 GFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSV 177

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           I  F  +  SG     V YN  I V  K   F       +    +G      +YS  ++ 
Sbjct: 178 IETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISA 237

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
             ++++      +  +M+++ C  D+  CNI I    + +   DA ++   MR  G  P 
Sbjct: 238 LCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPD 297

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+Y T++    + + F EAI L+  M +++++ +V +   +I    K+ + ++A  L  
Sbjct: 298 VVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELAS 357

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
            M    IE +   Y+ +I+ + +AG +D+A  +   +R++G E D V Y  ++  Y  +G
Sbjct: 358 RMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIG 417

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
           ++  A++L+ ++      P+       +  L +  ++++A        + G   D     
Sbjct: 418 MMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCN 477

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +I+ F + KK  + +E+F++M   G   D+     ++N    +  +  A++L+ +M
Sbjct: 478 ILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM 534



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 2/201 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  +P  ++YN +L+ + +  Q + A     +  + G   D  + + LI  F K    
Sbjct: 430 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKV 489

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            SA+   ++M    +  D V Y  LI     +  Y+ A  +F ++ ++ I P++  YN M
Sbjct: 490 KSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIM 549

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   K   FK A+ +   M ++ V PDTV+++TL+    +  + +EAL++F +M     
Sbjct: 550 LHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGV 609

Query: 191 PLDLTTCNIMIDVYGQLDMAK 211
             D  T   +I   G LD  K
Sbjct: 610 EPDTLTFKYLIS--GLLDEGK 628



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 58/122 (47%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           A+  P+V  YN++L ++ +   ++ A  +F  M Q+ ++PD  T++TLI   GK      
Sbjct: 537 AQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIE 596

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++  + M    V  D + +  LI         + A  ++  +  +GI+ D      +I+
Sbjct: 597 ALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLIS 656

Query: 133 VF 134
           V 
Sbjct: 657 VL 658


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 218/456 (47%), Gaps = 7/456 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y  ++    +    + A  L  +M ++ + P+  TYS++I  + K+GM D A+  
Sbjct: 294 PNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRI 353

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M    +  +  +Y+ LI+   K      A+ +++ +K +G+  +    +  IN   +
Sbjct: 354 MKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKR 413

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            +  +EA  L + M  +G+  D V+Y++L++ + +  +   A ++  +M E     D+  
Sbjct: 414 GRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVA 473

Query: 197 CNIMIDVYGQLDMAK-DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N++I+  G L + K DA+ ++  +R++G+ P   +YNT++  Y +      AI L+  M
Sbjct: 474 YNVLIN--GLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEM 531

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  N +T N ++    K+ E E+A +++ EM   GI PN   +  ++    K  + 
Sbjct: 532 KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERA 591

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D    + ++L   G++ +  +Y ++I     +G+   A  +L+ + +     +T+     
Sbjct: 592 DTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNAL 651

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    ++  IE+A   + Q  + G    I  +  ++         +   E+  KM+ +G 
Sbjct: 652 IHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGL 711

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
            PD+ +   +++ +GK+   + A   Y EM  +G V
Sbjct: 712 DPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLV 747



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 221/493 (44%), Gaps = 51/493 (10%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM------- 69
           P+VF +N+++    +     LA    D +R   I  D  TY+T I  F ++G+       
Sbjct: 44  PNVFTHNILVHAWCKMGHLSLA---LDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGF 100

Query: 70  ----------FDSAIS-----------------WLQQMEQDRVSGD---------LVLYS 93
                     FDS                    W+     D ++ D         LV Y+
Sbjct: 101 LSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYT 160

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            LI    K    S+A+S++  + S G +PD+V Y+++IN   K  +  EA+ L+ EM + 
Sbjct: 161 TLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKM 220

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
           GV P+ V Y+ L++   +     E+    ++M       DL  C  +ID   +   + +A
Sbjct: 221 GVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEA 280

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           + +F ++ K+   P+ ++Y  ++  Y +      A  L R M++K++  NVVTY+++I  
Sbjct: 281 EAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIING 340

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y K    + A  +M++M ++ I PNA  Y+T+I    KAGK D A  L+ +++ +G+E +
Sbjct: 341 YTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEEN 400

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFR 389
             +    I   +R   +  A+ L   +     +      T L     + GR   A  +  
Sbjct: 401 SFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAE 460

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +  + G   D+  +  +I    R  KY +   V+  +R  G  PD      ++N+Y K  
Sbjct: 461 KMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQG 519

Query: 450 EFETADDLYSEMQ 462
           + E A  L++EM+
Sbjct: 520 KLENAIKLWNEMK 532



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 242/527 (45%), Gaps = 15/527 (2%)

Query: 20  FAYNVVLRNVLRAK-----QWELAHGLFDEMRQ----RGIAPDRYTYSTLITCFGKEGMF 70
           F  N++++   R       +W + + L D+M        + P+  TY+TLI+ + K+   
Sbjct: 114 FTCNILVKGFCRIGSVKYGEWVMDN-LIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGL 172

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+S  ++M  D    D+V YS++I    K    ++A ++   +   G+ P+ V Y  +
Sbjct: 173 SEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAIL 232

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   KA    E+ +   +M   GV  D V  +TL++   +  K  EA ++F  + ++NC
Sbjct: 233 VDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC 292

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T   MID Y +L     A+ L   M K  + P+VV+Y++++  Y +  +   A+ 
Sbjct: 293 IPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVR 352

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + + M  + I  N   Y T+I  + K+ + + A +L  EM+  G+E N+      I    
Sbjct: 353 IMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLK 412

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTI 366
           +  K++ A  L + + S G+ +D V Y +++  + + G  + A  +  ++ +     + +
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L R G+  +A  V+    + G   D + +  MI  + +  K  N I+++ +M
Sbjct: 473 AYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEM 531

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           +     P+S    +++    K  E E A D+ +EM   G   +  +H  +L+     +  
Sbjct: 532 KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERA 591

Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
           + +  + +RL        +E+++ +  +         A+ ++N M K
Sbjct: 592 DTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTK 638



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 180/390 (46%), Gaps = 50/390 (12%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V AYNV++  +LR  +++ A  ++  +R+ G+APDR TY+T+I  + K+G  ++AI    
Sbjct: 471 VVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWN 529

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV------------- 125
           +M+   V  + +  + L+    K  +  +AI + + +   GI P++              
Sbjct: 530 EMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCE 589

Query: 126 ----------------------AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
                                  YN++I V     + K A L++  M ++G+  DTV+Y+
Sbjct: 590 RADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYN 649

Query: 164 TLLNLYVENHKFVEALSVFAEM-NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
            L++ + ++    +AL+ + +M NE   P  + T N+++       +   A  +   M+ 
Sbjct: 650 ALIHGHFKSSHIEKALATYTQMLNEGVSP-GIRTYNLLLGGLLAAGLMSKAYEILSKMKD 708

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+DP    YNTL+  +G+     EAI  +  M  K +     TYN +I+ + K  + ++
Sbjct: 709 SGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQ 768

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIW---GKAGKLDR---------AAMLFQKLRSSGV 330
           A  L+ EMQ R + PN+ TY  +I  W    K  +LDR         A  LF ++   G 
Sbjct: 769 ARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGF 828

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
                    +   + R G+V  AK +L ++
Sbjct: 829 VPCENTLACISSTFARPGMVVDAKHMLKDM 858



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 205/461 (44%), Gaps = 46/461 (9%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           F  +  + N+ R ++ E A GL   M  +G+  DR  Y++L+  F K G   +A +  ++
Sbjct: 402 FIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEK 461

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M +  +  D+V Y+ LI    +L  Y  A S++S ++  G+ PD   YNTMIN + K   
Sbjct: 462 MAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGK 520

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN-CPLDLTTCN 198
            + A  L  EM+   V P++++ + L+    +  +   A+ V  EM     CP ++T   
Sbjct: 521 LENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP-NVTIHR 579

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +++   + + A    ++   +  MG+  +   YN+L+ V     +   A  +   M ++
Sbjct: 580 ALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKE 639

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  + VTYN +I  + KS   EKA     +M N G+ P   TY+ ++     AG + +A
Sbjct: 640 GISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKA 699

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             +  K++ SG++ D  LY T+I  + ++G    A +   E+     +P+          
Sbjct: 700 YEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKT--------- 750

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
                                 S +  +IE F++  K     E+  +M+     P+S   
Sbjct: 751 ----------------------STYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTY 788

Query: 439 ALVLNSYGKL-----------REFET-ADDLYSEMQEEGCV 467
            +++  +  L           + + T A  L++EM E+G V
Sbjct: 789 DILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFV 829



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 19/237 (8%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R+  +L+ + +E   S     YN ++    ++   E A   + +M   G++P   TY+ L
Sbjct: 628 RATLVLNNMTKEG-ISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLL 686

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +      G+   A   L +M+   +  D  LY+ LI    K+ +  +AI  +  + + G+
Sbjct: 687 LGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGL 746

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK------ 174
           VP    YN +I  F K     +AR L+ EM+ + V P++ +Y  L+  +    K      
Sbjct: 747 VPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDR 806

Query: 175 ------FVEALSVFAEMNE---VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
                   EA ++FAEMNE   V C     T   +   + +  M  DA  +   M K
Sbjct: 807 ISKKTYRTEARTLFAEMNEKGFVPCE---NTLACISSTFARPGMVVDAKHMLKDMYK 860



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 15/193 (7%)

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
           +L  EM + G+ PN  T++ ++  W K G L  A  L   +R+  +++D V Y T I  +
Sbjct: 32  DLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL---IRNVDIDVDTVTYNTAIWGF 88

Query: 345 ERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKD- 399
            + GL       L  + + +T        IL     R G ++   WV     D     D 
Sbjct: 89  CQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDG 148

Query: 400 -------ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                  +  +  +I  + +    +  + ++E+M S G+ PD    + ++N   K     
Sbjct: 149 TTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLT 208

Query: 453 TADDLYSEMQEEG 465
            A  L  EM + G
Sbjct: 209 EAKALLREMDKMG 221


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 205/433 (47%), Gaps = 10/433 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            +R  PS+  +  +L  + + K++++   LF++M+  GI+P  YT + ++ C  +     
Sbjct: 75  HSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPC 134

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A  +L +M +     DLV +++L+      +    A+++F ++   G  P++V Y T+I
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLI 194

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K +    A  +  +M + G++P+ V+Y++L++   E  ++ +A  +  +M +    
Sbjct: 195 HCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL---LRVYGEAELFGEA 248
            ++ T   +ID + ++    +A  L+  M +M + P V +Y  L   L  YG  +   EA
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD---EA 311

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             +F LM+      N VTY T+I  + KS   E  T +  EM  +G+  N ITY+ +I  
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQG 371

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----N 364
           +   G+ D A  +F ++ S     D   Y  ++      G V  A  +   +R+     N
Sbjct: 372 YCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDIN 431

Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
            +     I  + + G++E+A  +F   F  G   ++  +  MI  F R         +F+
Sbjct: 432 IVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFK 491

Query: 425 KMRSAGYFPDSHI 437
           KM+  G+ P+  +
Sbjct: 492 KMKEDGFLPNESV 504



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/448 (22%), Positives = 206/448 (45%), Gaps = 4/448 (0%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  +LRN L   Q+  A  LF  M      P    ++ L++   K   FD  IS  +QM+
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +S  L   + ++    + S   +A     ++   G  PDLV + ++++ F      +
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A  L +++   G +P+ V+Y+TL++   +N     A+ +F +M +     ++ T N ++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
               ++    DA  L   M K GI P+V+++  L+  + +     EA  L+++M +  + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V TY  +I         ++A  +   M++ G  PN +TY+T+I  + K+ +++    +
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---RQPNTI-PRETAITILAR 377
           F ++   G+  + + Y  +I  Y  VG    A+ + +++   R P  I      +  L  
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            G +E+A  +F+         +I  +  +I+   +  K  +  ++F  + S G  P+   
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469

Query: 438 IALVLNSYGKLREFETADDLYSEMQEEG 465
              +++ + +      AD L+ +M+E+G
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDG 497



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           ++ E   Y P+   Y  ++    ++K+ E    +F EM Q+G+  +  TY+ LI  +   
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLV 375

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           G  D A     QM   R   D+  Y+ L++         KA+ IF  ++   +  ++V Y
Sbjct: 376 GRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTY 435

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             +I    K    ++A  L   +  +G+KP+ ++Y+T+++ +       EA ++F +M E
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 232/524 (44%), Gaps = 80/524 (15%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            R SP+VF YNV++  + + +Q + A  LFDEM  R + P   TY+TLI  + K+G     
Sbjct: 582  RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDG----- 636

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                                          +  K+  +  R+K+  I P L+ +NT++  
Sbjct: 637  ------------------------------NPEKSFKVRERMKADNIEPSLITFNTLLKG 666

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
              KA + ++A  ++ EM++QG  PD  ++S L + Y  N K   AL V+    +    ++
Sbjct: 667  LFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMN 726

Query: 194  LTTCNIMIDVY---GQLDMAKD-----------ADRLFW--------------------- 218
              TC+I+++     GQ++ A++            + + +                     
Sbjct: 727  AYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKID 786

Query: 219  SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            +M K G+ P  ++YN L+R + E      A      M+ K +  +V TYN +I  YG+  
Sbjct: 787  AMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKY 846

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            E +K  +L++EM++ G  PN ++Y T+I    K  KL  A ++ + +   GV  +  +Y 
Sbjct: 847  EFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYN 906

Query: 339  TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
             +I      G +  A R   E+ +     N +   T I  L+  G++ EA  +  +    
Sbjct: 907  MLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRK 966

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            G   D+  +  +I  +         I ++E+M+++G  P      L+++   K    E  
Sbjct: 967  GLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTK-EGIELT 1025

Query: 455  DDLYSEM--QEEGCVFSDQVHFQMLSLYG-ARKDFNMLESLFER 495
              ++ EM  Q +  V++  +H    +++G   K FN+ + + E+
Sbjct: 1026 KKIFGEMSLQPDLLVYNGVLH--CYAVHGDMDKAFNLQKQMIEK 1067



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 232/501 (46%), Gaps = 43/501 (8%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            PS+  +N +L+ + +A   E A  +  EM+ +G  PD +T+S L   +      D+A+  
Sbjct: 655  PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +      +  +    S L+    K     KA  I  R  + G+VP+ V YNTMI+ + +
Sbjct: 715  YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                  AR+ I+ M +QG+KPD ++Y+ L+  + E      A     +M        + T
Sbjct: 775  KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVET 834

Query: 197  CNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             NI+I  YG+     + D+ F  +++M   G  P+VVSY TL+    +     EA  + R
Sbjct: 835  YNILIGGYGR---KYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 891

Query: 254  LMQ-----------------------------------RKEIEQNVVTYNTMIKIYGKSL 278
             M+                                   +K IE N+VTYNT+I     + 
Sbjct: 892  DMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG 951

Query: 279  EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            +  +A +++ E+  +G++P+  TY+++I+ +  AG + R   L++++++SG++     Y 
Sbjct: 952  KLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH 1011

Query: 339  TMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             +I    + G +   K++  E+  QP+ +     +   A  G +++A  + +Q  +    
Sbjct: 1012 LLISLCTKEG-IELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIG 1070

Query: 398  KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
             D + +  +I    +  K   V  + ++M++    P++    +++  + +++++  A   
Sbjct: 1071 LDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVW 1130

Query: 458  YSEMQEEGCVFSDQVHFQMLS 478
            Y EMQE+G +    +  +++S
Sbjct: 1131 YREMQEKGLLLDVCIGDELVS 1151



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 202/457 (44%), Gaps = 7/457 (1%)

Query: 16  SPSV---FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           SPS+   F+Y ++   +  +K    A  LF  +R  GI P   + + L+    K   F  
Sbjct: 476 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRV 535

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            I+    + +        +Y   I+ A KLSD  K + +F+R+K   I P +  YN +I+
Sbjct: 536 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLID 595

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K +  K+A  L +EM  + + P  ++Y+TL++ Y ++    ++  V   M   N   
Sbjct: 596 GLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEP 655

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
            L T N ++    +  M +DA+ +   M+  G  P   +++ L   Y   +    A+ ++
Sbjct: 656 SLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVY 715

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
                  ++ N  T + ++    K  + EKA  ++     +G+ PN + Y+T+I  + + 
Sbjct: 716 ETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRK 775

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR-ETA 371
           G L  A M    +   G++ D + Y  +I  +  +G + +A++ +++++     P  ET 
Sbjct: 776 GDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETY 835

Query: 372 ITILARAGRIEEATWVF---RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
             ++   GR  E    F   ++  D G + ++  +G +I    +  K      V   M  
Sbjct: 836 NILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 895

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            G  P+  I  ++++      + E A     EM ++G
Sbjct: 896 RGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/418 (22%), Positives = 182/418 (43%), Gaps = 48/418 (11%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            E+    P   AYN ++R        E A    ++M+ +G++P   TY+ LI  +G++  F
Sbjct: 789  EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            D     L++ME +                                   G +P++V+Y T+
Sbjct: 849  DKCFDLLKEMEDN-----------------------------------GTMPNVVSYGTL 873

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            IN   K     EA+++  +M ++GV P+   Y+ L++      K  +A     EM +   
Sbjct: 874  INCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGI 933

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             L+L T N +ID         +A+ +   + + G+ P V +YN+L+  Y  A      I 
Sbjct: 934  ELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIA 993

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            L+  M+   I+  + TY+ +I +  K    E    +  EM    ++P+ + Y+ ++  + 
Sbjct: 994  LYEEMKTSGIKPTLKTYHLLISLCTKE-GIELTKKIFGEMS---LQPDLLVYNGVLHCYA 1049

Query: 311  KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
              G +D+A  L +++    + +D   Y ++I+   +VG +   + L+ E++     P   
Sbjct: 1050 VHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEAD 1109

Query: 371  AITILARAGRIEEATWV-----FRQAFDAGEVKDISVFGCMIELFS---RNKKYANVI 420
               I+ + G  E   ++     +R+  + G + D+ +   ++       R+K+  NVI
Sbjct: 1110 TYDIIVK-GHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVI 1166



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/429 (20%), Positives = 185/429 (43%), Gaps = 31/429 (7%)

Query: 106 SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
           S+A  +F  L++ GI P   +   +++   K K F+    +   + E   +P    Y   
Sbjct: 499 SEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 558

Query: 166 LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
           +   V+     + L +F  M        +   N++ID   ++   KDA++LF  M    +
Sbjct: 559 IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            PS+++YNTL+  Y +     ++  +   M+   IE +++T+NT++K   K+   E A N
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           ++ EM+++G  P+A T+S +   +    K D A  +++    SG++++      ++ A  
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNA-- 736

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
                                        L + G+IE+A  +  +    G V +  ++  
Sbjct: 737 -----------------------------LCKEGQIEKAEEILGREMAKGLVPNEVLYNT 767

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           MI+ +SR           + M   G  PD      ++ ++ +L + E A+   ++M+ +G
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              S + +  ++  YG + +F+    L + ++ +  +     +  +     + ++L +A 
Sbjct: 828 VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 887

Query: 526 RIMNRMNKR 534
            +   M  R
Sbjct: 888 IVKRDMEDR 896



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/408 (21%), Positives = 167/408 (40%), Gaps = 69/408 (16%)

Query: 80  MEQDRV-SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           ++Q+R+ +   VLYS L   +   +   +  S FS L S  +  D  +Y  +  +  ++K
Sbjct: 439 LQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFS-LSSPSLKHDF-SYLLLSVLLNESK 496

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
           +  EA  L   +R +G+ P + S + LL+  V+  +F   ++VF  + E +         
Sbjct: 497 MISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD--------- 547

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
                                       PS   Y   ++   +    G+ + LF  M+  
Sbjct: 548 --------------------------FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 581

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I   V  YN +I    K  + + A  L  EM  R + P+ ITY+T+I  + K G  +++
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
             + +++++  +E                               P+ I   T +  L +A
Sbjct: 642 FKVRERMKADNIE-------------------------------PSLITFNTLLKGLFKA 670

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +E+A  V  +  D G V D   F  + + +S N K    + V+E    +G   +++  
Sbjct: 671 GMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTC 730

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
           +++LN+  K  + E A+++      +G V ++ ++  M+  Y  + D 
Sbjct: 731 SILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL 778


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 217/510 (42%), Gaps = 77/510 (15%)

Query: 2   SVAILDWINEEARY--SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           S   L   +E A +  +P V   N VLR +  A +W+    +  EM Q GI P   TY+T
Sbjct: 183 STLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNT 242

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVS------------------GDLVLYSNLIE---L 98
           L+  F KEG  D     L++ME                       GDL   + ++E   L
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL 302

Query: 99  ARKLSDYS---------------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
           ++K S ++               KA  +   +++ GI+P +V YN MI+   ++   + A
Sbjct: 303 SKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
           ++   EMR  G++PD ++Y++LLN Y +     EAL +F ++        + T NI+ID 
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDG 422

Query: 204 YGQLDMAKDADRL-----------------------------------FWSMRKMGIDPS 228
           Y +L   ++A RL                                   F  M   G+ P 
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
             +YNT +R         +A  L  +M  + I  + VTYN +I    K+     A +L  
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           +M + G++P+ ITY+ +I    + G L  A   F+ + S G+    V Y   I AY R G
Sbjct: 543 KMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602

Query: 349 LVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +  A    +++L E  +PN I     I  L R GR + A   F +  + G V +   + 
Sbjct: 603 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYT 662

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            +I+   +   + + +  + +M   G  PD
Sbjct: 663 LLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 1/337 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN +L    +A   + A  LF ++R  G+AP   TY+ LI  + + G  + A   
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M +     D+  Y+ L++ +      + A   F  + S G+ PD  AYNT I     
Sbjct: 436 KEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT 495

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A  L E M  +G+  DTV+Y+ L++   +     +A  +  +M       D  T
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
              +I  + +  + ++A + F  M   G+ PS V+Y   +  Y        A   FR M 
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E N +TYN +I    ++   + A     EM  RG+ PN  TY+ +I    K G  +
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            A   + ++  +G+  D + ++ +   ++  G + HA
Sbjct: 676 DAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHA 711



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 195/474 (41%), Gaps = 55/474 (11%)

Query: 44  EMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLS 103
           E   R   PD  T STL             +S   +M    V+ D+   + ++ +    +
Sbjct: 171 ECTDRDATPD--TCSTL------------CLSAFHEMASHGVAPDVKDCNRVLRVLSDAA 216

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM--REQGVKPDTVS 161
            +    ++ + +   GI P +V YNT+++ F K     +  +L++EM  R  G  P+ V+
Sbjct: 217 RWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVT 276

Query: 162 YSTLLNLY------------VENHKFVEALSVFA----------------------EMNE 187
           ++ ++               VE  +  +  S F                       EM  
Sbjct: 277 HNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMEN 336

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                 + T N MI    Q    + A   F  MR MG+ P V++YN+LL  Y +A    E
Sbjct: 337 EGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKE 396

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+ LF  ++   +   V+TYN +I  Y +  + E+A  L +EM  +G  P+  TY+ ++ 
Sbjct: 397 ALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMK 456

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQP 363
               A  L  A   F ++ S G++ D   Y T I A   +G +A A RL    + E    
Sbjct: 457 GSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISS 516

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           +T+     I  L + G + +A  +  +    G   D   + C+I             + F
Sbjct: 517 DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFF 576

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           + M S G  P +    + +++Y +     +A   + +M EEG V  +++ + +L
Sbjct: 577 KDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG-VEPNEITYNVL 629



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 54/124 (43%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +PS   Y V +    R      A+G F +M + G+ P+  TY+ LI    + G    A  
Sbjct: 585 APSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYR 644

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M +  +  +   Y+ LI+   K  ++  A+  +  +  +GI PD + +  +   F 
Sbjct: 645 HFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFD 704

Query: 136 KAKL 139
           +  +
Sbjct: 705 EGHM 708


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 227/531 (42%), Gaps = 63/531 (11%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ V+  +  A + + A  LF+EM+   + PD +TY+ LI  F K G+   A 
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            W  +M +D  + ++V Y+ LI    K    S A  +F  + S G +P++V Y  +I+  
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 135 GKAKLFKEARLLIEEMREQGVKPDT----------------VSYSTLLNLYVENHKFVEA 178
            K+   ++A  +   MR     PD                  +Y  L++   + HK  EA
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-R 237
             +   M+   C  +    + +ID + ++    +A  +F  M + G  P+V +Y++L+ R
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
           ++ +  L   A+ +   M       NV+ Y  MI    K  + ++A  LM  M+ +G  P
Sbjct: 716 LFKDKRL-DLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           N +TY+ +I  +GKAGK+D+   L +++ + G   + V Y+ +I      GL+  A +LL
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 358 HELRQP---------------------------NTIPRETAITIL----------ARAGR 380
            E++Q                            + I    A+ I+           +AGR
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGR 894

Query: 381 IEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           +E A  + ++  +  +    D  ++  +IE  S   K     E++  M   G  P+  I 
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
             ++    ++  +E A      +Q   C+    V F      G+  D+  L
Sbjct: 955 FYLVKGLIRINRWEEA------LQLSDCICQMMVDFVREGFLGSSHDYEFL 999



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 196/457 (42%), Gaps = 29/457 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQW------ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           P    YN+++  +   ++       ELA   + EM    +  ++   S L  C    G F
Sbjct: 402 PGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKF 461

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S +++M       D   YS +I L    S    A  +F  +KS+ +VPD+  Y  +
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F K  L ++AR   +EM   G  P+ V+Y+ L++ Y++  K   A  +F  M    C
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T   +ID + +    + A +++  MR     P V  Y                  
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY------------------ 623

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
            F++      + N+ TY  ++    K+ + ++A +L+  M   G EPN I Y  +I  + 
Sbjct: 624 -FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI---VAYERVGLVAHA-KRLLHELRQPNTI 366
           K GKLD A M+F K+   G   +   Y ++I      +R+ L      R+L     PN I
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742

Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
                I  L + G+ +EA  +     + G   ++  +  MI+ F +  K    +E+  +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            + G  P+     +++N        + A  L  EM++
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/477 (21%), Positives = 214/477 (44%), Gaps = 29/477 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS   YN ++R  L A + + A+ +  EM   G   D YT    +    K G +  A+
Sbjct: 228 YKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREAL 287

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           + +   E++    D V+Y+ +I    + S + +A+   SR++SS  +P++V Y  ++   
Sbjct: 288 ALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGC 344

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + +     + ++  M  +G  P    +++L++ Y  +  +  A  +  +M +  C    
Sbjct: 345 LRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGY 404

Query: 195 TTCNIMI-DVYG-----QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
              NI+I  + G      LD+ + A++ +  M    +  + V+ + L R    A  F +A
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
             + R M  K    +  TY+ +I +   + + + A  L +EM++  + P+  TY+ +I  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
           + K G L +A   F ++   G   + V Y  +I AY +   ++ A  L   +     IP 
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 369 ETAITIL----ARAGRIEEATWVFRQ--------------AFDAGEVKDISVF--GCMIE 408
               T L     ++G+IE+A  ++ +                D G ++D ++F  G +++
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              +  K     ++ + M   G  P+  +   +++ + K+ + + A  ++++M E G
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 201/472 (42%), Gaps = 33/472 (6%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R   W +A      ++  G  P R TY+ L+  F +    D+A    ++M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
              + D       + L  K   + +A+++  + +      D V Y  MI+   +A LF+E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEE 317

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+ V+Y  LL   +   +      + + M    C       N +I 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQRKEIE 261
            Y +      A +L   M   G  P  V YN L+  + G  +L   ++ +  L ++   E
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL--PSLDVLELAEKAYGE 435

Query: 262 Q-------NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
                   N V  + + +    + + EKA ++++EM ++G  P+  TYS +I +   A K
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           +D A +LF++++S+ V  D   Y  +I ++ +VGL+  A++   E+ +    PN +    
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I    +A ++  A  +F      G + ++  +  +I+   ++ +     +++ +MR   
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 431 YFPDSHIIALV---------LNSYGKL-------REFETADDLYSEMQEEGC 466
             PD  +   +         + +YG L        + + A DL   M  EGC
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 7/203 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  Y P+V+ Y+ ++  + + K+ +LA  +   M +   AP+   Y+ +I    K G  D
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +  ME+     ++V Y+ +I+   K     K + +  ++ + G  P+ V Y  +I
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE-VNC 190
           N    A L  +A  L++EM++         Y  ++  +  N +F+ +L +  E+ E V  
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAV 876

Query: 191 PLDLTTCNIMIDVY---GQLDMA 210
           P+ +    I+ID +   G+L++A
Sbjct: 877 PI-IPAYRILIDSFCKAGRLELA 898



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 4/177 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y  ++    +A + +    L  +M  +G AP+  TY  LI      G+ 
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A   L +M+Q      +  Y  +IE   +  ++  ++ +   +  +  VP + AY  +
Sbjct: 828 DDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRIL 885

Query: 131 INVFGKAKLFKEARLLIEEMREQG--VKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           I+ F KA   + A  L +EM         D   YS+L+       K  +A  ++A+M
Sbjct: 886 IDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADM 942


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 220/453 (48%), Gaps = 6/453 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y+ V+       + +    L  EM+ +G+ P+ YTY+++I    K G  D A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L++M    +  D V+Y+ LI+   KL +   A  +F  ++   IVPD +AY  +I    
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +     EA  +  +M  +GV+PD V+Y+TL++ Y ++ +  +A S+  +M +     ++ 
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   + D   +L     A+ L   M   G+  ++ +YN+L+    ++    +A+ L   M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           +   +  + +T+ T++  Y K+ E  KA  L++EM +RG++P  IT++ ++  +  +G L
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           +    L   +   G+  +   Y +++  Y     +     +   +     +P      IL
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
                +A  ++EA ++ ++  + G     S +  +I+ F + KK +   E+FE+MR  G 
Sbjct: 367 IKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGM 426

Query: 432 FPDSHIIALVLN-SYGKLREFETADDLYSEMQE 463
             D+ I  L ++ SYG+    ETA +L  E  E
Sbjct: 427 AADAEIYNLFVDISYGE-GNMETALELCDEAIE 458



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 195/425 (45%), Gaps = 39/425 (9%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M+ RG APD  +YST+I  +   G     +  +Q+M+   +  +L  Y+++I L  K   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
              A  +   + + GIVPD V Y T+I+ F K    + A  L +EM +Q + PD ++Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           ++                           L  C  M++          AD++F  M   G
Sbjct: 121 VI-------------------------CGLCRCGKMME----------ADKVFNKMFSRG 145

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           ++P  V+Y TL+  Y ++    +A  L   M +  +  NVVTY  +     K  + + A 
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+ EM  +G++ N  TY++++    K+G + +A  L +++  +G+  D + + T++ AY
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G +  A  LL E+     QP  I     +     +G +E+   +     + G + + 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
           + +  +++ +          E+++ M + G  PDS+   +++  + K R  + A  L+ E
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385

Query: 461 MQEEG 465
           M E+G
Sbjct: 386 MAEKG 390



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 171/331 (51%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+ R  P   AY  V+  + R  +   A  +F++M  RG+ PD  TY+TLI  + K G  
Sbjct: 107 EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A S   QM Q  ++ ++V Y+ L +   KL     A  +   +   G+  ++  YN++
Sbjct: 167 EKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   K+   ++A  L+EEM   G+ PDT++++TL++ Y +  + V+A  +  EM +   
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T N++++ +    M +D +RL   M + GI P+  +YN+L++ Y           
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +++ M  + +  +  TYN +IK + K+   ++A  L +EM  +G    A +Y++II  + 
Sbjct: 347 IYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFF 406

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           K  K+  A  LF+++R  G+  D  +Y   +
Sbjct: 407 KKKKISEARELFEEMRREGMAADAEIYNLFV 437


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 203/428 (47%), Gaps = 22/428 (5%)

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYS------------KAISIFSRLKSSGI 120
           A+  L+Q+ + R++ +  L+  L     +LS  S            KA      ++  G 
Sbjct: 145 ALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGF 204

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P++V+YNT+I+ +      + AR +++ MR +G++PD+ +Y +L++   +  +  EA  
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW---SMRKMGIDPSVVSYNTLLR 237
           +F +M E+    +  T N +ID Y       D +R F     M K GI PSV +YN L+ 
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCN---KGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321

Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
                   GEA  + + M++K I  + +TYN +I  Y +    ++A +L  EM ++GIEP
Sbjct: 322 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEP 381

Query: 298 NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             +TY+++I +  +  ++  A  LF+K+   GV  D +++  MI  +   G V  A  LL
Sbjct: 382 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLL 441

Query: 358 HELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            E+ + +  P E     L     R G++EEA  +  +    G   D   +  +I  + R 
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
               +   V ++M S G+ P       ++    K +E + A++L  EM  +G    D  +
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561

Query: 474 FQMLSLYG 481
             ++   G
Sbjct: 562 LSLIEGMG 569



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 179/369 (48%), Gaps = 1/369 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P+V +YN ++         E A  + D MR +GI PD YTY +LI+   KEG  + A 
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M +  +  + V Y+ LI+      D  +A S    +   GI+P +  YN +++  
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                  EA  +I+EMR++G+ PD ++Y+ L+N Y        A  +  EM         
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T   +I V  + +  K+AD LF  +   G+ P V+ +N ++  +        A  L + 
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M RK +  + VT+NT+++   +  + E+A  L+ EM+ RGI+P+ I+Y+T+I+ +G+ G 
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-TAIT 373
           +  A  +  ++ S G     + Y  +I    +      A+ LL E+      P + T ++
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 563

Query: 374 ILARAGRIE 382
           ++   G ++
Sbjct: 564 LIEGMGNVD 572



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 185/398 (46%), Gaps = 7/398 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           LFDE+    ++ DR +  + I     EG    A  ++  ME      ++V Y+ +I    
Sbjct: 163 LFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 219

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
              +   A  I   ++  GI PD   Y ++I+   K    +EA  L ++M E G+ P+ V
Sbjct: 220 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 279

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           +Y+TL++ Y        A S   EM +      ++T N+++          +AD +   M
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           RK GI P  ++YN L+  Y        A  L   M  K IE   VTY ++I +  +    
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A +L +++ ++G+ P+ I ++ +I      G ++RA ML +++    V  D V + T+
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           +    R G V  A+ LL E++    +P+ I   T I+   R G I++A  V  +    G 
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
              +  +  +I+   +N++     E+ ++M + G  PD
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 141/299 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN ++         E A    DEM ++GI P   TY+ L+     EG    A   
Sbjct: 276 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 335

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +++M +  +  D + Y+ LI    +  +  +A  + + + S GI P  V Y ++I V  +
Sbjct: 336 IKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 395

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               KEA  L E++ +QGV PD + ++ +++ +  N     A  +  EM+  + P D  T
Sbjct: 396 RNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVT 455

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +    ++A  L   M+  GI P  +SYNTL+  YG      +A  +   M 
Sbjct: 456 FNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEML 515

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                  ++TYN +IK   K+ E + A  L++EM N+GI P+  TY ++I   G    L
Sbjct: 516 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 107/231 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    YN+++    R    + A  L +EM  +GI P   TY++LI    +      A   
Sbjct: 346 PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 405

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +++    VS D+++++ +I+      +  +A  +   +    + PD V +NT++    +
Sbjct: 406 FEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 465

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
               +EAR+L++EM+ +G+KPD +SY+TL++ Y       +A  V  EM  +     L T
Sbjct: 466 EGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLT 525

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
            N +I    +      A+ L   M   GI P   +Y +L+   G  +   E
Sbjct: 526 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 39/247 (15%)

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+    + NVV+YNT+I  Y      E A  ++  M+ +GIEP++ TY ++I+   K G
Sbjct: 198 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 257

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
           +L+ A+ LF K+   G+  + V Y T+I  Y   G +  A     E+ +   +P  +   
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 317

Query: 374 ILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           +L  A    GR+ EA                                    ++ ++MR  
Sbjct: 318 LLVHALFMEGRMGEAD-----------------------------------DMIKEMRKK 342

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML 489
           G  PD+    +++N Y +    + A DL++EM  +G   +   +  ++ +   R      
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402

Query: 490 ESLFERL 496
           + LFE++
Sbjct: 403 DDLFEKI 409


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 236/520 (45%), Gaps = 39/520 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +L  +  +    P+ F+YNVV+  + RA +   A  +FDEM +R + P+  TY+T+I
Sbjct: 46  AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 105

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                    D  I            GDL       E   +L D         ++   G+ 
Sbjct: 106 ---------DGHIK----------GGDL-------EAGFRLRD---------QMVCHGLK 130

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN +++   +A    E   L++EM  Q + PD  +YS L +    N      LS+
Sbjct: 131 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 190

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +  +    +   TC+I+++   +      A+ +  S+   G+ P+ V YNTL+  Y +
Sbjct: 191 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 250

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                 A   F  M+ + I+ + +TYN +I    K+     A +L+ EMQ+ G+ P   T
Sbjct: 251 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 310

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T+I  +G+ G+L++  ++  +++ +G++ + V Y +++ A+ + G +  A  +L ++ 
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370

Query: 362 QPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
             + +P       +  A    G  ++A  +  +    G    I  +  +I+      + +
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              E+   + +    PD+     ++++       + A DL   M + G   + + + Q++
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 490

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           S  G     N +E L++++  ++ +    +H+++   Y +
Sbjct: 491 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 44/411 (10%)

Query: 95  LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM-REQ 153
           L+ L R  +D  +A  I   L S+G  PD  A+N  +     A    EA  ++  M R+ 
Sbjct: 2   LLSLGRH-ADVRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDG 57

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
              P+  SY+ ++       +  +A+ VF EM E     +  T N MID + +    +  
Sbjct: 58  APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN----- 268
            RL   M   G+ P+ ++YN LL     A   GE   L   M  +++  +  TY+     
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177

Query: 269 --------TMIKIYGKSLEH----------------------EKATNLMQEMQNRGIEPN 298
                    M+ ++GK L++                        A  ++Q + N G+ P 
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 237

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            + Y+T+I  + + G+L+ A   F +++S  ++ D + Y  +I    +   + +A+ LL 
Sbjct: 238 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 297

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E++     P      T I    R G++E+   V  +  + G   ++  +G ++  F +N 
Sbjct: 298 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           K    + + + M      P++ +   ++++Y +    + A  L  +M+  G
Sbjct: 358 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408


>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
 gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
          Length = 647

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 226/505 (44%), Gaps = 69/505 (13%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM-FDS 72
           RY  +VFA++ ++    R+     A G+ + M+  G+ P   +Y+ +I   GK G+    
Sbjct: 18  RYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRF 77

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
            + + +QM QD +  D   +++L+    +      A ++F  +   G   D+  YNT ++
Sbjct: 78  TLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVD 137

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              K    + A  ++ +M    +KP+ V+YSTL+                          
Sbjct: 138 AICKCGNMELATQVVLDMEANNIKPNVVTYSTLM-------------------------- 171

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
                    D + +L+   +A +L   M+ +GI    V YNTLL +Y +   + E   + 
Sbjct: 172 ---------DGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVC 222

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+   IE++ VTYN++I  YGK    +    L+Q+M+ +G+ P+ +TYST+I I+ KA
Sbjct: 223 EDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKA 282

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
           G    A  ++   + SG++ D VL+ + I    + GLV  A  LL E+     +PN +  
Sbjct: 283 GMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTY 342

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI----ELFSRNKKYAN------ 418
            T I    ++  + E         D G +  + V+G  I       +R  + A       
Sbjct: 343 NTIIDAFGKSKILTEE--------DPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMRR 394

Query: 419 ------VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
                 ++E+F+KM   G  P+    + +LN+  +   FE A  L  +++    +F + V
Sbjct: 395 SQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLR----LFDNSV 450

Query: 473 HFQMLSLY-GARKDFNMLESLFERL 496
           +     L  G  + ++   SLF +L
Sbjct: 451 YGVAYGLLMGHLEAWSQARSLFNQL 475



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 27/316 (8%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E     P+V  Y+ ++    + ++++ A  L ++M+  GI  DR  Y+TL+  + K G +
Sbjct: 156 EANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKY 215

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D   +  + ME   +  D V Y++LI    K         +   +++ G+ P ++ Y+T+
Sbjct: 216 DEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTL 275

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+++ KA +  +A  +  + +E G+K D V +S+ ++   +N     ALS+  EM ++  
Sbjct: 276 IDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGI 335

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T N +ID +G+  +  + D        MGI          + VYG     G+ + 
Sbjct: 336 KPNVVTYNTIIDAFGKSKILTEEDP-----GNMGI----------VGVYG-----GQIVR 375

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               + R       V          +S E      L Q+M  +G+ PN +T+S I+    
Sbjct: 376 ATNPVTRGGRSATDVRMR-------RSQELFFILELFQKMVQQGVRPNVVTFSAILNACS 428

Query: 311 KAGKLDRAAMLFQKLR 326
           +    + AA+L ++LR
Sbjct: 429 RCNNFEDAALLLEQLR 444


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 188/424 (44%), Gaps = 5/424 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +YN ++    +  +   A     +M   G+ P+ +TY+T+I  F K GM  +A  
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+         D   YS+LI       D ++A+++F      G    ++ YNT++    
Sbjct: 343 ILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS 402

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L  +A  L+++M E G  PD  +Y+ ++N   +     +A  +  +     C  D+ 
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +ID Y +      A  +  +M   GI P V++YNTLL    +A      +  F+ M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    N++TYN +I+ + K  +  +A  L +EM+ RG+ P+ +T  T+I      G+L
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 316 DRAAMLFQKL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           D+A  LF  + +         ++  MI A+     V+ A++L H++   +  P      +
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 375 L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
           +     + G I+ A     +    G V   +  G ++       + +  + +   M   G
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 431 YFPD 434
             P+
Sbjct: 703 IVPE 706



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 229/520 (44%), Gaps = 40/520 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT-------------------- 56
           PSV +YN ++  ++    +  AH ++  M+  GI PD YT                    
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 57  ---------------YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
                          Y  +I+ F KE     A     +M +  +  D++ ++ LI +  K
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  ++  +FS++   G+ P+L  +N  I    +     EA  L+E +  +G+ PD +S
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y+TL+  + ++ K VEA     +M       +  T N +I+ + +  M ++AD++     
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G  P   +Y++L+           A+ +F     K  + +++ YNT++K   K     
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  LM++M   G  P+  TY+ ++    K G L  A  +     + G   D   + T+I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y +   +  A  +L  +      P+ I   T +  L +A +++     F+   + G  
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            +I  +  +IE F +++K +  +E+F++M++ G  PD   +  ++       E + A +L
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 458 YSEMQEE-GCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +  +++E    +S  +   M++ +  + + +M E LF ++
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 211/461 (45%), Gaps = 9/461 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +  +N ++  + +    + +  LF ++ +RG+ P+ +T++  I    ++G  D A  
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ +  + ++ D++ Y+ LI    K S   +A     ++ +SG+ P+   YNT+IN F 
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA + + A  ++ +   +G  PD  +YS+L+N    +     A++VF E  E      + 
Sbjct: 333 KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N ++    +  +   A +L   M + G  P + +YN ++    +     +A  +    
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K    ++ T+NT+I  Y K    +KA  ++  M + GI P+ ITY+T++    KA KL
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
           D     F+ +   G   + + Y  +I ++ +   V+ A  L  E++     P+ +   T 
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTL 572

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVK---DISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           I  L   G +++A  +F       E K     ++F  MI  F      +   ++F KM  
Sbjct: 573 ICGLCSNGELDKAYELFVTI--EKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGG 630

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           +   PD++   ++++SY K    + A     E   +G V S
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 218/464 (46%), Gaps = 9/464 (1%)

Query: 41  LFDEMR-QRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL-VLYSNLIEL 98
           +F++++ + G      TY  +I   G  G F++    L +M ++  S  L  +Y  ++  
Sbjct: 26  MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRD 85

Query: 99  ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
             +     +A+++F R+      P + +YN ++N+  +   F +A  +   M++ G+ PD
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
             +++  +  +    +   AL +   M    C  +  +   +I  + + +   +A  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
            M K GI P ++++N L+ V  +     E+  LF  + ++ +  N+ T+N  I+   +  
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             ++A  L++ + + G+ P+ I+Y+T+I  + K  KL  A     K+ +SGVE +   Y 
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFDA 394
           T+I  + + G++ +A ++L +      IP E    + I  L   G +  A  VF +A + 
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
           G    I ++  +++  S+       +++ + M   G  PD     LV+N   K+     A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
           + + ++   +GC+  D   F  L + G  K  NM +++ E LD+
Sbjct: 446 NGILNDAIAKGCI-PDIFTFNTL-IDGYCKQRNMDKAI-EILDT 486



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 165/376 (43%), Gaps = 17/376 (4%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  F Y+ ++  +        A  +F E  ++G       Y+TL+    K+G+   A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             ++ M +   S D+  Y+ ++    K+   S A  I +   + G +PD+  +NT+I+ +
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +   +A  +++ M   G+ PD ++Y+TLLN   +  K    +  F  M E  C  ++
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+I+ + +     +A  LF  M+  G+ P +V+  TL+          +A  LF  
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 255 MQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           ++++ +   +   +N MI  +   L    A  L  +M      P+  TY  +I  + K G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            +D A     +  S G          ++ ++   G V +   + H L +   I     I 
Sbjct: 652 NIDLAHTFLLENISKG----------LVPSFTTCGKVLNCLCVTHRLSEAVVI-----IN 696

Query: 374 ILARAGRI-EEATWVF 388
           ++ + G + EE   +F
Sbjct: 697 LMVQNGIVPEEVNSIF 712



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 7/323 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  S+  YN +++ + +      A  L  +M + G +PD +TY+ ++    K G   
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L          D+  ++ LI+   K  +  KAI I   + S GI PD++ YNT++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   KA+         + M E+G  P+ ++Y+ L+  + ++ K  EA+ +F EM      
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 192 LDLTT-CNIMIDVY--GQLDMAKDADRLFWSMRK-MGIDPSVVSYNTLLRVYGEAELFGE 247
            D+ T C ++  +   G+LD A +   LF ++ K      S   +N ++  +        
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYE---LFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSM 620

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  LF  M   +   +  TY  MI  Y K+   + A   + E  ++G+ P+  T   ++ 
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLN 680

Query: 308 IWGKAGKLDRAAMLFQKLRSSGV 330
                 +L  A ++   +  +G+
Sbjct: 681 CLCVTHRLSEAVVIINLMVQNGI 703



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 52/117 (44%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           I +E ++S S   +N+++          +A  LF +M     APD YTY  +I  + K G
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
             D A ++L +     +         ++         S+A+ I + +  +GIVP+ V
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 221/472 (46%), Gaps = 13/472 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK------EGMF 70
           P+ F +  ++     A+    A    +EM+  G+     TYS LI+ F K       G  
Sbjct: 330 PNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNM 389

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A   +++ME+D +   + +Y +++     + + +K + +F RLK  G  P +++Y  +
Sbjct: 390 ERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCL 449

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N++ K     +A  + +EM   G+K +  +YS L+N ++  H F  A ++F EM     
Sbjct: 450 LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGL 509

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D    N++I+ + ++     A  +   M+K  + PS  ++  ++  Y  A     A+ 
Sbjct: 510 QPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALD 569

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
              LM+R      V+TYN +I    +  + ++A +++ +M   GI PN  TY+ I+  + 
Sbjct: 570 TLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYA 629

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            +G + +A   F K++ SG+++D  +Y+T++ A  + G +  A  +  E+     IPR T
Sbjct: 630 ASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF-QKIPRNT 688

Query: 371 AI-TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
            I  IL    AR G + EA  + +Q  + G   +I  +   I    +        +V E+
Sbjct: 689 FIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 748

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           M   G  P+      ++  + ++   + A   + EM+  G +  D+  +  L
Sbjct: 749 MVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG-LKPDEASYHCL 799



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 5/382 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + PS+ +Y  +L   ++  +   A  +  EM   GI  +  TYS LI  F     F
Sbjct: 435 KECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDF 494

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +A +  ++M +  +  D  +Y+ LIE   K+ +  +AI I  +++   + P   A+  +
Sbjct: 495 ANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPI 554

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I  +  A   K A   ++ MR  G  P  ++Y+ L++  V  HK   A+SV  +M+    
Sbjct: 555 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGI 614

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T  I++  Y        A   F  +++ G+   V  Y TLLR   ++     A+ 
Sbjct: 615 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 674

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           + R M  ++I +N   YN +I  + +  +  +A +LM++M+  G+ PN  TY++ I    
Sbjct: 675 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC 734

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           KAG + RA  + +++   G++ +   Y T+I  + RV L   A +   E++     P E 
Sbjct: 735 KAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEA 794

Query: 371 A-----ITILARAGRIEEATWV 387
           +      ++L+RA  +E +T+ 
Sbjct: 795 SYHCLVTSLLSRATVMEGSTYT 816



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 164/354 (46%), Gaps = 10/354 (2%)

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P    +  MI  + K      AR   E MR +G++P+   +++L++ Y        ALS 
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 354

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD------ADRLFWSMRKMGIDPSVVSYNTL 235
             EM      L + T +I+I  + +++ +        A+ L   M + GID  +  Y+++
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSM 414

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +  Y   +   + + +F  ++    + ++++Y  ++ +Y K  +  KA ++ +EM++ GI
Sbjct: 415 MHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGI 474

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
           + N  TYS +I  +        A  +F+++  SG++ D  +Y  +I A+ ++G +  A  
Sbjct: 475 KHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAIC 534

Query: 356 LLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           +L ++++    P   A    I   A AG ++ A         +G V  +  +  +I    
Sbjct: 535 ILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLV 594

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           R  K    + V +KM  AG  P+ H   +++  Y    +   A + +++++E G
Sbjct: 595 RKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 648



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/412 (20%), Positives = 186/412 (45%), Gaps = 14/412 (3%)

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           K  D   A + F  +++ GI P+   + ++++ +  A+  + A   +EEM+ +G++   V
Sbjct: 309 KRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIV 368

Query: 161 SYSTLLNLYVE--------NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           +YS L++ + +        N +  E L    E + ++ P+D+   + M+  Y  +     
Sbjct: 369 TYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVY--HSMMHGYTIIQNENK 426

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
              +F  +++ G  PS++SY  LL +Y +     +A+ + + M+   I+ N  TY+ +I 
Sbjct: 427 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 486

Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +    +   A  + +EM   G++P+   Y+ +I  + K G +DRA  + +K++   ++ 
Sbjct: 487 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 546

Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVF 388
               ++ +I  Y   G +  A   L  +R+   +P        I  L R  +++ A  V 
Sbjct: 547 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 606

Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
            +   AG   +   +  ++  ++ +       E F K++ +G   D +I   +L +  K 
Sbjct: 607 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 666

Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
              ++A  +  EM  +    +  ++  ++  +  R D    E L +++  D 
Sbjct: 667 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 718



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 133/288 (46%), Gaps = 15/288 (5%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
           +K+  +PS   +  ++  Y +      A   F  M+ + IE N   + +++  Y  + + 
Sbjct: 289 KKLLHEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 348

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGK------AGKLDRAAMLFQKLRSSGVEIDP 334
             A + ++EM++ G+E   +TYS +I+ + K      +G ++RA  L +++   G++   
Sbjct: 349 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPI 408

Query: 335 VLYQTMIVAY-----ERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFR 389
            +Y +M+  Y     E   LV   +RL     +P+ I     + +  + G++ +A  + +
Sbjct: 409 DVYHSMMHGYTIIQNENKCLVVF-ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK 467

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +    G   +   +  +I  F     +AN   +FE+M  +G  PD  I  L++ ++ K+ 
Sbjct: 468 EMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 527

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
             + A  +  +MQ+E    S++    ++  Y    D   ++S  + LD
Sbjct: 528 NMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD---MKSALDTLD 572



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/269 (19%), Positives = 118/269 (43%), Gaps = 25/269 (9%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +  MI  Y K  +   A    + M+ RGIEPNA  +++++  +  A  +  A    ++++
Sbjct: 300 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 359

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATW 386
           S G+E+  V Y  +I  + ++   +H                        ++G +E A  
Sbjct: 360 SEGLELTIVTYSILISGFAKIN-DSH------------------------QSGNMERAEE 394

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           + R+  + G    I V+  M+  ++  +     + VFE+++  G+ P       +LN Y 
Sbjct: 395 LVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYV 454

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
           K+ +   A  +  EM+  G   +++ +  +++ +    DF    ++FE +        + 
Sbjct: 455 KIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRA 514

Query: 507 LHHVVAGIYERANRLNDASRIMNRMNKRR 535
           +++++   + +   ++ A  I+ +M K R
Sbjct: 515 IYNLLIEAFCKMGNMDRAICILEKMQKER 543


>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
 gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 194/403 (48%), Gaps = 13/403 (3%)

Query: 3   VAILDWINEEA-------RYSPS----VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA 51
           +++L   N+EA       R  PS    V  YN ++    R  ++     L D MR+RG  
Sbjct: 227 LSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCK 286

Query: 52  PDRYTYSTLITCFGKEG--MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           PD  +++TLI    K G  M + AI  L ++ +  +  D + Y+ LI    + S+  +A 
Sbjct: 287 PDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAA 346

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +F  +++    PDL  YN MI+V+G+  L  +A  L  ++  +G  PD VSY++LL  +
Sbjct: 347 KVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAF 406

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
                  +   ++ EM ++    D  T N MI +YG+    + A +L+  M+  G +P  
Sbjct: 407 AREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDA 466

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
           V+Y  L+   G+     EA  +   M    ++  + TY+ +I  Y K+ +  +A      
Sbjct: 467 VTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDC 526

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   GI P+ + YS ++ I  +  +  RA  L++++   G+ +D  LY+ M+    +V  
Sbjct: 527 MLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNK 586

Query: 350 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           V    R++ ++ +   +  +T  +IL +    +EA  + R+A 
Sbjct: 587 VEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAI 629



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 182/391 (46%), Gaps = 38/391 (9%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           + S ++ +  K +  + A+ +F R + S     +  YN M+ V+ +   F + + L++ M
Sbjct: 222 MLSTILSVLGKANQEALAVEVFMRAEPSA-GNTVQVYNAMMGVYARRGRFNKVQELLDLM 280

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
           RE+G KPD VS++TL+N  ++    +  L++   +NEV                      
Sbjct: 281 RERGCKPDLVSFNTLINARLKAGAMMPNLAI-ELLNEV---------------------- 317

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
                     R+ G+ P  ++YNTL+     A    EA  +F  M+    + ++ TYN M
Sbjct: 318 ----------RRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAM 367

Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
           I +YG+     KA  L  ++++RG  P+A++Y++++  + + G +++   +++++   G 
Sbjct: 368 ISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGF 427

Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATW 386
             D + Y TMI  Y + G    A +L  ++    R P+ +     I  L +  +I EA  
Sbjct: 428 GKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAG 487

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
           V  +  + G    +  +  +I  +++  K     E F+ M  +G  PD    +++L+ + 
Sbjct: 488 VMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHL 547

Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           +  E + A  LY EM  +G      ++  ML
Sbjct: 548 RFNEPKRAMTLYKEMLHDGITLDHSLYELML 578



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 177/404 (43%), Gaps = 39/404 (9%)

Query: 31   RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLV 90
            R K W+ A  +   +RQR I  DR  ++ LI  +   G ++ A +    M +D  S  + 
Sbjct: 790  RLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVD 849

Query: 91   LYSNLIE-------------LARKLSDYSKAIS----------------------IFSRL 115
              + L++             + ++L D    IS                      I+  +
Sbjct: 850  TINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGM 909

Query: 116  KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            K++G  P +  Y  M  +  + K  ++   ++ EM E G KPD   ++++L +YV    F
Sbjct: 910  KAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDF 969

Query: 176  VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             + + V+  + E     D  T N +I +Y +    ++   L   MR  G++P + +Y +L
Sbjct: 970  RKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSL 1029

Query: 236  LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
            +  +G+ +L  +A  LF  +Q K  + +   Y+TM+KIY  S  H KA  L   M++ G+
Sbjct: 1030 VASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGV 1089

Query: 296  EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            EP   T   ++  +G +G+   A  +   L+ +G  +  + Y ++I AY R G      +
Sbjct: 1090 EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQ 1149

Query: 356  LLHELRQPNTIPRETAITILARAG----RIEEATWVFRQAFDAG 395
             L ++++    P     T   RA     R  EA  +     DAG
Sbjct: 1150 KLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAG 1193



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/555 (21%), Positives = 239/555 (43%), Gaps = 42/555 (7%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P    Y V++ ++ +  +   A G+  EM   G+ P   TYS LI  + K G    A  
Sbjct: 463  NPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEE 522

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                M +  +  D + YS ++++  + ++  +A++++  +   GI  D   Y  M+    
Sbjct: 523  TFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLR 582

Query: 136  KAKLFKEARLLIEEMRE-QGVKPDTVSY-----------STLLNLYVENH---------- 173
            K    ++   +I +M E  G+   T+S            + +L   + +H          
Sbjct: 583  KVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAISDHFEIDRENLLS 642

Query: 174  ---------KFVEALSVF---AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
                     +  EAL +     E +  +  +      +M+    QLD A    + + + R
Sbjct: 643  ILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAAL---KEYSNNR 699

Query: 222  KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            ++G   S   + +L++   E EL  EA  +F  M+   I+ +   Y +M+ +Y K    E
Sbjct: 700  ELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPE 759

Query: 282  KATNLMQEMQNRGIEPNAIT-YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
             A +L+   ++ GI  N I+ Y  +I  +G+     +A  +   LR   + +D  ++  +
Sbjct: 760  TAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNAL 819

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAGE 396
            I AY   G    A+ + + + +    P    I  L +A    GR++E   V ++  D G 
Sbjct: 820  IEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGF 879

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
                S    M++ F+R      V +++  M++AGYFP  H+  ++     + ++    + 
Sbjct: 880  KISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEA 939

Query: 457  LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYE 516
            + SEM+E G      +   +L +Y A +DF     +++R+  D     ++ ++ +  +Y 
Sbjct: 940  MLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYC 999

Query: 517  RANRLNDASRIMNRM 531
            R +R  +   +M+ M
Sbjct: 1000 RDHRPEEGFSLMHEM 1014



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 141/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            ++  M+  G  P  + Y  +     +        + L +ME+     DL ++++++++  
Sbjct: 905  IYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYV 964

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + D+ K I ++ R+K  G+ PD   YNT+I ++ +    +E   L+ EMR  G++P   
Sbjct: 965  AIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLD 1024

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +L+  + +     +A  +F E+    C LD +  + M+ +Y        A+RLF  M
Sbjct: 1025 TYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMM 1084

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +  G++P++ + + L+  YG +    EA  +   ++      + + Y+++I  Y ++ ++
Sbjct: 1085 KDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDY 1144

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                  + +M+  G+EP+   ++  I     + +   A +L   L+ +G ++
Sbjct: 1145 NIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGFDL 1196



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/551 (19%), Positives = 222/551 (40%), Gaps = 36/551 (6%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY+V+L   LR  + + A  L+ EM   GI  D   Y  ++    K    +     
Sbjct: 534  PDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRV 593

Query: 77   LQQMEQDRVSGDLVLYSNLIE----------LARKLSDY--------------------- 105
            ++ ME+        + S L++          L R +SD+                     
Sbjct: 594  IRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRH 653

Query: 106  SKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTL 165
            ++A+ +   LK        +    ++ +  KA+    A       RE G       + +L
Sbjct: 654  AEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESL 713

Query: 166  LNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
            +   +EN    EA  VF++M         +    M+ +Y ++   + A  L       GI
Sbjct: 714  IQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGI 773

Query: 226  DPSVVS-YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
              + +S Y  ++  YG  +L+ +A  +   ++++ I  +   +N +I+ Y  S  +E+A 
Sbjct: 774  LLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERAR 833

Query: 285  NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
             +   M   G  P   T + ++      G+LD   ++ Q+L+  G +I       M+ A+
Sbjct: 834  AIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAF 893

Query: 345  ERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
             R G +   K++ H ++     P          +L+R  ++ +   +  +  +AG   D+
Sbjct: 894  ARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDL 953

Query: 401  SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            S++  +++++   + +   I+V+++++  G  PD      ++  Y +    E    L  E
Sbjct: 954  SIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHE 1013

Query: 461  MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
            M+  G       +  +++ +G ++     E LFE L S      +  +H +  IY  +  
Sbjct: 1014 MRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGS 1073

Query: 521  LNDASRIMNRM 531
             + A R+ + M
Sbjct: 1074 HSKAERLFSMM 1084



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/497 (18%), Positives = 200/497 (40%), Gaps = 70/497 (14%)

Query: 10   NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
            N E  ++ S   +  +++  L  +    A  +F +MR  GI      Y +++  + K G 
Sbjct: 698  NRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGF 757

Query: 70   FDSAISWLQQMEQDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
             ++A   +   E D +   ++ LY N+IE   +L  + KA S+   L+   I  D   +N
Sbjct: 758  PETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWN 817

Query: 129  TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
             +I  +  +  ++ AR +   M   G  P   + + LL   + + +  E   V  E+ ++
Sbjct: 818  ALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDM 877

Query: 189  NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               +  ++  +M+D + +     +  +++  M+  G  P+                    
Sbjct: 878  GFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPT-------------------- 917

Query: 249  IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +HL+R+M R             +   GK +   +A  ++ EM+  G +P+   +++++ +
Sbjct: 918  MHLYRVMAR-------------LLSRGKQVRDVEA--MLSEMEEAGFKPDLSIWNSVLKM 962

Query: 309  WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR 368
            +       +   ++Q+++  G+E D   Y T+IV Y R         L+HE+R     P+
Sbjct: 963  YVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPK 1022

Query: 369  ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
                                           +  +  ++  F + +      E+FE+++S
Sbjct: 1023 -------------------------------LDTYKSLVASFGKQQLVEQAEELFEELQS 1051

Query: 429  AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLSLYGARKDFN 487
             G   D      ++  Y        A+ L+S M++ G   +   +H  M+S YG+     
Sbjct: 1052 KGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVS-YGSSGQPQ 1110

Query: 488  MLESLFERL-DSDSNIN 503
              E +   L ++ SN++
Sbjct: 1111 EAEKVLSNLKETGSNLS 1127



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 146/322 (45%), Gaps = 19/322 (5%)

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ-RKEIEQNVVTYNTMIKIYGKSLE 279
           RK+ + P+ + +  +++  G+ E +  A+ ++  +  R     N    +T++ + GK+ +
Sbjct: 179 RKVQMTPTDLCF--VVKSVGQ-ESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQ 235

Query: 280 HEKATNLMQEMQNRGIEPNA----ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
              A  +         EP+A      Y+ ++ ++ + G+ ++   L   +R  G + D V
Sbjct: 236 EALAVEVFMR-----AEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLV 290

Query: 336 LYQTMIVAYERVGLVAH--AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFR 389
            + T+I A  + G +    A  LL+E+R+    P+TI   T I+  +RA  +EEA  VF 
Sbjct: 291 SFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFD 350

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
                    D+  +  MI ++ R        ++F  + S G+FPD+     +L ++ +  
Sbjct: 351 DMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREG 410

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             E   +++ EM + G    +  +  M+ +YG +    +   L+  + S         + 
Sbjct: 411 NVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYT 470

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           V+     + N++ +A+ +M+ M
Sbjct: 471 VLIDSLGKTNKIAEAAGVMSEM 492


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 215/489 (43%), Gaps = 41/489 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   Y  ++      +  E A     +M++ GI     TYS L++ F K G  +SA  W
Sbjct: 344 PSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHW 403

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            Q+ ++   S + ++Y N+I    +  +  KA ++   ++  GI   +  Y+TM++ +  
Sbjct: 404 FQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM 463

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +  L+ E  +E G+ P  ++Y  L+NLY +  K  +AL V  EM       ++ T
Sbjct: 464 VGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT 523

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY-GEAEL----------- 244
            +++I+ + +L    +A  +F  + K GI P VV YN ++  + G  ++           
Sbjct: 524 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 583

Query: 245 -----------------------FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
                                    +A+ +F +M+       V TYN +I    +  + E
Sbjct: 584 KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 643

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           KA  ++ EM   G+ PN  TY+TI+  +   G   +A   F KLR  G+++D   Y+ ++
Sbjct: 644 KAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALL 703

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAI-TIL----ARAGRIEEATWVFRQAFDAGE 396
            A  + G +  A  +  E+   N IPR T I  IL    AR G I EA  + +Q    G 
Sbjct: 704 KACCKSGRMQSALAVTKEMSAQN-IPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGV 762

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             DI  +   I   S+        +  E+M+S G  P+      ++N + +    E A  
Sbjct: 763 QPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALS 822

Query: 457 LYSEMQEEG 465
            + EM+  G
Sbjct: 823 CFEEMKLSG 831



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 5/377 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           +F+  ++ G+ P   TY  LI  + K G    A+   ++ME   +  ++  YS LI    
Sbjct: 473 VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 532

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
           KL D++ A +IF  L   GI PD+V YN +I  F        A   ++EM++Q  KP T 
Sbjct: 533 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR 592

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           ++  +++ +    +  +AL VF  M    C   + T N +I    +    + A+++   M
Sbjct: 593 TFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM 652

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G+ P+  +Y T++  Y      G+A   F  ++ + ++ +V TY  ++K   KS   
Sbjct: 653 TLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRM 712

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           + A  + +EM  + I  N   Y+ +I  W + G +  AA L Q+++  GV+ D   Y + 
Sbjct: 713 QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSF 772

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
           I A  + G +  A + + E++    +PN     T I   ARA   E+A   F +   +G 
Sbjct: 773 INACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGL 832

Query: 397 VKDISVFGC-MIELFSR 412
             D +V+ C M  L SR
Sbjct: 833 KPDRAVYHCLMTSLLSR 849



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 173/343 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A    ++  Y++++   L+ K W  A  +F+++ + GI PD   Y+ +IT F   G  
Sbjct: 513 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKM 572

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+  +++M++ R       +  +I    +  +  KA+ +F  ++ SG +P +  YN +
Sbjct: 573 DRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL 632

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    + +  ++A  +++EM   GV P+  +Y+T+++ Y       +A + F ++ +   
Sbjct: 633 ILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGL 692

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD+ T   ++    +    + A  +   M    I  +   YN L+  +       EA  
Sbjct: 693 QLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAAD 752

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L + M+R+ ++ ++ TY + I    K+ + ++AT  ++EM++ G++PN  TY+T+I  W 
Sbjct: 753 LMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWA 812

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           +A   ++A   F++++ SG++ D  +Y  ++ +      VAH 
Sbjct: 813 RASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHG 855



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 181/398 (45%), Gaps = 10/398 (2%)

Query: 104 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
           ++   +S F R+K     P    Y  M+N + +      AR   E+MR +G++P +  Y+
Sbjct: 295 NWQAVVSAFERIKK----PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
            L++ Y       EALS   +M E    + L T +I++  + +   A+ AD  F   ++ 
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK 410

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
               + + Y  ++  Y +     +A  L R M+ + I+  +  Y+TM+  Y    + +K 
Sbjct: 411 HSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKC 470

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
             + +  +  G+ P+ ITY  +I ++ K GK+ +A  + +++  +G++ +   Y  +I  
Sbjct: 471 LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING 530

Query: 344 YERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + ++   A+A    + L+ +  +P+ +     IT     G+++ A    ++         
Sbjct: 531 FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPT 590

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETADDLY 458
              F  +I  F+R  +    ++VF+ MR +G  P  H   AL+L    K R+ E A+ + 
Sbjct: 591 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEK-RKMEKAEQIL 649

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
            EM   G   ++  +  ++  Y +  D     + F +L
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKL 687



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/273 (19%), Positives = 119/273 (43%), Gaps = 4/273 (1%)

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y  M+  Y +  +  +A    ++M+ RGIEP++  Y+ +I  +     ++ A    +K++
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIE 382
             G+E+  V Y  ++  + + G    A     E ++     N I     I    +   ++
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  + R+  + G    I ++  M++ ++        + VFE+ +  G  P       ++
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
           N Y KL +   A ++  EM+  G   + + +  +++ +   KD+    ++FE L  D   
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
               L++ +   +    +++ A   +  M K+R
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR 586


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 212/478 (44%), Gaps = 60/478 (12%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P    Y+ VL  +  A + ELA  LF+EM++ G+  D YTY+ ++  F K G+ + A 
Sbjct: 479 FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 75  SWLQQMEQDRVSGDLVLYSNLIEL---ARKLS-------------------DYS------ 106
            W  +M +   + ++V Y+ LI     A+K+S                    YS      
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 107 -------KAISIFSRLKSSGIVPDL-----------------VAYNTMINVFGKAKLFKE 142
                  KA  IF R+  S  VPD+                 V Y  +++ F K    +E
Sbjct: 599 CKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEE 658

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           AR L++ M  +G +P+ + Y  L++   +  K  EA  V AEM+E   P  L T + +ID
Sbjct: 659 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLID 718

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
            Y ++     A ++   M +    P+VV Y  ++    +     EA  L ++M+ K  + 
Sbjct: 719 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 778

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           NVVTY  MI  +G+  + E    L++ M ++G+ PN +TY  +I    K G LD A  L 
Sbjct: 779 NVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 838

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RA 378
           ++++ +        Y+ +I  + +  +   +  LL E+ Q +T P  +   +L     +A
Sbjct: 839 EEMKQTHWPTHAAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896

Query: 379 GRIEEATWVFRQ--AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
            R+E A  +  +   F A  V   S +  +IE      K      +F +M   G  P+
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPE 954



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 231/545 (42%), Gaps = 47/545 (8%)

Query: 15  YSPSVFAYNVVL------RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           ++P    YN+++      ++ L     ELA   + EM   G+  ++   S+   C    G
Sbjct: 403 HTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAG 462

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
            ++ A S +++M       D   YS ++      S    A  +F  +K  G+V D+  Y 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
            M++ F KA L ++AR    EMRE G  P+ V+Y+ L++ Y++  K   A  +F  M   
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
            C  ++ T + +ID + +    + A ++F  M      P V  Y                
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY---------------- 626

Query: 249 IHLFRLMQRKEIEQ-NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
              F+       E+ NVV Y  ++  + K    E+A  L+  M   G EPN I Y  +I 
Sbjct: 627 ---FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALID 683

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
              K GKLD A  +  ++   G       Y ++I  Y +V     A ++L ++ +    P
Sbjct: 684 GLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 743

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           N +     I  L + G+ +EA  + +   + G   ++  +  MI+ F R  K    +E+ 
Sbjct: 744 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELL 803

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS----- 478
           E+M S G  P+     ++++   K    + A +L  EM+        Q H+   +     
Sbjct: 804 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK--------QTHWPTHAAGYRK 855

Query: 479 -LYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
            + G  K+F     L + +  D       L+ ++     +A RL  A R++  +    TF
Sbjct: 856 VIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV---ATF 912

Query: 538 NSSLV 542
           +++LV
Sbjct: 913 SATLV 917



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 201/473 (42%), Gaps = 34/473 (7%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
           NV++R   R+  + +A      ++     P R TY+ LI  F K    DSA    ++M  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 83  DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
             +  D            K+  + +A+++   +++   VPD V Y  +I+   +A LF+E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEE 320

Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
           A   +  MR     P+ V+YSTLL   +   +      V   M    C       N ++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQRKEIE 261
            Y        A +L   M K G  P  V YN L+  + G+ +    + HL  L ++   E
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSL--SCHLLELAEKAYSE 438

Query: 262 Q-------NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
                   N +  ++  +    + ++EKA ++++EM  +G  P+  TYS ++     A K
Sbjct: 439 MLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASK 498

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
           ++ A +LF++++  G+  D   Y  M+ ++ + GL+  A++  +E+R+    PN +    
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            I    +A ++  A  +F      G + +I  +  +I+   +  +     ++FE+M  + 
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618

Query: 431 YFPDSH-----------------IIALVLNSYGKLREFETADDLYSEMQEEGC 466
             PD                   I   +L+ + KL   E A  L   M  EGC
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGC 671



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 149/346 (43%), Gaps = 10/346 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  +L    +  + E A  L D M   G  P++  Y  LI    K G  D A   
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +      L  YS+LI+   K+     A  + S++  +   P++V Y  MI+   K
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L++ M E+G +P+ V+Y+ +++ +    K    L +   M       +  T
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 197 CNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             ++ID     G LD+A +   L   M++         Y  ++  + +   F E++ L  
Sbjct: 818 YRVLIDHCCKNGALDVAHN---LLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLD 872

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ--NRGIEPNAITYSTIIAIWGK 311
            + + +    +  Y  ++    K+   E A  L++E+   +  +   + TY+++I     
Sbjct: 873 EIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCL 932

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
           A K+D+A  LF ++   GV  +   + ++I    R   ++ A  LL
Sbjct: 933 ANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 35/311 (11%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +  +++ Y+ ++    + K+ +LA  +  +M +   AP+   Y+ +I    K G  D
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   +Q ME+     ++V Y+ +I+   ++      + +  R+ S G+ P+ V Y  +I
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI 822

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   K      A  L+EEM++         Y  ++  +  N +F+E+L +  E+ + +  
Sbjct: 823 DHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 880

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L+   +++D     ++ K A RL  ++R +     V +++  L  Y            
Sbjct: 881 PFLSLYRLLVD-----NLIK-AQRLEMALRLL---EEVATFSATLVDYSS---------- 921

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
                         TYN++I+    + + +KA  L  EM  +G+ P   T+ ++I    +
Sbjct: 922 --------------TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFR 967

Query: 312 AGKLDRAAMLF 322
             K+  A +L 
Sbjct: 968 NSKISEALLLL 978



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 4/179 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+   Y V++ +  +    ++AH L +EM+Q         Y  +I  F KE  F  ++ 
Sbjct: 812 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLG 869

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK--SSGIVPDLVAYNTMINV 133
            L ++ QD  +  L LY  L++   K      A+ +   +   S+ +V     YN++I  
Sbjct: 870 LLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 929

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              A    +A  L  EM ++GV P+  ++ +L+     N K  EAL +   ++ + CPL
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVCPL 988


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 209/453 (46%), Gaps = 4/453 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P   +YN +L  + +  +   A  L  +M+  G+ P+R T++ L++ + K G    A   
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  M Q+ V  D+  Y+ LI    K     +A  +   +++  ++PD+V YNT+IN    
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +   LI++M  +GVKP+ V+Y+ ++  YV+  K   A +   +M E     D  T
Sbjct: 365 CSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 424

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I+ Y +     +A R+   M + G+  + V+ NT+L          +A  L     
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++    + V+Y T+I  Y K  +  +A  L  EM+ + I P+ ITY+T+I     +GK D
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           ++     +L  SG+  D   Y T+I+ Y R G V  A +  +++ + +  P      IL 
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 377 RA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           R     G +++A  +F      G+  D   +  +I    +  ++    ++  +M      
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           PD +    +L++       + A++  S + E+G
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 189/425 (44%), Gaps = 39/425 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   +N+++    +    + A  + D M Q  + PD +TY+ LI    K+G  D A   
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +ME  ++  D+V Y+ LI      S   K   +  +++  G+ P+ V YN ++  + K
Sbjct: 340 KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + +M E G  PD V+++TL+N Y +  +  EA  +  EM+     ++  T
Sbjct: 400 EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++          DA +L  S  K G     VSY TL+  Y +     EA+ L+  M+
Sbjct: 460 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK-- 314
            KEI  +++TYNTMI     S + +++ + + E+   G+ P+  TY+TII  + + G+  
Sbjct: 520 EKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVE 579

Query: 315 ---------------------------------LDRAAMLFQKLRSSGVEIDPVLYQTMI 341
                                            LD+A  LF    S G  ID V Y T+I
Sbjct: 580 KAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTII 639

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               +      A  LL E+ +    P+       ++ LA AGR++EA     +  + G++
Sbjct: 640 SGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKL 699

Query: 398 KDISV 402
           +D ++
Sbjct: 700 QDQTI 704



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 199/433 (45%), Gaps = 7/433 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWE---LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           P++   N ++  ++R        L+  +F ++ + G+  +  T++ LI     E     A
Sbjct: 172 PNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEA 231

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
           I  + +M+      D V Y+ ++++  K    ++A  +   +K++G++P+   +N +++ 
Sbjct: 232 IGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSG 291

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K    KEA  +I+ M +  V PD  +Y+ L+    ++ K  EA  +  EM  +    D
Sbjct: 292 YCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPD 351

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +I+       +     L   M   G+ P+ V+YN +++ Y +      A +  R
Sbjct: 352 VVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 411

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+      + VT+NT+I  Y K+    +A  +M EM  +G++ N++T +TI+       
Sbjct: 412 KMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 471

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
           KLD A  L       G  +D V Y T+I+ Y + G    A +L  E+++   IP      
Sbjct: 472 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYN 531

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I  L  +G+ +++     +  ++G V D + +  +I  + R  +     +   KM   
Sbjct: 532 TMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK 591

Query: 430 GYFPDSHIIALVL 442
            + PD     ++L
Sbjct: 592 SFKPDLFTCNILL 604



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%), Gaps = 42/368 (11%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMIN----------VFGKAKLF----------------- 140
           A  IF+R+K   + P+L+  NT+IN          V+    +F                 
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 141 -----------KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
                       EA  LI +M++    PD VSY+T+L++  +  K  EA  +  +M    
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +  T NI++  Y +L   K+A ++   M +  + P V +YN L+    +     EA 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+  ++  +VVTYNT+I          K   L+ +M+ +G++PNA+TY+ ++  +
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY 397

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NT 365
            K GK+D A    +K+  SG   D V + T+I  Y + G ++ A R++ E+ +     N+
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   T +  L    ++++A  +   A   G   D   +G +I  + ++ K    ++++++
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 426 MRSAGYFP 433
           M+     P
Sbjct: 518 MKEKEIIP 525


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 194/407 (47%), Gaps = 43/407 (10%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R +A+L    EE   SP+V  Y  ++    +     LA  LF +M + G+ P+++TYS L
Sbjct: 179 RLLAVL----EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVL 234

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           +  F K+G        LQ+                           +   ++  +  SGI
Sbjct: 235 MNGFFKQG--------LQR---------------------------EGFQMYENMNRSGI 259

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           VP+  AYN +I+ +    +  +A  +  EMRE+G+    ++Y+ L+       KF EA+ 
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  ++N+V    ++ T NI+I+ +  +     A RLF  ++  G+ P++V+YNTL+  Y 
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + E    A+ L + M+ + I ++ VTY  +I  + +    +KA  +   M+  G+ P+  
Sbjct: 380 KVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVY 439

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           TYS +I      G +  A+  F+ L    ++ + V+Y TMI  Y + G    A RLL+E+
Sbjct: 440 TYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499

Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
                 PN     + + +L R  + +EA  +  Q  ++G    +S++
Sbjct: 500 VHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 152/322 (47%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+V++    +         +++ M + GI P+ Y Y+ LI+ +  +GM D A   
Sbjct: 226 PNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +  ++  ++ Y+ LI    +   + +A+ +  ++   G+ P++V YN +IN F  
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L  +++  G+ P  V+Y+TL+  Y +      AL +  EM E        T
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT 405

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             I+ID + +L+    A  +   M K G+ P V +Y+ L+          EA   F+ + 
Sbjct: 406 YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLG 465

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              ++ N V YNTMI  Y K     +A  L+ EM + G+ PN  ++ + + +  +  K  
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWK 525

Query: 317 RAAMLFQKLRSSGVEIDPVLYQ 338
            A +L  ++ +SG++    LY+
Sbjct: 526 EAELLLGQMINSGLKPSVSLYK 547



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 198/415 (47%), Gaps = 5/415 (1%)

Query: 57  YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK 116
           Y  ++  +      D A+++L  M  +  +     ++NL+ L  + + + KA  IF+ LK
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           S  +V +  ++  MI    +A  F     L+  + E G+ P+ V Y+TL++   +N   +
Sbjct: 152 SK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
            A ++F +M+ +    +  T +++++ + +  + ++  +++ +M + GI P+  +YN L+
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
             Y    +  +A  +F  M+ K I   V+TYN +I    +  +  +A  L+ ++   G+ 
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN +TY+ +I  +   GK+D A  LF +L+SSG+    V Y T+I  Y +V  +A A  L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 357 LHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSR 412
           + E+ +      +   TIL    AR    ++A  +      +G V D+  +  +I     
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 413 NKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           N       + F+ +      P+S I   +++ Y K      A  L +EM   G V
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 151/296 (51%), Gaps = 4/296 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEGMFDSAI 74
           P+ +AYN ++         + A  +F EMR++GIA    TY+ LI   C GK+  F  A+
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK--FGEAV 318

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + ++ +  +S ++V Y+ LI     +     A+ +F++LKSSG+ P LV YNT+I  +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +    A  L++EM E+ +    V+Y+ L++ +   +   +A  + + M +     D+
Sbjct: 379 SKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDV 438

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T +++I         K+A + F S+ +M + P+ V YNT++  Y +      A+ L   
Sbjct: 439 YTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           M    +  NV ++ + + +  +  + ++A  L+ +M N G++P+   Y  +  + G
Sbjct: 499 MVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP++  YN+++       + + A  LF++++  G++P   TY+TLI  + K      A+ 
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +++ME+  ++   V Y+ LI+   +L+   KA  + S ++ SG+VPD+  Y+ +I+   
Sbjct: 390 LVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXC 449

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLDL 194
                KEA    + + E  ++P++V Y+T+++ Y +      AL +  EM +    P   
Sbjct: 450 VNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           + C+ M  +  + +  K+A+ L   M   G+ PSV  Y  + +V G+
Sbjct: 510 SFCSTM-GLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKGD 555


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 229/514 (44%), Gaps = 42/514 (8%)

Query: 5   ILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           + D++NE +   +  S+++ N +L  + + +  E A  L+ +M   GI P   T++TLI 
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
              K+G    A   L Q+ Q  +S D+  Y++LI    +  +   A  +F R+   G  P
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           + V Y+T+IN         EA  ++EEM E+G++P   +Y+  +          EA+ + 
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           A M +  C  ++ T   +I    +L   + A  L+  M K G+ P+ V+YN L+      
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 243 ELFGEAIHLFRLMQRK--------------------EIEQ---------------NVVTY 267
             F  A+ +F  M+                      +IE+                VVTY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           NT+I  Y        A  L+  M+  G EP+  TY+ +++ + K GKL+ A+  FQ++  
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEE 383
            G+  +PV Y  +I  + + G V  A  LL  + +    PN       I  L++  R  E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +  +  + G + ++  +  +I+   RN +     ++F  M      P+ +  + ++ 
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              +  + + A+ L  EM+ +G +  D+V F  L
Sbjct: 627 GLCQEGKADEAEILLKEMERKG-LAPDEVTFTSL 659



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 2/363 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y  ++  + R  + E+A GL+ +M + G+ P+  TY+ LI      G F +A+  
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF-G 135
              ME      +   Y+ +I+      D  KA+ +F ++   G +P +V YNT+IN +  
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  +   ARLL + M+E G +PD  +Y+ L++ + +  K   A   F EM E     +  
Sbjct: 456 KGNVNNAARLL-DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           +   +ID + +      A  L   M +MG +P+V SYN ++    +   F EA  +   M
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  NV+TY T+I    ++   + A  +  +M+ R   PN  TYS++I    + GK 
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A +L +++   G+  D V + ++I  +  +G + HA  LL  +      P     ++L
Sbjct: 635 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVL 694

Query: 376 ARA 378
            + 
Sbjct: 695 LKG 697



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 185/454 (40%), Gaps = 74/454 (16%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP VF Y  ++    R +  +LA G+FD M + G  P+  TYSTLI     EG  D A+ 
Sbjct: 230 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289

Query: 76  WLQQMEQDRVSG-----------------------------------DLVLYSNLIELAR 100
            L++M +  +                                     ++  Y+ LI    
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN---VFGK----AKLF------------- 140
           +L     AI ++ ++   G+VP+ V YN +IN   V G+     K+F             
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 141 ---------------KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
                          ++A +L E+M + G  P  V+Y+TL+N Y+       A  +   M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E  C  D  T N ++  + +    + A   F  M + G++P+ VSY  L+  + +    
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             A+ L + M+      NV +YN +I    K     +A  +  +M  +G+ PN ITY+T+
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I    + G+   A  +F  +       +   Y ++I    + G    A+ LL E+ +   
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649

Query: 366 IPRETAITILARA----GRIEEATWVFRQAFDAG 395
            P E   T L       GRI+ A  + R+  D G
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 219/480 (45%), Gaps = 20/480 (4%)

Query: 64  FGKEGMFDSAISWLQQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           F K  M +  IS L ++ +DRV    D +    +I+  R   +  +     + +   G  
Sbjct: 103 FYKHNM-NCFISMLNRLVRDRVFAPADHIRIL-MIKACRNEEEIRRVADFLNEISGMGFG 160

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
             L + NT++    K ++ + AR L ++M   G++P  ++++TL+N+  +  K  EA  +
Sbjct: 161 FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
            +++ + +   D+ T   +I  + +   LD+A     +F  M K G DP+ V+Y+TL+  
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG---VFDRMVKEGCDPNSVTYSTLING 277

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
                   EA+ +   M  K IE  V TY   I         E+A  L+  M+ RG  PN
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
             TY+ +I+   + GKL+ A  L+ K+   G+  + V Y  +I      G  + A ++ H
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 359 ELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
            +       NT      I  L   G IE+A  +F +    G +  +  +  +I  +    
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF 474
              N   + + M+  G  PD      +++ + K  + E+A   + EM E G +  + V +
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG-LNPNPVSY 516

Query: 475 QMLSLYGARKD--FNMLESLFERLDS-DSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             L + G  KD   ++  SL +R++    N N +  + V+ G+  + NR ++A +I ++M
Sbjct: 517 TAL-IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL-SKENRFSEAEKICDKM 574



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE   +P+V +YN V+  + +  ++  A  + D+M ++G+ P+  TY+TLI    + G  
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A      ME+ +   +L  YS+LI    +     +A  +   ++  G+ PD V + ++
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           I+ F        A LL+  M + G KP+  +YS LL
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 15/158 (9%)

Query: 4   AILDWINEEARYS---------------PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR 48
           A+++ +++E R+S               P+V  Y  ++  + R  + + A  +F +M +R
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
              P+ YTYS+LI    +EG  D A   L++ME+  ++ D V +++LI+    L     A
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
             +  R+   G  P+   Y+ ++    K  L  E ++ 
Sbjct: 673 FLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIF 710


>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
          Length = 701

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 192/371 (51%), Gaps = 16/371 (4%)

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFS----RLKSSGIVPDLVAYNTMINVFGKAKL 139
           R  GD +L  + + +   +++   A+  F     RLK S    +++ YN  + VF K + 
Sbjct: 135 RCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSR---EVILYNVTLKVFRKCRN 191

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
              A  L +EM E+GVKPD +++ST+++    +    +A+  F +M E  C  D  T + 
Sbjct: 192 LDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSA 251

Query: 200 MIDVYGQLDMAKDADRLFWSMR--KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           MID YG+      A +L+   R  K  IDP  V+++TL+R+YG +  F   ++++  M+ 
Sbjct: 252 MIDAYGRAGNVDMALKLYDRARTEKWRIDP--VTFSTLIRIYGMSGNFDGCLNVYEEMKA 309

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             ++ N+V YNT++   G++    +A N+ +EM N G++ +  TY+ ++  +G+A   + 
Sbjct: 310 LGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAED 369

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAI 372
           A +++++++  G+E+  VLY T++     VG    A  +  +++      P++    + I
Sbjct: 370 ALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLI 429

Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
           TI + +G++ EA  +     +AG   +I V   +I+ + +  +   V+  F+++      
Sbjct: 430 TIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDIT 489

Query: 433 PDSHIIALVLN 443
           PD      +LN
Sbjct: 490 PDDRFCGCMLN 500



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 3/315 (0%)

Query: 14  RYSPS--VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           R  PS  V  YNV L+   + +  + A  LFDEM +RG+ PD  T+ST+I+C     + +
Sbjct: 169 RLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPN 228

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+ W ++M +     D V YS +I+   +  +   A+ ++ R ++     D V ++T+I
Sbjct: 229 KAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLI 288

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            ++G +  F     + EEM+  GVKP+ V Y+TLL+      +  +A +++ EM      
Sbjct: 289 RIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQ 348

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
           L   T   ++  YG+   A+DA  ++  M++ G++ SVV YNTLL +  +     EA  +
Sbjct: 349 LSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAI 408

Query: 252 FRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           F  M+       +  T++++I IY  S +  +A  ++  M   G EPN    +++I  +G
Sbjct: 409 FEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYG 468

Query: 311 KAGKLDRAAMLFQKL 325
           KA + D     F +L
Sbjct: 469 KANRTDEVVRTFDRL 483



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 169/337 (50%), Gaps = 5/337 (1%)

Query: 84  RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEA 143
           + S +++LY+  +++ RK  +   A  +F  +   G+ PD + ++T+I+    + L  +A
Sbjct: 171 KPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKA 230

Query: 144 RLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
               E+M E G  PD V+YS +++ Y        AL ++         +D  T + +I +
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           YG          ++  M+ +G+ P++V YNTLL   G A+   +A ++++ M    ++ +
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLS 350

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
             TY  +++ YG++   E A  + +EM+ +G+E + + Y+T++A+    G  + AA +F+
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410

Query: 324 KLRSSG-VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
            ++SSG    D   + ++I  Y   G V+ A+ +L+ +     +PN     + I    +A
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
            R +E    F +  +     D    GCM+ + +++ K
Sbjct: 471 NRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPK 507



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 7/289 (2%)

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A   FR  +R +  + V+ YN  +K++ K    + A  L  EM  RG++P+ IT+STII+
Sbjct: 162 AFGFFR--KRLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIIS 219

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP---- 363
               +   ++A   F+K+   G   D V Y  MI AY R G V  A +L    R      
Sbjct: 220 CARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRI 279

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + +   T I I   +G  +    V+ +    G   ++ ++  +++   R K+      ++
Sbjct: 280 DPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIY 339

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           ++M + G        A +L +YG+ R  E A  +Y EM+E+G   S  ++  +L++    
Sbjct: 340 KEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADV 399

Query: 484 KDFNMLESLFERLDSDSNINKKE-LHHVVAGIYERANRLNDASRIMNRM 531
                  ++FE + S  N          +  IY  + ++++A  ++N M
Sbjct: 400 GYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAM 448



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 140/304 (46%), Gaps = 5/304 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N+ + V+ +      A++LF  M + G+ P  ++++T++     + L  +A+  F  M  
Sbjct: 180 NVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPE 239

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                + VTY+ MI  YG++   + A  L    +      + +T+ST+I I+G +G  D 
Sbjct: 240 FGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDG 299

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN-TIPRETAITILA 376
              +++++++ GV+ + V+Y T++ A  R      AK +  E+      +   T   +L 
Sbjct: 300 CLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLR 359

Query: 377 RAGRI---EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG-YF 432
             GR    E+A  V+++  + G    + ++  ++ + +          +FE M+S+G   
Sbjct: 360 AYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCM 419

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           PDS   + ++  Y    +   A+ + + M E G   +  V   ++  YG     + +   
Sbjct: 420 PDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRT 479

Query: 493 FERL 496
           F+RL
Sbjct: 480 FDRL 483



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 5/201 (2%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG-IAPDRYTYSTLITCFGKEGMFDSAISW 76
           SV  YN +L         E A  +F++M+  G   PD +T+S+LIT +   G    A + 
Sbjct: 385 SVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAM 444

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M +     ++ + ++LI+   K +   + +  F RL    I PD      M+NV  +
Sbjct: 445 LNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQ 504

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   +E   LI+ + +   K   V    L     E     EA  +F   + ++  +    
Sbjct: 505 SPK-EELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELF---DSISADVXKAY 560

Query: 197 CNIMIDVYGQLDMAKDADRLF 217
           CN +ID+   L++ + A  LF
Sbjct: 561 CNCLIDLCVNLNLLEKACELF 581


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 172/343 (50%), Gaps = 13/343 (3%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R  P+   Y +++  + +A++ ++A+ LF  M+  G  PD  TY+ L+  F K G  D
Sbjct: 224 QRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVD 283

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L+  E+DR   D   YS LI+   +   +  A   + ++    I PD++ Y  M+
Sbjct: 284 EALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMM 343

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               KA  FK+A  L+ EM E+G+ PDT  Y+ L+  Y +     EA S+  E+++ +C 
Sbjct: 344 KGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCF 403

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
               T  I+I    +  +  DA ++F  M K G  PSVV++N L+  + +A    +A  L
Sbjct: 404 SSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLL 463

Query: 252 F-------------RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           F             RL Q      +  +  TM++    S    KA N++ ++ + G  PN
Sbjct: 464 FYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPN 523

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            ITY+ +I  + KAG ++ A  LF++L+  G+  D V Y T+I
Sbjct: 524 IITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLI 566



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 227/520 (43%), Gaps = 31/520 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P VF YN VL  ++R +   LA G+++ M +    P+  T+S LI    K G   +A+  
Sbjct: 159 PDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQM 218

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q R+  + + Y+ +I    +      A  +F  +K  G +PD V YN +++ F K
Sbjct: 219 FDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCK 278

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  L++   +     D   YS L++      +F +A   + +M E N   D+  
Sbjct: 279 LGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVIL 338

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
             IM+    +    KDA RL   M + G+ P    YN L++ Y +  L  EA  L   + 
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEIS 398

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           + +   +  TY  +I    +S     A  +  EM+  G  P+ +T++ +I  + KAG ++
Sbjct: 399 KNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIE 458

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
           +A +LF K+    +  +P L+         + L   A R+L      +T   +T +  L 
Sbjct: 459 KAQLLFYKME---IGRNPSLF---------LRLSQGANRVL------DTASLQTMVEQLC 500

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
            +G I +A  +  Q  D+G   +I  +  +I  F +        ++F++++  G  PDS 
Sbjct: 501 DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSV 560

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF--- 493
               ++N        E A  +  ++ + GC    +V+   ++    R    +  SL+   
Sbjct: 561 TYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKY 620

Query: 494 ---------ERLDS-DSNINKKELHHVVAGIYERANRLND 523
                    E L S + N  K E+   V G+ E   +LND
Sbjct: 621 LRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLND 660



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/465 (20%), Positives = 204/465 (43%), Gaps = 17/465 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S  ++N+++  +++   +EL   +  E+++ G +     ++ LI  + K  M + A+   
Sbjct: 90  SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESF 149

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
           + M+      D+  Y+ ++ +  +      A+ I++R+     +P++  ++ +I+   K+
Sbjct: 150 EMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKS 209

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              + A  + +EM ++ + P+ ++Y+ +++   +  K   A  +F  M +  C  D  T 
Sbjct: 210 GKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTY 269

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N ++  + +L    +A  L     K         Y+ L+     A  F +A   +R M  
Sbjct: 270 NALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTE 329

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
             I+ +V+ Y  M+K   K+ + + A  L+ EM  RG+ P+   Y+ +I  +   G LD 
Sbjct: 330 HNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDE 389

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAIT 373
           A  L  ++  +        Y  +I    R GLV  A+++ +E+ +    P+ +     I 
Sbjct: 390 AKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALID 449

Query: 374 ILARAGRIEEATWVF-------------RQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
              +AG IE+A  +F             R +  A  V D +    M+E    +       
Sbjct: 450 GFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY 509

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +  ++  +G+ P+     ++++ + K      A  L+ E+Q +G
Sbjct: 510 NILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG 554


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMFD 71
           R  P VF+YN++L  +    + + A  L   M   G    PD  +YST+I  F KEG  D
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                  +M   R+S ++V Y+++I    K     KA+ + + +  SG++PD + YN+++
Sbjct: 106 -------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F  +   KEA + +++MR  GV+PD V+Y++L++   +N +  EA  +F  M +    
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D+TT   ++  Y       +   L   M + GI P+   ++ L+  Y + E   EA+ +
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M+++ +  N VTY T+I +  KS   E A    ++M + G+ P++I Y+++I     
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCI 338

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
             K ++A  LF ++   G+ +  + + ++I ++ + G V  + +L 
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 171/338 (50%), Gaps = 20/338 (5%)

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE--VNCPLDLTTCN 198
           ++AR + +E+  +G+ PD  SY+ LLN   + ++  EAL +   M +   +CP D+ + +
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 199 IMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            +I+ +   G LD           M    I P+VV+YN+++    +A+   +A+ +   M
Sbjct: 93  TVINGFFKEGDLD----------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +  +  + +TYN+++  +  S + ++A   +++M++ G+EP+ +TY++++    K G+ 
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  +F  +   G++ D   Y T++  Y   G +     LL  + +    P     +IL
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
               A+  ++EEA  VF +    G   +   +G +I++  ++ +  + +  FE+M   G 
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
            PDS +   +++S     ++E A++L+ EM + G   S
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 172/412 (41%), Gaps = 72/412 (17%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E A  +FDE+ +RGI PD ++Y+ L+     E     A+  L  M  D   GD       
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADD--GGDCP----- 85

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
                                     PD+V+Y+T+IN F     FKE  L  ++M +Q +
Sbjct: 86  --------------------------PDVVSYSTVINGF-----FKEGDL--DKMLDQRI 112

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
            P+ V+Y++++    +     +A+ V   M +     D  T N ++  +      K+A  
Sbjct: 113 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV 172

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
               MR  G++P VV+YN+L+    +     EA  +F  M ++ ++ ++ TY T+++ Y 
Sbjct: 173 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYA 232

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
                 +   L+  M   GI PN   +S ++  + K  K++ A ++F K+R  G+     
Sbjct: 233 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL----- 287

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
                                      PN +   T I +L ++GR+E+A   F Q  D G
Sbjct: 288 --------------------------NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
              D  V+  +I       K+    E+F +M   G    +     +++S+ K
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 35/322 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R SP+V  YN ++  + +A+  + A  +   M + G+ PD  TY++++  F   G   
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            AI +L++M  D V  D+V Y++L++   K    ++A  IF  +   G+ PD+  Y T++
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLL 228

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
             +       E   L++ M   G+ P+   +S L+  Y +  K  EA+ VF++       
Sbjct: 229 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK------- 281

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                                       MR+ G++P+ V+Y T++ V  ++    +A+  
Sbjct: 282 ----------------------------MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F  M  + +  + + YN++I       + EKA  L  EM +RGI  + I +++II    K
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373

Query: 312 AGKLDRAAMLFQKLRSSGVEID 333
            G++  +  LF  +   GV+ D
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPD 395


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 176/346 (50%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+    N +++ +    Q   A    D++   G   D+ +Y TLI    K G   +A+
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             LQ+++   V  + V+Y+ +I    K    + A  ++S + S GI P++V Y+ +I+ F
Sbjct: 63  DLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 122

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 K+A  L  ++  + +KPD  +++ L++ + ++ K  E  +VFA M +     D+
Sbjct: 123 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 182

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N ++D Y  +     A  +F +M + G++P + SYN L+  + + +   +A++LF  
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 242

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K I  NVVTYN++I    KS     A  L+ +M +RG+ PN +TY++II    K  +
Sbjct: 243 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 302

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +D+A  L  K +  G++     Y  +I    + G +  A+ +  +L
Sbjct: 303 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 165/344 (47%), Gaps = 4/344 (1%)

Query: 49  GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKA 108
           G  P+  T +TLI     +G    A  +  ++       D V Y  LI    K+ +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           + +  R+    +  + V YNT+I    K K   +A  L  EM  +G+ P+ V+YS L++ 
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           +    K  +A+ +F ++   N   D  T NI++D + +    K+   +F  M K GI P 
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
           VV+YN+L+  Y   +    A  +F  M +  +  ++ +YN +I  + K  + +KA NL  
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM  + I PN +TY+++I    K+G++  A  L  ++   GV  + + Y ++I A  +  
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVF 388
            V  A  L+ + +    QP+       I  L + GR+++A  +F
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 154/347 (44%), Gaps = 4/347 (1%)

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
           G  P+ +  NT+I          +A L  +++   G   D VSY TL++   +  +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
           L +   ++     L+    N +I    +     DA  L+  M   GI P+VV+Y+ L+  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
           +       +AI LF  +  + I+ +  T+N ++  + K  + ++   +   M  +GI P+
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
            +TY++++  +    +++ A  +F  +   GV  D   Y  +I  + ++  V  A  L +
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNK 414
           E+   N IP      + I  L+++GRI  A  +  Q  D G   +I  +  +I+   +  
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 415 KYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           +    I +  K +  G  P  +   ++++   K    + A +++ ++
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 113/256 (44%), Gaps = 10/256 (3%)

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
           G  PN IT +T+I      G++ +A +   KL + G  +D V Y T+I    +VG    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 354 KRLLH----ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
             LL     +L Q N +   T I  + +   + +A  ++ +    G   ++  +  +I  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
           F    K  + I++F K+      PD +   ++++ + K R+ +    +++ M ++G +  
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 470 DQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMN 529
              +  ++  Y   K+ N  +S+F  +           ++++   + +  +++ A  + N
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 530 RMNKRR------TFNS 539
            M+ +       T+NS
Sbjct: 242 EMHCKNIIPNVVTYNS 257


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 217/474 (45%), Gaps = 23/474 (4%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P++ A N VL  +++A++   A  LFDEM +RG+ P   TY+TLI     +G    A
Sbjct: 146 RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKA 205

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                QM   ++  ++V Y+ +I    +      A  +F  +K +G+ P+   YN +++ 
Sbjct: 206 QEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSG 265

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
             +      A +L +E+ + G+ P+ V ++TL++ + +  +F EA  +F EM        
Sbjct: 266 HCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPT 325

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           +   N ++D   +   A++A  L+  M ++G+ P   + + ++R   +      A    +
Sbjct: 326 VPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQ 385

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +Q   +  N   YN +I  Y +    E+A      M   GIEPN ++YS++I    K G
Sbjct: 386 GVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRG 445

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           K+  A  ++ ++ + G+E + V Y  +I  + + G +  A RL  E+ +    PN I   
Sbjct: 446 KMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVS 505

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDI-SVFG-------CMIE----------LFS 411
             +  L R  R++EA   F   +   +  DI SVF        C+I              
Sbjct: 506 VLVDGLCRENRVQEAVR-FVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLY 564

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            + ++    ++F  MR +G  PDS    L++     L     A  LY++M + G
Sbjct: 565 LDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIG 618



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 189/415 (45%), Gaps = 9/415 (2%)

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           L+    + G+ D A+   +++   R    L   + +++   K      A  +F  +   G
Sbjct: 125 LVIALSQMGLLDEALYVFRRL---RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           +VP +V YNT+IN         +A+ + ++M  Q + P+ V+Y+T++    E     +A 
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +F  M E     +  T N+++  + Q D    A  L+  + K G++P+ V + TL+  +
Sbjct: 242 RLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            +A+ F EA  +F  M R  +   V  YN+++    +S   ++A  L QEM   G+ P+ 
Sbjct: 302 CKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDE 361

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG----LVAHAKR 355
            T S ++      G++  A    Q ++  GV ++   Y  +I  Y R+G     +A   R
Sbjct: 362 FTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTR 421

Query: 356 LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +     +PN +   + I   ++ G+++ A  ++ +    G   ++  +  +I   ++N  
Sbjct: 422 MTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 481

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
                 + ++M   G  P++  ++++++  G  RE    + +   M+  G   SD
Sbjct: 482 IDAAFRLHKEMIENGISPNAITVSVLVD--GLCRENRVQEAVRFVMEYSGLKCSD 534



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 163/385 (42%), Gaps = 52/385 (13%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +EA   P+ + YNV++    +      A  L+ E+ + G+ P+   ++TLI  F K   F
Sbjct: 248 KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRF 307

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A     +M +  V+  + +Y++L++ A +  +  +A++++  +   G+ PD    + +
Sbjct: 308 SEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIV 367

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +           A   ++ ++E GV  +  +Y+ L++ Y       EAL+    M EV  
Sbjct: 368 VRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEV-- 425

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
                                            GI+P+VVSY++L+  + +      A+ 
Sbjct: 426 ---------------------------------GIEPNVVSYSSLIDGHSKRGKMQIAMA 452

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           ++  M  K IE NVVTY  +I  + K+   + A  L +EM   GI PNAIT S ++    
Sbjct: 453 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLC 512

Query: 311 KAGKLDRA---AMLFQKLRSSGVE--------------IDPVLYQTMIVAYERVGLVAHA 353
           +  ++  A    M +  L+ S +                + V+Y T+I      G    A
Sbjct: 513 RENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEA 572

Query: 354 KRLLHELRQPNTIPRETAITILARA 378
            +L   +R+   IP     T+L R 
Sbjct: 573 GKLFSYMRKSGMIPDSFTYTLLIRG 597



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 156/328 (47%), Gaps = 30/328 (9%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P+V  YN ++    R+   + A  L+ EM + G+ PD +T S ++      G    A  
Sbjct: 323 APTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADR 382

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           +LQ +++D V+ +   Y+ LI+   ++ +  +A++  +R+   GI P++V+Y+++I+   
Sbjct: 383 FLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHS 442

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    + A  +  EM  +G++P+ V+Y+ L++ + +N     A  +  EM E     +  
Sbjct: 443 KRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAI 502

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T ++++D   + +  ++A R             V+ Y+ L           +   +  + 
Sbjct: 503 TVSVLVDGLCRENRVQEAVRF------------VMEYSGL-----------KCSDIHSVF 539

Query: 256 QRKEIEQNVVTYNTMIK---IYGKSL--EHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               IE+  +  N++I    IYG  L  +H +A  L   M+  G+ P++ TY+ +I    
Sbjct: 540 SNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQC 599

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
             G +  A ML+  +   GV+  P  Y+
Sbjct: 600 MLGYVLNAMMLYADMMKIGVK--PTRYK 625


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 210/427 (49%), Gaps = 14/427 (3%)

Query: 17  PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P VF+  ++L+ +    R+++  EL H + D  R  G APD  +Y+T+I  F KEG    
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELPHMMADG-RGGGSAPDVVSYTTVINGFFKEGDSGK 214

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A S   +M   R+S D+V YS++I    K     KA+ + + +  +G++P+   Y ++++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMH 274

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTV-----SYSTLLNLYVENHKFVEALSVFAEMNE 187
            +  +   KEA   ++++R  GV+PD +     +Y TLL  Y      V   ++   M  
Sbjct: 275 GYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVR 334

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                D    NI+I  Y +     +A  +F  MR+ G++P  V+Y  ++ +  ++    +
Sbjct: 335 NGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVED 394

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A+  F  M  + +    + YN++I       + E+A  L+ EM +RGI  N I +++II 
Sbjct: 395 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 454

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQP 363
              K G++  +  LF  +   GV+ D + Y T+I  Y   G +  A +LL  +     +P
Sbjct: 455 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 514

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           NT+   T I    +  R+ +A  +F++   +G   DI  +  +++   + ++ A   E++
Sbjct: 515 NTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 574

Query: 424 EKMRSAG 430
            ++  +G
Sbjct: 575 VRITESG 581



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 208/464 (44%), Gaps = 15/464 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V +Y  V+    +      A+  + EM  R I+PD  TYS++I    K    D A+ 
Sbjct: 193 APDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI-----VPDLVAYNTM 130
            L  M ++ V  +   Y++++          +AI    +++S G+      PD+  Y T+
Sbjct: 253 VLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTL 312

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  +           L++ M   G+ PD   Y+ L+  Y +  K  EA+ VF++M +   
Sbjct: 313 LQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGL 372

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T   +I +  +    +DA   F  M   G+ P  + YN+L+        +  A  
Sbjct: 373 NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 432

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIY---GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           L   M  + I  N + +N++I  +   G+ +E EK  +LM  +   G++P+ ITYST+I 
Sbjct: 433 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI---GVKPDIITYSTLID 489

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QP 363
            +  AGK+D A  L   + S G++ + V Y+T+I  Y ++  +  A  L  E+      P
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549

Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
           + I     +  L +  R   A  ++ +  ++G   ++S +  ++    +NK   + + +F
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609

Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           + +       ++    +++++  K+     A DL+      G V
Sbjct: 610 QNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLV 653



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 7/404 (1%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P +  Y  +L+           H L D M + GI PD Y Y+ LI  + K+G  D A+  
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M Q  ++ D V Y  +I +  K      A+  F ++   G+ P  + YN++I+    
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
              ++ A  LI EM ++G+  +T+ ++++++ + +  + +E+  +F  M  +    D+ T
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            + +ID Y       +A +L   M  +G+ P+ V+Y TL+  Y +    G+A+ LF+ M+
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEME 543

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
              +  +++TYN +++   ++     A  L   +   G +    TY+ I+    K    D
Sbjct: 544 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-----RETA 371
            A  +FQ L    ++++   +  MI A  +VG    AK L         +P     R  A
Sbjct: 604 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMA 663

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI-ELFSRNK 414
             I+ + G +EE   +F    D G   D  +   ++ EL  R +
Sbjct: 664 ENIIGQ-GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 706



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 184/394 (46%), Gaps = 21/394 (5%)

Query: 93  SNLIELARKLSDYSK-----AISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEAR 144
           +++  L R L+D ++     A+S ++R+  +G   + P +  Y  +I    +A       
Sbjct: 48  ASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGF 107

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS-VFAEMNEVNCPLDLTTCNIMIDV 203
             +  + ++G + + ++++ LL     + +  +A+  V   M E++C  D+ +C I++  
Sbjct: 108 AALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKG 167

Query: 204 YGQLDMAKDADRLFWSM---RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
               + +++A  L   M   R  G  P VVSY T++  + +    G+A   +  M  + I
Sbjct: 168 LCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRI 227

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VVTY+++I    K    +KA  ++  M   G+ PN  TY++I+  +  +G+   A  
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIG 287

Query: 321 LFQKLRSSGVEIDPV-----LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             +K+RS GVE D +      Y T++  Y   G +     LL  + +    P      IL
Sbjct: 288 FLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNIL 347

Query: 376 ----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
               A+ G+++EA  VF +    G   D   +G +I +  ++ +  + +  FE+M   G 
Sbjct: 348 ICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 407

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P + +   +++      ++E A++L  EM + G
Sbjct: 408 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 165/365 (45%), Gaps = 36/365 (9%)

Query: 4   AILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           A+LD +     + P  + YN+++    +  + + A  +F +MRQ+G+ PD  TY  +I  
Sbjct: 327 ALLDLMVRNGIH-PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGI 385

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI-------------ELARKLSDYSKAIS 110
             K G  + A+ + +QM  + +S   ++Y++LI             EL  ++ D    ++
Sbjct: 386 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 445

Query: 111 ----------------------IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
                                 +F  +   G+ PD++ Y+T+I+ +  A    EA  L+ 
Sbjct: 446 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 505

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
            M   G+KP+TV+Y TL+N Y +  +  +AL +F EM       D+ T NI++    Q  
Sbjct: 506 GMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTR 565

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
               A  L+  + + G    + +YN +L    + +L  +A+ +F+ +   +++    T+N
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 625

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            MI    K   + +A +L     + G+ PN  TY  +       G L+    LF  +  +
Sbjct: 626 IMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 685

Query: 329 GVEID 333
           G  +D
Sbjct: 686 GCTVD 690



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 2/194 (1%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +  SP +  YN++L+ + + ++   A  L+  + + G   +  TY+ ++    K  + 
Sbjct: 543 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 602

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+   Q +    +  +   ++ +I+   K+    +A  +F    S+G+VP+   Y  M
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662

Query: 131 I-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
             N+ G+  L +E   L   M + G   D+   + ++   ++  +   A +  + ++E +
Sbjct: 663 AENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721

Query: 190 CPLDLTTCNIMIDV 203
             L+ +T ++ ID+
Sbjct: 722 FSLEASTASLFIDL 735


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 218/425 (51%), Gaps = 13/425 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  ++  N+++    ++ Q  LA     ++ + G  PD +T+++LI  F      + A+S
Sbjct: 103 SNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMS 162

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            + QM +  +  D+V+Y+ +I+   K      A+S+F+++++ GI PD+V Y +++N   
Sbjct: 163 MVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLC 222

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +  +++A LL+  M ++ +KPD ++++ L++ +V+  K ++A  ++ EM +++   ++ 
Sbjct: 223 NSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIF 282

Query: 196 TCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T   +I+   + G+LD   +A ++F+ M   G  P VV+Y +L+  + + +   +A+ +F
Sbjct: 283 TYTSLINGLCMEGRLD---EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIF 339

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M +K +  N +TY T+I+ +G   +   A  +   M +RG+ PN  TY+ ++      
Sbjct: 340 YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYN 399

Query: 313 GKLDRAAMLF---QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
           GK+++A M+F   QK    GV  +   Y  ++      G +  A  +  ++++ +     
Sbjct: 400 GKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGI 459

Query: 370 TAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
              TI    + +AG++++A  +F      G   ++  +  MI    R         +F K
Sbjct: 460 ITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRK 519

Query: 426 MRSAG 430
           M+  G
Sbjct: 520 MKEDG 524



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 187/388 (48%), Gaps = 7/388 (1%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P +F +  ++       + E A  + ++M + GI PD   Y+T+I    K G  D+A+
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           S   QME   +  D+V+Y++L+        +  A  +   +    I PD++ +N +I+ F
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     +A+ L  EM +  + P+  +Y++L+N      +  EA  +F  M    C  D+
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                +I+ + +    +DA ++F+ M + G+  + ++Y TL++ +G       A  +F  
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR---GIEPNAITYSTIIAIWGK 311
           M  + +  N+ TYN ++     + +  KA  + ++MQ R   G+ PN  TY+ ++     
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
            GKL++A M+F  ++   ++I  + Y  +I    + G V  A  L   L     +PN + 
Sbjct: 437 NGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVT 496

Query: 368 RETAITILARAGRIEEATWVFRQAFDAG 395
             T I+ L R G + EA  +FR+  + G
Sbjct: 497 YTTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 190/449 (42%), Gaps = 42/449 (9%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  +LRN L + Q+  A  LF  M +    P    ++ L+    K   FD  I+  + ++
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              VS DL   + L+    + S    A S   +L   G  PD+  + ++IN F      +
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           EA  ++ +M E G+KPD V Y+T+++   +N     ALS+F +                 
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQ----------------- 201

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
                             M   GI P VV Y +L+     +  + +A  L R M +++I+
Sbjct: 202 ------------------MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIK 243

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            +V+T+N +I  + K  +   A  L  EM    I PN  TY+++I      G+LD A  +
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303

Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILAR 377
           F  + + G   D V Y ++I  + +   V  A ++ +E+ Q     NTI   T I     
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363

Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS---AGYFPD 434
            G+   A  VF      G   +I  +  ++     N K    + +FE M+     G  P+
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQE 463
                ++L+      + E A  ++ +MQ+
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQK 452



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 3/354 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P V  Y  ++ ++ +    + A  LF++M   GI PD   Y++L+      G + 
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L+ M + ++  D++ ++ LI+   K      A  +++ +    I P++  Y ++I
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N         EAR +   M  +G  PD V+Y++L+N + +  K  +A+ +F EM++    
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T   +I  +G +     A  +F  M   G+ P++ +YN LL          +A+ +
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 252 FRLMQRKEIE---QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           F  MQ++EI+    N+ TYN ++     + + EKA  +  +MQ R ++   ITY+ II  
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQG 468

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
             KAGK+  A  LF  L S GV+ + V Y TMI    R GL+  A  L  ++++
Sbjct: 469 MCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 168/331 (50%), Gaps = 5/331 (1%)

Query: 6   LDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           L   N+   Y   P V  Y  ++  +  + +W  A  L   M +R I PD  T++ LI  
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
           F KEG    A     +M Q  ++ ++  Y++LI          +A  +F  +++ G  PD
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
           +VAY ++IN F K K  ++A  +  EM ++G+  +T++Y+TL+  +    K   A  VF 
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFG 375

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYG 240
            M     P ++ T N+++           A  +F  M+K    G+ P++ +YN LL    
Sbjct: 376 HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLC 435

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                 +A+ +F  MQ+++++  ++TY  +I+   K+ + + A NL   + ++G++PN +
Sbjct: 436 YNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVV 495

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
           TY+T+I+   + G +  A +LF+K++  GV 
Sbjct: 496 TYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/381 (17%), Positives = 147/381 (38%), Gaps = 74/381 (19%)

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLM-------------------------------- 255
           +  +Y  +LR    +  F EA+ LF  M                                
Sbjct: 35  AFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLC 94

Query: 256 ---QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              Q   +  ++ T N ++  + +S +   A++ + ++   G EP+  T++++I  +   
Sbjct: 95  KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLG 154

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPR 368
            +++ A  +  ++   G++ D V+Y T+I +  + G V +A  L +++     +P+ +  
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK------------- 415
            + +  L  +GR  +A  + R         D+  F  +I+ F +  K             
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274

Query: 416 ---------YANVI-------------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
                    Y ++I             ++F  M + G FPD      ++N + K ++ E 
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334

Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           A  ++ EM ++G   +   +  ++  +G     N+ + +F  + S         ++V+  
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394

Query: 514 IYERANRLNDASRIMNRMNKR 534
                 ++N A  I   M KR
Sbjct: 395 CLCYNGKVNKALMIFEDMQKR 415



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 4/222 (1%)

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
           G+A+   RL+      +    Y  +++    SL+  +A +L   M      P+ I ++ +
Sbjct: 18  GKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRL 77

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---- 361
           + +  K  K D    L + L+  GV  D      ++  + +      A   L +L     
Sbjct: 78  LNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGF 137

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +P+     + I       RIEEA  +  Q  + G   D+ ++  +I+   +N    N + 
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
           +F +M + G  PD  +   ++N       +  AD L   M +
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK 239


>gi|242037347|ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
 gi|241919922|gb|EER93066.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
          Length = 722

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 174/340 (51%), Gaps = 7/340 (2%)

Query: 1   RSVAILDWIN--EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS 58
           +++++L W+       +      +NV L+++  A+QW  A  L  +M   G+  D  TYS
Sbjct: 173 KTLSLLAWLRALPAGAFQLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYS 232

Query: 59  TLITCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
           TLIT   +   F  A+ W ++M   D V  D V YS ++++  +L    + +++F R + 
Sbjct: 233 TLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARG 292

Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
           SG  PD VA+  +  +FG+A  ++  + + +EM E G+KP+   Y+ LL    +  K   
Sbjct: 293 SGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTGKPGL 352

Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
           A ++F EM E     +  T   +  +YG+    +DA +L+  MR++ +    +  NTLL 
Sbjct: 353 ARNLFEEMVEQGVDPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADNILCNTLLS 412

Query: 238 VYGEAELFGEAIHLFRLMQRKEI----EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
           +  +  L  EA  LF  M+  E     + +  +Y  MI IYG + + ++A  L  EM   
Sbjct: 413 MCADVGLVNEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDRALQLFGEMLKG 472

Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           GIEPN ++Y+ +I   GKA ++ +A  + +     G++ D
Sbjct: 473 GIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGLEKGLKPD 512



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 9/330 (2%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D + +N  +     A+ +  A  L  +M + GV  D ++YSTL+       +F +A+  F
Sbjct: 192 DTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWF 251

Query: 183 AEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
             M   +  L D  T + ++DVY QL M ++   LF   R  G  P  V++  L +++GE
Sbjct: 252 ERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGE 311

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A  +     +F+ M    I+ N+  YN +++  GK+ +   A NL +EM  +G++PNA T
Sbjct: 312 AGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVDPNART 371

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
            + +  I+G+A     A  L+ K+R   +  D +L  T++     VGLV  A++L +E++
Sbjct: 372 LTALAKIYGRARWGRDALQLWDKMRELKLPADNILCNTLLSMCADVGLVNEAEQLFNEMK 431

Query: 362 QPNT--IPRE------TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
            P    +P+         I I    G  + A  +F +    G   +I  +  +I+   + 
Sbjct: 432 DPECRDVPKPDKWSYTAMINIYGSNGDTDRALQLFGEMLKGGIEPNIMSYTIVIQCLGKA 491

Query: 414 KKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           ++    +EV E     G  PD  +   +L+
Sbjct: 492 QRIQQAVEVLEAGLEKGLKPDDRLCGCLLS 521



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E    P++F YN +L  + +  +  LA  LF+EM ++G+ P+  T + L   +G+     
Sbjct: 327 EVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVDPNARTLTALAKIYGRARWGR 386

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI----VPDLVAY 127
            A+    +M + ++  D +L + L+ +   +   ++A  +F+ +K         PD  +Y
Sbjct: 387 DALQLWDKMRELKLPADNILCNTLLSMCADVGLVNEAEQLFNEMKDPECRDVPKPDKWSY 446

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
             MIN++G       A  L  EM + G++P+ +SY+ ++    +  +  +A+ V     E
Sbjct: 447 TAMINIYGSNGDTDRALQLFGEMLKGGIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGLE 506

Query: 188 VNCPLDLTTCNIMIDV 203
                D   C  ++ V
Sbjct: 507 KGLKPDDRLCGCLLSV 522



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/286 (18%), Positives = 123/286 (43%), Gaps = 36/286 (12%)

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF-RLMQRKEIEQNVVTYNTMI 271
           A+RL   M   G+    ++Y+TL+        F +A+  F R+     +  + VTY+ ++
Sbjct: 212 AERLALDMLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVL 271

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
            +Y +    E+   L    +  G +P+ + ++ +  ++G+AG  +    +F+++   G++
Sbjct: 272 DVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIK 331

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
            +  +Y  ++ A  + G    A+ L  E+ +    P    +T LA+              
Sbjct: 332 PNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVDPNARTLTALAK-------------- 377

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
                            ++ R +   + +++++KMR      D+ +   +L+    +   
Sbjct: 378 -----------------IYGRARWGRDALQLWDKMRELKLPADNILCNTLLSMCADVGLV 420

Query: 452 ETADDLYSEMQEEGC---VFSDQVHFQ-MLSLYGARKDFNMLESLF 493
             A+ L++EM++  C      D+  +  M+++YG+  D +    LF
Sbjct: 421 NEAEQLFNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDRALQLF 466



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 117/286 (40%), Gaps = 42/286 (14%)

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R +     + + + +N  +K    + +   A  L  +M + G+  + ITYST+I    +
Sbjct: 181 LRALPAGAFQLDTIFFNVALKSLRAARQWPHAERLALDMLDAGVPLDNITYSTLITAARR 240

Query: 312 AGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             +  +A   F+++ ++ GV  D V Y  ++  Y ++G+                     
Sbjct: 241 CRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMK-------------------- 280

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
                      EE   +F +A  +G   D   F  + ++F     Y  +  VF++M   G
Sbjct: 281 -----------EEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVG 329

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG----ARKDF 486
             P+  +   +L + GK  +   A +L+ EM E+G   + +    +  +YG     R   
Sbjct: 330 IKPNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVDPNARTLTALAKIYGRARWGRDAL 389

Query: 487 NMLESLFE-RLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            + + + E +L +D NI    L  + A +      +N+A ++ N M
Sbjct: 390 QLWDKMRELKLPAD-NILCNTLLSMCADV----GLVNEAEQLFNEM 430


>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
          Length = 831

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 202/415 (48%), Gaps = 7/415 (1%)

Query: 38  AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
           AH +F+ + + G  P   TY+TL+T   ++  F S +S + ++E++ +  D +L++ +I 
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397

Query: 98  LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIEEMREQGVK 156
            + +  +  +A+ IF ++K SG  P    +NT+I  +GK  KL + +RLL   +R++ ++
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA-DR 215
           P+  + + L+  +    K  EA ++  +M       D+ T N +   Y ++     A D 
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
           +   M    + P+V +  T++  Y E     EA+  F  M+   +  N+  +N++IK + 
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
              + +    ++  M+  G++P+ +T+ST++  W   G + R   ++  +   G++ D  
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
            +  +   Y R G    AK++L+++R+    PN +     I+    AG +++A  V+++ 
Sbjct: 638 AFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697

Query: 392 FD-AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
               G   +++ +  +I  F   K+     E+ + M      P    + L+ + +
Sbjct: 698 CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 178/377 (47%), Gaps = 10/377 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L + LIE  R      +A SIF+ L   G  P L+ Y T++    + K F     LI ++
Sbjct: 325 LMNGLIERGRP----QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
            + G+KPDT+ ++ ++N   E+    +A+ +F +M E  C    +T N +I  YG++   
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440

Query: 211 KDADRLFWSM-RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
           +++ RL   M R   + P+  + N L++ +       EA ++   MQ   ++ +VVT+NT
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500

Query: 270 MIKIYGKSLEHEKATNL-MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           + K Y +      A ++ +  M +  ++PN  T  TI+  + + GK++ A   F +++  
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560

Query: 329 GVEIDPVLYQTMIVAYERVG---LVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEA 384
           GV  +  ++ ++I  +  +     V     L+ E   +P+ +   T +   +  G ++  
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             ++    + G   DI  F  + + ++R  +     ++  +MR  G  P+  I   +++ 
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISG 680

Query: 445 YGKLREFETADDLYSEM 461
           +    E + A  +Y +M
Sbjct: 681 WCSAGEMKKAMQVYKKM 697



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 7/332 (2%)

Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
           D  S + L+N  +E  +  EA S+F  + E      L T   ++    +         L 
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377

Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
             + K G+ P  + +N ++    E+    +A+ +F  M+    +    T+NT+IK YGK 
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437

Query: 278 LEHEKATNLMQEM-QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            + E+++ L+  M ++  ++PN  T + ++  W    K++ A  +  K++S GV+ D V 
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497

Query: 337 YQTMIVAYERVGLVAHAK-----RLLHELRQPNTIPRETAITILARAGRIEEATWVFRQA 391
           + T+  AY R+G    A+     R+LH   +PN     T +      G++EEA   F + 
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
            + G   ++ VF  +I+ F        V EV + M   G  PD    + ++N++  + + 
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617

Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
           +  +++Y++M E G +  D   F +L+   AR
Sbjct: 618 KRCEEIYTDMLEGG-IDPDIHAFSILAKGYAR 648



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 148/314 (47%), Gaps = 2/314 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S  +LD +  +    P+    N++++     ++ E A  +  +M+  G+ PD  T++TL 
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502

Query: 62  TCFGKEGMFDSAISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             + + G   +A   +  +M  ++V  ++     ++    +     +A+  F R+K  G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P+L  +N++I  F           +++ M E GVKPD V++STL+N +           
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           ++ +M E     D+   +I+   Y +    + A ++   MRK G+ P+VV Y  ++  + 
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWC 682

Query: 241 EAELFGEAIHLFRLMQR-KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            A    +A+ +++ M     +  N+ TY T+I  +G++ +  KA  L+++M+ + + P  
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742

Query: 300 ITYSTIIAIWGKAG 313
            T   I   W   G
Sbjct: 743 KTMQLIADGWKSIG 756



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/380 (21%), Positives = 163/380 (42%), Gaps = 44/380 (11%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P    +N ++     +   + A  +F++M++ G  P   T++TLI  +GK G  
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELA----RKLSDYSKAISIFSRLKSSGIVPDLVA 126
           + +   L  M +D +        N++  A    RK+ +   A +I  +++S G+ PD+V 
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE---AWNIVYKMQSYGVKPDVVT 497

Query: 127 YNTMINVFGK-AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
           +NT+   + +         ++I  M    VKP+  +  T++N Y E  K  EAL  F  M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557

Query: 186 NEVNC-----------------------------------PLDLTTCNIMIDVYGQLDMA 210
            E+                                       D+ T + +++ +  +   
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617

Query: 211 KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
           K  + ++  M + GIDP + +++ L + Y  A    +A  +   M++  +  NVV Y  +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQI 677

Query: 271 IKIYGKSLEHEKATNLMQEMQN-RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           I  +  + E +KA  + ++M    G+ PN  TY T+I  +G+A +  +A  L + +    
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737

Query: 330 VEIDPVLYQTMIVAYERVGL 349
           V       Q +   ++ +G+
Sbjct: 738 VVPTRKTMQLIADGWKSIGV 757



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/362 (20%), Positives = 167/362 (46%), Gaps = 6/362 (1%)

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
           +EA  +   + E+G KP  ++Y+TL+        F   LS+ +++ +     D    N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           I+   +      A ++F  M++ G  P+  ++NTL++ YG+     E+  L  +M R E+
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455

Query: 261 EQ-NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
            Q N  T N +++ +    + E+A N++ +MQ+ G++P+ +T++T+   + + G    A 
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515

Query: 320 -MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
            M+  ++  + V+ +     T++  Y   G +  A R  + +++    PN     + I  
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
                 ++    V     + G   D+  F  ++  +S         E++  M   G  PD
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
            H  +++   Y +  E E A  + ++M++ G   +  ++ Q++S + +  +      +++
Sbjct: 636 IHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695

Query: 495 RL 496
           ++
Sbjct: 696 KM 697


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 217/442 (49%), Gaps = 7/442 (1%)

Query: 6   LDWINE--EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           + + NE  +  + P    +N +L  V+ +  +      F+E + + +  D Y++  LI  
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKG 172

Query: 64  FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
             + G  + +   L ++ +   S ++V+Y+ LI+   K  +  KA  +F  +   G+V +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 124 LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFA 183
              Y  +IN   K  + K+   + E+M+E GV P+  +Y+ ++N   ++ +  +A  VF 
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 184 EMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAE 243
           EM E     ++ T N +I    +     +A+++   M+  GI+P++++YNTL+  +    
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 244 LFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
             G+A+ L R ++ + +  ++VTYN ++  + +  +   A  +++EM+ RGI+P+ +TY+
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412

Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
            +I  + ++  +++A  L   +   G+  D   Y  +I  +   G +  A RL   + + 
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 364 NTIPRE----TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           N  P E    T I    + G    A  + ++  +     +++ +  MIE+  + +K    
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532

Query: 420 IEVFEKMRSAGYFPDSHIIALV 441
             + EKM  +G  P + I++L+
Sbjct: 533 ERLVEKMIDSGIDPSTSILSLI 554



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 8/405 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           V+++ ++++    A + E +  L  E+ + G +P+   Y+TLI    K+G  + A     
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M +  +  +   Y+ LI    K     +   ++ +++  G+ P+L  YN ++N   K  
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             K+A  + +EMRE+GV  + V+Y+TL+       K  EA  V  +M       +L T N
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
            +ID +  +     A  L   ++  G+ PS+V+YN L+  +        A  + + M+ +
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I+ + VTY  +I  + +S   EKA  L   M+  G+ P+  TYS +I  +   G+++ A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
           + LF+ +     E + V+Y TMI+ Y + G    A +LL E+ +    PN       I +
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
           L +  + +EA  +  +  D+G     S+    + L SR K  ++V
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSI----LSLISRAKNDSHV 563



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 177/367 (48%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  +SP+V  Y  ++    +  + E A  LF EM + G+  +  TY+ LI    K G+  
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
                 ++M++D V  +L  Y+ ++    K      A  +F  ++  G+  ++V YNT+I
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               +     EA  ++++M+  G+ P+ ++Y+TL++ +    K  +ALS+  ++      
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             L T NI++  + +      A ++   M + GI PS V+Y  L+  +  ++   +AI L
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M+   +  +V TY+ +I  +    +  +A+ L + M  +  EPN + Y+T+I  + K
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
            G   RA  L +++    +  +   Y+ MI    +      A+RL+ ++      P  + 
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550

Query: 372 ITILARA 378
           +++++RA
Sbjct: 551 LSLISRA 557



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/479 (20%), Positives = 211/479 (44%), Gaps = 67/479 (13%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S ++L ++ E          Y V++ + ++++   L+   F+EM   G  P    ++ L+
Sbjct: 77  SSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL 136

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
           T                           V+ S         S +++  S F+  KS  +V
Sbjct: 137 T--------------------------FVVGS---------SSFNQWWSFFNENKSK-VV 160

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
            D+ ++  +I    +A   +++  L+ E+ E G  P+ V Y+TL++   +  +  +A  +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F EM ++    +  T  ++I+   +  + K    ++  M++ G+ P++ +YN ++    +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                +A  +F  M+ + +  N+VTYNT+I    + ++  +A  ++ +M++ GI PN IT
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           Y+T+I  +   GKL +A  L + L+S G+    V Y  ++  + R G  + A +++ E+ 
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
           +    P +   TIL                               I+ F+R+      I+
Sbjct: 401 ERGIKPSKVTYTIL-------------------------------IDTFARSDNMEKAIQ 429

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           +   M   G  PD H  +++++ +    +   A  L+  M E+ C  ++ ++  M+  Y
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 9/365 (2%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG----M 69
           R SP ++ +N V+  + R  Q   A  +  +++  G+AP   TY++LI  + K+G    M
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +   +  L++M +  +S   V +  LI    K S+ + A+ +F  +K  GI   +V YN+
Sbjct: 246 YHVDM-LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I+        +E   L+EEM + G+ P+ +++  +L  + +     +A      M E N
Sbjct: 305 LISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+    I+ID Y +L   +DA  +  +M K GI P+V +YN L+  +  +  +  A 
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            L   M+ K IE +VVTYN +I       E  KA  L+ EM   G+EPN +TY+TII  +
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
              G +  A  +  ++       + V Y   I  + ++G +  A  LL+E+      PN 
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544

Query: 366 IPRET 370
           I  ET
Sbjct: 545 ITYET 549



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 70/329 (21%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--C------ 63
           EA  SP+   + V++    +      A  +F+EM+Q+GIA    TY++LI+  C      
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 64  ---------------------------FGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
                                      F K+GM   A  W+  M +  V  D+V+Y+ LI
Sbjct: 317 EGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILI 376

Query: 97  ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           +  R+L     A+++   +   GI P++  YN +I  F ++  ++ A  L++EM+E+G++
Sbjct: 377 DGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
            D V+Y+ L+       +  +A+ +  EM+EV                            
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV---------------------------- 468

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
                  G++P+ ++YNT+++ + +      A  +   M++     NVVTYN  IK + +
Sbjct: 469 -------GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTI 305
             + ++A +L+ EM ++ + PN ITY TI
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 142/316 (44%), Gaps = 7/316 (2%)

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD-- 212
           V PD  +++T+++      +  +A  V  ++        + T N +ID Y +   A +  
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246

Query: 213 -ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
             D L   M + GI P+ V++  L+  Y +      A+ +F  M+++ I  +VVTYN++I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
                  + E+   LM+EM++ G+ PN IT+  ++  + K G +  A      +    VE
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWV 387
            D V+Y  +I  Y R+G +  A  +   + +    PN       IT  +R+G    A+ +
Sbjct: 367 PDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
             +  + G   D+  +  +I       +    +++ ++M   G  P+      ++  +  
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486

Query: 448 LREFETADDLYSEMQE 463
               ++A ++ + M++
Sbjct: 487 KGNIKSAYEIRTRMEK 502



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 106/225 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+   SP+   +  VL+   +      A+   D M +R + PD   Y+ LI  + + G  
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKM 385

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A++  + M +  +S ++  Y+ LI    +  D+  A  +   +K  GI  D+V YN +
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I         ++A  L++EM E G++P+ ++Y+T++  + +      A  +   M +   
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
             ++ T N+ I  + Q+    +A+ L   M    + P+ ++Y T+
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 7/246 (2%)

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           PS  S N LL     A+    A   FR   R+ +  ++ T+NT+I    +  +  KA ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 287 MQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            ++++  G+ P+  TY+++I  +   G AG +    ML +++  +G+    V +  +I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           Y +    A A R+  E++Q     + +   + I+ L   G++EE   +  +  D G   +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
              FGC+++ F +    A+  +  + M      PD  I  ++++ Y +L + E A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 460 EMQEEG 465
            M ++G
Sbjct: 394 AMAKKG 399


>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
          Length = 870

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 231/491 (47%), Gaps = 35/491 (7%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           +LA   FD           + +S LI+ + + G+   A+  L+ M+   +    V Y+ +
Sbjct: 226 DLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAV 285

Query: 96  IELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
           I+   K   D    +  F ++   G+ PD   +N+++    +A   ++AR + +EM   G
Sbjct: 286 IDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG 345

Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
              D  +Y+T ++   +      AL V  +M   N   ++ T + ++D + +L+   +A 
Sbjct: 346 SGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEAL 405

Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
           +L   M+ + I    V YNTLL +Y +   + E   +   M++  IE++ VTYN++I  Y
Sbjct: 406 KLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGY 465

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
           GK    +    L+Q+M+ +G+ P+ +TYST+I I+ KAG    A  ++   + SG++ D 
Sbjct: 466 GKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADV 525

Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQ 390
           VL+ + I    + GLV  A  LL E+     +PN +   T I    ++    E      +
Sbjct: 526 VLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTE------E 579

Query: 391 AFDAGEVKDISVFGCMIELFS----------------RNKKYANVIEVFEKMRSAGYFPD 434
             D G++  + V+G  +   +                R+++   ++E+F+KM   G  P+
Sbjct: 580 DSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPN 639

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY-GARKDFNMLESLF 493
               + +LN+  +   FE A  L  +++    +F + V+     L  G R+ ++   SLF
Sbjct: 640 VVTFSAILNACSRCNSFEDAALLLEQLR----LFDNSVYGVAYGLLMGHREAWSQARSLF 695

Query: 494 E---RLDSDSN 501
               R+DS ++
Sbjct: 696 NQLGRMDSPTS 706



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 162/300 (54%), Gaps = 7/300 (2%)

Query: 17  PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P+  +YN V+    +         G F +M Q G+ PDR T+++L+    + G  + A +
Sbjct: 277 PTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDART 336

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M       D+  Y+  ++   K  +   A+ +   ++++   P++V Y+T+++ F 
Sbjct: 337 VFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFS 396

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K + + EA  L E+M+   ++ D V Y+TLL +YV+  K+ E  +V  EM ++    D  
Sbjct: 397 KLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTV 456

Query: 196 TCNIMIDVYGQ---LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           T N +I+ YG+   LDM      L   MR  G+ PSV++Y+TL+ +Y +A + G+A +++
Sbjct: 457 TYNSLINGYGKQGRLDMVA---FLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 513

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
              +   ++ +VV +++ I    K+   E A +L+ EM   GI+PN +TY+TII  +GK+
Sbjct: 514 LDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKS 573



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 154/318 (48%), Gaps = 10/318 (3%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           ++ YN  +  + +     LA  +  +M      P+  TYSTL+  F K   +D A+   +
Sbjct: 350 IYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLRE 409

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           +M+  R+  D V Y+ L+ +  K   Y +  ++   ++  GI  D V YN++IN +GK  
Sbjct: 410 KMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQG 469

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
                  L+++MR QGV P  ++YSTL+++Y +     +A +V+ +  E     D+   +
Sbjct: 470 RLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFS 529

Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             ID   +  + + A  L   M KMGI P+VV+YNT++  +G++++F E       M   
Sbjct: 530 SFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIV 589

Query: 259 EIEQNVVTYNTMIKIYG----------KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
            +    V   T   I G          +S E      L Q+M  +G+ PN +T+S I+  
Sbjct: 590 GVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNA 649

Query: 309 WGKAGKLDRAAMLFQKLR 326
             +    + AA+L ++LR
Sbjct: 650 CSRCNSFEDAALLLEQLR 667


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/518 (21%), Positives = 235/518 (45%), Gaps = 32/518 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++ +  +      A     EM ++   P+  TYS+LI  + K+G+   A   
Sbjct: 113 PNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 172

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M       ++  Y+ L++ + K      A+ ++S++K  G+  ++   +  +N   +
Sbjct: 173 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 232

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   +EA  L+ +M   G+KPD V+Y+ L++ ++++ K   AL++  EM   N   D+ T
Sbjct: 233 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 292

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I+   +L  + D + ++ +MR+MG+ P + +YNT+L    +   +  A+ L+  M+
Sbjct: 293 FNVLINCLFKLGKS-DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 351

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +++  N +T N MI    ++   E A ++++EM   G+ P + TY  ++ I  K+ + D
Sbjct: 352 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 411

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
                 + L +  +++D  +Y  +                               I+ L 
Sbjct: 412 TILQTHELLVNMQLKVDKDVYNIL-------------------------------ISNLC 440

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G   +AT V +   + G + D + +  +I  +  +         +  M S    PD  
Sbjct: 441 KLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIE 500

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              L+L    K      ADDL SE+++ G V +   +  ++  +   ++      ++  +
Sbjct: 501 TYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEM 560

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                I K   ++++ G + +  ++  A  +MN M  +
Sbjct: 561 VIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 598



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/539 (21%), Positives = 222/539 (41%), Gaps = 54/539 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y+ ++   ++      A  +  +M  +   P+  TY+ L+    K G  
Sbjct: 142 EEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQ 201

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+    +M+Q  +  ++ +    +   ++     +A  + +++ S G+ PDLV Y  +
Sbjct: 202 DIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNL 261

Query: 131 INVFGKAKLFKEARLLIEE----------------------------------MREQGVK 156
           ++ F K+     A  L +E                                  MRE G+ 
Sbjct: 262 MDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLS 321

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD  +Y+T+LN   +   +  AL ++ EM       +  TCNIMI+   +    ++A  +
Sbjct: 322 PDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDI 381

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M  MG+ P+  +Y  LL +  ++      +    L+   +++ +   YN +I    K
Sbjct: 382 LKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCK 441

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                KAT ++++M+ RGI  +  TY+ +I  +  +  L RA M +  + S  V  D   
Sbjct: 442 LGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIET 501

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    + GL+  A  LL E+++    PN    ET +    +    +E   ++ +  
Sbjct: 502 YNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMV 561

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G +     +  +I  FS+  K     E+  +M++ G  P      +++  +  L +  
Sbjct: 562 IKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMP 621

Query: 453 T------------ADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKDFNM-LESLFER 495
                        A  L+ EM + G V  +     + S +   G + D  M L+S ++R
Sbjct: 622 DLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 680



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/530 (21%), Positives = 235/530 (44%), Gaps = 21/530 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +  +L  + +  +      L  EM + G+  +  +Y+ L+    K G    A+  
Sbjct: 8   PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M     + D++  + LI+   K     +A  +F  L    +VP+ + Y+ +I+   K
Sbjct: 68  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCK 127

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A   + EM E+   P+ ++YS+L+N YV+     +A  V  +M   N   ++ T
Sbjct: 128 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICT 187

Query: 197 CNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
             I++D     G  D+A D   L+  M++ G+  +V   +  +     +    EA  L  
Sbjct: 188 YAILLDGSFKAGWQDIALD---LYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVA 244

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M    ++ ++V Y  ++  + KS +   A NL QEM ++ +  + +T++ +I    K G
Sbjct: 245 KMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG 304

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           K D  + ++  +R  G+  D   Y TM+    + G    A  L +E++     PN I   
Sbjct: 305 KSDTES-IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCN 363

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
             I  L  AGR+E A  + ++    G     + +  ++ + S++++   +++  E + + 
Sbjct: 364 IMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNM 423

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV-----FSDQVHFQMLSLYGARK 484
               D  +  +++++  KL     A  +  +M+E G +     ++  +H   +S +  R 
Sbjct: 424 QLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRA 483

Query: 485 DFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                  L ER+  D      E ++++ G   +A  +++A  +++ + KR
Sbjct: 484 FMTYSTMLSERVSPDI-----ETYNLLLGGLSKAGLIHEADDLLSEIKKR 528



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 168/351 (47%), Gaps = 7/351 (1%)

Query: 117 SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
            SGI PD+V + +++    K     E +LL+ EM + G+  + VSY+ LL+   +  K  
Sbjct: 3   GSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVA 62

Query: 177 EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLL 236
           EAL   A M       D+  C ++ID   +    K+A+ LF ++ ++ + P+ ++Y+ L+
Sbjct: 63  EALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALI 122

Query: 237 RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
               +      A      M+ K+   NV+TY+++I  Y K      A  ++++M ++   
Sbjct: 123 DSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM 182

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
           PN  TY+ ++    KAG  D A  L+ K++  G++ +  +    +   +R G +  A+ L
Sbjct: 183 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 242

Query: 357 LHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE-LFS 411
           + ++     +P+ +     +    ++G++  A  + ++      V DI  F  +I  LF 
Sbjct: 243 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK 302

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
             K  ++   ++  MR  G  PD      +LN   K   + +A +L++EM+
Sbjct: 303 LGK--SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 351



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 43/217 (19%)

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
           M   GI P+ +T+ +I+    K GKL    +L +++   G+ ++ V Y  ++ A  + G 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 350 VAHAKRLLHEL--RQPN--TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           VA A   L  +  R  N   I     I  L ++G+I+EA ++F   +    V +   +  
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 406 MIELFSRNK------------------------KYANVI-------------EVFEKMRS 428
           +I+  SR K                         Y+++I             +V  KM  
Sbjct: 121 LID--SRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVH 178

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
               P+    A++L+   K    + A DLYS+M++ G
Sbjct: 179 KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGG 215


>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
 gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
          Length = 1429

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 41/413 (9%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRY-TYST 59
           R++ + +W+N    +SP+      +L  + R  Q  LA  +F   R      DR   Y+ 
Sbjct: 173 RALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIF--TRAEPTVGDRVQVYNA 230

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           ++  + + G F  A   L  M Q     DL+ ++ LI                +RLKS G
Sbjct: 231 MMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLIN---------------ARLKSGG 275

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + P+LV                    L++ +R  G++PD ++Y+TLL+    +     A+
Sbjct: 276 LTPNLVVE------------------LLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAV 317

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            VF +M    C  DL T N MI VYG+  +A +A+RLF  +   G  P  V+YN+LL  +
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAF 377

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN-RGIEPN 298
                  +   +++ MQ+    ++ +TYNT+I +YGK  + + A  L ++M+   G  P+
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR--- 355
           AITY+ +I   GKA +   AA L  ++   G++     Y  +I  Y + G    A+    
Sbjct: 438 AITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497

Query: 356 -LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            +L    +P+ +     + +L R     +A  ++R     G     S++  MI
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMI 550



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 212/457 (46%), Gaps = 42/457 (9%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            Y  +L   +  + +  A  +F E+R  G  P      +++  + K G  ++A   + Q E
Sbjct: 684  YETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAE 743

Query: 82   QDRVS-GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
                      +Y+++IE   KL  + KA S+   L+ SG  PDL  +N++++ + +   +
Sbjct: 744  TKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCY 803

Query: 141  KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
            + AR +   M   G  P   S + LL+    + +  E   V  E+ ++   +  ++  +M
Sbjct: 804  ERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863

Query: 201  IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY---------------------------- 232
            +D + +     + ++++ SM+  G  P++  Y                            
Sbjct: 864  LDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923

Query: 233  -------NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
                   N++L++Y   E + + + +++ ++   +E +  TYNT+I +Y +    E+  +
Sbjct: 924  KVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYS 983

Query: 286  LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
            LMQ+M+N G++P   TY ++I+ +GK   L++A  LF++L S G+++D   Y TM+    
Sbjct: 984  LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043

Query: 346  RVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS 401
              G  + A++LL  ++     P    + +L    + +G  +EA  V        EV+  +
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN-LKNTEVELTT 1102

Query: 402  V-FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            + +  +I+ + R+K Y + IE   +M+  G  PD  I
Sbjct: 1103 LPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRI 1139



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 168/348 (48%), Gaps = 9/348 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+A+  +   E      V  YN ++    R+ ++  A  L D MRQRG  PD  +++TLI
Sbjct: 208 SLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLI 267

Query: 62  TCFGKEGMFDS--AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
               K G       +  L  +    +  D + Y+ L+    + S+   A+ +F  +++  
Sbjct: 268 NARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHR 327

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PDL  YN MI+V+G+  L  EA  L  E+  +G  PD V+Y++LL  +       +  
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVK 387

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKM-GIDPSVVSYNTL 235
            V+ +M ++    D  T N +I +Y   GQLD+A    +L+  M+ + G +P  ++Y  L
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL---QLYKDMKGLSGRNPDAITYTVL 444

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
           +   G+A    EA  L   M    I+  + TY+ +I  Y K+ + E+A +    M   G 
Sbjct: 445 IDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504

Query: 296 EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
           +P+ + YS ++ +  +  +  +A +L++ + S G      LY+ MI+ 
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILG 552



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 234/540 (43%), Gaps = 39/540 (7%)

Query: 3   VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
           V +LD +       P    YN +L    R    E A  +F++M      PD +TY+ +I+
Sbjct: 282 VELLDMVRNSG-LRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMIS 340

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
            +G+ G+   A     ++E    S D V Y++L+    +  +  K   ++ +++  G   
Sbjct: 341 VYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMRE-QGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           D + YNT+I+++GK      A  L ++M+   G  PD ++Y+ L++   + ++ VEA ++
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAAL 460

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
            +EM +V     L T + +I  Y +    ++A+  F  M + G  P  ++Y+ +L V   
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR-GIEPNAI 300
                +A  L+R M       +   Y  MI    K    +     +++M+   G+ P  I
Sbjct: 521 GNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEI 580

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           +     ++  K    D AA   +   ++G E++     +++ +Y   G  + A  LL  L
Sbjct: 581 S-----SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFL 635

Query: 361 RQPNTIPR----ETAITILARAGRIEEA-----------TWVFRQAFDAGEVKDISVFGC 405
           ++  +  +    E  I +  +   I  A            W F      G     ++  C
Sbjct: 636 KEHASGSKRLINEALIVLHCKVNNIGAALDEYLADPCVHGWCF-----GGSTMYETLLHC 690

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            +     N+ YA   +VF ++R +G  P   +   ++  Y KL   ETA  + ++ + +G
Sbjct: 691 CVA----NEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKG 746

Query: 466 CVFS-DQVHFQMLSLYGARKDFNMLESLFERL-DSDSNINKKELHHVVA-----GIYERA 518
             F+   ++  ++  YG  K +   ES+   L  S    + K  + +++     G YERA
Sbjct: 747 FHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERA 806



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 183/432 (42%), Gaps = 76/432 (17%)

Query: 106 SKAISIFSRLKSSGIVPDLV-AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
           S A+ IF+R + +  V D V  YN M+ V+ ++  F +A+ L++ MR++G  PD +S++T
Sbjct: 208 SLAVEIFTRAEPT--VGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNT 265

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L+N  +++                       T N+++++   LDM          +R  G
Sbjct: 266 LINARLKSGGL--------------------TPNLVVEL---LDM----------VRNSG 292

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P  ++YNTLL           A+ +F  M+    + ++ TYN MI +YG+     +A 
Sbjct: 293 LRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L  E++ +G  P+A+TY++++  + +    ++   ++Q+++  G   D + Y T+I  Y
Sbjct: 353 RLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412

Query: 345 ERVGLVAHAKRLLHEL-----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
            + G +  A +L  ++     R P+ I     I  L +A R  EA  +  +  D G    
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPT 472

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  +I                                     Y K  + E A+D +S
Sbjct: 473 LQTYSALI-----------------------------------CGYAKAGKREEAEDTFS 497

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
            M   G    +  +  ML +     +      L+  + SD +     L+ ++     + N
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKEN 557

Query: 520 RLNDASRIMNRM 531
           R +D  + +  M
Sbjct: 558 RSDDVQKTIRDM 569



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 142/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            ++  M+  G  P    Y  +I    K      A   + +ME+     +L ++++++++  
Sbjct: 879  IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + DY K + ++ R+K SG+ PD   YNT+I ++ + +  +E   L+++MR  G+ P   
Sbjct: 939  VIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLD 998

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +L++ + +     +A  +F E+      LD +  + M+ +         A++L   M
Sbjct: 999  TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            +  GI+P++ + + L+  Y  +    EA  +   ++  E+E   + Y+++I  Y +S ++
Sbjct: 1059 KNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDY 1118

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +     + EM+  G+EP+   ++  +     + +     +L + L+  G +I
Sbjct: 1119 KSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDIGFDI 1170



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 118/568 (20%), Positives = 220/568 (38%), Gaps = 66/568 (11%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    Y V++ ++ +A +   A  L  EM   GI P   TYS LI  + K G  + A  
Sbjct: 435 NPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               M +     D + YS ++++  + ++  KA  ++  + S G  P    Y  MI    
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLM 554

Query: 136 KAKLFKEARLLIEEMRE-QGVKPDTVSY---------------------------STLLN 167
           K     + +  I +M E  G+ P  +S                             TLL+
Sbjct: 555 KENRSDDVQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLS 614

Query: 168 L---YVENHKFVEALSVFAEMNE--------VNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           +   Y  + +  EA  +   + E        +N  L +  C +              + +
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHCKV--------------NNI 660

Query: 217 FWSMRKMGIDPSV--------VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
             ++ +   DP V          Y TLL      E + EA  +F  ++    E +     
Sbjct: 661 GAALDEYLADPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCK 720

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIE-PNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           +M+ +Y K    E A  ++ + + +G     +  Y+ II  +GK     +A  +   LR 
Sbjct: 721 SMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQ 780

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEE 383
           SG   D   + +++ AY   G    A+ + + + +    P   +I  L  A    GR+EE
Sbjct: 781 SGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEE 840

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
              V  +  D G     S    M++ F+R      V +++  M++AGY P   +  +++ 
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIE 900

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
              K +    A+ + SEM+E        +   ML +Y   +D+     +++R+       
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEP 960

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRM 531
            +  ++ +  +Y R  R  +   +M +M
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYSLMQQM 988



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/392 (19%), Positives = 167/392 (42%), Gaps = 70/392 (17%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            Y  ++    + K W+ A  +   +RQ G  PD  T+++L++ + + G ++ A +    M 
Sbjct: 755  YTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMM 814

Query: 82   QDR----------------VSGDL----VLYSNLIELARKLSD---------YSKAISIF 112
            +D                 V G L    V+   L ++  K+S          +++A +IF
Sbjct: 815  RDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874

Query: 113  ------SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM---------------- 150
                  S +K++G +P +  Y  MI +  K K  ++A +++ EM                
Sbjct: 875  EVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934

Query: 151  -------------------REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                               +E G++PD  +Y+TL+ +Y  + +  E  S+  +M  +   
Sbjct: 935  KMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLD 994

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
              L T   +I  +G+    + A++LF  +   G+      Y+T++++  ++    +A  L
Sbjct: 995  PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
             ++M+   IE  + T + ++  Y  S   ++A  ++  ++N  +E   + YS++I  + +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLR 1114

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +           +++  G+E D  ++   + A
Sbjct: 1115 SKDYKSGIERLLEMKKEGLEPDHRIWTCFVRA 1146



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 106/537 (19%), Positives = 216/537 (40%), Gaps = 75/537 (13%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY+V+L  +LR  +   A  L+ +M   G  P    Y  +I    KE   D     
Sbjct: 506  PDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKT 565

Query: 77   LQQMEQDRVSGDLVLYSNLIE------LARKLS---------DYSKAISIFSRLKSSGIV 121
            ++ ME+      L + S L++       AR+L          +    +SI     SSG  
Sbjct: 566  IRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRH 625

Query: 122  PDLVAYNTMI--NVFGKAKLFKEARLLIE-EMREQGVKPD---------------TVSYS 163
             +       +  +  G  +L  EA +++  ++   G   D               +  Y 
Sbjct: 626  SEAFELLEFLKEHASGSKRLINEALIVLHCKVNNIGAALDEYLADPCVHGWCFGGSTMYE 685

Query: 164  TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM----------------------- 200
            TLL+  V N  + EA  VF+E+    C    + C  M                       
Sbjct: 686  TLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETK 745

Query: 201  -------------IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
                         I+ YG+L + + A+ +  ++R+ G  P + ++N+L+  Y E   +  
Sbjct: 746  GFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYER 805

Query: 248  AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
            A  +F  M R      V + N ++         E+   +++E+Q+ G + +  +   ++ 
Sbjct: 806  ARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLD 865

Query: 308  IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
             + +AG +     ++  ++++G      LY+ MI    +   V  A+ ++ E+ + N   
Sbjct: 866  AFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN-FK 924

Query: 368  RETAI--TILARAGRIEE---ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
             E AI  ++L     IE+      V+++  ++G   D + +  +I ++ R+++      +
Sbjct: 925  VELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSL 984

Query: 423  FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
             ++MR+ G  P       +++++GK +  E A+ L+ E+  +G       +  M+ +
Sbjct: 985  MQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/286 (17%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            EEA +   +  +N +L+     + ++    ++  +++ G+ PD  TY+TLI  + ++   
Sbjct: 919  EEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRP 978

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   S +QQM                                   ++ G+ P L  Y ++
Sbjct: 979  EEGYSLMQQM-----------------------------------RNLGLDPKLDTYKSL 1003

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            I+ FGK K  ++A  L EE+  +G+K D   Y T++ +  ++    +A  +   M     
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
               L T ++++  Y      ++A+++  +++   ++ + + Y++++  Y  ++ +   I 
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIE 1123

Query: 251  LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
                M+++ +E +   +   ++    S E  +   L++ +Q+ G +
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDIGFD 1169



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/278 (19%), Positives = 110/278 (39%), Gaps = 45/278 (16%)

Query: 297 PNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKR 355
           PNA   + I+ + G+  +   A  +F +   + G  +   +Y  M+  Y R G  + A+ 
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ--VYNAMMGVYSRSGKFSKAQE 246

Query: 356 LLHELRQ----PNTIPRETAITILARAGRIEEATWV--FRQAFDAGEVKDISVFGCMIEL 409
           LL  +RQ    P+ I   T I    ++G +     V       ++G   D   +  ++  
Sbjct: 247 LLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSA 306

Query: 410 FSRNKKYANVIEVFEKMRS-----------------------------------AGYFPD 434
            SR+      ++VFE M +                                    G+ PD
Sbjct: 307 CSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPD 366

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
           +     +L ++ + R  E   ++Y +MQ+ G    +  +  ++ +YG +   ++   L++
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426

Query: 495 RLDSDSNINKKEL-HHVVAGIYERANRLNDASRIMNRM 531
            +   S  N   + + V+     +ANR  +A+ +M+ M
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEM 464


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 139/617 (22%), Positives = 259/617 (41%), Gaps = 106/617 (17%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++P+ +  + +L+ +   K+W+ A  L  EM + G  P+  T+  +I    + G+ D A+
Sbjct: 199 FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAM 258

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS----------------- 117
             L QM + R +  +++Y+ +I    +L    +A+ +F ++                   
Sbjct: 259 GVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRD 318

Query: 118 ----------SGIV-----PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSY 162
                     +G+V     PD V +NT+I+      L   A  ++E+M + G KPD  +Y
Sbjct: 319 GRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTY 378

Query: 163 STLLNLYVENHKFVEALSVF--------------------------------AEM--NEV 188
           S L+N   E     +AL +                                 AEM  N++
Sbjct: 379 SALVNALSERGCVDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQL 438

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
           N  LD  T  ++ID   Q  +      +   M K G  P ++ YN+L+  + E     +A
Sbjct: 439 N--LDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDA 496

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + LF+ M  K   +NVVTYN M+K   ++ + E A  L+ EM      PN +T+ST+I+ 
Sbjct: 497 LELFKNMSCK---RNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISY 553

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIP 367
             + G ++ A  +F+K+       + ++Y T+I        V  A +LL+++  +P+TI 
Sbjct: 554 LCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKPDTIC 613

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI----------------ELFS 411
              A+  L RA R E+A  +  +      + D   F  +I                EL  
Sbjct: 614 YSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELML 673

Query: 412 RNKKYANVI----------------EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
           + +   NV                 +  + +R+    PD+   +  L    + + +E A 
Sbjct: 674 KYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDAR 733

Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGI 514
           +L +EM  + C   D+  F ML     +    +M   +FE++        +++H  +   
Sbjct: 734 ELIAEMFRKQCPL-DEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNG 792

Query: 515 YERANRLNDASRIMNRM 531
           Y    R+++  ++++ M
Sbjct: 793 YSEQRRVDEGLKLLSSM 809



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 191/448 (42%), Gaps = 51/448 (11%)

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
           D+V YNT++  + +     +AR L+ +M      P++ + STLL     N ++ +A  + 
Sbjct: 170 DVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDAEELL 226

Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
           +EM    CP +  T  ++I    Q  +A  A  +   M K      V+ YN ++    E 
Sbjct: 227 SEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAEL 286

Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
               EA+HLF  M  K    ++ +YNT++K   +    E A  L+  M  +   P+ +T+
Sbjct: 287 GRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTF 343

Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR- 361
           +T+I+     G +D A  + +++   G + D   Y  ++ A    G V  A  LL  +  
Sbjct: 344 NTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPW 403

Query: 362 QPNTIPRETAITILARAGR-----------------IEEATW------------------ 386
           +PNT+   + +  L RA R                 ++E T+                  
Sbjct: 404 KPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAE 463

Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA--LVLNS 444
           V R+    G   DI ++  +I  FS N    + +E+F+ M         +++    +L  
Sbjct: 464 VLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSC-----KRNVVTYNYMLKG 518

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNIN 503
             +  ++E A  L +EM ++ C   ++V F  L  Y  +K F      +FE++   + + 
Sbjct: 519 LCRAEQWEDAGKLVAEMVKDEC-LPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMP 577

Query: 504 KKELHHVVAGIYERANRLNDASRIMNRM 531
              ++  +         ++DA +++N M
Sbjct: 578 NVIIYSTLINGLSDQECVDDALKLLNDM 605



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/483 (20%), Positives = 187/483 (38%), Gaps = 49/483 (10%)

Query: 23  NVVLRNVLRAKQWELAHGLFDEMRQ------RGIAPDRYTYSTLITCFGKEGM------- 69
           + V RN L A        L D  R        G A D  TY+TL+  + +EG        
Sbjct: 135 DAVTRNTLVAGYCRAGGRLADAERMLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRL 193

Query: 70  -------------------------FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
                                    +D A   L +M +     + + +  +I    +   
Sbjct: 194 VADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGL 253

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +A+ +  ++        ++ YN +I+   +    +EA  L ++M     KPD  SY+T
Sbjct: 254 ADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNT 310

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           ++     + ++ +A ++ A M   +CP D  T N +I       +   A  +   M K G
Sbjct: 311 VMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYG 370

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
             P   +Y+ L+    E     +A+ L R +  K    N V Y +++K   ++   +   
Sbjct: 371 CKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVG 427

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+ EM    +  + +T+  II    + G +D  A + +++   G   D ++Y ++I  +
Sbjct: 428 KLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGF 487

Query: 345 ERVGLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
              G V  A  L   +  + N +     +  L RA + E+A  +  +      + +   F
Sbjct: 488 SENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTF 547

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
             +I    +       IEVFEKM      P+  I + ++N    L + E  DD    + +
Sbjct: 548 STLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLING---LSDQECVDDALKLLND 604

Query: 464 EGC 466
             C
Sbjct: 605 MPC 607


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 162/317 (51%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R SP V  +N ++       Q + A GLF EM  + I PD YT+S L+    K+G    A
Sbjct: 229 RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA 288

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            + L  M +  V  D+V YS+L++    +++ +KA  +FS +   G+ P   +YN MIN 
Sbjct: 289 KNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING 348

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            GK K+  EA  L +EM  +G+ PDTV+Y++L++   +  +   A  +  EM+    P D
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPAD 408

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T N +IDV  +      A  L   ++  GI PS+ +YN L+    +      A  +F+
Sbjct: 409 ILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQ 468

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K    N  TYN MI    K     +A  L+ +M+N GI P+A+TY TII    +  
Sbjct: 469 DLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528

Query: 314 KLDRAAMLFQKLRSSGV 330
           + ++A  L +++   G+
Sbjct: 529 ENEKAEKLLREMIIRGL 545



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 31/451 (6%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y P+   +N ++  +    + + A    D +   G   D+ +Y TLI    K G   +A+
Sbjct: 125 YHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAAL 184

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+++E   V+ D+V+Y+ +I    K    S A  ++S + +  I PD+V +N++I  F
Sbjct: 185 QMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                 KEA  L  EM  + + PD  ++S L++   ++     A ++ A M +     D+
Sbjct: 245 CVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDV 304

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T + ++D Y  ++    A  +F +M ++G+ P   SYN ++   G+ ++  EA+ LF+ 
Sbjct: 305 VTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K I  + VTYN++I    K      A  L+ EM N GI  + +TY+++I +  K   
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D+A  L +K++  G+                               QP+       I  
Sbjct: 425 IDKAIALVKKIKDQGI-------------------------------QPSMYTYNILIDG 453

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           L + GR++ A  VF+     G   +   +  MI    +   +     +  KM + G  PD
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +     ++ +  +  E E A+ L  EM   G
Sbjct: 514 AVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 199/437 (45%), Gaps = 4/437 (0%)

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           + +AIS   Q+E   ++  +V ++ L+     L + + A SIF+++   G  P  + +NT
Sbjct: 75  YTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNT 134

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +IN        KEA    + +   G   D VSY TL+N   +  +   AL +  ++    
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+   NI+I+   +     DA +L+  M    I P VV++N+L+  +       EA 
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  M  K I  +V T++ ++    K     +A N++  M  +G+ P+ +TYS+++  +
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNT 365
               ++++A  +F  +   GV      Y  MI    ++ +V  A  L  E+      P+T
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
           +   + I  L + GRI  A  +  +  + G   DI  +  +I++  +N      I + +K
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434

Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
           ++  G  P  +   ++++   K    + A D++ ++  +G   +   +  M++       
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494

Query: 486 FNMLESLFERLDSDSNI 502
           FN  E L  +++++  I
Sbjct: 495 FNEAEVLLSKMENNGII 511


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 4/418 (0%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           ++N V+    +  +   A  + +EM+  GI PD Y+YS LI  F  +G     +  +++M
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
           E  ++   +V Y++LI    K +    A+ IF  + +S    D   Y T+I+ F      
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             A  L+EEM    + P   S  +L+  Y +   F +AL VF  M       D   CN +
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           +D   +    K+A  L    ++ G + +  SYN ++    +      A+ L   M ++ +
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNV 632

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
             +VV Y+T+I  + K    ++A NL   M   GI  N  TY+ +++I+  + K+  A  
Sbjct: 633 LPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYG 692

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILA 376
           +F++++  G+ +D + Y T+IV +     +  A  L  E+ +    PN I     I    
Sbjct: 693 IFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFC 752

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
           ++ RI+ ATWVF +      + D+  +  +I+ + ++  +    ++++ M+  G  PD
Sbjct: 753 KSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPD 810



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 1/375 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E ++  PS+ +Y  ++  + +    + A  +F  +       D   Y TLI  F  +G  
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           DSAI  L++M  + +        +LI    KL  + +A+ +F+ +   GI PD +A N +
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++   +A  FKEA  L+E+ +E G   +  SY+ ++    +      AL +   M + N 
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNV 632

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              +   + +I  + +    K A  LF  M K+GI  ++ +Y  L+ ++  +    EA  
Sbjct: 633 LPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYG 692

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F+ M+ + +  + ++Y T+I  +  + E +KA  L +EM   G  PN ITY+ II  + 
Sbjct: 693 IFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFC 752

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           K+ ++D A  +F K+    V  D V Y  +I  Y + G    A +L   ++    +P + 
Sbjct: 753 KSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDI 812

Query: 371 AITILA-RAGRIEEA 384
              +L  +AG ++E 
Sbjct: 813 THNVLGLKAGTVQEG 827



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/543 (22%), Positives = 238/543 (43%), Gaps = 48/543 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE-----GMFD 71
           P +   N +L+ ++ A + E    +F+E++ RG +P+ YTY+ ++  +  +     GM  
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 72  SAI------------------SWLQQMEQ-DRVSGDLVLYSNLIELARKLSDYS------ 106
           +A+                  +++  + +   V   L+L  NL    + L+ +S      
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 107 ---------KAISIFSRLKSSGIVPDLVAYNTMINVF-GKAKLFKEARLLIEEMREQGVK 156
                    +A+ +   +KSSGI+PD+ +Y+ +IN F GK  + K   L+ EEM    +K
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLM-EEMEHSQIK 458

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P  VSY++L++   + +    A+ +F  +   +C  D T    +ID +        A +L
Sbjct: 459 PSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL 518

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M    + P+  S  +L+R Y +  LF +A+ +F  M R  I  + +  N ++    +
Sbjct: 519 LEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCR 578

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +   ++A  L+++ Q  G   N  +Y+ II    K G  +RA  L  ++    V    V 
Sbjct: 579 AGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVN 638

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAF 392
           Y T+I  + +      A  L   + +     N       ++I + + ++ EA  +F++  
Sbjct: 639 YSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
           + G   D   +  +I  F  N++      +FE+M   G  P+      +++ + K    +
Sbjct: 699 ERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRID 758

Query: 453 TADDLYSEMQEEGCVFSDQVHFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVV 511
            A  ++ +M  +  V  D V + +L   Y     F+    L++ +  D  +   ++ H V
Sbjct: 759 LATWVFDKMNRDS-VIPDVVTYTVLIDWYHKHGYFDQAHKLYDVM-KDKGVLPDDITHNV 816

Query: 512 AGI 514
            G+
Sbjct: 817 LGL 819



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/456 (19%), Positives = 197/456 (43%), Gaps = 14/456 (3%)

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           V++  LI +    S    A+ +FS  K  G+ PD+   N ++    +A   +  R + EE
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307

Query: 150 MREQGVKPDTVSYSTLLNLYVE----NHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           ++++G  P+  +Y+ ++N Y      +    +A  +  ++        + T +  I    
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG---EAELFGEAIHLFRLMQRKEIEQ 262
           ++   + A  L  ++       +  S+N +  +YG     E+F EA+ +   M+   I  
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDV--IYGFCKRGEVF-EALQVLEEMKSSGILP 424

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
           +V +Y+ +I  +    +  K  +LM+EM++  I+P+ ++Y+++I    K   L  A  +F
Sbjct: 425 DVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIF 484

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA---- 378
             + +S  + D  +Y+T+I  +   G +  A +LL E+     +P   +   L R     
Sbjct: 485 HSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKL 544

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G  ++A  VF      G   D      +++   R   +   + + E  +  G+  + H  
Sbjct: 545 GLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSY 604

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDS 498
             ++    K    E A +L   M +   + S   +  ++S +  + +F    +LF R+  
Sbjct: 605 NAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVK 664

Query: 499 DSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                    + ++  I+  ++++++A  I   M +R
Sbjct: 665 VGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 146/322 (45%), Gaps = 10/322 (3%)

Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
           Q V+   V +  L++++  N     AL VF+    V    D+ TCN ++    + +  + 
Sbjct: 241 QHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEF 300

Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVY-----GEAELFGEAIHLFRLMQRKEIEQNVVTY 267
             R+F  ++  G  P++ +Y  ++  Y      +A +   A+ L ++ +  E +  VVTY
Sbjct: 301 VRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGE-KPTVVTY 359

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           +T I    K    E A  L++ +       N+ +++ +I  + K G++  A  + ++++S
Sbjct: 360 STYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKS 419

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
           SG+  D   Y  +I A+   G V     L+ E+     +P+ +   + I  L +   ++ 
Sbjct: 420 SGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQN 479

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +F     +    D +V+  +I+ F       + I++ E+M      P +     ++ 
Sbjct: 480 AVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIR 539

Query: 444 SYGKLREFETADDLYSEMQEEG 465
            Y KL  F+ A ++++ M  +G
Sbjct: 540 GYYKLGLFDQALEVFNAMLRDG 561


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 228/476 (47%), Gaps = 8/476 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            P +F ++ +L  ++R   +  A  LF ++  +GI P   T + LI C+  +     A S
Sbjct: 52  PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS 111

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L  + +     ++V ++ LI         SKA++    L + G   D  +Y ++IN   
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K    ++A  L+++M E  V+P+ ++YST+++   ++    +AL +F+ +      +D+ 
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I     +   ++A RL   M +  I+P   ++N L+    +     EA  +F +M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            ++  + ++VTYN +++ +  S    +A  L   M  RG+EP+ + Y+ +I  + K   +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
           D A +LF+++R   +  +   Y ++I    ++G ++  + L+ E+    + P+ +     
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           +    ++   E+A  +FRQ    G   D  ++  ++E F + +K     E  + +   G 
Sbjct: 412 LDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGC 470

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
            P+     +++N+  K   F+ A  L S+M +  C   D V F+  ++ GA ++ N
Sbjct: 471 CPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCP-PDAVTFE--TIIGALQERN 523



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 224/501 (44%), Gaps = 5/501 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M ++   P  + +  L+    + G + +AIS   Q+    ++  +   + LI     
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
            +  S A S+   +   G  P++V +NT+IN F    +  +A     ++  +G   D  S
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y +L+N   +N +  +AL +  +M E     +L T + +ID   +  +  DA RLF  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI   VV+YN+L+        + EA  L  +M R  I  +  T+N ++    K     
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +A  +   M  RG +P+ +TY+ ++  +  +  +  A  LF ++   G+E D + Y  +I
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++ +V  A  L  E+R  N +P      + I  L + GR+     +  +  D G+ 
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            DI  +   ++ F ++K Y   I +F ++   G +PD ++  +++ ++ K  + + A++ 
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
              +   GC  + + +  M++       F+   +L  ++D +           + G  + 
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQE 521

Query: 518 ANRLNDASRIMNRMNKRRTFN 538
            N  + A ++   M +R   N
Sbjct: 522 RNETDKAEKLRLEMIERGLVN 542



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 206/453 (45%), Gaps = 32/453 (7%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P++  +N ++           A     ++  +G   D ++Y +LI    K G    A+
Sbjct: 121 FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDAL 180

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             LQ+ME+D V  +L+ YS +I+   K    + A+ +FS + S GI+ D+VAYN++I+  
Sbjct: 181 QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGC 240

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                ++EA  L+  M    + PD  +++ L++   +  + VEA  VFA M +     D+
Sbjct: 241 CSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDI 300

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +++ +   +   +A  LF  M K G++P V++YN L+  Y + ++  EA+ LF+ 
Sbjct: 301 VTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKE 360

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           ++ K +  N+ TYN++I    K         L+ EM +RG  P+ +TY+  +  + K+  
Sbjct: 361 IRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKP 420

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
            ++A  LF+++   G+  D  +Y  ++  +                              
Sbjct: 421 YEKAISLFRQI-VQGIWPDFYMYDVIVENF------------------------------ 449

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             +  +++ A    +     G   ++  +  MI    ++  +   + +  KM      PD
Sbjct: 450 -CKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +     ++ +  +  E + A+ L  EM E G V
Sbjct: 509 AVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 17/365 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P++  Y+ V+  + + +    A  LF  +  RGI  D   Y++LI      G +
Sbjct: 187 EEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQW 246

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A   L  M +  ++ D   ++ L++   K     +A  +F+ +   G  PD+V YN +
Sbjct: 247 REATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNAL 306

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +  F  +    EAR L   M ++G++PD ++Y+ L+N Y +     EA+ +F E+   N 
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +L T N +ID   +L        L   M   G  P +V+YN  L  + +++ + +AI 
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           LFR + +  I  +   Y+ +++ + K  + + A   +Q +   G  PN  TY+ +I    
Sbjct: 427 LFRQIVQG-IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE----------------RVGLVAHAK 354
           K    D A  L  K+  +    D V ++T+I A +                  GLV    
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA 545

Query: 355 RLLHE 359
           RL+HE
Sbjct: 546 RLVHE 550


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 209/455 (45%), Gaps = 8/455 (1%)

Query: 8   WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
           W++ E + SP   A   +L  ++R ++++     +  M  RG+ PD + Y  L  C  K+
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYS-NLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
           G++      L +M    +  ++ +Y+  +++L R  +   +A  +F  +K  G++P+L  
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD-NKMEEAEKMFELMKKHGVLPNLYT 271

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y+ MI+ + K    ++A  L +E+    + P+ V + TL++ + +  + V A S+F  M 
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           +     +L   N +I  + +     +A  L   M  + + P V +Y  L+      +   
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
           EA  LF+ M+ + I  +  TYN++I  Y K    E+A +L  EM   G+EPN IT+ST+I
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
             +     +  A  L+ ++   G+  D V Y  +I A+ +   +  A RL  ++ +    
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511

Query: 367 PRETAITILA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           P +     L     + GR+  A   +++        +   F C+IE   +N         
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
           F  MRS G  PD  I + V    G L+E    D +
Sbjct: 572 FSDMRSCGITPD--ICSYVSMLKGHLQEKRITDTM 604



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 174/396 (43%), Gaps = 35/396 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG-------- 68
           P+V+ Y + + ++ R  + E A  +F+ M++ G+ P+ YTYS +I  + K G        
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291

Query: 69  ------------------MFD---------SAISWLQQMEQDRVSGDLVLYSNLIELARK 101
                             + D         +A S    M +  V  +L +Y+ LI    K
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
             +  +A+ + S ++S  + PD+  Y  +IN         EA  L ++M+ + + P + +
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++L++ Y + +   +AL + +EM       ++ T + +ID Y  +   K A  L++ M 
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P VV+Y  L+  + +     EA+ L+  M    I  N  T+  ++  + K     
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A +  QE   +    N + ++ +I    + G + RA+  F  +RS G+  D   Y +M+
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591

Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
             + +   +     L  ++ +   +P      +LAR
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E    SP VF Y +++  +    Q   A+ LF +M+   I P   TY++LI  + KE   
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+    +M    V  +++ +S LI+    + D   A+ ++  +   GIVPD+V Y  +
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   K    KEA  L  +M E G+ P+  +++ L++ + +  +   A+  + E N+   
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +      +I+   Q      A R F  MR  GI P + SY ++L+ +           
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH----------- 594

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               +Q K I   ++    MIK                     GI PN +    +   + 
Sbjct: 595 ----LQEKRITDTMMLQCDMIKT--------------------GILPNLLVNQLLARFYQ 630

Query: 311 KAGKLDRAAML 321
             G +  A  L
Sbjct: 631 ANGYVKSACFL 641



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 187/440 (42%), Gaps = 55/440 (12%)

Query: 37  LAHGLFDEMRQRGIAPDRYT---YSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS 93
           ++H LF+ +    I   +++   +S LI  F + G+F+ A+   ++M+    S   +   
Sbjct: 114 MSHRLFNALED--IQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSIL 171

Query: 94  NLIELARKLS----DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
           N +   R+      DY   IS        G+VPD+  Y  +     K  L+ +   L++E
Sbjct: 172 NGLVRRRRFDSVWVDYQLMIS-------RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDE 224

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M   G+KP+   Y+    +Y+                     LDL   N M         
Sbjct: 225 MTSLGIKPNVYIYT----IYI---------------------LDLCRDNKM--------- 250

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            ++A+++F  M+K G+ P++ +Y+ ++  Y +     +A  L++ +   E+  NVV + T
Sbjct: 251 -EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  + K+ E   A +L   M   G++PN   Y+ +I    K+G +  A  L  ++ S  
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEAT 385
           +  D   Y  +I        VA A RL  +++     P       L     +   +E+A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +  +   +G   +I  F  +I+ +   +     + ++ +M   G  PD      +++++
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 446 GKLREFETADDLYSEMQEEG 465
            K    + A  LYS+M E G
Sbjct: 490 FKEANMKEALRLYSDMLEAG 509



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/269 (20%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           E+A  + +EM+     P++    +I+    +  + D   + +Q + S G+  D  +Y  +
Sbjct: 149 EEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVL 205

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
                + GL +  ++LL E+     +PN       I  L R  ++EEA  +F      G 
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265

Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
           + ++  +  MI+ + +         +++++  A   P+  +   +++ + K RE  TA  
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARS 325

Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL-----FERLDSDSNINKKELHHVV 511
           L+  M + G      ++     ++G  K  NMLE++      E L+   ++    +  ++
Sbjct: 326 LFVHMVKFG--VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI--LI 381

Query: 512 AGIYERANRLNDASRIMNRMNKRRTFNSS 540
            G+    +++ +A+R+  +M   R F SS
Sbjct: 382 NGLCIE-DQVAEANRLFQKMKNERIFPSS 409


>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 608

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 202/426 (47%), Gaps = 6/426 (1%)

Query: 26  LRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           L N+L  K +   A+ +FD + + G  P   TY+TL+    K   F+S    + ++E++ 
Sbjct: 64  LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           +  D +LY+ +I    +  +  +A+ IF ++K +G  P    +NT+I  +G A   +E  
Sbjct: 124 MKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGL 183

Query: 145 LLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDV 203
            ++  M   G VKP+  +Y+ L+  +       EA +V  +M       D+ T NI+   
Sbjct: 184 KMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARA 243

Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
           Y Q      A+ L   M+   + P+  +   ++  Y +     EA+     M+   +  N
Sbjct: 244 YAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPN 303

Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
           +V +N++IK +    + +     +  M+  G++P+ IT+STI+  W  AG +D+   +F 
Sbjct: 304 LVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFN 363

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAG 379
            +  +G+E D   +  +   Y R G   +A+ +L  + +    PN +   T I+    AG
Sbjct: 364 DMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAG 423

Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIA 439
           ++E A  V+ +  + G   ++  F  +I  ++  ++     E+ + M   G FP+   I 
Sbjct: 424 KMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQ 483

Query: 440 LVLNSY 445
           LV +++
Sbjct: 484 LVADAW 489



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 1/371 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P    YN ++     +   + A  +F +M+  G  P   T++TLI  +G  G  
Sbjct: 120 EENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKP 179

Query: 71  DSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           +  +  L  M  D  V  +   Y+ L+       +  +A ++  ++ +SGI PD+V YN 
Sbjct: 180 EEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNI 239

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +   + +      A  LI EM+ + V P+  +   ++N Y +    +EAL     M E+ 
Sbjct: 240 LARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELG 299

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              +L   N +I  +  +      D     M + G+ P V++++T++  +  A L  +  
Sbjct: 300 VHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQ 359

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            +F  M +  IE ++  ++ + K Y ++ E E A +++  M   G+ PN +  +TII+ W
Sbjct: 360 EIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGW 419

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
             AGK++ A M+++K+   G+  +   ++T+I  Y        A+ LL  + +    P +
Sbjct: 420 CSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEK 479

Query: 370 TAITILARAGR 380
           + I ++A A R
Sbjct: 480 STIQLVADAWR 490



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 192/422 (45%), Gaps = 5/422 (1%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           IF  L   G  P L+ Y T++    K K F+   LLI ++ E G+KPD++ Y+ ++N + 
Sbjct: 80  IFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFS 139

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSV 229
           E+    EA+ +F +M +  C    +T N +I  YG     ++  ++   M   G + P+ 
Sbjct: 140 ESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPND 199

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
            +YN L+R +   +   EA ++   M    I+ +VVTYN + + Y +  E  +A +L+ E
Sbjct: 200 RTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILE 259

Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV-- 347
           MQ   + PN  T   I+  + K G +  A     +++  GV  + V++ ++I  +  +  
Sbjct: 260 MQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITD 319

Query: 348 -GLVAHAKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
              V  A  L+ E   +P+ I   T +   + AG +++   +F     AG   DI  F  
Sbjct: 320 TDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSI 379

Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           + + + R  +  N   V   M  +G  P+  I   +++ +    + E A  +Y +M E G
Sbjct: 380 LAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIG 439

Query: 466 CVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDAS 525
              + +    ++  Y   +     E L + ++      +K    +VA  +     L +A 
Sbjct: 440 ISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGLLCEAK 499

Query: 526 RI 527
           RI
Sbjct: 500 RI 501



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 148/317 (46%), Gaps = 6/317 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF 64
           +L  ++ +    P+   YN+++R     K  E A  +  +M   GI PD  TY+ L   +
Sbjct: 185 MLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAY 244

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            ++G    A   + +M+ ++V+ +      ++    K  +  +A+    R+K  G+ P+L
Sbjct: 245 AQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNL 304

Query: 125 VAYNTMINVF---GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           V +N++I  F          EA  L+EE    GVKPD +++ST++N +       +   +
Sbjct: 305 VIFNSLIKGFLDITDTDGVDEALTLMEEY---GVKPDVITFSTIMNAWSSAGLMDKCQEI 361

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +M +     D+   +I+   Y +    ++A+ +  SM K G+ P+VV   T++  +  
Sbjct: 362 FNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCS 421

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
           A     A  ++  M    I  N+ T+ T+I  Y ++ +  KA  L+Q M+ +G+ P   T
Sbjct: 422 AGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKST 481

Query: 302 YSTIIAIWGKAGKLDRA 318
              +   W   G L  A
Sbjct: 482 IQLVADAWRNIGLLCEA 498



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 35/278 (12%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN++ R   +  +   A  L  EM+   +AP+  T   ++  + KEG    A+ +
Sbjct: 232 PDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRF 291

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSD-------------------------------- 104
           + +M++  V  +LV++++LI+    ++D                                
Sbjct: 292 VYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSS 351

Query: 105 ---YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
                K   IF+ +  +GI PD+ A++ +   + +A   + A  ++  M + GV+P+ V 
Sbjct: 352 AGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVI 411

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
            +T+++ +    K   A  V+ +M E+    +L T   +I  Y +      A+ L   M 
Sbjct: 412 CTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLME 471

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           + G+ P   +   +   +    L  EA  + ++ +  E
Sbjct: 472 EKGVFPEKSTIQLVADAWRNIGLLCEAKRITKIEEEDE 509


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 212/476 (44%), Gaps = 34/476 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN++L+ +  A + + AH LFDEM      PD  TY  ++  +      ++AI  L +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +  + V Y+++I L       S A+ +   +   G+V D   + T+++ F +    
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             AR   +EM+++G+  D V+Y+ L+N      +  EA  V  EM +    +D  T  ++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID Y ++    +A  +   M +  + P+VV+Y  L     +      A  L   M  K +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E N+ TYN++I    K+   E+A   M +M   G++P+  TY+TII    ++ +LDRA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L Q++   G++   V Y  ++  +   G V   KRLL  + + N  P  T    L +   
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           IE                               K   +  E+++ M S    P+ +   +
Sbjct: 612 IE-------------------------------KNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           ++  + K R  + A   +SEM E+G   +   +  ++ L   +K F     LFE++
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 194/421 (46%), Gaps = 4/421 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P V  Y +++       + E A  L  EM  RG+  +   Y+++I     EG  
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  ++ M    V  D  +++ ++    +  D + A + F  ++  G+  D V Y  +
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   +A   KEA  +++EM ++G+  D V+Y+ L++ Y +  K  EA  V  +M +   
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T   + D   +      A+ L   M   G++ ++ +YN+L+    +A    +A+ 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M    ++ +V TY T+I    +S E ++A +L+QEM ++GI+P  +TY+ ++  + 
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            +G+++    L + +    +  +   Y +++  Y     +     +   +     +P E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              IL     +A  ++EA +   +  + G     S +  +I L ++ KK+     +FEKM
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 427 R 427
           R
Sbjct: 697 R 697



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 153/316 (48%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  ++  + RA + + A  +  EM  +G+  D  TY+ LI  + K G    A     +M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           Q RV+ ++V Y+ L +   K  D   A  +   + S G+  ++  YN++IN   KA   +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A   + +M E G+KPD  +Y+T++    ++ +   A S+  EM +      + T N+++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +      +   RL   M +  I P+  +YN+L++ Y   +       +++ M  +E+ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N  TYN +IK + K+   ++A     EM  +G    A +Y+ +I +  K  K   A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 322 FQKLRSSGVEIDPVLY 337
           F+K+R   +  +P +Y
Sbjct: 693 FEKMRKERLTAEPDVY 708



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 6/344 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +  V+    R      A   FDEM++RG+A D  TY+ LI    + G    A   LQ+ME
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  D V Y+ LI+   K+   ++A  + +++    + P++V Y  + +   K     
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L+ EM  +G++ +  +Y++L+N   +     +A+    +M+E     D+ T   +I
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 202 DVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
              G L  +K+ DR   L   M   GI P++V+YN L+  +  +        L   M  K
Sbjct: 538 ---GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  N  TYN+++K Y      +  T + + M ++ + PN  TY+ +I    KA  +  A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
                ++   G  +    Y  +I    +      A+RL  ++R+
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/426 (20%), Positives = 186/426 (43%), Gaps = 19/426 (4%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A+ +F  L       +  +YN ++     A   K+A  L +EM      PD V+Y  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMV 292

Query: 167 NLYVENHKFVEALSVFAEMN----EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + Y    +   A+ + +EM     E+N P+  T+   ++   GQ+    DA R+   M  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELN-PVAYTSVIALLCDEGQV---SDAVRVVEDMVM 348

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+      + T++  +        A + F  MQ++ +  + VTY  +I    ++ E ++
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  ++QEM+++G++ +A+TY+ +I  + K GK+  A ++  K+    V  + V Y  +  
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 343 AYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              + G V  A  LLHE+       N     + I  L +AG +E+A        +AG   
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +I    ++K+      + ++M   G  P      +++N +      E    L 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
             M E+    +   +  ++  Y   K+      +++ + S   +  +  ++++   + +A
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 519 NRLNDA 524
             + +A
Sbjct: 649 RNMKEA 654



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 121/262 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R +P+V  Y  +   + +      A+ L  EM  +G+  + +TY++LI    K G  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  +  M++  +  D+  Y+ +I    +  +  +A S+   +   GI P +V YN ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F  +   +  + L+E M E+ + P+T +Y++L+  Y           ++  M      
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T NI+I  + +    K+A      M + G   +  SYN L+R+  + + F EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 252 FRLMQRKEIEQNVVTYNTMIKI 273
           F  M+++ +      YN  I +
Sbjct: 693 FEKMRKERLTAEPDVYNFYIDL 714


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/520 (21%), Positives = 236/520 (45%), Gaps = 39/520 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +L  +  +    P+ F+YNVV+  + RA +   A  +FDEM +R + P+  TY+T+I
Sbjct: 183 AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 242

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
                    D  I            GDL       E   +L D         ++   G+ 
Sbjct: 243 ---------DGHIK----------GGDL-------EAGFRLRD---------QMVCHGLK 267

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
           P+ + YN +++   +A    E   L++EM  Q + PD  +YS L +    N      LS+
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 327

Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
           F +  +    +   TC+I+++   +      A+ +  S+   G+ P+ V YNTL+  Y +
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387

Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
                 A   F  M+ + I+ + +TYN +I    K+     A +L+ EMQ+ G+ P   T
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447

Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
           ++T+I  +G+ G+L++  ++  +++ +G++ + V Y +++ A+ + G +  A  +L ++ 
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507

Query: 362 QPNTIPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
             + +P       +  A    G  ++A  +  +    G    I  +  +I+      + +
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567

Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
              E+   + +    PD+     ++++       + A DL   M + G   + + + Q++
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 627

Query: 478 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           S  G     N +E L++++  ++ +    +H+++   Y +
Sbjct: 628 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 166/394 (42%), Gaps = 40/394 (10%)

Query: 112 FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM-REQGVKPDTVSYSTLLNLYV 170
           F  L S+G  PD  A+N  +     A    EA  ++  M R+    P+  SY+ ++    
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVV 230
              +  +A+ VF EM E     +  T N MID + +    +   RL   M   G+ P+ +
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN-------------TMIKIYGKS 277
           +YN LL     A   GE   L   M  +++  +  TY+              M+ ++GK 
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 278 LEH----------------------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           L++                        A  ++Q + N G+ P  + Y+T+I  + + G+L
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETA 371
           + A   F +++S  ++ D + Y  +I    +   + +A+ LL E++     P      T 
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I    R G++E+   V  +  + G   ++  +G ++  F +N K    + + + M     
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
            P++ +   ++++Y +    + A  L  +M+  G
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545


>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
          Length = 1443

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 204/426 (47%), Gaps = 4/426 (0%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           AR   +V  +N ++    R+ +++ A  L D MR + I PD  +++TLI    K G   +
Sbjct: 215 AREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAA 274

Query: 73  --AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  L ++ Q  +  D + Y+ LI    + S+   A+++F  + +S   PDL  YN M
Sbjct: 275 GVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAM 334

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           ++V G+    +EA L+ +E+ E+G +PD V+Y++LL  + +         V  E+ +   
Sbjct: 335 VSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGF 394

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             D  T N MI +YG++     A  L+  MR +G  P  V+Y  L+   G+ +   EA  
Sbjct: 395 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 454

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +   M    ++  +VT++ +I  Y KS   + A      M   G++P+ + Y  ++ ++ 
Sbjct: 455 VLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 514

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           ++ +  +  +L++ +   G + D  LYQ ++ A  +       + ++ ++     +    
Sbjct: 515 RSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLV 574

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             +IL +A  I +   + ++A   G   D      +++ + +  K+   + + E +R   
Sbjct: 575 ISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQ-- 632

Query: 431 YFPDSH 436
           + P+SH
Sbjct: 633 HVPNSH 638



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 245/556 (44%), Gaps = 52/556 (9%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHG----LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           P + ++N ++    RAK   LA G    L  E+RQ G+ PD  TY+TLI+   +    D 
Sbjct: 254 PDLVSFNTLINA--RAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDD 311

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A++  ++M       DL  Y+ ++ +  +     +A  +F  L   G  PD V YN+++ 
Sbjct: 312 AVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLY 371

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
            F K    +    + EE+ + G + D ++Y+T++++Y +  +   AL ++ EM  + C  
Sbjct: 372 AFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTP 431

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T  +++D  G++D   +A ++   M   G+ P++V+++ L+  Y ++    +A   F
Sbjct: 432 DAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTF 491

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M    ++ + + Y  M+ ++ +S E  K   L + M   G +P+   Y  ++A   K 
Sbjct: 492 DRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKG 551

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIV------------------------------ 342
            + D    + Q + +   E++P++  ++++                              
Sbjct: 552 NEHDEIEGVIQDMEAV-FEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSI 610

Query: 343 --AYERVGLVAHAKRLLHELRQ--PNT--IPRETAITILARAGRIEEATWVF--RQAFDA 394
             AYE++G       LL  +RQ  PN+  +  E +I +L + G+I +A   +  +Q    
Sbjct: 611 LDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKR 670

Query: 395 GEV-KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
           G   +D  ++  +I      + +    +VF  M+  G  P   +    +    +L   ET
Sbjct: 671 GSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPET 730

Query: 454 ADDLYSEMQEEGCVFSD-QVHFQMLSLYGARKDFNMLESLFERLDSDSNINKK---ELHH 509
           A  L  +        +       M+  YG  K +   E+  + L  +S ++++    L H
Sbjct: 731 AYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIH 790

Query: 510 VVA--GIYERANRLND 523
             A  G+YE A  + D
Sbjct: 791 AYAESGLYEHARAIFD 806



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 182/361 (50%), Gaps = 8/361 (2%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
           A  +F R    G    +  +N M+ V+ ++  F +AR L++ MR+Q ++PD VS++TL+N
Sbjct: 207 AEDVFLRFAREGAT--VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264

Query: 168 LYVENHKFVE--ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
              ++       AL +  E+ +     D  T N +I    Q     DA  +F  M     
Sbjct: 265 ARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC 324

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
            P + +YN ++ V+G      EA  +F+ +  K  + + VTYN+++  + K  + E+   
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVER 384

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
           + +E+   G   + ITY+T+I ++GK G+LD A  L+ ++R+ G   D V Y  ++ +  
Sbjct: 385 VCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLG 444

Query: 346 RVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
           ++  ++ A ++L E+     +P  +     I   A++GR ++A   F +  ++G   D  
Sbjct: 445 KMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRL 504

Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
            +  M+++F+R+ +   ++ ++  M   GY PD  +  ++L +  K  E +  + +  +M
Sbjct: 505 AYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 564

Query: 462 Q 462
           +
Sbjct: 565 E 565



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 178/367 (48%), Gaps = 6/367 (1%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            +N ++     +  +E A  +FD M ++G  P   + + ++     +G  D     +Q++ 
Sbjct: 785  WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQEL- 843

Query: 82   QD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
            QD   ++S   VL   ++E   K  D  + + I++ +K++G +P++  Y  MI++    K
Sbjct: 844  QDLDIKISKSTVLL--MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 901

Query: 139  LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
             F++  L++ EM   G KPD V  +TLL +Y     F   + V+  + E     D  T N
Sbjct: 902  RFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 961

Query: 199  IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
             +I +Y +    ++   L + M K G+ P + SY  LL   G+A+L+ +A  LF  M+ K
Sbjct: 962  TLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTK 1021

Query: 259  EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
                N   Y+ M+KIY  +  H KA +L+  M+  GIEP   T   ++  +G +G  D A
Sbjct: 1022 GYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEA 1081

Query: 319  AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
              +   L+SS +EI  + Y T++ AY R    +     L E+++    P     T   RA
Sbjct: 1082 EKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 1141

Query: 379  GRIEEAT 385
              + E T
Sbjct: 1142 ASLCEQT 1148



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 154/340 (45%), Gaps = 6/340 (1%)

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF--GEAIHLFRLM 255
           N M+ VY +     DA +L  +MR   I+P +VS+NTL+    ++     G A+ L   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEV 284

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
           ++  +  + +TYNT+I    +    + A  + +EM      P+  TY+ ++++ G+ GK 
Sbjct: 285 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 344

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETA 371
             A ++F++L   G + D V Y +++ A+ + G V   +R+  EL +     + I   T 
Sbjct: 345 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 404

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I +  + GR++ A  ++ +    G   D   +  +++   +  + +   +V E+M  AG 
Sbjct: 405 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 464

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
            P     + ++ +Y K    + A+  +  M E G       +  ML ++    +   L  
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 524

Query: 492 LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
           L+  +  D       L+ V+     + N  ++   ++  M
Sbjct: 525 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 564



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/455 (21%), Positives = 199/455 (43%), Gaps = 8/455 (1%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYS-TLITCFGKEGMFDSAIS 75
            PS   +   +    R    E A+ L D+  +  I+ +  +    +I  +GK  ++  A +
Sbjct: 710  PSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAEN 769

Query: 76   WLQQMEQDRVSG-DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
            +++ ++Q+  SG D  +++ LI    +   Y  A +IF  +   G +P + + N M+   
Sbjct: 770  FVKGLKQE--SGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 827

Query: 135  GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
                   E  ++++E+++  +K    +   +L  + +     E + ++  M       ++
Sbjct: 828  IVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNM 887

Query: 195  TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
                IMI +       +D + +   M   G  P +V  NTLL +Y     F   I ++  
Sbjct: 888  HLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHS 947

Query: 255  MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
            +    +E +  TYNT+I +Y ++   E+   L+ EM  RG+ P   +Y  ++A  GKA  
Sbjct: 948  ILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKL 1007

Query: 315  LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
             ++A +LF+++R+ G  ++  +Y  M+  Y      + A+ LL  +++    P    + I
Sbjct: 1008 WEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 1067

Query: 375  L----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
            L      +G  +EA  V      +        +  +++ + RN+ Y+  I    +M+  G
Sbjct: 1068 LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 1127

Query: 431  YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
              PD  +    + +     + + A  L   +Q+ G
Sbjct: 1128 VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1162



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 102/500 (20%), Positives = 218/500 (43%), Gaps = 23/500 (4%)

Query: 48   RGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSK 107
            +G  PD  +  +++  + K G  +  +S L+ + Q   +   ++    I L  K      
Sbjct: 598  QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVD 657

Query: 108  AISIFSR---LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
            AI  +SR   LK      D   Y  +I    +A+LF EA  +  +M+  G+ P    + +
Sbjct: 658  AIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPS 717

Query: 165  LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI-MIDVYGQLDMAKDADRLFWSMRK- 222
             +           A  +  +    +  L++ +C + MI+ YG+L + + A+     +++ 
Sbjct: 718  FIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQE 777

Query: 223  MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
             G+D  +  +N L+  Y E+ L+  A  +F +M +K     V + N M++        ++
Sbjct: 778  SGVDRRI--WNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDE 835

Query: 283  ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
               ++QE+Q+  I+ +  T   ++  + KAG +     ++  ++++G   +  LY+ MI 
Sbjct: 836  LYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMI- 894

Query: 343  AYERVGLVAHAKR------LLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
                  L+ H KR      ++ E+     +P+ +   T + +    G  +    V+    
Sbjct: 895  -----SLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSIL 949

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
            +AG   D   +  +I ++SRN +      +  +M   G  P      ++L + GK + +E
Sbjct: 950  EAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWE 1009

Query: 453  TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
             AD L+ EM+ +G   +  ++  M+ +Y   ++ +  E L   +  D         H++ 
Sbjct: 1010 QADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILM 1069

Query: 513  GIYERANRLNDASRIMNRMN 532
              Y  +   ++A +++N + 
Sbjct: 1070 TSYGTSGHPDEAEKVLNSLK 1089



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 141/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P+ + Y  +I+       F      + +ME      DLV+ + L+ +  
Sbjct: 874  IYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYT 933

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
               ++ + I ++  +  +G+ PD   YNT+I ++ +    +E   L+ EM ++G+ P   
Sbjct: 934  GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLE 993

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            SY  LL    +   + +A  +F EM      L+ +  ++M+ +Y        A+ L  +M
Sbjct: 994  SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 1053

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG +    EA  +   ++   +E + + Y+T++  Y ++ ++
Sbjct: 1054 KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDY 1113

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
                  + EM+  G+EP+   +++ I       + D A +L + L+  G ++
Sbjct: 1114 SLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDL 1165



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 129/284 (45%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y +++  +   K++     +  EM   G  PD    +TL+  +   G FD 
Sbjct: 881  AGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDR 940

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             I     + +  +  D   Y+ LI +  +     +  ++   +   G+ P L +Y  ++ 
Sbjct: 941  TIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLA 1000

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
              GKAKL+++A LL EEMR +G + +   Y  ++ +Y       +A  + + M E     
Sbjct: 1001 ASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEP 1060

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + T +I++  YG      +A+++  S++   ++ S + Y+T+L  Y     +   I   
Sbjct: 1061 TIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKL 1120

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+R  +E +   + + I+      + + A  L++ +Q+ G +
Sbjct: 1121 LEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1164



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 93/215 (43%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            EA   P    YN ++    R  + E    L  EM +RG+ P   +Y  L+   GK  +++
Sbjct: 950  EAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWE 1009

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A    ++M       +  +Y  ++++ R   ++SKA  + S +K  GI P +   + ++
Sbjct: 1010 QADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILM 1069

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
              +G +    EA  ++  ++   ++  T+ YST+L+ Y+ N  +   ++   EM      
Sbjct: 1070 TSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVE 1129

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
             D       I      +   DA  L  S++  G D
Sbjct: 1130 PDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1164


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 203/433 (46%), Gaps = 9/433 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P    +N V+  + +  +   A  + + M  RG APD  TY  L+    K G  D+A   
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
             ++ +     ++V+++ LI           A ++ S + +S GIVPD+  YN++I  + 
Sbjct: 345 FYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K  L   A  ++ +MR +G KP+  SY+ L++ + +  K  EA +V  EM+      +  
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
             N +I  + +     +A  +F  M + G  P V ++N+L+    E +    A+ L R M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  N VTYNT+I  + +  E ++A  L+ EM  +G   + ITY+++I    +AG++
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETA 371
           D+A  LF+K+   G     +    +I    R G+V  A     E+      P+ +   + 
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L RAGRIE+   +FR+    G   D   F  ++    +     +   + ++    G+
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700

Query: 432 FPDSHIIALVLNS 444
            P+    +++L S
Sbjct: 701 VPNHRTWSILLQS 713



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 205/458 (44%), Gaps = 36/458 (7%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P++F + VV++      + + A  L  +M + G  P+   Y TLI    K    + A
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD---------- 123
           +  L++M       D   ++++I    K    ++A  + +R+   G  PD          
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331

Query: 124 ---------------------LVAYNTMINVFGKAKLFKEARLLIEEM-REQGVKPDTVS 161
                                +V +NT+I+ F       +A+ ++ +M    G+ PD  +
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y++L+  Y +      AL V  +M    C  ++ +  I++D + +L    +A  +   M 
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P+ V +N L+  + +     EA+ +FR M RK  + +V T+N++I    +  E +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A  L+++M + G+  N +TY+T+I  + + G++  A  L  ++   G  +D + Y ++I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 342 VAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
               R G V  A+ L  ++      P+ I     I  L R+G +EEA    ++    G  
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            DI  F  +I    R  +  + + +F K+++ G  PD+
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 213/468 (45%), Gaps = 14/468 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+  +YNVVL  ++     ++A  +F +M  R I P  +T+  ++  F      DSA+S 
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ M +     + V+Y  LI    K +  ++A+ +   +   G VPD   +N +I    K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  ++  M  +G  PD ++Y  L+N   +  +   A  +F  + +     ++  
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVI 355

Query: 197 CNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            N +I     +G+LD AK    L   +   GI P V +YN+L+  Y +  L G A+ +  
Sbjct: 356 FNTLIHGFVTHGRLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M+ K  + NV +Y  ++  + K  + ++A N++ EM   G++PN + ++ +I+ + K  
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           ++  A  +F+++   G + D   + ++I     V  + HA  LL ++       NT+   
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    R G I+EA  +  +    G   D   +  +I+   R  +      +FEKM   
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593

Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
           G+ P +    +++N   +    E A +   EM   G    D V F  L
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSL 640



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/506 (20%), Positives = 216/506 (42%), Gaps = 10/506 (1%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           S+ +  W   +  Y  S   Y V++  +    +++    L  +M+  GI      + +++
Sbjct: 94  SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153

Query: 62  TCFGKEGMFDSAISWLQQMEQD-RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
             + K G        + +M            Y+ ++E+    + +  A ++F  + S  I
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
            P L  +  ++  F        A  L+ +M + G  P++V Y TL++   + ++  EAL 
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
           +  EM  + C  D  T N +I    + D   +A ++   M   G  P  ++Y  L+    
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM-QNRGIEPNA 299
           +      A  LF  + + EI    V +NT+I  +      + A  ++ +M  + GI P+ 
Sbjct: 334 KIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            TY+++I  + K G +  A  +   +R+ G + +   Y  ++  + ++G +  A  +L+E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449

Query: 360 LR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
           +     +PNT+     I+   +  RI EA  +FR+    G   D+  F  +I       +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509

Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
             + + +   M S G   ++     ++N++ +  E + A  L +EM  +G    +  +  
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569

Query: 476 MLSLYGARKDFNMLESLFERLDSDSN 501
           ++       + +   SLFE++  D +
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGH 595



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 179/406 (44%), Gaps = 8/406 (1%)

Query: 68  GMFDSAISW---LQQMEQD--RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS-SGIV 121
           G  DSA  W   L+  + D  R S   +    L +L     + S ++ +FS   S +G  
Sbjct: 49  GGTDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYR 108

Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
                Y  +I   G    FK    L+ +M+++G+      + +++  Y +     +   +
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168

Query: 182 FAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
             EM  V +C     + N+++++    +  K A  +F+ M    I P++ ++  +++ + 
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
                  A+ L R M +     N V Y T+I    K     +A  L++EM   G  P+A 
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           T++ +I    K  +++ AA +  ++   G   D + Y  ++    ++G V  AK L + +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348

Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDA-GEVKDISVFGCMIELFSRNKKYANV 419
            +P  +   T I      GR+++A  V      + G V D+  +  +I  + +       
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
           +EV   MR+ G  P+ +   ++++ + KL + + A ++ +EM  +G
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 35/152 (23%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           ++PS  + N+++  + R+   E A     EM  RG  PD  T+++LI    + G      
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG------ 648

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
                    R+   L ++       RKL             ++ GI PD V +NT+++  
Sbjct: 649 ---------RIEDGLTMF-------RKL-------------QAEGIPPDTVTFNTLMSWL 679

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
            K     +A LL++E  E G  P+  ++S LL
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711


>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 233/516 (45%), Gaps = 37/516 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+  +   E+    +V  YN ++    R  ++     L D MR+RG  PD  +++TLI
Sbjct: 232 ALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLI 291

Query: 62  TCFGKEGMFDS--AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
               K G  +   A+  L ++ +  +  D++ Y+ LI    + S+  +A+++FS ++S  
Sbjct: 292 NARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHR 351

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PDL  YN MI+V+G+    ++A  L +E+  +G  PD V+Y++LL  +       +  
Sbjct: 352 CQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVR 411

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM +     D  T N +I +YG+      A +++  M+  G +P  V+Y  L+   
Sbjct: 412 DICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSL 471

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+A    EA ++   M    ++  + TY+ +I  Y K+ + E+A      M+  GI+P+ 
Sbjct: 472 GKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDR 531

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS ++  + +  ++ +A  L+ ++   G   D  LY+ M+ A  R  +     R++ +
Sbjct: 532 LAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRD 591

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF---------------G 404
           + + + +  +   ++L + G  + A  + + A   G   D  +F                
Sbjct: 592 MEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSEA 651

Query: 405 CMIELFSRN--------------------KKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
           C +  FSR                     KK    +E +      G F    +   ++  
Sbjct: 652 CELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQE 711

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
             +   F+ A  ++S+M+  G   S+ ++  M+S+Y
Sbjct: 712 CIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVY 747



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 178/390 (45%), Gaps = 35/390 (8%)

Query: 31   RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF-------------------D 71
            + K W+ A  L   +RQR    DR  ++ LI  +   G +                   D
Sbjct: 786  KLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVD 845

Query: 72   SAISWLQQMEQDRVSGDL-VLYSNLIELARKLSDYSKAIS---------------IFSRL 115
            S    LQ +  DR   +L V+   L ++  K+S  S  ++               I++ +
Sbjct: 846  SVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGM 905

Query: 116  KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
            K++G  P +  Y  M+ +  K K  ++   ++ EM E G +PD    +++L LY+    F
Sbjct: 906  KAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDF 965

Query: 176  VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
                 ++ ++ + +   D  T N +I +Y +    ++   L   MR +G++P + +Y +L
Sbjct: 966  KSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSL 1025

Query: 236  LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
            +  + +  ++ +A  LF  ++    + +   Y+ M+K Y  S +H KA NL+  M+  GI
Sbjct: 1026 ITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGI 1085

Query: 296  EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 355
            EP   T   ++  +GK+G+ + A  + + LR++GV +D + Y ++I AY + G       
Sbjct: 1086 EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIE 1145

Query: 356  LLHELRQPNTIPRETAITILARAGRIEEAT 385
             L E+++    P     T   RA  + E T
Sbjct: 1146 KLTEMKEAGIEPDHRIWTCFIRAATLSEGT 1175



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/461 (20%), Positives = 204/461 (44%), Gaps = 41/461 (8%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            S   Y  +++  ++ + +++A  +F +MR  G+      Y  +++ + +  + ++A   L
Sbjct: 701  SCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLL 760

Query: 78   QQMEQDRV--SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               E++ +    D+ +Y +++E   KL  + KA S+   L+      D   +N +I+ + 
Sbjct: 761  YHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYA 820

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
             +  ++ AR +   M   G  P   S + LL   + + +  E   V  E+ ++   +  +
Sbjct: 821  FSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKS 880

Query: 196  TCNIMIDVYGQ-----------------------------------LDMAKDADRLFWSM 220
            +  + ++ + Q                                       +D + +   M
Sbjct: 881  SILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEM 940

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             + G  P +   N++L++Y   E F     +++ +Q   ++ +  TYNT+I +Y +    
Sbjct: 941  EEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRP 1000

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
            E+  +LM +M++ G+EP   TY ++I  + K    ++A  LF++LRS+G ++D   Y  M
Sbjct: 1001 EEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLM 1060

Query: 341  IVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGE 396
            +  Y   G    A+ LL  +++    P  + + +L     ++G+ EEA  V +     G 
Sbjct: 1061 MKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGV 1120

Query: 397  VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
            V D   +  +I+ + +   +   IE   +M+ AG  PD  I
Sbjct: 1121 VLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRI 1161



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 121/557 (21%), Positives = 237/557 (42%), Gaps = 45/557 (8%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P    Y V++ ++ +A + E A  +  EM   G+ P  +TYS LI  + K G  + A  
Sbjct: 458  NPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEE 517

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
                M +  +  D + YS +++   + ++  KA+ ++  +   G  PD   Y  M++   
Sbjct: 518  TFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALV 577

Query: 136  KAKLFKEARLLIEEMRE-QGVKPDTVSY-----------STLLNLYVEN-----HKF--- 175
            +  ++     +I +M E  G+ P  +S            + +L + + N     H+    
Sbjct: 578  RENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLS 637

Query: 176  -----------VEALSVFAEMNEVNCPLDLTTCN----IMIDVYGQLDMAKDADRLFWSM 220
                        EA  +  E +  + P D+        I++    +LD A +  R   S 
Sbjct: 638  IMSSYSSSARYSEACELL-EFSREHAPNDIQMITEALIIILCKAKKLDAALEEYR---SK 693

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
             ++G   S   Y +L++   + ELF  A  +F  M+   +E +   Y  M+ +Y +    
Sbjct: 694  GELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLP 753

Query: 281  EKATNLMQEMQNRGI--EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
            E A +L+   +  GI  + +   Y  I+  +GK     +A  L   LR    ++D  ++ 
Sbjct: 754  ETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWN 813

Query: 339  TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDA 394
             +I AY   G    A+ + + + +    P   ++  L +A     R+ E   V ++  D 
Sbjct: 814  ALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDM 873

Query: 395  GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
            G     S     +E F++      V +++  M++AGYFP  H+  ++L    K +     
Sbjct: 874  GLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDV 933

Query: 455  DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
            + +  EM+E G     Q+   +L LY   +DF  +  +++++   S    +E ++ +  +
Sbjct: 934  ETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIM 993

Query: 515  YERANRLNDASRIMNRM 531
            Y R  R  +   +MN+M
Sbjct: 994  YCRDRRPEEGFSLMNKM 1010



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 143/292 (48%)

Query: 41   LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
            +++ M+  G  P  + Y  ++    K        + L +ME+     DL + +++++L  
Sbjct: 901  IYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYL 960

Query: 101  KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
             + D+     I+ +++ + + PD   YNT+I ++ + +  +E   L+ +MR  G++P   
Sbjct: 961  GIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLD 1020

Query: 161  SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            +Y +L+  + +   + +A  +F E+      LD    ++M+  Y      + A+ L   M
Sbjct: 1021 TYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIM 1080

Query: 221  RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
            ++ GI+P++ + + L+  YG++    EA ++ + ++   +  + + Y+++I  Y K  + 
Sbjct: 1081 KESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDF 1140

Query: 281  EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
            +     + EM+  GIEP+   ++  I     +   + A +L   L+ +G ++
Sbjct: 1141 KAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGFDL 1192



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/543 (19%), Positives = 222/543 (40%), Gaps = 51/543 (9%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P   AY+V+L   LR  + + A GL+ EM + G  PD   Y  ++    +E M+D     
Sbjct: 529  PDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRI 588

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI---------------- 120
            ++ ME+       V+ S L+    K   Y  A  +     S+G                 
Sbjct: 589  IRDMEELSGMNPQVISSVLV----KGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSS 644

Query: 121  -----------------VPDLVAYNT--MINVFGKAKLFKEARLLIEEMR---EQGVKPD 158
                              P+ +   T  +I +  KAK    A   +EE R   E G    
Sbjct: 645  SARYSEACELLEFSREHAPNDIQMITEALIIILCKAKKLDAA---LEEYRSKGELGQFRS 701

Query: 159  TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
               Y +L+   ++N  F  A  +F++M              M+ VY ++D+ + A  L +
Sbjct: 702  CTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLY 761

Query: 219  SMRKMGI--DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
               K GI  D  +  Y  ++  YG+ +++ +A  L   ++++  + +   +N +I  Y  
Sbjct: 762  HAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAF 821

Query: 277  SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
            S  +E+A  +   M   G  P   + + ++       +L+   ++ Q+L+  G++I    
Sbjct: 822  SGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSS 881

Query: 337  YQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----ETAITILARAGRIEEATWVFRQAF 392
                + A+ + G +   +++ + ++     P        + +L +  R+ +   +  +  
Sbjct: 882  ILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEME 941

Query: 393  DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
            +AG   D+ +   +++L+   + + ++  +++K++ A   PD      ++  Y + R  E
Sbjct: 942  EAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPE 1001

Query: 453  TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
                L ++M+  G       +  +++ +  ++ +   E LFE L S+     +  +H++ 
Sbjct: 1002 EGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMM 1061

Query: 513  GIY 515
              Y
Sbjct: 1062 KTY 1064



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 2/201 (0%)

Query: 1    RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            +S+ I+    ++A   P    YN ++    R ++ E    L ++MR  G+ P   TY +L
Sbjct: 966  KSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSL 1025

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            IT F K+ M++ A    +++  +    D   Y  +++  R   D+ KA ++ + +K SGI
Sbjct: 1026 ITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGI 1085

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             P +   + ++  +GK+   +EA  +++ +R  GV  DT+ YS++++ Y++   F   + 
Sbjct: 1086 EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIE 1145

Query: 181  VFAEMNEVNCPLD--LTTCNI 199
               EM E     D  + TC I
Sbjct: 1146 KLTEMKEAGIEPDHRIWTCFI 1166



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 111/246 (45%)

Query: 11   EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
            EEA + P +   N +L+  L  + ++    ++ +++   + PD  TY+TLI  + ++   
Sbjct: 941  EEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRP 1000

Query: 71   DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
            +   S + +M    +   L  Y +LI    K   Y +A  +F  L+S+G   D   Y+ M
Sbjct: 1001 EEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLM 1060

Query: 131  INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
            +  +  +   ++A  L+  M+E G++P   +   L+  Y ++ +  EA +V   +     
Sbjct: 1061 MKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGV 1120

Query: 191  PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             LD    + +ID Y +    K        M++ GI+P    +   +R    +E   EAI 
Sbjct: 1121 VLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIV 1180

Query: 251  LFRLMQ 256
            L   +Q
Sbjct: 1181 LLNALQ 1186



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 40/275 (14%)

Query: 297 PNAITYSTIIAIWGKA----------------------------------GKLDRAAMLF 322
           PNA   +TI+ + GKA                                  G+  +   L 
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELL 272

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAH--AKRLLHELR----QPNTIPRETAITILA 376
             +R  G   D V + T+I A  + G +    A +LL+E+R    +P+ I   T I+  +
Sbjct: 273 DLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACS 332

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           R   +EEA  VF          D+  +  MI ++ R  +     E+F+++ S G+FPD+ 
Sbjct: 333 RESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAV 392

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
               +L ++ +    E   D+  EM + G    +  +  ++ +YG +   +    ++  +
Sbjct: 393 TYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDM 452

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            S         + V+     +A+++ +A+ +M+ M
Sbjct: 453 KSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEM 487



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%)

Query: 22   YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
            Y+++++    +     A  L   M++ GI P   T   L+  +GK G  + A + L+ + 
Sbjct: 1057 YHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLR 1116

Query: 82   QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
               V  D + YS++I+   K  D+   I   + +K +GI PD   +   I     ++   
Sbjct: 1117 TTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTN 1176

Query: 142  EARLLIEEMREQG 154
            EA +L+  +++ G
Sbjct: 1177 EAIVLLNALQDAG 1189



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 57/111 (51%)

Query: 9    INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
            I +E+   P++   ++++ +  ++ Q E A  +   +R  G+  D   YS++I  + K+G
Sbjct: 1079 IMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKG 1138

Query: 69   MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
             F + I  L +M++  +  D  +++  I  A      ++AI + + L+ +G
Sbjct: 1139 DFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAG 1189


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 122/548 (22%), Positives = 234/548 (42%), Gaps = 43/548 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +  ++P+V  Y  V+  + +A+  + A G+F  M  +G+ P+ +TY+ LI  +   G + 
Sbjct: 195 DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWK 254

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             +  LQ+M    +  D V+Y+ L++   K    ++A +IF  L   GI P +  Y  ++
Sbjct: 255 EVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILL 314

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + +       E    ++ M   GV PD   ++ + N Y +     EA+ +F +M +    
Sbjct: 315 HGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLS 374

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG----------- 240
             +     +ID   +L    DA   F  M   G+ P +  +++L  VYG           
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSL--VYGLCTVDKWEKAE 432

Query: 241 -------------EAELFG-------------EAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
                         A  F              EA  L  LM R ++  +V++YNT++  +
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDP 334
             +   ++A  L+  M + G++P+  TY+T++  + KA ++D A  LF+++   G+    
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552

Query: 335 VLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQ 390
           V Y T++    ++G    AK L    ++  R+ +       +  L R   ++EA  +F+ 
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612

Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
                   DI     MI    +  +  + +++F  + + G  PD     L+  +  K   
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672

Query: 451 FETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHV 510
            E  D+L+S M+E G   + ++   ++     R D         +LD  +   +     +
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSM 732

Query: 511 VAGIYERA 518
           +  IY RA
Sbjct: 733 LISIYSRA 740



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/498 (21%), Positives = 205/498 (41%), Gaps = 50/498 (10%)

Query: 18  SVFAYNVVLRNVLRAK---QWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFD 71
           SV  +N +L  V RA+     EL   LF+ M +     +AP   TY+ LI CF + G   
Sbjct: 50  SVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLK 109

Query: 72  SAISWLQQMEQDRVS-GDLVLYSNLIE--------------LARKLSDYSKAISIFS-RL 115
              +    + +   S  + V++  L++              L R++ ++   +++ S  +
Sbjct: 110 HGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNI 169

Query: 116 KSSGIV------------------------PDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
              G+                         P++V Y T+I+   KA++   A+ + + M 
Sbjct: 170 LLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI 229

Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
           ++GV+P+  +Y+ L++ Y+   K+ E + +  EM+      D     +++D   +     
Sbjct: 230 DKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCT 289

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
           +A  +F S+ + GI P V  Y  LL  Y       E      LM R  +  +   +N M 
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
             Y K    ++A ++  +M+ + + P  + Y  +I    K G++D A + F ++ + GV 
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409

Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWV 387
            D  ++ +++     V     A++L  E+             I    L R GR+ EA  +
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469

Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
                      D+  +  +++      +     ++ + M S G  PD      +L+ Y K
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCK 529

Query: 448 LREFETADDLYSEMQEEG 465
            R  + A  L+ EM  +G
Sbjct: 530 ARRIDDAYSLFREMLMKG 547



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 192/448 (42%), Gaps = 8/448 (1%)

Query: 22  YNVVLRNVLRAKQWELAHG-LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +  +L+ +  AK+ + A   L   M + G   +  +Y+ L+     E   + A+  +  M
Sbjct: 131 FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM 190

Query: 81  EQD---RVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
             D     + ++V Y+ +I+   K     +A  +F  +   G+ P+   Y  +I+ +   
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLST 250

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
             +KE   +++EM   G++PD V Y+ LL+   +N +  EA ++F  +        +T  
Sbjct: 251 GKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIY 310

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
            I++  Y       +       M + G+ P    +N +   Y +  +  EA+H+F  M++
Sbjct: 311 GILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQ 370

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + +   VV Y  +I    K    + A     +M N G+ P+   +S+++       K ++
Sbjct: 371 QWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEK 430

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  LF ++   G+ ++   +  ++    R G V  A+RL+  +     +P+ I   T + 
Sbjct: 431 AEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVD 490

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
                GRI+EA  +       G   D   +  ++  + + ++  +   +F +M   G  P
Sbjct: 491 GHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEM 461
                  +L+   ++  F  A +LY  M
Sbjct: 551 GVVTYNTILHGLFQIGRFCEAKELYLNM 578



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 2/355 (0%)

Query: 9   INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
           INE    +P +F ++ ++  +    +WE A  LF E+  +GI  +   ++ L+    +EG
Sbjct: 404 INEGV--TPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461

Query: 69  MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
               A   +  M +  V  D++ Y+ L++         +A  +   + S G+ PD   YN
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521

Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
           T+++ + KA+   +A  L  EM  +G+ P  V+Y+T+L+   +  +F EA  ++  M   
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581

Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
               D+ T  I+++   + +   +A ++F S+    +   + + N ++    +     +A
Sbjct: 582 RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641

Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
           + LF  +    +  +V TY  + +   K    E+   L   M+  G  PN+   + ++  
Sbjct: 642 MDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP 363
               G + RA +   KL      ++      +I  Y R      AK L  + R P
Sbjct: 702 LLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRFP 756



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/339 (18%), Positives = 140/339 (41%), Gaps = 17/339 (5%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA---IHLFRLMQRK---EIEQNVV 265
           DA +LF  M       SV ++N LL V   A     +   + LF  M R+   ++  +  
Sbjct: 34  DALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSC 93

Query: 266 TYNTMIKIYGK--SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA-MLF 322
           TY  +I  + +   L+H  A   +       +  N + +  ++     A ++D A  +L 
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWSLN-NTVIFGQLLKGLCDAKRVDEATDILL 152

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-------RQPNTIPRETAITIL 375
           +++   G  ++ + Y  ++           A  L+H +         PN +   T I  L
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGL 212

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            +A  ++ A  VF+   D G   +   + C+I  +    K+  V+++ ++M + G  PD 
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDC 272

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
            I A++L+   K      A +++  +  +G      ++  +L  Y      + + S  + 
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDL 332

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           +  +       + +++   Y +   +++A  I ++M ++
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371


>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
 gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
          Length = 669

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 178/361 (49%), Gaps = 36/361 (9%)

Query: 1   RSVAILDWINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           +++A  +W+      Y  + + YNV+L+ +   +Q EL+  L +EM  RGI PD YT+ST
Sbjct: 124 KALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFST 183

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI C  +    + A+ W ++M+ + +  D V Y+++I++  ++   ++A+ ++ +LKS  
Sbjct: 184 LINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
              D V Y  + NV+ +A  ++    L++EMR+ G  P+ V  +TL+    +  K  +A 
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            VF E                                   MR  G+ P+ V+ + L+ +Y
Sbjct: 304 KVFNE-----------------------------------MRTSGVSPTPVTLSILVEMY 328

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                + +A  ++  ++ +  + +V  YN+++K   +    E+A ++++EM+  G  P+ 
Sbjct: 329 TRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDH 388

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +TY T +  +   G +D A  +F K+ +   + D  L+  MI A +  G +  A ++  E
Sbjct: 389 LTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDE 448

Query: 360 L 360
           +
Sbjct: 449 M 449



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 195/434 (44%), Gaps = 52/434 (11%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLV-----AYNTMINVFGKAKLFKEARLLIE 148
           N++ +   ++ + KA++ F  LK+    P+L       YN M+ +    +  + +  L+E
Sbjct: 111 NIVTVLNNINRWEKALAFFEWLKAR---PELYEINRYTYNVMLKILRNGRQLELSEKLVE 167

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM  +G++PD  ++STL+N      +  EAL                             
Sbjct: 168 EMTGRGIQPDNYTFSTLINCAKRCRQPEEAL----------------------------- 198

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
                 + F  M+  GI P  V+YN+++ +YG      EA+ L+  ++    + + VTY 
Sbjct: 199 ------KWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYG 252

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            +  +Y ++ +++    L+QEM++ G  PNA+  +T++    KAGK+++A  +F ++R+S
Sbjct: 253 AIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTS 312

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV   PV    ++  Y RVG    A  +   L+    + +     + +      GR+E+A
Sbjct: 313 GVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQA 372

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             + ++   AG   D   +   +  ++          +F+K+ +    PD+ +  +++ +
Sbjct: 373 EDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRA 432

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQ-VHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
                E E A  ++ EM E GC   D+ V   +LS     K  +   ++ + LD  +   
Sbjct: 433 CKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKSDDERLAILDCLDKFN--- 489

Query: 504 KKELHHVVAGIYER 517
              LH +++ I  +
Sbjct: 490 -APLHELMSAIVRK 502



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 185/392 (47%), Gaps = 52/392 (13%)

Query: 15  YSPSVFAYNVV--LRNVLRAKQWELAHGLFDEMRQRGIAPD-----RYTYSTLITCFGKE 67
           +  S+ A N+V  L N+ R   WE A   F+ ++ R   P+     RYTY+ ++      
Sbjct: 103 WDKSLSAKNIVTVLNNINR---WEKALAFFEWLKAR---PELYEINRYTYNVML------ 150

Query: 68  GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
                                ++     +EL+ KL +          +   GI PD   +
Sbjct: 151 --------------------KILRNGRQLELSEKLVE---------EMTGRGIQPDNYTF 181

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           +T+IN   + +  +EA    E M+ +G+ PD V+Y++++++Y    +  EA+ ++ ++  
Sbjct: 182 STLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKS 241

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
           VN  LD  T   + +VY +    +   +L   MR  G  P+ V  NTL+    +A    +
Sbjct: 242 VNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQ 301

Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
           A  +F  M+   +    VT + ++++Y +   +++A  + + ++  G + +   Y++++ 
Sbjct: 302 AKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMK 361

Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
              + G++++A  + ++++ +G   D + Y+T +  Y   G+V  A+R+  ++   N  P
Sbjct: 362 ACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKP 421

Query: 368 RETAITILAR----AGRIEEATWVFRQAFDAG 395
                T++ R    AG IE+A+ +F +  ++G
Sbjct: 422 DTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 148/305 (48%), Gaps = 4/305 (1%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +YN +L++         +  L   M  + I+ +  T++T+I    +  + E+A    + M
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           ++ GI P+ +TY+++I ++G+ G+++ A  L++KL+S   ++D V Y  +   Y R G  
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDY 264

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
               +L+ E+R     PN +   T +  L++AG++ +A  VF +   +G          +
Sbjct: 265 QSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +E+++R   Y    EV+E +++ G+  D  +   ++ +  +    E A+D+  EM+  GC
Sbjct: 325 VEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGC 384

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
                 +   ++ Y  +   +    +F+++ + +      L  V+    + A  +  AS+
Sbjct: 385 NPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASK 444

Query: 527 IMNRM 531
           I + M
Sbjct: 445 IFDEM 449



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 84/175 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+    N ++  + +A +   A  +F+EMR  G++P   T S L+  + + G +D A  
Sbjct: 280 SPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFE 339

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + ++ +    D+ +Y++L++   +     +A  I   +K +G  PD + Y T +N + 
Sbjct: 340 VYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYA 399

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
              +   AR + +++     KPDT  ++ ++       +  +A  +F EM E  C
Sbjct: 400 TKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGC 454


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/518 (21%), Positives = 234/518 (45%), Gaps = 32/518 (6%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y+ ++    +      A     EM ++   P+  TYS+LI  + K+G+   A   
Sbjct: 127 PNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 186

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L++M       ++  Y+ L++ + K      A+ ++S++K  G+  ++   +  +N   +
Sbjct: 187 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 246

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +   +EA  L+ +M   G+KPD V+Y+ L++ ++++ K   AL++  EM   N   D+ T
Sbjct: 247 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 306

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N++I+   +L  + D + ++ +MR+MG+ P + +YNT+L    +   +  A+ L+  M+
Sbjct: 307 FNVLINCLFKLGKS-DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 365

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            +++  N +T N MI    ++   E A ++++EM   G+ P + TY  ++ I  K+ + D
Sbjct: 366 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 425

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
                 + L +  +++D  +Y  +                               I+ L 
Sbjct: 426 TILQTHELLVNMQLKVDKDVYNIL-------------------------------ISNLC 454

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           + G   +AT V +   + G + D + +  +I  +  +         +  M S    PD  
Sbjct: 455 KLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIE 514

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
              L+L    K      ADDL SE+++ G V +   +  ++  +   ++      ++  +
Sbjct: 515 TYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEM 574

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
                I K   ++++ G + +  ++  A  +MN M  +
Sbjct: 575 VIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 612



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 115/539 (21%), Positives = 222/539 (41%), Gaps = 54/539 (10%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P+V  Y+ ++   ++      A  +  +M  +   P+  TY+ L+    K G  
Sbjct: 156 EEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQ 215

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A+    +M+Q  +  ++ +    +   ++     +A  + +++ S G+ PDLV Y  +
Sbjct: 216 DIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNL 275

Query: 131 INVFGKAKLFKEARLLIEE----------------------------------MREQGVK 156
           ++ F K+     A  L +E                                  MRE G+ 
Sbjct: 276 MDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLS 335

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           PD  +Y+T+LN   +   +  AL ++ EM       +  TCNIMI+   +    ++A  +
Sbjct: 336 PDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDI 395

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
              M  MG+ P+  +Y  LL +  ++      +    L+   +++ +   YN +I    K
Sbjct: 396 LKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCK 455

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
                KAT ++++M+ RGI  +  TY+ +I  +  +  L RA M +  + S  V  D   
Sbjct: 456 LGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIET 515

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y  ++    + GL+  A  LL E+++    PN    ET +    +    +E   ++ +  
Sbjct: 516 YNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMV 575

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G +     +  +I  FS+  K     E+  +M++ G  P      +++  +  L +  
Sbjct: 576 IKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMP 635

Query: 453 T------------ADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKDFNM-LESLFER 495
                        A  L+ EM + G V  +     + S +   G + D  M L+S ++R
Sbjct: 636 DLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 694



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/532 (21%), Positives = 238/532 (44%), Gaps = 25/532 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  +  +L  + +  +      L  EM + G+  +  +Y+ L+    K G    A+  
Sbjct: 22  PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 81

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M     + D++  + LI+   K     +A  +F  L    +VP+ + Y+ +I+  G+
Sbjct: 82  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALID--GR 139

Query: 137 AKL--FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            KL     A   + EM E+   P+ ++YS+L+N YV+     +A  V  +M   N   ++
Sbjct: 140 CKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNI 199

Query: 195 TTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            T  I++D     G  D+A D   L+  M++ G+  +V   +  +     +    EA  L
Sbjct: 200 CTYAILLDGSFKAGWQDIALD---LYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 256

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M    ++ ++V Y  ++  + KS +   A NL QEM ++ +  + +T++ +I    K
Sbjct: 257 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK 316

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            GK D  + ++  +R  G+  D   Y TM+    + G    A  L +E++     PN I 
Sbjct: 317 LGKSDTES-IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAIT 375

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L  AGR+E A  + ++    G     + +  ++ + S++++   +++  E + 
Sbjct: 376 CNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLV 435

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV-----FSDQVHFQMLSLYGA 482
           +     D  +  +++++  KL     A  +  +M+E G +     ++  +H   +S +  
Sbjct: 436 NMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLK 495

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
           R        L ER+  D      E ++++ G   +A  +++A  +++ + KR
Sbjct: 496 RAFMTYSTMLSERVSPDI-----ETYNLLLGGLSKAGLIHEADDLLSEIKKR 542



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 175/394 (44%), Gaps = 40/394 (10%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A++++  +  SGI PD+V + +++    K     E +LL+ EM + G+  + VSY+ LL
Sbjct: 7   EALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILL 66

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG-- 224
           +   +  K  EAL   A M       D+  C ++ID   +    K+A+ LF ++ ++   
Sbjct: 67  DALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLV 126

Query: 225 ---------ID------------------------PSVVSYNTLLRVYGEAELFGEAIHL 251
                    ID                        P+V++Y++L+  Y +  L  +A  +
Sbjct: 127 PNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 186

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            R M  K    N+ TY  ++    K+   + A +L  +M+  G++ N       +    +
Sbjct: 187 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 246

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IP 367
           +G+++ A  L  K+ S G++ D V Y  ++  + + G V+ A  L  E+   N     + 
Sbjct: 247 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 306

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L + G+ +  + ++    + G   D++ +  M+    +   + + +E++ +M+
Sbjct: 307 FNVLINCLFKLGKSDTES-IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 365

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           S    P++    +++N   +    E A D+  EM
Sbjct: 366 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEM 399


>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
 gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 200/426 (46%), Gaps = 19/426 (4%)

Query: 20  FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
           + Y  +++  LR++  E    ++ EM+++G   D + ++ L+    K+   D A    + 
Sbjct: 212 YTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFED 271

Query: 80  MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
           M++     D   Y+ +I +  K+    +++ +F  + + G  P+++AYNTMI     A++
Sbjct: 272 MKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARM 331

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN---HKFVEALSVFAEMNEVNCPLDLTT 196
             +A LL  +M E+  +P   +YS +L+L       HK  E + V  +       +  + 
Sbjct: 332 VDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEVSKKY------MSRSI 385

Query: 197 CNIMIDVYGQLDMAKDADRLF---WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
              ++    +L  A +A RLF   W+  + G   + VS   +L     A    EAI L  
Sbjct: 386 YAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVS---MLECLCSAGKTTEAIDLLG 442

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K +  + V YNT+    GK  +     +L ++M+  G  P+  TY+ +I+ +G+AG
Sbjct: 443 KIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAG 502

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
           K+D A  +F++L  S  + D   Y ++I    + G +  A     E+ +    P+ +   
Sbjct: 503 KVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYS 562

Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           T I    +  ++E A  +F +    G   +I  +  +++   R+ + A  ++++ K++  
Sbjct: 563 TLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQ 622

Query: 430 GYFPDS 435
           G  PDS
Sbjct: 623 GLIPDS 628



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 180/391 (46%), Gaps = 32/391 (8%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +FA+N++L  +++  + + A+ +F++M+++   PD YTY+ +I   GK G  D ++   +
Sbjct: 246 IFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFE 305

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG-KA 137
           +M     S +++ Y+ +I+         KAI +F ++      P    Y+ ++++   + 
Sbjct: 306 EMLNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATER 365

Query: 138 KLFK-------------------------------EARLLIEEMREQGVKPDTVSYSTLL 166
           KL K                               EA  L   M     + D  +  ++L
Sbjct: 366 KLHKLDEVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSML 425

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID 226
                  K  EA+ +  +++E    +D    N +    G+L        L+  M++ G  
Sbjct: 426 ECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPL 485

Query: 227 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 286
           P   +YN L+  +G A    EAI +F  ++  + + +  +YN++I   GK+   ++A   
Sbjct: 486 PDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMK 545

Query: 287 MQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
            +EM  +G+ P+ +TYST+I  +GK  K++ A  LF ++ + G   + V Y  ++   ER
Sbjct: 546 FKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLER 605

Query: 347 VGLVAHAKRLLHELRQPNTIPRETAITILAR 377
            G  A A  L  +L+Q   IP     ++LAR
Sbjct: 606 SGRTAEAVDLYAKLKQQGLIPDSITYSVLAR 636



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)

Query: 1   RSVAILDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEM---RQRGIAPDRY 55
           R +  LD + E ++   S S++AY  ++R + +      AH LF  M    +RG   DR 
Sbjct: 365 RKLHKLDEVVEVSKKYMSRSIYAY--LVRTLKKLGHASEAHRLFCNMWNCHERG---DRD 419

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
              +++ C    G    AI  L ++ +  VS D V+Y+ +     KL   S    ++ ++
Sbjct: 420 ACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKM 479

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 175
           K  G +PD   YN +I+ FG+A    EA  + EE+ +   KPDT SY++L+N   +N   
Sbjct: 480 KQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHL 539

Query: 176 VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 235
            EA   F EM E     D+ T + +I+ +G+ D  + A RLF  M   G  P++V+YN L
Sbjct: 540 DEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNIL 599

Query: 236 LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
           L     +    EA+ L+  ++++ +  + +TY+ + ++   S
Sbjct: 600 LDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLARLQSGS 641



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 159/326 (48%), Gaps = 3/326 (0%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           YSP+V AYN +++ +  A+  + A  LF +M ++   P  +TYS ++     E      +
Sbjct: 312 YSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHK-L 370

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             + ++ +  +S    +Y+ L+   +KL   S+A  +F  + +     D  A  +M+   
Sbjct: 371 DEVVEVSKKYMSRS--IYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECL 428

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
             A    EA  L+ ++ E+GV  DTV Y+T+ +   +  +      ++ +M +     D 
Sbjct: 429 CSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDT 488

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T NI+I  +G+     +A ++F  +      P   SYN+L+   G+     EA   F+ 
Sbjct: 489 FTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKE 548

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  K +  +VVTY+T+I+ +GK+ + E A  L  EM   G  PN +TY+ ++    ++G+
Sbjct: 549 MCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGR 608

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTM 340
              A  L+ KL+  G+  D + Y  +
Sbjct: 609 TAEAVDLYAKLKQQGLIPDSITYSVL 634



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 215/500 (43%), Gaps = 19/500 (3%)

Query: 53  DRYTYSTLITCFGKEGM---FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAI 109
           D +TYS +I    K  +   F  A S + +ME++ V G +   + LI       D  K I
Sbjct: 140 DCFTYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCI 199

Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
            +   +K  G+      Y  ++  + +++  ++   +  EM+++G   D  +++ LL+  
Sbjct: 200 GL---IKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDAL 256

Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
           V++ +   A  VF +M   +C  D  T  IMI + G++    ++  LF  M   G  P+V
Sbjct: 257 VKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNV 316

Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ- 288
           ++YNT+++    A +  +AI LF  M  KE   +  TY+ ++ +     +  K   +++ 
Sbjct: 317 IAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEV 376

Query: 289 --EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYER 346
             +  +R I      Y+ ++    K G    A  LF  + +     D     +M+     
Sbjct: 377 SKKYMSRSI------YAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCS 430

Query: 347 VGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISV 402
            G    A  LL ++ +     +T+   T  + L +  +I     ++ +    G + D   
Sbjct: 431 AGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFT 490

Query: 403 FGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
           +  +I  F R  K    I++FE++  + Y PD+     ++N  GK    + A   + EM 
Sbjct: 491 YNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMC 550

Query: 463 EEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLN 522
           E+G       +  ++  +G      M   LF+ + ++        ++++    ER+ R  
Sbjct: 551 EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTA 610

Query: 523 DASRIMNRMNKRRTFNSSLV 542
           +A  +  ++ ++     S+ 
Sbjct: 611 EAVDLYAKLKQQGLIPDSIT 630



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 87/160 (54%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P  F YN+++ +  RA + + A  +F+E+      PD  +Y++LI C GK G  D A   
Sbjct: 486 PDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMK 545

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M +  ++ D+V YS LIE   K      A  +F  + + G  P++V YN +++   +
Sbjct: 546 FKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLER 605

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFV 176
           +    EA  L  ++++QG+ PD+++YS L  L   +H+ V
Sbjct: 606 SGRTAEAVDLYAKLKQQGLIPDSITYSVLARLQSGSHRKV 645


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 212/476 (44%), Gaps = 34/476 (7%)

Query: 21  AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
           +YN++L+ +  A + + AH LFDEM      PD  TY  ++  +      ++AI  L +M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 81  EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
               +  + V Y+++I L       S A+ +   +   G+V D   + T+++ F +    
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
             AR   +EM+++G+  D V+Y+ L+N      +  EA  V  EM +    +D  T  ++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 201 IDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
           ID Y ++    +A  +   M +  + P+VV+Y  L     +      A  L   M  K +
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
           E N+ TYN++I    K+   E+A   M +M   G++P+  TY+TII    ++ +LDRA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGR 380
           L Q++   G++   V Y  ++  +   G V   KRLL  + + N  P  T    L +   
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           IE                               K   +  E+++ M S    P+ +   +
Sbjct: 612 IE-------------------------------KNMKSTTEIYKGMLSQEVVPNENTYNI 640

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           ++  + K R  + A   +SEM E+G   +   +  ++ L   +K F     LFE++
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 194/421 (46%), Gaps = 4/421 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E    P V  Y +++       + E A  L  EM  RG+  +   Y+++I     EG  
Sbjct: 277 DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  ++ M    V  D  +++ ++    +  D + A + F  ++  G+  D V Y  +
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   +A   KEA  +++EM ++G+  D V+Y+ L++ Y +  K  EA  V  +M +   
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T   + D   +      A+ L   M   G++ ++ +YN+L+    +A    +A+ 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M    ++ +V TY T+I    +S E ++A +L+QEM ++GI+P  +TY+ ++  + 
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            +G+++    L + +    +  +   Y +++  Y     +     +   +     +P E 
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636

Query: 371 AITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
              IL     +A  ++EA +   +  + G     S +  +I L ++ KK+     +FEKM
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696

Query: 427 R 427
           R
Sbjct: 697 R 697



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 153/316 (48%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           Y  ++  + RA + + A  +  EM  +G+  D  TY+ LI  + K G    A     +M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
           Q RV+ ++V Y+ L +   K  D   A  +   + S G+  ++  YN++IN   KA   +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
           +A   + +M E G+KPD  +Y+T++    ++ +   A S+  EM +      + T N+++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
           + +      +   RL   M +  I P+  +YN+L++ Y   +       +++ M  +E+ 
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
            N  TYN +IK + K+   ++A     EM  +G    A +Y+ +I +  K  K   A  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 322 FQKLRSSGVEIDPVLY 337
           F+K+R   +  +P +Y
Sbjct: 693 FEKMRKERLTAEPDVY 708



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 6/344 (1%)

Query: 22  YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
           +  V+    R      A   FDEM++RG+A D  TY+ LI    + G    A   LQ+ME
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 82  QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
              +  D V Y+ LI+   K+   ++A  + +++    + P++V Y  + +   K     
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
            A  L+ EM  +G++ +  +Y++L+N   +     +A+    +M+E     D+ T   +I
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 202 DVYGQLDMAKDADR---LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
              G L  +K+ DR   L   M   GI P++V+YN L+  +  +        L   M  K
Sbjct: 538 ---GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
            I  N  TYN+++K Y      +  T + + M ++ + PN  TY+ +I    KA  +  A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
                ++   G  +    Y  +I    +      A+RL  ++R+
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/426 (20%), Positives = 186/426 (43%), Gaps = 19/426 (4%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A+ +F  L       +  +YN ++     A   K+A  L +EM      PD V+Y  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMV 292

Query: 167 NLYVENHKFVEALSVFAEMN----EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
           + Y    +   A+ + +EM     E+N P+  T+   ++   GQ+    DA R+   M  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELN-PVAYTSVIALLCDEGQV---SDAVRVVEDMVM 348

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+      + T++  +        A + F  MQ++ +  + VTY  +I    ++ E ++
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A  ++QEM+++G++ +A+TY+ +I  + K GK+  A ++  K+    V  + V Y  +  
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468

Query: 343 AYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDAGEVK 398
              + G V  A  LLHE+       N     + I  L +AG +E+A        +AG   
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528

Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
           D+  +  +I    ++K+      + ++M   G  P      +++N +      E    L 
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588

Query: 459 SEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERA 518
             M E+    +   +  ++  Y   K+      +++ + S   +  +  ++++   + +A
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 519 NRLNDA 524
             + +A
Sbjct: 649 RNMKEA 654



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 121/262 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           + R +P+V  Y  +   + +      A+ L  EM  +G+  + +TY++LI    K G  +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  +  M++  +  D+  Y+ +I    +  +  +A S+   +   GI P +V YN ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F  +   +  + L+E M E+ + P+T +Y++L+  Y           ++  M      
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T NI+I  + +    K+A      M + G   +  SYN L+R+  + + F EA  L
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 252 FRLMQRKEIEQNVVTYNTMIKI 273
           F  M+++ +      YN  I +
Sbjct: 693 FEKMRKERLTAEPDVYNFYIDL 714


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 213/487 (43%), Gaps = 4/487 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  YN +L +  +  + +    L  EM++RG AP+  TY+ LI    K+G F+ A   
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 291

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           + +M +  +      Y+ LI         ++A+S+   +   G  P +  YN+ I    K
Sbjct: 292 IGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 351

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                +A   + +M    + PD VSY+TL+  Y      ++A  +F E+  +     + T
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++D   +    + A +L   M   GI P +V+Y  L+    +      A   F  M 
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            + +E +   Y T I    K  +  +A +L +EM  +G  P+ I Y+ ++    K G L+
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL- 375
            A+ L QK+ S GV  D V Y ++I A+   G +   + + +E+      P     T+L 
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591

Query: 376 ---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
              A  GR+E A   F +  + G + ++  +  +I    + ++       F +M   G F
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESL 492
           P+ +   +++N    +  ++ A  LY +M + G       H  +L   G       +  L
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711

Query: 493 FERLDSD 499
              LDS+
Sbjct: 712 ESLLDSE 718



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 196/434 (45%), Gaps = 4/434 (0%)

Query: 36  ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
           E    +FD+M +  ++PD    + ++     + +   A+   + M +  +   +V Y+ L
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 96  IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
           ++   K     + + + S ++  G  P+ V YN +IN   K   F++A+ LI EM + G+
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
           K    +Y+ L+  Y       EALS+  EM        + T N  I    +L    DA +
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 360

Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
               M    + P VVSYNTL+  Y       +A  LF  ++   +   +VTYNT++    
Sbjct: 361 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 420

Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
           +  E E A  L  EM N GI P+ +TY+ ++    K G L  A   F ++   G+E+D  
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480

Query: 336 LYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQA 391
            Y T IV   ++G  + A  L  E+      P+ I     +  L + G +EEA+ + ++ 
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540

Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
              G + D   +  +I     N +     E+F +M S G  P      ++++ +      
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 452 ETADDLYSEMQEEG 465
           E A   +SEMQE+G
Sbjct: 601 ERAFIYFSEMQEKG 614



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 37/310 (11%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
           ++ INE    +P +  Y +++    +     +A   FDEM   G+  D Y Y+T I    
Sbjct: 433 VEMINEGI--APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
           K G    A S  ++M       DL++Y+ +++   KL +  +A  +  ++ S G++PD V
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
            Y ++I+   +    ++ R +  EM  +G+ P  V+Y+ L++ +    +   A   F+EM
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
            E                                    GI P+V++YN+L+    +    
Sbjct: 611 QE-----------------------------------KGILPNVITYNSLINGLCKVRRM 635

Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
            +A + F  M  K I  N  +Y  +I         ++A +L ++M +RG++P++ T+S +
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695

Query: 306 IAIWGKAGKL 315
           +   GK  KL
Sbjct: 696 LKQLGKDCKL 705


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 175/374 (46%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           EAR  P+   Y ++++    +   E A  +F EMR  G+      Y+  I    K G  D
Sbjct: 183 EARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSD 242

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A    ++M++D        Y+ LI L  K      A+ +F  + S    P++  Y  ++
Sbjct: 243 KAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALV 302

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N F +  L ++A  + E+M+E G++PD  +Y+ L+  Y        A  +F+ M  + C 
Sbjct: 303 NAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCE 362

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            D  + NI++D YG+     DA+ +F  M+++GI P++ S+  LL  Y +     +   +
Sbjct: 363 PDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEI 422

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M +  ++ +    N+M+ +YG+  +  K   +++ M+      +  TY+ +I  +G+
Sbjct: 423 LNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQ 482

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           AG ++R   LFQ L S G++ D V + + I AY +  L      +  E+      P    
Sbjct: 483 AGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGT 542

Query: 372 ITILARAGRIEEAT 385
             +L  A   E+ T
Sbjct: 543 AKVLLAACSNEDQT 556



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 217/512 (42%), Gaps = 17/512 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           LR + W+   G  D     GI P     +  I  + ++G+   +I W      D +   L
Sbjct: 66  LRGRGWKYGSGFVD-----GIFPVLSPTAQQILDYVEKGVESESI-W---GSLDMLPPTL 116

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLK----SSGIVPDLVAYNTMINVFGKAKLFKEARL 145
             + ++  +A +L    +  SI S  +     S   PD++ YN +I  FG+  L+KEA  
Sbjct: 117 DAWDDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAES 176

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
              ++ E    P   +Y+ L+  Y  +    +A +VFAEM     P      N  I+   
Sbjct: 177 TYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLM 236

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
           +   +  A+ +F  M+K    P+  +Y  L+ +YG+A     A+ LF  M   + + N+ 
Sbjct: 237 KGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNIC 296

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TY  ++  + +    EKA  + ++MQ  G+EP+   Y+ ++  + +AG    AA +F  +
Sbjct: 297 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLM 356

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRI 381
           +  G E D   Y  ++ AY + G    A+ +  ++++    P   +  +L    ++ G +
Sbjct: 357 QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSV 416

Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            +   +  Q   +G   D  V   M+ L+ R  ++  + EV   M    Y  D     ++
Sbjct: 417 NKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNIL 476

Query: 442 LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 501
           +N YG+    E  +DL+  +  +G           +  Y  +K +     +FE +  D  
Sbjct: 477 INRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGC 536

Query: 502 INKKELHHVVAGIYERANRLNDASRIMNRMNK 533
                   V+       ++    + ++  M+K
Sbjct: 537 YPDGGTAKVLLAACSNEDQTEQVTTVIRTMHK 568



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 149/319 (46%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   Y +++    +A +  +A  LF EM      P+  TY+ L+  F +EG+ + A   
Sbjct: 258 PTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEV 317

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            +QM++  +  D+  Y+ L+E   +      A  IFS ++  G  PD  +YN +++ +GK
Sbjct: 318 FEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGK 377

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    +A  + ++M+  G+ P   S+  LL+ Y +     +   +  +M +    LD   
Sbjct: 378 AGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYV 437

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N M+++YG+L      + +   M K      + +YN L+  YG+A        LF+L+ 
Sbjct: 438 LNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLP 497

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K ++ +VVT+ + I  Y K   + K   + +EM + G  P+  T   ++A      + +
Sbjct: 498 SKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTE 557

Query: 317 RAAMLFQKLRSSGVEIDPV 335
           +   + + +      + PV
Sbjct: 558 QVTTVIRTMHKDMKTVLPV 576


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 203/454 (44%), Gaps = 4/454 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           PS   +  +L ++ + K +     L  +M   GI PD YT + LI  F        A S 
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L ++ +     D   ++ LI          +A+ +F +    G  PD+V Y T++N   K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                 A  L+  M ++  +P+ ++Y+T+++   ++ +  EA ++F+EM       D+ T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N +I     L   K    L   M    I P+VV ++T++    +  +   A  +  +M 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
           ++ +E +VVTY  ++  +    E ++A  +   M ++G  PN  +Y+ +I  + +  ++D
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI-- 374
           +A  L +++   G+  D V Y T+I     VG + HA  L HE+     IP      I  
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 375 --LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
             L +   + EA  + +    +    DI V+   I+   R  +     ++F  + S G  
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567

Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           PD     ++++   K    + A+ L+ +M E GC
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 197/431 (45%), Gaps = 6/431 (1%)

Query: 17  PSVFAYNVVLRNV-LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           P    +N ++R + +  K  E  H LFD+    G  PD  TY TL+    K G   +AI 
Sbjct: 218 PDNTTFNTLIRGLCVEGKIGEALH-LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 276

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+ M Q     +++ Y+ +I+   K    ++A ++FS + + GI PD+  YN++I+   
Sbjct: 277 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 336

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
               +K    L+ EM    + P+ V +ST+++   +      A  V   M +     D+ 
Sbjct: 337 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 396

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   ++D +       +A ++F +M   G  P+V SYN L+  Y + +   +A+ L   M
Sbjct: 397 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 456

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             + +  + VTYNT+I         + A  L  EM   G  P+ +TY  ++    K   L
Sbjct: 457 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 516

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
             A +L + +  S ++ D ++Y   I    R G +  A+ L   L     QP+       
Sbjct: 517 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 576

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
           I  L + G ++EA  +FR+  + G  +D  ++  +I  F R+ +     ++ ++M + G+
Sbjct: 577 IHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGF 636

Query: 432 FPDSHIIALVL 442
             D     L++
Sbjct: 637 SADVSTTTLIV 647



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 197/421 (46%), Gaps = 10/421 (2%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P V  Y  ++  + +      A  L   M Q+   P+   Y+T+I    K+     A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
           +   +M    +S D+  Y++LI     L ++    ++ + + +S I+P++V ++T+++  
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K  +   A  +++ M ++GV+PD V+Y+ L++ +    +  EA+ VF  M    C  ++
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            + NI+I+ Y Q+     A  L   M   G+    V+YNTL+           AI LF  
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M       ++VTY  ++    K+    +A  L++ ++   ++ + + Y+  I    +AG+
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI-- 372
           L+ A  LF  L S G++ D   Y  MI    + GL+  A +L  ++ + N   R+  I  
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE-NGCSRDGCIYN 609

Query: 373 TIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
           TI+    R+     AT + ++    G   D+S    ++E+ S +     + + FE++R  
Sbjct: 610 TIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDD----GLDQSFERLRLR 665

Query: 430 G 430
           G
Sbjct: 666 G 666



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/494 (21%), Positives = 211/494 (42%), Gaps = 4/494 (0%)

Query: 42  FDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARK 101
           F+ M      P    ++ L+T   K   + + +S   QM+   +  D+   + LI     
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197

Query: 102 LSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
           L     A S+ ++L   G  PD   +NT+I          EA  L ++   +G +PD V+
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257

Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           Y TL+N   +      A+ +   M + NC  ++   N +ID   +     +A  LF  M 
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 317

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             GI P + +YN+L+        +     L   M   +I  NVV ++T++    K     
Sbjct: 318 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 377

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
            A +++  M  RG+EP+ +TY+ ++       ++D A  +F  +   G   +   Y  +I
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 437

Query: 342 VAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y ++  +  A  LL ++       +T+   T I  L   GR++ A  +F +   +G++
Sbjct: 438 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 497

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            D+  +  +++   +N   A  + + + +  +    D  +  + ++   +  E E A DL
Sbjct: 498 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 557

Query: 458 YSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYER 517
           +S +  +G     + +  M+     R   +    LF ++D +       +++ +   + R
Sbjct: 558 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLR 617

Query: 518 ANRLNDASRIMNRM 531
           +N    A++++  M
Sbjct: 618 SNETFGATQLLQEM 631



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 10/321 (3%)

Query: 13  ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
           ++  P+V  ++ V+  + +     +AH + D M +RG+ PD  TY+ L+         D 
Sbjct: 354 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE 413

Query: 73  AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
           A+     M       ++  Y+ LI    ++    KA+ +  ++   G++ D V YNT+I+
Sbjct: 414 AVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIH 473

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
                   + A  L  EM   G  PD V+Y  LL+   +NH   EA+ +   +   N   
Sbjct: 474 GLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDA 533

Query: 193 DLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
           D+   NI ID     G+L+ A+D   LF ++   G+ P V +YN ++    +  L  EA 
Sbjct: 534 DILVYNIAIDGMCRAGELEAARD---LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LFR M      ++   YNT+I+ + +S E   AT L+QEM   G   +  T + I+ + 
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650

Query: 310 GKAGKLDRAAMLFQKLRSSGV 330
              G LD++   F++LR  GV
Sbjct: 651 SDDG-LDQS---FERLRLRGV 667



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E +     +  YN+ +  + RA + E A  LF  +  +G+ PD  TY+ +I    K G+ 
Sbjct: 527 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 586

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           D A    ++M+++  S D  +Y+ +I    + ++   A  +   + + G   D V+  T+
Sbjct: 587 DEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSAD-VSTTTL 645

Query: 131 I 131
           I
Sbjct: 646 I 646


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 238/544 (43%), Gaps = 9/544 (1%)

Query: 5   ILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGL--FDEMRQRGIAPDRYTYSTLIT 62
           +L  +    R  PS+ A N VL  + R+        L  F  +    + P+ YT++ L+ 
Sbjct: 153 LLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVH 212

Query: 63  CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
               +G    A+S L  M+   +S D V Y+ L+    +     +A ++ +R+K  G+ P
Sbjct: 213 THCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAP 272

Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
               YNT+++ + +    K+A  ++E M   G +PD  +Y+ L     +  K  EA  + 
Sbjct: 273 TRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLK 332

Query: 183 AEMNEVNCPL-DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR-VYG 240
            EM  +   L D+ T N + D   +   + DA RL   MR+ G+  ++V++N +++ +  
Sbjct: 333 DEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCK 392

Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
           + EL G A+     M    +  +V+TYNT+I  + K+    KA  LM EM  RG++ +  
Sbjct: 393 DGELEG-ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTF 451

Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
           T +T++    K  + + A  L Q     G   D V Y T++ AY +      A RL  E+
Sbjct: 452 TLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM 511

Query: 361 RQPNTIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKY 416
            +    P      T I  L+R GR++EA     +  + G V D + +  +I  + +    
Sbjct: 512 IEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDL 571

Query: 417 ANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
            N  +   KM    + PD      ++N      + + A  L+    E+G       +  +
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTL 631

Query: 477 LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
           +       D +     F  +++         ++VV      A R  +A  +++++ +  T
Sbjct: 632 IQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691

Query: 537 FNSS 540
            + S
Sbjct: 692 LSQS 695



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 3/369 (0%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN +     + +    A  L +EMR++G+     T++ +I    K+G  + A+  
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L +M  D ++ D++ Y+ LI    K  + +KA ++   +   G+  D    NT++    K
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
            K ++EA+ L++   ++G  PD VSY T++  Y + +    AL ++ EM E      ++T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 197 CNIMIDVYGQLDMAKDA-DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
            N +I    ++   K+A D+L   M K G+ P   +YN ++  Y +      A      M
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                + +VVT NT++     + + +KA  L +    +G + + ITY+T+I    K G +
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDV 641

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A   F  + + G++ D   Y  ++ A    G    A+ +LH+L +  T+ +  +  +L
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL 701

Query: 376 ARAGRIEEA 384
            +   ++EA
Sbjct: 702 -KPSSVDEA 709



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 133/332 (40%), Gaps = 53/332 (15%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
            F  N VL N+ + K++E A GL     QRG  PD  +Y T++  + KE   + A+    
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD--------------- 123
           +M + +++  +  Y+ LI+   ++    +AI   + L   G+VPD               
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEG 569

Query: 124 --------------------LVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
                               +V  NT++N         +A  L E   E+G K D ++Y+
Sbjct: 570 DLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYN 629

Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
           TL+    ++     AL  FA+M       D  T N+++    +    ++A  +   + + 
Sbjct: 630 TLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAES 689

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV---------TYNTMIKIY 274
           G         TL + +    L   ++      +  + E+  V          Y  ++   
Sbjct: 690 G---------TLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGL 740

Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
             S + ++A  ++ EM  +G+  ++ TY T++
Sbjct: 741 CTSGQFKEAKAILDEMMQKGMSVDSSTYITLM 772



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P V   N ++  +    + + A  LF+   ++G   D  TY+TLI    K+G  D
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV---------- 121
           +A+ +   ME   +  D   Y+ ++    +     +A ++  +L  SG +          
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLK 702

Query: 122 PDLV-------------------------AYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
           P  V                         AY  ++N    +  FKEA+ +++EM ++G+ 
Sbjct: 703 PSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762

Query: 157 PDTVSYSTLLNLYVENHK 174
            D+ +Y TL+   V+  K
Sbjct: 763 VDSSTYITLMEGLVKRQK 780


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 186/365 (50%), Gaps = 3/365 (0%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF---GKEGMF 70
           R   ++  +N+ +  + RA +   A    ++M+  GI+P+  TY+TL+  +   G  G  
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKM 254

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A +++++M  +++  + V ++ LI+   K  + + A   F  ++  G+ P++V YN++
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN        +EA  L ++M   G+KP+ V+Y+ L+N + +     EA  VF ++++   
Sbjct: 315 INGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++ T N MID Y +  M ++   L  SM   GI P+V +YN L+      +    A  
Sbjct: 375 VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE 434

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M+ K ++ +VVTYN +I    K+ +   A  L+ EM N G++PN +TY+T++  + 
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             GKL  A  +  ++     + + V Y  +I  Y ++  +  A  LL+E+ +    P  T
Sbjct: 495 MEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 554

Query: 371 AITIL 375
              I+
Sbjct: 555 TYDIV 559



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 194/385 (50%), Gaps = 7/385 (1%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S+ + N +L  +++  +      ++ EM +R I  +  T++  I    + G  + A   +
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINVF 134
           + M+   +S ++V Y+ L++   K     K   A +    + ++ I P+ V +NT+I+ F
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K +    A+   EEM++QG+KP+ V+Y++L+N    N K  EA+ ++ +M  +    ++
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I+ + +  M K+A ++F  + K  + P+V+++NT++  Y +  +  E   L   
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + I  NV TYN +I    +  + + A  L+ EM+N+G++ + +TY+ +I    K  K
Sbjct: 404 MLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDK 463

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRET 370
              A  L  ++ + G++ + V Y T++  Y   G +  A     R+  E +QPN +    
Sbjct: 464 SRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNV 523

Query: 371 AITILARAGRIEEATWVFRQAFDAG 395
            I    +  ++E A  +  +  + G
Sbjct: 524 LIKGYCKINKLEAANGLLNEMLEKG 548



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 198/440 (45%), Gaps = 44/440 (10%)

Query: 34  QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS 93
           +   A+  F   +  G      + + L++   KE          ++M + R+  +L  ++
Sbjct: 145 ELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFN 204

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK----AKLFKEARLLIEE 149
             I    +    +KA      +K+ GI P++V YNT+++ + K     K++K A   ++E
Sbjct: 205 IFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYK-AEAFMKE 263

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M    + P+ V+++TL++ + ++     A   F EM +     ++ T N +I+       
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK 323

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            ++A  L+  M  +G+ P++V+YN L+  + + ++  EA  +F  + ++E+  NV+T+NT
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           MI  Y K    E+  +L   M + GI PN  TY+ +IA   +   L  A  L  ++ + G
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEAT 385
           ++ D V Y  +I    +     +A++LL+E+     +PN +   T +      G+++ A 
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
                                           NV    EK R     P+     +++  Y
Sbjct: 504 --------------------------------NVRTRMEKERKQ---PNVVTYNVLIKGY 528

Query: 446 GKLREFETADDLYSEMQEEG 465
            K+ + E A+ L +EM E+G
Sbjct: 529 CKINKLEAANGLLNEMLEKG 548



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 181/391 (46%), Gaps = 13/391 (3%)

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY---GQL 207
           ++ G K    S + LL+  V+ +K  +   V+ EM +     +L T NI I+     G+L
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGEAIHLFRLMQRKEIEQNV 264
           + A+DA      M+  GI P+VV+YNTL+  Y   G A    +A    + M   +I  N 
Sbjct: 217 NKAEDA---IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNE 273

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VT+NT+I  + K      A    +EMQ +G++PN +TY+++I      GKL+ A  L+ K
Sbjct: 274 VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGR 380
           +   G++ + V Y  +I  + +  ++  A ++  ++ +    PN I   T I    + G 
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           +EE   +     D G + ++S + C+I    R +      E+  +M + G   D     +
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
           +++   K  +   A+ L +EM   G   +   +  ++  Y          ++  R++ + 
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513

Query: 501 NINKKELHHVVAGIYERANRLNDASRIMNRM 531
                  ++V+   Y + N+L  A+ ++N M
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/322 (20%), Positives = 151/322 (46%), Gaps = 7/322 (2%)

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F   +  G   S+ S N LL    +    G+  ++++ M ++ I  N+ T+N  I    +
Sbjct: 153 FTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCR 212

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW---GKAGKLDRAAMLFQKLRSSGVEID 333
           + +  KA + +++M+  GI PN +TY+T++  +   G AGK+ +A    +++ ++ +  +
Sbjct: 213 AGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN 272

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFR 389
            V + T+I  + +   VA AK+   E++    +PN +   + I  L   G++EEA  ++ 
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLR 449
           +    G   +I  +  +I  F + K      +VF+ +      P+      ++++Y K  
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392

Query: 450 EFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHH 509
             E    L S M +EG + +   +  +++    ++D    + L   +++         ++
Sbjct: 393 MMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452

Query: 510 VVAGIYERANRLNDASRIMNRM 531
           ++     + ++  +A +++N M
Sbjct: 453 ILIDGLCKNDKSRNAEKLLNEM 474



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
           E+ R  P+V  YNV+++   +  + E A+GL +EM ++G+ P+R TY
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 228/480 (47%), Gaps = 19/480 (3%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           ++ A NV+L  +++  ++EL   +++EM   G++P   T+ TLI    ++G    A    
Sbjct: 146 TIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMF 205

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M    +   +++Y+ LI      +   +A S+   ++  G+ P++  YNT+++ + K 
Sbjct: 206 DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKL 265

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
              K+A  L ++M  +G+ PD V++  L++   +  +   A ++F  M + +   ++   
Sbjct: 266 ANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVY 325

Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
           N +ID Y ++    +A  LF  + +  + P V +Y+ L+R         EA ++F  M +
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
           + I  N VTYN++I    K  + +KA  +  +M   G+EPN IT+ST+I  + K   L  
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI--- 374
           A  ++ ++    +  D V Y  MI  + + G +  A +L  ++      P    I+    
Sbjct: 446 AMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505

Query: 375 -LARAGRIEEATWVF---------RQAFDAGEVK----DISVFGCMIELFSRNKKYANVI 420
            L + G+I +A  +F         R   DAG  K    +   +  +I    ++ +++  +
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
           ++F  MR  G  PD  I  ++L    +++       L+++M + G + +  VH  +   Y
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMM--LHADMLKFGVIPNSAVHVILCECY 623



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 243/533 (45%), Gaps = 21/533 (3%)

Query: 10  NEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM 69
           +E +R   S F  NV    ++   + EL         + G A      + L+    K G 
Sbjct: 103 SELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGR 162

Query: 70  FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
           F+      ++M  + +S  ++ +  LI+   +  D  +A  +F  ++  GIVP ++ Y  
Sbjct: 163 FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTI 222

Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
           +I         +EA  +   MRE GV P+  +Y+TL++ Y +     +AL ++ +M    
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282

Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
              D+ T  I+ID   +    K A  LF +M K  + P++  YN+L+  Y +     EA+
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342

Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
            LF  ++R E+  +V TY+ +I+        E+A N+ ++M   GI  N++TY+++I   
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNT 365
            K GK+D+A  +  ++  +GVE + + + T+I  Y ++  +  A  +  E+      P+ 
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF-E 424
           +     I    + G ++EA  ++    D G   +     C+++   ++ K ++ +E+F E
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 425 KMR---------SAGYFPD--SHII-ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
           K+          + G  P   +H+    +++   +  +F  A  L+S+M+  G    + +
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 473 HFQML-SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
           +  ML  L+  +    ML +   +     N     +H ++   Y+ +  L  A
Sbjct: 583 YVVMLRGLFQVKYILMMLHADMLKFGVIPN---SAVHVILCECYQESGFLKSA 632



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 11/376 (2%)

Query: 91  LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEM 150
           L  NL++  +       A S  SRLKSS   P++  Y  +I V  K +L +EA   +   
Sbjct: 84  LVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEA---LSMY 138

Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID-VYGQLDM 209
            + G      + + LL + V+  +F     ++ EM        + T   +ID    Q D+
Sbjct: 139 HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
            + A  +F  MR  GI P+V+ Y  L+R         EA  + R M+   +  NV TYNT
Sbjct: 199 LR-AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNT 257

Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
           ++  Y K    ++A  L Q+M   G+ P+ +T+  +I    K G++  A  LF  +    
Sbjct: 258 LMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS 317

Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEAT 385
           V  +  +Y ++I AY +VG V+ A  L  EL +    P     +IL R      R EEA 
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG 377

Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
            +F +    G + +   +  +I+   +  K    +E+  +M   G  P+    + +++ Y
Sbjct: 378 NIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGY 437

Query: 446 GKLREFETADDLYSEM 461
            K+R  + A  +YSEM
Sbjct: 438 CKIRNLQAAMGIYSEM 453


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/561 (22%), Positives = 251/561 (44%), Gaps = 47/561 (8%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V +Y+ V+       Q +  + LF EM  RGI PD  TY+T+I    K  +FD A + 
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            QQM  + V  ++  Y+ LI     +  + + + +   + + G  P+   Y +++N   K
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYST----------------LLNLYVEN------HK 174
               +EAR   + M  +G+KP   +Y                  LLNL V N      H 
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380

Query: 175 FV-------------EALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
           F              +A+ +F +M +     D  +   +ID   +L    DA+  F  M 
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             G+ P +V +++L+      + + +   LF  M    I  N+V +NT++    K     
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
           +   L+  ++  G+ P+ I+Y+T+I     AG +D A+ L + + S G++ D   Y T++
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 342 VAYERVGLV----AHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV 397
             Y + G +    +H +++L     P  +   T +  L +  R  EA  ++    ++G  
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDL 457
            DI  +  ++    ++      I++F+ + S G   +     +++ +  K    E A DL
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 458 YSEMQEEGCVFSDQVHFQM----LSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 513
           ++ +   G V  + V +++    L   G+ ++F+ L S  E+  + +  N + L+ +V  
Sbjct: 681 FAAIPANGLV-QNVVTYRLVVENLIEEGSLEEFDSLFSAMEK--NGTAPNSQMLNALVRR 737

Query: 514 IYERANRLNDASRIMNRMNKR 534
           +  R + ++ A   ++++++R
Sbjct: 738 LLHRGD-ISRAGAYLSKLDER 757



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 203/451 (45%), Gaps = 19/451 (4%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-------QWELAHGLFDEMRQRG---IA 51
           ++ + D +   AR   SV A+N +L  V R+        + E    LF+ M +     +A
Sbjct: 33  ALKLFDELLPHAR-PASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91

Query: 52  PDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI 111
           P+R TYS LI CF + G  +   +    + +     D ++ + L+          +A+ +
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 112 -FSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV---KPDTVSYSTLLN 167
              R+   G +PD V+YN ++      K  +EA  L+  M +  V    P+ VSYST++N
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 168 LYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
            +    +  +  ++F EM +   P D+ T   +ID   +  +   A+ +F  M   G+ P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           ++ +YN L+  Y     + E + +   M     + N  TY +++    K+    +A    
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
             M  +GI+P+  TY  ++  +   G L     L   + ++G+  +  ++     AY + 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 348 GLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
           G++  A  + +++RQ    P+ +     I  L + GR+++A   F Q  + G   DI VF
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 404 GCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             ++       K+  V E+F +M + G  P+
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPN 482



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 202/452 (44%), Gaps = 14/452 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+   +N+      +    + A  +F++MRQ+G++PD  +Y  LI    K G  D A  
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEV 434

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              QM  + V+ D+V++S+L+     +  + K   +F  + + GI P++V +NT++    
Sbjct: 435 KFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K     E + L++ +   GV+PD +SY+TL++ +       EA  +   M  V    D  
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N ++  Y +      A   F  M   GI P VV+YNT+L    + + F EA  L+  M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
                + ++ TYN ++    KS   ++A  + Q + ++G++ N IT++ +I    K G+ 
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           + A  LF  + ++G+  + V Y+ ++      G +     L   + +  T P    +  L
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 376 AR----AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            R     G I  A     +  +     + S    +I +FS +          E    A  
Sbjct: 735 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSD----------EYQHHAKS 784

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
            P  + I    NS   +++    DD YS  +E
Sbjct: 785 LPKKYRILNEANSSALIKKARRIDDAYSLFRE 816



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/532 (21%), Positives = 209/532 (39%), Gaps = 69/532 (12%)

Query: 17   PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
            P++  +N +L N+ +  +      L D +   G+ PD  +Y+TLI      G  D A   
Sbjct: 481  PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 540

Query: 77   LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            L+ M    +  D   Y+ L+    K      A S F ++ S+GI P +V YNT+++   +
Sbjct: 541  LEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQ 600

Query: 137  AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
             K F EA+ L   M   G K D  +Y+ +LN   +++   EA+ +F  +      L++ T
Sbjct: 601  TKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIIT 660

Query: 197  CNIMIDVYGQLDMAKDA-----------------------------------DRLFWSMR 221
             NIMI    +    +DA                                   D LF +M 
Sbjct: 661  FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720

Query: 222  KMGIDPSVVSYNTLLR-VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY------ 274
            K G  P+    N L+R +    ++     +L +L +R        T + +I I+      
Sbjct: 721  KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN-FSVEASTTSMLISIFSSDEYQ 779

Query: 275  --GKSLEH--------------------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
               KSL                      + A +L +EM  +G+ P+ +TY+TI+    + 
Sbjct: 780  HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 313  GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
            G+   A  L+  + +S  +++   Y  ++    +   V  A ++   L     Q N I  
Sbjct: 840  GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 899

Query: 369  ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
               I  L + GR E+A  +F      G V D+  +  + E             +F  M  
Sbjct: 900  NIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK 959

Query: 429  AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            +G   DS ++  ++    +  +   A    S++ E+          +++SL+
Sbjct: 960  SGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLF 1011



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 171/388 (44%), Gaps = 11/388 (2%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V  YN +L  + + K++  A  L+  M   G   D YTY+ ++    K    D AI 
Sbjct: 585 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIK 644

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             Q +    +  +++ ++ +I    K      A+ +F+ + ++G+V ++V Y  ++    
Sbjct: 645 MFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           +    +E   L   M + G  P++   + L+   +       A +  ++++E N  ++ +
Sbjct: 705 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS 764

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T +++I ++   +    A  L    R +    +  + + L++   +A    +A  LFR M
Sbjct: 765 TTSMLISIFSSDEYQHHAKSLPKKYRIL----NEANSSALIK---KARRIDDAYSLFREM 817

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K +  +VVTYNT++    ++    +A  L   M N   + N  TY+ I+    K+  +
Sbjct: 818 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
           D A  +FQ L S G++++ + +  MI A  + G    A  L   +     +P      ++
Sbjct: 878 DEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLV 937

Query: 376 A----RAGRIEEATWVFRQAFDAGEVKD 399
           A      G +EE   +F     +G   D
Sbjct: 938 AENLIEEGSLEEFDGLFLTMEKSGTPLD 965



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/353 (20%), Positives = 147/353 (41%), Gaps = 19/353 (5%)

Query: 18   SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
            +V  Y +V+ N++     E    LF  M + G AP+    + L+      G    A ++L
Sbjct: 692  NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 751

Query: 78   QQMEQDRVSGDLVLYSNLI------ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             ++++   S +    S LI      E         K   I +   SS ++          
Sbjct: 752  SKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK--------- 802

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
                KA+   +A  L  EM  +G+ PD V+Y+T+L+   +  +F EA  ++  M      
Sbjct: 803  ----KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +++ T NI+++   + +   +A ++F S+   G+  +++++N ++    +     +A+ L
Sbjct: 859  MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            F  +    +  +VVTY  + +   +    E+   L   M+  G   ++   + ++    +
Sbjct: 919  FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQ 978

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
             G + RA     KL      ++      +I  + R     HAK L  + R  N
Sbjct: 979  RGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLN 1031



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 88/201 (43%)

Query: 16   SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
            +P V  YN +L  + +  ++  A  L+  M       + YTY+ ++    K    D A  
Sbjct: 823  TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFK 882

Query: 76   WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              Q +    +  +++ ++ +I    K      A+ +F+ + ++G+VPD+V Y  +     
Sbjct: 883  MFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLI 942

Query: 136  KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +    +E   L   M + G   D+   + L+   ++      A +  ++++E N  L+ +
Sbjct: 943  EEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAS 1002

Query: 196  TCNIMIDVYGQLDMAKDADRL 216
            T + +I ++ + +    A  L
Sbjct: 1003 TTSELISLFSRGEYQHHAKSL 1023


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 182/401 (45%), Gaps = 4/401 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P VFAYN V+    +  Q E A  + + M+ RG  PD  TY+ +I          
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L Q+  D     ++ Y+ LIE        ++A+ +   + + G++PD+  YN +I
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K  + + A  LI  +  +G +PD +SY+ LL  ++   K+ E   + AEM    C 
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T +I+I    +     +A  +   M +  + P   SY+ L+    +      AI +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       ++V YNT++    K+    +A  +  +++  G  PN  +Y+T+I+    
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G   RA  +   + S G++ D + Y ++I    R GLV  A  LL ++ Q    P  I 
Sbjct: 440 CGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 499

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
               +  L +  RI++A  +F +  + G   + + +  +IE
Sbjct: 500 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 207/479 (43%), Gaps = 9/479 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L    +A ++  +    + +  +G  PD    + LI  F      + A S + ++ +  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 142

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
              D+  Y+ +I    K++    A  + +R+K+ G +PD+V YN MI      +    A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            +++++      P  ++Y+ L+   +      EA+ +  EM       D+ T N +I   
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +  M + A  L  S+   G +P V+SYN LLR +     + E   L   M  +  E N 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTY+ +I    +    ++A ++++ M  + + P+  +Y  +I+   K G+LD A  +   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGR 380
           + S+G   D V Y T++ A  + G    A  + ++LR     PN     T I+ L   G 
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
              A  +       G   D   +  +I    R+      I + + M  +G+ P      +
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM---LSLYGARKD-FNMLESLFER 495
           VL    K+R  + A  +++EM E+GC  ++  +  +   +   G R +   +  SLF R
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 158/354 (44%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +       A  L +EM  RG+ PD YTY+ +I    KEGM + A   
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  +       D++ Y+ L+        + +   + + + S G  P+ V Y+ +I+   +
Sbjct: 275 ITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  +++ M E+ + PDT SY  L++   +  +   A+ +   M    C  D+  
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  +R MG  P+V SYNT++           A+ +   M 
Sbjct: 395 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 454

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K I+ + +TYN++I    +    E+A  L+ +M+  G  P  I+Y+ ++    K  ++D
Sbjct: 455 SKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 514

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            A  +F ++   G   +   Y  +I      G    A  L + L   + I +++
Sbjct: 515 DAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 568



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 99/194 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P  ++Y+ ++  + +  + +LA G+ D M   G  PD   Y+T++    K G  +
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    ++       ++  Y+ +I       D S+A+ +   + S GI PD + YN++I
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLI 469

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +  L +EA  L+++M + G +P  +SY+ +L    +  +  +A+ +FAEM E  C 
Sbjct: 470 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 529

Query: 192 LDLTTCNIMIDVYG 205
            + TT  ++I+  G
Sbjct: 530 PNETTYILLIEGIG 543



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +LD + E++ + P+V +YN+VL  + + ++ + A G+F EM ++G  P+  TY  LI
Sbjct: 481 AIGLLDDM-EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539

Query: 62  TCFGKEGMFDSAISWLQQM-EQDRVSGD 88
              G  G    A+     +  +D +S D
Sbjct: 540 EGIGFAGWRTEAMELANSLFSRDVISQD 567


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 34  QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYS 93
           +W L   L +EM+ +G+ P+ YTY+ +I    K G    A   L++M  + ++ D V+Y+
Sbjct: 205 EWVLK--LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 262

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
            LI+   KL + S A  +F  ++   I PD + Y  +I    +     EA  L  EM  +
Sbjct: 263 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322

Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
            ++PD V+Y+ L++ Y +  K  EA S+  +M ++    ++ T   + D   +      A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382

Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
           + L   M + G++ ++ +YN+L+    +A    +A+ L + M+      + VTY T++  
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 274 YGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEID 333
           Y KS E  +A  L+++M +R ++P  +T++ ++  +  +G L+    L + +   G+  +
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502

Query: 334 PVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFR 389
              Y ++I  Y     +     +   +     +P      IL     +A  ++EA ++ R
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562

Query: 390 QAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
                G    +S +  +I+ F + KK+    E+FE+MR  G   D  I
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 187/410 (45%), Gaps = 4/410 (0%)

Query: 109 ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
           + +   ++  G+ P+   YN +I +  K     EA  ++ EM  +G+ PD V Y+TL++ 
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 169 YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
           + +      A  +F EM +     D  T   +I    Q     +AD+LF  M    ++P 
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            V+Y  L+  Y +     EA  L   M +  +  N+VTY  +     K  E + A  L+ 
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 289 EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
           EM  +G+E N  TY++++    KAG +D+A  L + +  +G   D V Y T++ AY +  
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 349 LVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFG 404
            +  A  LL ++     QP  +     +     +G +E+   + +   + G + + + + 
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 405 CMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
            +I+ +          E++  M + G  PD +   +++  + K R  + A  L+ +M  +
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 465 GCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
           G   +   +  ++  +  RK F     LFE++  +  +  +E++++ A I
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 617



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 161/327 (49%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++ + SP    Y  V+  + +  +   A  LF EM  + + PD  TY+ LI  + KEG  
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A S   QM Q  ++ ++V Y+ L +   K  +   A  +   +   G+  ++  YN++
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           +N   KA    +A  L+++M   G  PD V+Y+TL++ Y ++ + V A  +  +M +   
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
              + T N++++ +    M +D ++L   M + GI P+  +YN+L++ Y           
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           ++R M  K +  +  TYN +IK + K+   ++A  L ++M  +G      +Y+ +I  + 
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLY 337
           K  K   A  LF+++R  G+  D  +Y
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIY 611



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 168/389 (43%), Gaps = 4/389 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    Y  ++    +      A+ LFDEM++R I+PD  TY+ +I    + G    A  
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
              +M   R+  D V Y+ LI+   K     +A S+ +++   G+ P++V Y  + +   
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K      A  L+ EM  +G++ +  +Y++L+N   +     +A+ +  +M       D  
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T   ++D Y +      A  L   M    + P+VV++N L+  +  + +  +   L + M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             K I  N  TYN++IK Y         T + + M  +G+ P+  TY+ +I    KA  +
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 554

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL 375
             A  L + +   G  +    Y  +I  + +      A+ L  ++R+   +       I 
Sbjct: 555 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614

Query: 376 A----RAGRIEEATWVFRQAFDAGEVKDI 400
           A      G++E    +  +A +   V DI
Sbjct: 615 ADINYDEGKMELTLELCDEAIEKCLVGDI 643



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 141/303 (46%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           R  P    Y  ++    +  + + A  L ++M Q G+ P+  TY+ L     K G  D+A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
              L +M +  +  ++  Y++L+    K  +  +A+ +   ++ +G  PD V Y T+++ 
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + K++    A  L+ +M ++ ++P  V+++ L+N +  +    +   +   M E     +
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            TT N +I  Y   +  +    ++  M   G+ P   +YN L++ + +A    EA  L R
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            M  K     V +YN +IK + K  +  +A  L ++M+  G+  +   Y+    I    G
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 622

Query: 314 KLD 316
           K++
Sbjct: 623 KME 625



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 4/193 (2%)

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +L+ E    L++EMQ +G++PN  TY+ +I +  K GK+  A  + +++ S G+  D V+
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260

Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y T+I  + ++G V+ A RL  E+++    P+ I     I  L + GR+ EA  +F +  
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                 D   +  +I+ + +  K      +  +M   G  P+      + +   K  E +
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380

Query: 453 TADDLYSEMQEEG 465
           TA++L  EM  +G
Sbjct: 381 TANELLHEMCRKG 393



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A + P    Y  ++    ++++   AH L  +M  R + P   T++ L+  F   GM 
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           +     L+ M +  +  +   Y++LI+     ++      I+  + + G+VPD   YN +
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I    KA+  KEA  L  +M  +G      SY+ L+  + +  KF+EA  +F +M     
Sbjct: 545 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604

Query: 191 PLDLTTCNIMIDV 203
             D    NI  D+
Sbjct: 605 VADREIYNIFADI 617


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 215/490 (43%), Gaps = 40/490 (8%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P V   N VLR +  A +W+    + +EM Q GI P   TY+TL+  F KEG  D    
Sbjct: 166 APDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAM 225

Query: 76  WLQQMEQDRVS------------------GDLVLYSNLIE---LARKLSDYS-------- 106
            L++ME                       GDL   + L+E   L++K S ++        
Sbjct: 226 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGL 285

Query: 107 -------KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDT 159
                  K   +   +++ GI+P +V YN MI+   ++ L + A++   EMR  G+ PD 
Sbjct: 286 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 345

Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
           ++Y++LLN Y +     EAL +F ++        + T NI ID Y +L   ++A  L   
Sbjct: 346 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEE 405

Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
           M + G  P+V +Y  L++          A   F  M  K ++ +   YNT I       +
Sbjct: 406 MGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 465

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
             +A  L + +   GI  + +TY+ +I    K G L  A  L  K+ S+G++ D + Y  
Sbjct: 466 IARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 525

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAG 395
           +I A+   GL+  A+++ + +     +P     T++     R G +  A   FR+  + G
Sbjct: 526 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 585

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              +   +  +I    R  +       F +M   G   + +   L+++   K+  +E A 
Sbjct: 586 VEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAM 645

Query: 456 DLYSEMQEEG 465
             Y EM + G
Sbjct: 646 RFYFEMHQNG 655



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 166/385 (43%), Gaps = 35/385 (9%)

Query: 18  SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
           S F YN ++  +L     +  + L  EM   GI P   TY+ +I    + G+ ++A    
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 78  QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
            +M    +  D++ Y++L+    K  +  +A+ +F  L+ +G+ P ++ YN  I+ + + 
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRL 393

Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLL-------NLYVENHKFVEALS------VFA- 183
              +EAR+L EEM EQG  P+  +Y+ L+       +L +    F E LS       FA 
Sbjct: 394 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAY 453

Query: 184 -----------------EMNEV----NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
                            E+ EV        D  T NI+I    +    KDA  L   M  
Sbjct: 454 NTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 513

Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
            G+ P  ++Y  L+  + E  L  EA  +F  M    +  + VT+  +I  Y +      
Sbjct: 514 NGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYS 573

Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
           A    ++M   G+EPN ITY+ +I    + G+   A+  F ++   G+  +   Y  +I 
Sbjct: 574 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLID 633

Query: 343 AYERVGLVAHAKRLLHELRQPNTIP 367
              +VG    A R   E+ Q    P
Sbjct: 634 GNCKVGNWEDAMRFYFEMHQNGIHP 658



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 195/459 (42%), Gaps = 45/459 (9%)

Query: 63  CFGKEGMFDSA----ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS 118
           C  ++   D+     +S  ++M    V+ D+   ++++   R  + +    ++   +   
Sbjct: 139 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQL 198

Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEM--REQGVKPDTVSYSTLLNL-------- 168
           GI P +V YNT+++ F K     +  +L++EM  R  G  P+ V+Y+ ++          
Sbjct: 199 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 258

Query: 169 ----YVENHKFVEALSVFA----------------------EMNEVNCPLDLTTCNIMID 202
                VE  +  +  S F                       EM        + T N MI 
Sbjct: 259 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 318

Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
              Q  + + A   F  MR MG+ P V++YN+LL  Y +A    EA+ LF  ++R  +  
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 378

Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
            V+TYN  I  Y +  + E+A  L +EM  +G  PN  TY+ ++        L  A   F
Sbjct: 379 TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFF 438

Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
            ++ S G++ D   Y T I A   +G +A A    + L+ E    +T+     I  L + 
Sbjct: 439 DEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKT 498

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           G +++A  +  +    G   D   + C+I             ++F  M S G  P +   
Sbjct: 499 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 558

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
            +++++Y +     +A   + +M EEG V  +++ + +L
Sbjct: 559 TVIIHAYCRRGNLYSAYGWFRKMLEEG-VEPNEITYNVL 596



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 159/340 (46%), Gaps = 10/340 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P V  YN +L    +A   + A  LF ++R+ G+AP   TY+  I  + + G  + A   
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
            ++M +     ++  Y+ L++ +  +   + A   F  + S G+ PD  AYNT I    +
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI--CAE 460

Query: 137 AKLFKEARLLIEEMRE----QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             L   AR L  E+RE    +G+  DTV+Y+ L++   +     +A  +  +M       
Sbjct: 461 LILGDIARAL--ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 518

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
           D  T   +I  + +  + ++A ++F +M   G+ PS V++  ++  Y        A   F
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
           R M  + +E N +TYN +I    +    + A++   EM  RG+  N  TY+ +I    K 
Sbjct: 579 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 638

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           G  + A   + ++  +G+  D + ++ ++  ++  G V H
Sbjct: 639 GNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFD--GHVHH 676



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 171/398 (42%), Gaps = 24/398 (6%)

Query: 108 AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN 167
            +S F  + S G+ PD+   N ++     A  + +   + EEM + G++P  V+Y+TLL+
Sbjct: 153 CLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLD 212

Query: 168 LYVENHKFVEALSVFAEMNE--VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
            +++  +  +   +  EM      C  +  T N++I    +    ++A  L   MR +  
Sbjct: 213 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSK 271

Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
             S  +YN L+          +   L   M+ + I   VVTYN MI    +S   E A  
Sbjct: 272 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
              EM+  G+ P+ ITY++++  + KAG L  A +LF  LR +G+    + Y   I  Y 
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYC 391

Query: 346 RVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
           R+G +  A+ L  E+ +   +P     TIL +      +  + R+ FD    K     G 
Sbjct: 392 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK-----GL 446

Query: 406 MIELFSRNKK---------YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
             + F+ N +          A  +E+ E +   G   D+    ++++   K    + A +
Sbjct: 447 QPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKE 506

Query: 457 LYSEMQEEG----CVFSD---QVHFQMLSLYGARKDFN 487
           L  +M   G    C+        H +   L  ARK FN
Sbjct: 507 LQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 544



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 41/239 (17%)

Query: 1   RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
           R V +L+ I      S     YN+++  + +    + A  L  +M   G+ PD  TY+ L
Sbjct: 473 REVLMLEGI------SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCL 526

Query: 61  ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
           I    + G                          L+  ARK         IF+ + S G+
Sbjct: 527 IHAHCERG--------------------------LLREARK---------IFNNMISDGL 551

Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
           +P  V +  +I+ + +      A     +M E+GV+P+ ++Y+ L++      +   A  
Sbjct: 552 LPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASH 611

Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            F EM E     +  T  ++ID   ++   +DA R ++ M + GI P  +++  L++ +
Sbjct: 612 HFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 208/464 (44%), Gaps = 17/464 (3%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P  + YN VL+ +  AKQWE A  L  EM +    P+  T++T I  F + G+ D A+ 
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            L+QM +   + D+++YS L+      S++ +       L +    P+ V YN  +    
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLV---NGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLC 120

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            A  ++E   LI EM  +   P+  ++STL+N   +N     A+ V  +M +     D+ 
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           + N +I  +     A DA +L   ++ M   P  +S+N +L+   +A+ + +A+ L   M
Sbjct: 181 SYNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
            +K+   N +T+N +I    ++ + + A  + + M      P+ +TYS++I  + + G L
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG-L 296

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI- 374
           D   M F   RS     D   Y   +           A  L+ ++   + +P E    I 
Sbjct: 297 DE--MAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 375 ---LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
              L + G +  A  V+ Q    G   DI  +  +I  +S   +  + ++    M     
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE-- 412

Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
            PD+     +L    +   ++ A+ L +EM  + C   ++V F+
Sbjct: 413 -PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCT-PNEVTFK 454



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 8/280 (2%)

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
           +  +  TYNT++K    + + E+A  LM+EM      PN +T++T I  + + G LDRA 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETAITILARA 378
            L +++   G   D ++Y T++  +   G V  A +LL+  L +PNT+    A+  L  A
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 122

Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
           GR EE   +  +        + + F  +I    +N+     +EV E+M+  GY PD    
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML--SLYGARKDFNMLESLFERL 496
             +++ +    +   ADD    ++   C   D + F  +   L  A++ ++ +E + + L
Sbjct: 183 NTIISCFS---DQARADDALKLLKSMLCK-PDTISFNAVLKCLCKAKRWYDAVELVAKML 238

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRT 536
             D  IN+   + ++  + +   ++ DA  +   M K R 
Sbjct: 239 KKDCRINEMTFNILIDSLCQNG-QVKDAIEVFELMPKYRC 277



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 150/367 (40%), Gaps = 40/367 (10%)

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
           + PD   YNT++     AK +++A  L+ EM      P+ V+++T +  + +N       
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQN------- 55

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
                                    G LD A +   L   M K G  P V+ Y+TL+  +
Sbjct: 56  -------------------------GLLDRAVE---LLEQMPKYGCTPDVIIYSTLVNGF 87

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
            E     EA+ L   M  +    N V YN  +K    +   E+   L+ EM  +   PN 
Sbjct: 88  SEHGRVDEALKLLNTMLCRP---NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPND 144

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
            T+ST+I    +   ++ A  + ++++  G   D V Y T+I  +        A +LL  
Sbjct: 145 ATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKS 204

Query: 360 -LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
            L +P+TI     +  L +A R  +A  +  +        +   F  +I+   +N +  +
Sbjct: 205 MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD 264

Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
            IEVFE M      PD    + ++N + +    E A DL+  M     +FS     + L 
Sbjct: 265 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLC 324

Query: 479 LYGARKD 485
           +  AR D
Sbjct: 325 M-AARWD 330



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/413 (21%), Positives = 167/413 (40%), Gaps = 36/413 (8%)

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
           V+ D   Y+ +++       + +A  +   +  +   P+ V + T I  F +  L   A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF---------------------- 182
            L+E+M + G  PD + YSTL+N + E+ +  EAL +                       
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 122

Query: 183 ----------AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY 232
                     AEM   +CP +  T + +I+   Q  + + A  +   M+K G  P VVSY
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 233 NTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
           NT++  + +     +A+ L + M  K    + +++N ++K   K+     A  L+ +M  
Sbjct: 183 NTIISCFSDQARADDALKLLKSMLCKP---DTISFNAVLKCLCKAKRWYDAVELVAKMLK 239

Query: 293 RGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAH 352
           +    N +T++ +I    + G++  A  +F+ +       D V Y ++I  +   GL   
Sbjct: 240 KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM 299

Query: 353 AKRLLHELR-QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFS 411
           A  L   +  + +       +  L  A R ++A  +         + +   F  +I    
Sbjct: 300 AFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 359

Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
           +       I+V+E+M   G  PD      ++N Y +    + A    S M  E
Sbjct: 360 QKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE 412



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 3/153 (1%)

Query: 19  VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
           +F+YN  L+ +  A +W+ A  L  +M      P+  T++ LI+   ++G+ + AI   +
Sbjct: 313 IFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYE 372

Query: 79  QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
           QM +  ++ D+  Y+ LI    +      A+   S +      PD ++YN+++    +A+
Sbjct: 373 QMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAE 429

Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVE 171
            +K+A  L+ EM  +   P+ V++     L+++
Sbjct: 430 RWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462


>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1429

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 195/400 (48%), Gaps = 2/400 (0%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++A+  +I  E+    +V  YN ++    R  ++    G+ D MR+RG  PD  +++TLI
Sbjct: 193 ALAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLI 252

Query: 62  TCFGKEGMF--DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
               K G    + AI  L ++ +  +  D++ Y+ LI    + S+  +A+ +F  +++  
Sbjct: 253 NARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHY 312

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
             PDL  YN MI+V+G+     +A  L +E+  +G  PD V+Y++LL  +       +  
Sbjct: 313 CQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVK 372

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            +  EM ++    D  T N +I +YG+      A +L+  M+  G  P  ++Y  L+   
Sbjct: 373 EICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSL 432

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
           G+A    EA ++   M    ++  + TY+ +I  Y ++ +  +A      M+  GI P+ 
Sbjct: 433 GKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQ 492

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           + YS ++ ++ +  +  +A ML++++   G+  DP +Y  M+    R   V   +R++ +
Sbjct: 493 LAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRD 552

Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
           + +   +  +   +IL +    E+A  + R A    +  D
Sbjct: 553 MEEVCGMNPQAIASILVKGECYEDAAGMLRLAISGSDEID 592



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 222/503 (44%), Gaps = 60/503 (11%)

Query: 31  RAKQW-ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM----FDSAISWLQQMEQDRV 85
           RAK W E    L D  R  G+ PD++    L     K  M    F   + W+ Q    R 
Sbjct: 104 RAKDWRERVKFLTD--RILGLRPDQFVADVLDD--SKVQMTPTDFCFVVKWVGQENWQRA 159

Query: 86  -------------SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
                        S +  + + ++ +  K +  + A+ IF R +S+ +   +  YN M+ 
Sbjct: 160 LEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFIRAEST-VDNTVQVYNAMMG 218

Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
           V+ +   F + + +++ MRE+G +PD VS++TL+N  ++                     
Sbjct: 219 VYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAM----------------- 261

Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
              T N+ I++  ++             R+ G+ P +++YNTL+          EA+ +F
Sbjct: 262 ---TPNVAIELLNEV-------------RRSGLRPDIITYNTLISACSRESNLEEAVKVF 305

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             M+    + ++ TYN MI +YG+     KA  L +E++++G  P+A+TY++++  + + 
Sbjct: 306 DDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFARE 365

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
           G +D+   +  ++   G   D + Y T+I  Y + G    A +L  ++    R P+ I  
Sbjct: 366 GNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITY 425

Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
              I  L +A ++ EA  V  +  + G    +  +  +I  ++R  +     E F+ MR 
Sbjct: 426 TVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRR 485

Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           +G  PD    +++L+ + +  E   A  LY EM  +G      V+  ML   G       
Sbjct: 486 SGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVED 545

Query: 489 LESLFERLDSDSNINKKELHHVV 511
           ++ +   ++    +N + +  ++
Sbjct: 546 IQRIIRDMEEVCGMNPQAIASIL 568



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 176/397 (44%), Gaps = 35/397 (8%)

Query: 24   VVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQD 83
             V+    + K W+ A  L   +RQR    DR  ++ LI  +   G ++ A +    M +D
Sbjct: 740  AVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRD 799

Query: 84   RVSGD----------LVLYSNLIELA-------------------------RKLSDYSKA 108
              S            L++   L EL                           ++S+ ++A
Sbjct: 800  GPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEA 859

Query: 109  ISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNL 168
              I+  +K++G  P +  Y  MI +  K K  ++   ++ EM E G +PD   ++++L L
Sbjct: 860  KKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRL 919

Query: 169  YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS 228
            Y     F + + ++  + E     D  T N +I +Y +    ++   L   MR++G++P 
Sbjct: 920  YTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPK 979

Query: 229  VVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQ 288
            + +Y +L+  +G+ +L  +A  LF  +  K  + +   Y+ M+KIY  S  H KA  L+ 
Sbjct: 980  LDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLS 1039

Query: 289  EMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
             M++ G+EP   T   ++  +G +G+   A  +   L+  G+ +  + Y ++I AY +  
Sbjct: 1040 MMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNK 1099

Query: 349  LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEAT 385
              +   + L E+++    P     T   RA  + E T
Sbjct: 1100 DYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHT 1136



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 200/444 (45%), Gaps = 48/444 (10%)

Query: 38   AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA-----ISWLQQMEQDRVSGDLVLY 92
            A  +F +MR  G+ P +  Y +++  + K G  ++A     ++ ++ M  D++S D+ + 
Sbjct: 683  ASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAV- 741

Query: 93   SNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
               IE   KL  + KA S+   L+      D   +N +I  +  +  +++AR +   M  
Sbjct: 742  ---IETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMR 798

Query: 153  QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
             G  P   S + LL   + + +  E   V  E+ ++   +  ++  +++D + ++    +
Sbjct: 799  DGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAE 858

Query: 213  ADRLFWSMR-----------------------------------KMGIDPSVVSYNTLLR 237
            A +++  M+                                   + G  P +  +N++LR
Sbjct: 859  AKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLR 918

Query: 238  VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
            +Y   + F + + +++ ++   ++ +  TYNT+I +Y +    E+  +LM EM+  G+EP
Sbjct: 919  LYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEP 978

Query: 298  NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL 357
               TY ++IA +GK   +  A  LF++L S G ++D   Y  M+  Y   G  + A++LL
Sbjct: 979  KLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLL 1038

Query: 358  HELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRN 413
              ++     P    + +L      +G+ +EA  V     + G       +  +I+ + +N
Sbjct: 1039 SMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKN 1098

Query: 414  KKYANVIEVFEKMRSAGYFPDSHI 437
            K Y+  I+   +M+  G  PD  I
Sbjct: 1099 KDYSVGIQKLVEMKKEGLEPDHRI 1122



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 143/295 (48%)

Query: 38   AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
            A  ++  M+  G  P  + Y  +I    K        + + +ME+     DL ++++++ 
Sbjct: 859  AKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLR 918

Query: 98   LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
            L   + D+ K + I+ R+K  G+ PD   YNT+I ++ +    +E   L+ EMR  G++P
Sbjct: 919  LYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEP 978

Query: 158  DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
               +Y +L+  + +    V+A  +F E+      LD +  +IM+ +Y        A++L 
Sbjct: 979  KLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLL 1038

Query: 218  WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
              M+  G++P++ + + L+  YG +    EA  +   ++   +  + + Y+++I  Y K+
Sbjct: 1039 SMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKN 1098

Query: 278  LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
             ++      + EM+  G+EP+   ++  I     +     A +L Q L+ SG ++
Sbjct: 1099 KDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFDL 1153



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 114/532 (21%), Positives = 229/532 (43%), Gaps = 28/532 (5%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P++  Y+ ++    RA Q   A   FD MR+ GI PD+  YS ++  F +      A+  
Sbjct: 455 PTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMML 514

Query: 77  LQQMEQDRVSGDLVLYSNLIE-LAR--KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
            ++M +D ++ D  +Y  ++  L R  K+ D  + I     +   G+ P  +A     ++
Sbjct: 515 YREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEV--CGMNPQAIA-----SI 567

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF-------AEMN 186
             K + +++A  ++        + D+ +  ++L+ Y  + +  EAL +        ++ N
Sbjct: 568 LVKGECYEDAAGMLRLAISGSDEIDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSN 627

Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
           ++     + T      +   L    D     W         S   Y +L++   E E   
Sbjct: 628 QLVAEASIVTLCKAKQLDAALKEYNDTREFDW------FTGSCTMYESLIQCCEENEFTA 681

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS-TI 305
           EA  +F  M+   ++ +   Y +M+ +Y K    E A  L+   +  G+  + I+    +
Sbjct: 682 EASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAV 741

Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
           I  +GK     +A  L   LR     +D  ++  +I AY   G    A+ + + + +   
Sbjct: 742 IETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGP 801

Query: 366 IPRETAITILARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
            P   +I  L +A    GR+EE   V ++  D G     S    +++ F+R    A   +
Sbjct: 802 SPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKK 861

Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
           +++ M++AGYFP  H+  +++    K +     + + +EM+E G      +   ML LY 
Sbjct: 862 IYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYT 921

Query: 482 ARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 533
              DF     +++R+  D     ++ ++ +  +Y R +R  +   +M+ M +
Sbjct: 922 GIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRR 973



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 135/284 (47%)

Query: 13   ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
            A Y P++  Y +++  + + K+      +  EM + G  PD   +++++  +     F  
Sbjct: 869  AGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRK 928

Query: 73   AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
             +   Q++++D +  D   Y+ LI +  +     +  S+   ++  G+ P L  Y ++I 
Sbjct: 929  TVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIA 988

Query: 133  VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
             FGK +L  +A  L EE+  +G K D   Y  ++ +Y  +    +A  + + M +     
Sbjct: 989  AFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEP 1048

Query: 193  DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             + T ++++  YG     ++A+++  ++++MG+  S + Y++++  Y + + +   I   
Sbjct: 1049 TIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKL 1108

Query: 253  RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIE 296
              M+++ +E +   +   I+    S     A  L+Q +Q+ G +
Sbjct: 1109 VEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFD 1152



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/411 (18%), Positives = 175/411 (42%), Gaps = 42/411 (10%)

Query: 127  YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
            Y ++I    + +   EA  +  +MR  GVKP    Y +++ +Y +   F E      ++ 
Sbjct: 667  YESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCK-MGFPETAHYLIDLA 725

Query: 187  EV-NCPLDLTTCNI-MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
            E+   P D  + ++ +I+ YG+L + + A+ L  ++R+   +     +N L++ Y  +  
Sbjct: 726  EIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGC 785

Query: 245  FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
            +               EQ    +NTM++                     G  P   + + 
Sbjct: 786  Y---------------EQARAVFNTMMR--------------------DGPSPTVDSING 810

Query: 305  IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
            ++      G+L+   ++ Q+++  G +I       ++ A+ RV  +A AK++   ++   
Sbjct: 811  LLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAG 870

Query: 365  TIPR----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
              P        I +L +  R+ +   +  +  +AG   D+S++  M+ L++    +   +
Sbjct: 871  YFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTV 930

Query: 421  EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
            +++++++  G  PD      ++  Y +    E    L  EM+  G       +  +++ +
Sbjct: 931  QIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAF 990

Query: 481  GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
            G ++     E LFE L S  +   +  +H++  IY  +   + A ++++ M
Sbjct: 991  GKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMM 1041



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 2/229 (0%)

Query: 1    RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
            ++V I   I E+    P    YN ++    R  + E    L  EMR+ G+ P   TY +L
Sbjct: 928  KTVQIYQRIKEDG-LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSL 986

Query: 61   ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
            I  FGK+ +   A    +++       D   Y  ++++ R   ++SKA  + S +K +G+
Sbjct: 987  IAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGV 1046

Query: 121  VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
             P +   + ++  +G +   +EA  ++  ++E G+   T+ YS++++ Y++N  +   + 
Sbjct: 1047 EPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQ 1106

Query: 181  VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGID-PS 228
               EM +     D       I      +   DA  L  +++  G D PS
Sbjct: 1107 KLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFDLPS 1155



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 124/269 (46%), Gaps = 7/269 (2%)

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
           T++ + GK+ +   A  +    ++  ++     Y+ ++ ++ + G+ ++   +   +R  
Sbjct: 181 TILAVLGKANQEALAVEIFIRAEST-VDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRER 239

Query: 329 GVEIDPVLYQTMIVAYERVGLVAH--AKRLLHELRQ----PNTIPRETAITILARAGRIE 382
           G E D V + T+I A  + G +    A  LL+E+R+    P+ I   T I+  +R   +E
Sbjct: 240 GCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLE 299

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           EA  VF          D+  +  MI ++ R        ++F+++ S GYFPD+     +L
Sbjct: 300 EAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLL 359

Query: 443 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 502
            ++ +    +   ++ +EM + G +  +  +  ++ +YG +    +   L+  +      
Sbjct: 360 YAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRT 419

Query: 503 NKKELHHVVAGIYERANRLNDASRIMNRM 531
                + V+     +AN++ +A+ +M+ M
Sbjct: 420 PDAITYTVLIDSLGKANKMVEAANVMSEM 448


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 209/430 (48%), Gaps = 4/430 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           ++R  PS+  +  VL  + +  ++++   L+ +M   GI+ D Y+++ LI CF +     
Sbjct: 72  QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 131

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A++ L +M +      +V   +L+    + + + +A+S+   +   G VP++V YNT+I
Sbjct: 132 LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           N   K +    A  +   M ++G++ D V+Y+TL++    + ++ +A  +  +M +    
Sbjct: 192 NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 251

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++     +ID + +     +A  L+  M +  + P+V +YN+L+  +      G+A ++
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
           F LM  K    +VVTYNT+I  + KS   E    L  EM  +G+  +A TY+T+I  + +
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIP 367
           AGKL+ A  +F ++   GV  D V Y  ++      G +  A  ++ +L++     + I 
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
               I  L R  +++EA  +FR     G   D   +  MI    R        ++  +M+
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491

Query: 428 SAGYFPDSHI 437
             G+ P   I
Sbjct: 492 EDGFMPSERI 501



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 214/459 (46%), Gaps = 10/459 (2%)

Query: 26  LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
           LRN L   +++ A  LF EM Q    P    ++ ++T   K   FD  I    +ME   +
Sbjct: 51  LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 110

Query: 86  SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
           S DL  ++ LI    + S  S A+++  ++   G  P +V   +++N F +   F+EA  
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170

Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
           L++ M   G  P+ V Y+T++N   +N     AL VF  M +     D  T N +I    
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230

Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                 DA RL   M K  IDP+V+ +  L+  + +     EA +L++ M R+ +  NV 
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
           TYN++I  +        A  +   M ++G  P+ +TY+T+I  + K+ +++    LF ++
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350

Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRI 381
              G+  D   Y T+I  Y + G +  A+++ + +      P+ +     +  L   G+I
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410

Query: 382 EEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
           E+A  V  +     E+  DI  +  +I+   R  K      +F  +   G  PD+  IA 
Sbjct: 411 EKA-LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA--IAY 467

Query: 441 VLNSYGKLREF--ETADDLYSEMQEEGCVFSDQVHFQML 477
           +    G  R+     AD L   M+E+G + S++++ + L
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 123/268 (45%)

Query: 14  RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
           +  P+V  +  ++   ++      A  L+ EM +R + P+ +TY++LI  F   G    A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308

Query: 74  ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                 M       D+V Y+ LI    K       + +F  +   G+V D   YNT+I+ 
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368

Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
           + +A     A+ +   M + GV PD V+Y+ LL+    N K  +AL +  ++ +    +D
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           + T NI+I    + D  K+A  LF S+ + G+ P  ++Y T++       L  EA  L R
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
            M+      +   Y+  ++ +  SL  E
Sbjct: 489 RMKEDGFMPSERIYDETLRDHYTSLSAE 516



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 150/396 (37%), Gaps = 74/396 (18%)

Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
           F +A  L  EM +    P  V ++ +L +  + +KF   + ++ +M  +    DL +  I
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
           +I  + +      A  L   M K+G  PS+V+  +LL  + +   F EA+          
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV---------- 169

Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
                                    +L+  M   G  PN + Y+T+I    K   L+ A 
Sbjct: 170 -------------------------SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204

Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
            +F  +   G+  D V Y T+I      G    A RLL ++ +    PN I     I   
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264

Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
            + G + EA  ++++      V ++  +  +I  F  +    +   +F+ M S G FPD 
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324

Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFER 495
                ++  + K +  E    L+ EM  +G             L G    +N L      
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQG-------------LVGDAFTYNTL------ 365

Query: 496 LDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
                      +H      Y +A +LN A ++ NRM
Sbjct: 366 -----------IHG-----YCQAGKLNVAQKVFNRM 385


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 181/401 (45%), Gaps = 4/401 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E+   P VFAYN V+    +  + E A  + + M+ RG  PD  TY+ +I          
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+  L Q+  D     ++ Y+ LIE        ++A+ +   + + G++PD+  YN +I
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K  + + A  LI  +  +G KPD +SY+ LL  ++   K+ E   + AEM    C 
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T +I+I    +     +A  +   M +  + P   SY+ L+    +      AI +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M       ++V YNT++    K+    +A  +  +++  G  PN  +Y+T+I+    
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
            G   RA  +   + S GV+ D + Y ++I    R GLV  A  LL ++ Q    P  I 
Sbjct: 430 CGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 489

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
               +  L +  RI++A  +F +  + G   + + +  +IE
Sbjct: 490 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 206/479 (43%), Gaps = 9/479 (1%)

Query: 25  VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
           +L    +A ++  +    + +  +G  PD    + LI  F      + A S + ++ +  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 132

Query: 85  VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
              D+  Y+ +I    K++    A  + +R+K+ G +PD+V YN MI      +    A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
            +++++      P  ++Y+ L+   +      EA+ +  EM       D+ T N +I   
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
            +  M + A  L  S+   G  P V+SYN LLR +     + E   L   M  +  E N 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQK 324
           VTY+ +I    +    ++A ++++ M  + + P+  +Y  +I+   K G+LD A  +   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 325 LRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGR 380
           + S+G   D V Y T++ A  + G    A  + ++LR     PN     T I+ L   G 
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 381 IEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIAL 440
              A  +       G   D   +  +I    R+      I + + M  +G+ P      +
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 441 VLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM---LSLYGARKD-FNMLESLFER 495
           VL    K+R  + A  +++EM E+GC  ++  +  +   +   G R +   +  SLF R
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 158/354 (44%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V  Y +++   +       A  L +EM  RG+ PD YTY+ +I    KEGM + A   
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           +  +       D++ Y+ L+        + +   + + + S G  P+ V Y+ +I+   +
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
                EA  +++ M E+ + PDT SY  L++   +  +   A+ +   M    C  D+  
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384

Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
            N ++    +   A  A  +F  +R MG  P+V SYNT++           A+ +   M 
Sbjct: 385 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 444

Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
            K ++ + +TYN++I    +    E+A  L+ +M+  G  P  I+Y+ ++    K  ++D
Sbjct: 445 SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 504

Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
            A  +F ++   G   +   Y  +I      G    A  L + L   + I +++
Sbjct: 505 DAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 99/194 (51%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   +P  ++Y+ ++  + +  + +LA G+ D M   G  PD   Y+T++    K G  +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A+    ++       ++  Y+ +I       D S+A+ +   + S G+ PD + YN++I
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLI 459

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           +   +  L +EA  L+++M + G +P  +SY+ +L    +  +  +A+ +FAEM E  C 
Sbjct: 460 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 519

Query: 192 LDLTTCNIMIDVYG 205
            + TT  ++I+  G
Sbjct: 520 PNETTYILLIEGIG 533



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           ++ +LD + E++ + P+V +YN+VL  + + ++ + A G+F EM ++G  P+  TY  LI
Sbjct: 471 AIGLLDDM-EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529

Query: 62  TCFGKEGMFDSAISWLQQM-EQDRVSGD 88
              G  G    A+     +  +D +S D
Sbjct: 530 EGIGFAGWRTEAMELANSLFSRDVISQD 557


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 221/500 (44%), Gaps = 54/500 (10%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-------RGIAPDRYTYSTLITCF 64
           E +Y   +  YN +L ++ R        GL DEM+Q         + P+ YTY+ ++  +
Sbjct: 176 ELKYKLIIGCYNTLLNSLAR-------FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228

Query: 65  GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
            K G  + A  ++  + +  +  D   Y++LI    +  D   A  +F  +   G   + 
Sbjct: 229 CKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNE 288

Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
           VAY  +I+     +   EA  L  +M++    P   +Y+ L+     + +  EAL++  E
Sbjct: 289 VAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348

Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
           M E     ++ T  ++ID        + A  L   M + G+ P+V++YN L+  Y +  +
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
             +A+ +  LM+ + +  N  TYN +IK Y K   H KA  ++ +M  R + P+ +TY++
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNS 467

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPN 364
           +I    ++G  D A  L   +   G+  DP  Y +MI +  +   V  A  L   L Q +
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527

Query: 365 TIPRETAITIL----ARAGRIEEATWVFRQ-----------AFDA--------GEVKD-- 399
            IP     T L     +AG++ EA  +  +            F+A        G++K+  
Sbjct: 528 VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEAT 587

Query: 400 --------------ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
                         +S    +I    ++  + +    F++M S+G  PD+H     + +Y
Sbjct: 588 LLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 446 GKLREFETADDLYSEMQEEG 465
            +    + A+D+ ++M+E G
Sbjct: 648 CREGRLQDAEDMVAKMKENG 667



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 219/469 (46%), Gaps = 15/469 (3%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           EE    P++  Y V++ ++    + E A  L  +M ++G+ P+  TY+ LI  + K GM 
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+  ++ ME   +  +   Y+ LI+   K  +  KA+ + +++    ++PD+V YN++
Sbjct: 410 EDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+   ++  F  A  L+  M ++G+ PD  +Y+++++   ++ +  EA  +F  + + + 
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV 528

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             ++     +ID Y +     +A  +   M      P+ +++N L+          EA  
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL 588

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           L   M + +++  V T   +I    K  + + A    Q+M + G +P+A TY+T I  + 
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G+L  A  +  K++ +GV  D   Y ++I  Y  +G    A  +L  +      P + 
Sbjct: 649 REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQH 708

Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
             T L+    + E  +        G+VK      C++   S   ++  V+E+ EKM   G
Sbjct: 709 --TFLSLIKHLLEMKY--------GKVKGGEPGVCVM---SNMMEFDIVVELLEKMVEHG 755

Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE-EGCVFSDQVHFQMLS 478
             P++     ++    ++     A+ ++  MQ+ EG   S+ V   +LS
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 219/485 (45%), Gaps = 34/485 (7%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+   YN +++   + +    A G+ ++M +R + PD  TY++LI    + G FDSA   
Sbjct: 426 PNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L  M    +  D   Y+++I+   K     +A  +F  L+   ++P++V Y  +I+ + K
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           A    EA L++E+M  +   P++++++ L++    + K  EA  +  +M +++    ++T
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604

Query: 197 CNIMIDVYGQLDMAKDAD-----RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             I+I       + KD D     R F  M   G  P   +Y T ++ Y       +A  +
Sbjct: 605 DTILIH-----RLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA--IW 309
              M+   +  ++ TY+++IK YG       A  +++ M + G EP+  T+ ++I   + 
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719

Query: 310 GKAGKL----------------DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
            K GK+                D    L +K+   GV  +   Y+ +++    +G +  A
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779

Query: 354 KRLLHELRQPNTI-PRETAI-TILARAGRIE---EATWVFRQAFDAGEVKDISVFGCMIE 408
           +++   ++Q   I P E     +L+   ++E   EA  V       G +  +     +I 
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839

Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
              +  +      VF+ +   GY+ D     ++++  GK    E   +L++ M++ GC F
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTF 899

Query: 469 SDQVH 473
           S Q +
Sbjct: 900 SSQTY 904



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 156/363 (42%), Gaps = 27/363 (7%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+    P+V  Y  ++    +A +   AH + ++M  +   P+  T++ LI     +G  
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 71  DSAISWLQQME----QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
             A    ++M     Q  VS D +L   L+    K  D+  A   F ++ SSG  PD   
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLL----KDGDFDHAYRRFQQMLSSGTKPDAHT 639

Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
           Y T I  + +    ++A  ++ +M+E GV PD  +YS+L+  Y +  +   A  V   M+
Sbjct: 640 YTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699

Query: 187 EVNC-PLDLTTCNIMIDV----YGQLDMAKDA-------------DRLFWSMRKMGIDPS 228
           +  C P   T  +++  +    YG++   +                 L   M + G+ P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPN 759

Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLM 287
             SY  L+    E      A  +F  MQ+KE I  + + +N ++    K  +H +A  ++
Sbjct: 760 AKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVV 819

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            +M   G  P   +   +I    K G+ +R   +FQ L   G   D + ++ +I    + 
Sbjct: 820 DDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQ 879

Query: 348 GLV 350
           GLV
Sbjct: 880 GLV 882



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/435 (21%), Positives = 176/435 (40%), Gaps = 73/435 (16%)

Query: 111 IFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
           ++  +    + P++  YN M+N + K    +EA   +  + E G+ PD  +Y++L+  Y 
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYC 264

Query: 171 ENHKFVEALSVFAEMNEVNCPLDLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDP 227
           +      A  VF EM    C  +      +I    V  ++D A D   LF  M+     P
Sbjct: 265 QRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMD---LFVKMKDDDCYP 321

Query: 228 SVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLM 287
           +V +Y  L++    +E   EA++L + M+ K I+ N+ TY  +I       + EKA  L+
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381

Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
            +M  +G+ PN ITY+ +I  + K G ++ A  + + + S  +  +   Y  +I  Y   
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY--- 438

Query: 348 GLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
                 KR +H+                        A  V  +  +   + D+  +  +I
Sbjct: 439 -----CKRNVHK------------------------AMGVLNKMLERKVLPDVVTYNSLI 469

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
           +   R+  + +   +   M   G  PD      +++S  K +  E A DL+  ++++  V
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD-V 528

Query: 468 FSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
             + V +  L                                 + G Y +A ++N+A  +
Sbjct: 529 IPNVVMYTAL---------------------------------IDG-YCKAGKVNEAHLM 554

Query: 528 MNRMNKRRTFNSSLV 542
           + +M  +    +SL 
Sbjct: 555 LEKMLSKNCLPNSLT 569


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 229/502 (45%), Gaps = 39/502 (7%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
           +V +L  +  +    P+ F+YNVV+  + RA +   A  +FDEM +R + P+  TY+T+I
Sbjct: 179 AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 238

Query: 62  TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
               K G  ++  S   QM    +  + + Y+ L+    +     +  ++   + S  +V
Sbjct: 239 DGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 298

Query: 122 PDLVAYN-------------TMINVFGKA-----------------KLFKEARLLIEE-- 149
           PD   Y+              M+++FGK+                  L K+ ++ I E  
Sbjct: 299 PDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 358

Query: 150 ---MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
              +   G+ P  V Y+TL+N Y +  +   A S F +M   +   D  T N +I+   +
Sbjct: 359 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 418

Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
            +   +A  L   M+  G++P+V ++NTL+  YG      +   +   MQ   ++ NVV+
Sbjct: 419 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 478

Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           Y +++  + K+ +  +A  ++ +M ++ + PNA  Y+ II  + + G  D+A +L +K++
Sbjct: 479 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 538

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
           S+G+    V Y  +I        ++ A+ +++ L      P+ +   T I+     G I+
Sbjct: 539 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 598

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
           +A  + ++    G    +  +  +I       +   +  +++KM      P + I  +++
Sbjct: 599 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMV 658

Query: 443 NSYGKLREFETADDLYSEMQEE 464
            +Y K      A+DL  EM ++
Sbjct: 659 EAYSKYGNEIKAEDLRKEMLQK 680



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/554 (19%), Positives = 238/554 (42%), Gaps = 41/554 (7%)

Query: 5   ILDWINEEARYS-PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
           +L  + +EAR   PS+ + N++L  +L   +       F  +   G  PD + ++  +  
Sbjct: 110 LLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQA 169

Query: 64  FGKEGMFDSAISWLQQMEQDRV--------------------SGDLV------------- 90
               G    A+  L++M +D                       GD V             
Sbjct: 170 CVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLP 229

Query: 91  ---LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
               Y+ +I+   K  D     S+  ++   G+ P+ + YN +++   +A    E   L+
Sbjct: 230 NHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 289

Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
           +EM  Q + PD  +YS L +    N      LS+F +  +    +   TC+I+++   + 
Sbjct: 290 DEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKD 349

Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
                A+ +  S+   G+ P+ V YNTL+  Y +      A   F  M+ + I+ + +TY
Sbjct: 350 GKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITY 409

Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
           N +I    K+     A +L+ EMQ+ G+ P   T++T+I  +G+ G+L++  ++  +++ 
Sbjct: 410 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 469

Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEE 383
           +G++ + V Y +++ A+ + G +  A  +L ++   + +P       +  A    G  ++
Sbjct: 470 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 529

Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
           A  +  +    G    I  +  +I+      + +   E+   + +    PD+     +++
Sbjct: 530 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 589

Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
           +       + A DL   M + G   + + + Q++S  G       +E L++++  ++ + 
Sbjct: 590 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVP 649

Query: 504 KKELHHVVAGIYER 517
              +H+++   Y +
Sbjct: 650 SNAIHNIMVEAYSK 663


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 209/430 (48%), Gaps = 4/430 (0%)

Query: 12   EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
            ++R  PS+  +  VL  + +  ++++   L+ +M   GI+ D Y+++ LI CF +     
Sbjct: 597  QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 656

Query: 72   SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
             A++ L +M +      +V   +L+    + + + +A+S+   +   G VP++V YNT+I
Sbjct: 657  LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 716

Query: 132  NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
            N   K +    A  +   M ++G++ D V+Y+TL++    + ++ +A  +  +M +    
Sbjct: 717  NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 776

Query: 192  LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
             ++     +ID + +     +A  L+  M +  + P+V +YN+L+  +      G+A ++
Sbjct: 777  PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 836

Query: 252  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            F LM  K    +VVTYNT+I  + KS   E    L  EM  +G+  +A TY+T+I  + +
Sbjct: 837  FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 896

Query: 312  AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQP----NTIP 367
            AGKL+ A  +F ++   GV  D V Y  ++      G +  A  ++ +L++     + I 
Sbjct: 897  AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 956

Query: 368  RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
                I  L R  +++EA  +FR     G   D   +  MI    R        ++  +M+
Sbjct: 957  YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016

Query: 428  SAGYFPDSHI 437
              G+ P   I
Sbjct: 1017 EDGFMPSERI 1026



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 212/458 (46%), Gaps = 8/458 (1%)

Query: 26   LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
            LRN L   +++ A  LF EM Q    P    ++ ++T   K   FD  I    +ME   +
Sbjct: 576  LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 635

Query: 86   SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
            S DL  ++ LI    + S  S A+++  ++   G  P +V   +++N F +   F+EA  
Sbjct: 636  SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 695

Query: 146  LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
            L++ M   G  P+ V Y+T++N   +N     AL VF  M +     D  T N +I    
Sbjct: 696  LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 755

Query: 206  QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
                  DA RL   M K  IDP+V+ +  L+  + +     EA +L++ M R+ +  NV 
Sbjct: 756  NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815

Query: 266  TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
            TYN++I  +        A  +   M ++G  P+ +TY+T+I  + K+ +++    LF ++
Sbjct: 816  TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875

Query: 326  RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRI 381
               G+  D   Y T+I  Y + G +  A+++ + +      P+ +     +  L   G+I
Sbjct: 876  TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935

Query: 382  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
            E+A  +      +    DI  +  +I+   R  K      +F  +   G  PD+  IA +
Sbjct: 936  EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA--IAYI 993

Query: 442  LNSYGKLREF--ETADDLYSEMQEEGCVFSDQVHFQML 477
                G  R+     AD L   M+E+G + S++++ + L
Sbjct: 994  TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 1031



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 209/446 (46%), Gaps = 16/446 (3%)

Query: 30  LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
           L + ++E A  LF EM      P    ++ L+T       +++ I + Q+ME   +S DL
Sbjct: 47  LHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL 106

Query: 90  VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
             ++ LI    + S  S A+S+  ++   G  P +V + ++++ F       +A  L+  
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166

Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
           M + G +P+ V Y+TL++   +N +   AL +  EM +     D+ T N ++        
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226

Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
             DA R+   M K  I+P VV++  L+ V+ +     EA  L++ M +  ++ N VTYN+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286

Query: 270 MIK---IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
           +I    ++G+  + +K  +L   M ++G  PN +TY+T+I+ + K   +D    LFQ++ 
Sbjct: 287 IINGLCMHGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIE 382
             G   D   Y T+I  Y +VG +  A  +   +      P+ I     +  L   G IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH---IIA 439
            A   F    ++ +   I  +  MI    +  K     E+F ++   G  PD+    I+ 
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 440 LVLNSYGKLREFETADDLYSEMQEEG 465
           L L   G  RE   AD+L   M+EEG
Sbjct: 464 LGLCKNGPRRE---ADELIRRMKEEG 486



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 162/357 (45%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y PS+  +  +L       +   A  L   M + G  P+   Y+TLI    K G  + A+
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L +ME+  +  D+V Y+ L+        +S A  +   +    I PD+V +  +I+VF
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            K     EA+ L +EM +  V P+ V+Y++++N    + +  +A   F  M    C  ++
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            T N +I  + +  M  +  +LF  M   G +  + +YNTL+  Y +      A+ +F  
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M  + +  +++T+  ++     + E E A     +M+        + Y+ +I    KA K
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +++A  LF +L   GV+ D   Y  MI+   + G    A  L+  +++   I +  A
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 178/384 (46%), Gaps = 4/384 (1%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           S  ++++ +++    R  +   A  +  +M + G  P   T+ +L+  F        A S
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
            +  M +     ++V+Y+ LI+   K  + + A+ + + ++  G+  D+V YNT++    
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
            +  + +A  ++ +M ++ + PD V+++ L++++V+     EA  ++ EM + +   +  
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T N +I+         DA + F  M   G  P+VV+YNTL+  + +  +  E + LF+ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342

Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
             +    ++ TYNT+I  Y +  +   A ++   M +R + P+ IT+  ++      G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402

Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI- 374
           + A + F  +R S   I  V Y  MI    +   V  A  L   L      P     TI 
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 375 ---LARAGRIEEATWVFRQAFDAG 395
              L + G   EA  + R+  + G
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEG 486



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 47/326 (14%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E+      V  YN +L  +  + +W  A  +  +M +R I PD  T++ LI  F K+G  
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
           D A    ++M Q  V  + V Y+++I    +  +L D  K    F  + S G  P++V Y
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT---FDLMASKGCFPNVVTY 319

Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
           NT+I+ F K ++  E   L + M  +G   D  +Y+TL++ Y +  K   AL +F     
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC---- 375

Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAEL 244
                                         W + +  + P ++++  LL    V GE E 
Sbjct: 376 ------------------------------WMVSRR-VTPDIITHCILLHGLCVNGEIE- 403

Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
              A+  F  M+  E    +V YN MI    K+ + EKA  L   +   G++P+A TY+ 
Sbjct: 404 --SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461

Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGV 330
           +I    K G    A  L ++++  G+
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGI 487



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/552 (21%), Positives = 224/552 (40%), Gaps = 76/552 (13%)

Query: 6   LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
            D + E  +Y   + AYN+++  + +A + E A  LF  +   G+ PD  TY+ +I    
Sbjct: 409 FDDMRESEKYI-GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467

Query: 66  KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS-----IFSRLKSSG- 119
           K G    A   +++M+++ +   +    + +E   + S  +K IS     I+ R KS+  
Sbjct: 468 KNGPRREADELIRRMKEEGIICQMNAEDDHLE---EHSSSNKEISLSLREIWERSKSNPF 524

Query: 120 ----IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH-- 173
               ++P  +A+++ +  F      +   LL+E    +G  P+T    +       +H  
Sbjct: 525 WMQRLIP--IAFSSSVKGF-----VRRHYLLLE----RGNNPETSLSRSFSGASHHHHYR 573

Query: 174 ----------KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
                     KF +A S+F EM +      +     ++ V  +++       L+  M  +
Sbjct: 574 ERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL 633

Query: 224 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
           GI   + S+  L+  +        A+ L   M +     ++VT  +++  + +    ++A
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 693

Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
            +L+  M   G  PN + Y+T+I    K   L+ A  +F  +   G+  D V Y T+I  
Sbjct: 694 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 753

Query: 344 YERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
               G    A RLL ++ +    PN I     I    + G + EA  ++++      V +
Sbjct: 754 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 813

Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
           +  +  +I  F  +    +   +F+ M S G FPD      ++  + K +  E    L+ 
Sbjct: 814 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 873

Query: 460 EMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERAN 519
           EM  +G             L G    +N L                 +H      Y +A 
Sbjct: 874 EMTYQG-------------LVGDAFTYNTL-----------------IHG-----YCQAG 898

Query: 520 RLNDASRIMNRM 531
           +LN A ++ NRM
Sbjct: 899 KLNVAQKVFNRM 910



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 123/268 (45%)

Query: 14   RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
            +  P+V  +  ++   ++      A  L+ EM +R + P+ +TY++LI  F   G    A
Sbjct: 774  KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833

Query: 74   ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
                  M       D+V Y+ LI    K       + +F  +   G+V D   YNT+I+ 
Sbjct: 834  KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893

Query: 134  FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
            + +A     A+ +   M + GV PD V+Y+ LL+    N K  +AL +  ++ +    +D
Sbjct: 894  YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 953

Query: 194  LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
            + T NI+I    + D  K+A  LF S+ + G+ P  ++Y T++       L  EA  L R
Sbjct: 954  IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 1013

Query: 254  LMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
             M+      +   Y+  ++ +  SL  E
Sbjct: 1014 RMKEDGFMPSERIYDETLRDHYTSLSAE 1041


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/546 (21%), Positives = 239/546 (43%), Gaps = 39/546 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           +  ++P+V  Y  V+  + +A+  + A G+F  M  +G+ P+ +TY+ LI  +   G + 
Sbjct: 195 DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWK 254

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY---- 127
             +  LQ+M    +  D  +Y+ L++   K    ++A +IF  +   GI P++  Y    
Sbjct: 255 EVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILL 314

Query: 128 -------------------------------NTMINVFGKAKLFKEARLLIEEMREQGVK 156
                                          N M   + K  +  EA  + ++MR+Q + 
Sbjct: 315 HGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLS 374

Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
           P+ V+Y  L++   +  +  +A+  F +M +     D+   + ++     +D  + A+ L
Sbjct: 375 PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEEL 434

Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
           F+ +   GI    V +NTL+          EA  L  LM R  +  +V++YNT++  +  
Sbjct: 435 FFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCL 494

Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
           +   ++A  L+  + + G++P+ +TY+T++  + KA ++D A  LF+++   G+  D V 
Sbjct: 495 TGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVT 554

Query: 337 YQTMIVAYERVGLVAHAKRL----LHELRQPNTIPRETAITILARAGRIEEATWVFRQAF 392
           Y T++    + G  + AK L    ++   Q N       I  L +   ++EA  +F    
Sbjct: 555 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLC 614

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
                 DI     MI    +  +  + +++F  + + G  PD     L+  +  K    E
Sbjct: 615 SKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 674

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVA 512
             D+L+S M+E G   + ++   ++     R D N   +   +LD  +   +     ++ 
Sbjct: 675 ELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734

Query: 513 GIYERA 518
            IY R 
Sbjct: 735 SIYSRG 740



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 181/448 (40%), Gaps = 49/448 (10%)

Query: 2   SVAILDWINEEARYSPSVFAYNVVLRNVLRAK---QWELAHGLFDEMRQRG---IAPDRY 55
           ++ + D +   AR   SV A+N +L  V RA+     EL   LF+ M +     +AP  +
Sbjct: 35  ALKLFDEMLTHAR-PASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 56  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 115
           TY+ LI CF + G      +    +                                  L
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLI----------------------------------L 119

Query: 116 KSSGIVPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
           K+   V D V ++ ++     AK   EA  +L+  M E G  PD  SYS LL  +    +
Sbjct: 120 KTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKR 179

Query: 175 FVEAL---SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVS 231
             EAL   S+ A+  + +   ++ T   +ID   +  M   A  +F  M   G+ P+  +
Sbjct: 180 AEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239

Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
           Y  L+  Y     + E + + + M    ++ +   Y  ++    K+    +A N+   + 
Sbjct: 240 YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVI 299

Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
            +GI+PN   Y  ++  +   G L         +  +GV  D  ++  M  AY +  ++ 
Sbjct: 300 RKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID 359

Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
            A  +  ++RQ    PN +     I  L + GR+++A   F Q  D G   DI VF  ++
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419

Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDS 435
                  K+    E+F ++   G   D+
Sbjct: 420 YGLCTVDKWEKAEELFFEVLDQGIRLDT 447



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/339 (18%), Positives = 138/339 (40%), Gaps = 15/339 (4%)

Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA---IHLFRLMQRK---EIEQNVV 265
           DA +LF  M       SV ++N LL     A     +   + LF  M R+   ++  +  
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN-AITYSTIIAIWGKAGKLDRAA-MLFQ 323
           TY  +I  + +    +        +   G   N  + +S ++     A ++D A  +L +
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153

Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-------RQPNTIPRETAITILA 376
           ++   G   D   Y  ++  +        A  LL  +         PN +   T I  L 
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
           +A  ++ A  VF+   D G   +   + C+I  +    K+  V+++ ++M + G  PD +
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           I A++L+   K      A +++  +  +G   +  ++  +L  Y      + + S  + +
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR 535
             +       + +++   Y +   +++A  I ++M ++R
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 230/521 (44%), Gaps = 41/521 (7%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E   S +V  YN ++  + RA   E A G   EM   G+ PD +TY  +I    K G  D
Sbjct: 271 ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPD 330

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
            A   L +M    +  ++V+YS LI+   +  +  +A  I   + ++G+ P+ + Y+ +I
Sbjct: 331 QAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLI 390

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
               K      A  ++++M + G   DT++Y+ ++  ++  H   EA  +  EM +    
Sbjct: 391 RGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            ++ T +I+I+   Q+  ++ A  L   M   G+ P+   Y  L+  Y     F  A   
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACET 510

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            + M R+ +  ++  YN++I       + ++A     EM  +G +PN  TY  +I  +  
Sbjct: 511 LKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY------ERV------------------ 347
           AG L++A  L  ++ +SG+  +  +Y  ++  Y      E+V                  
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630

Query: 348 -GLVAH----------AKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAF 392
            G+V H          A  +L  + +    P+++   + I+   +A  +E+A  +  +  
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690

Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
             G    IS +  +I+ F ++   ++   +F  +   G  P+      +++ Y K  +  
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750

Query: 453 TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLF 493
            A DLY+EM  EG V  D   + +L+  G     ++ ++LF
Sbjct: 751 DAIDLYNEMLTEG-VAPDAFVYSVLAA-GCSNSGDLQQALF 789



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/529 (22%), Positives = 233/529 (44%), Gaps = 12/529 (2%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           E A  SP V+ Y+ ++    + +  E A  + +EMR+ G + +  TY+TLI    + G  
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A  + ++ME   +  D   Y  +I    K     +A  +   +  +G++P++V Y+T+
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I+ F +     EA  +++EM   GV+P+ ++Y  L+    +  +   A  +  +M ++  
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSY----NTLLRVYGEAELFG 246
             D  T N++I+ + +    ++A  L   MRK GI P+V +Y    N L ++ GE+E   
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI-GESE--- 470

Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
            A  L   M    ++ N   Y  +I  Y +      A   +++M    + P+   Y+++I
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQ 362
                 GK+D A   + ++   G + +   Y  +I  Y   G +  A++LLH++      
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590

Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
           PN       +    ++  +E+ +   +   + G + D  ++G +I   S +      + V
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650

Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
              +   G  PDS I   +++ + K  + E A  L  EM ++G       +  ++  +  
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCK 710

Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
             D +   ++F  +           +  +   Y +A  + DA  + N M
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 208/456 (45%), Gaps = 4/456 (0%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M   GI+PD YTYSTLI  + K    +SA   +++M +   S ++V Y+ LI    +   
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +A      ++  G+VPD   Y  +IN   K     +A+ L++EM   G+ P+ V YST
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           L++ ++      EA  +  EM+      +  T + +I    +L     A R+   M K+G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
                ++YN ++  +       EA  L   M++  I  NV TY+ +I    +  E E+A+
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+++M   G++PNA  Y+ +I+ + + G    A    +K+    +  D   Y ++I+  
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 345 ERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
             VG +  A      +L +  QPN       I   + AG +E+A  +  Q  ++G   + 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
            ++  ++E + ++     V    + M   G  PD+ +  +V+++       + A  + S 
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 461 MQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
           +++ G V    ++  ++S +    D      L + +
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM 689



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 11/379 (2%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+ F Y  ++    R   + LA     +M +  + PD Y Y++LI      G  D AI +
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
             +M +     +   Y  LI       +  KA  +  ++ +SG+ P+   Y  ++  + K
Sbjct: 546 YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFK 605

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLL-NLYVENH--KFVEALSVFAEMNEVNCPLD 193
           +   ++    ++ M E+G+ PD   Y  ++ NL    H    V  LSV  +   V  P  
Sbjct: 606 SDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLV--PDS 663

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
           L   +++       DM K A  L   M K GI+P +  YN L+  + +++    A ++F 
Sbjct: 664 LIYGSLISGFCKAADMEK-AVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
            +  K +  N VTY T+I  Y K+ +   A +L  EM   G+ P+A  YS + A    +G
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
            L +A  + +++ + G  I    + T++  + + G +    + LH +   + +P     E
Sbjct: 783 DLQQALFITEEMIARGYAIISS-FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVE 841

Query: 370 TAITILARAGRIEEATWVF 388
             +  L  AG++ EA  +F
Sbjct: 842 NIVIGLGEAGKLSEAHTIF 860



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 217/543 (39%), Gaps = 57/543 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           Y      YN+V+   LR    E A  L +EMR+ GI+P+ YTYS +I    + G  + A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
             L+QM  D +  +  +Y+ LI    +   +S A     ++    + PDL  YN++I   
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM-NEVNCPLD 193
                  EA    +EM E+G +P+  +Y  L++ Y       +A  +  +M N    P D
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
                I+ + Y + D  +       SM + G+ P    Y  ++     +     A+ +  
Sbjct: 594 FIYAQIL-EGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLS 652

Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
           ++++  +  + + Y ++I  + K+ + EKA  L+ EM  +GIEP    Y+ +I  + K+ 
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712

Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
            +  A  +F  +   G+  + V Y T+I  Y                             
Sbjct: 713 DISHARNIFNSIICKGLPPNCVTYTTLIDGY----------------------------- 743

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
              +AG I +A  ++ +    G   D  V+  +    S +      + + E+M + GY  
Sbjct: 744 --CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI 801

Query: 434 DSHIIALV--LNSYGKLRE----------------FETADDLYSEMQEEGCVFSDQVHFQ 475
            S    LV      GKL+E                  T +++   + E G +      F 
Sbjct: 802 ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFV 861

Query: 476 MLSLYGA-RKDFNMLESLFERLDSDSNINKKELH-----HVVAGIYERANRLNDASRIMN 529
            L    A  +D + L SLF  + +   +    +H     H   G  ++A  L+DA     
Sbjct: 862 ELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALMLHDALVAKG 921

Query: 530 RMN 532
           R N
Sbjct: 922 RAN 924



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 148/315 (46%), Gaps = 1/315 (0%)

Query: 12  EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
           E  + P+ F Y  ++     A   E A  L  +M   G+ P+ + Y+ ++  + K    +
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610

Query: 72  SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
              S L+ M +  +  D  LY  +I           A+S+ S ++ +G+VPD + Y ++I
Sbjct: 611 KVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLI 670

Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
           + F KA   ++A  L++EM ++G++P    Y+ L++ + ++     A ++F  +     P
Sbjct: 671 SGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLP 730

Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
            +  T   +ID Y +    +DA  L+  M   G+ P    Y+ L      +    +A+ +
Sbjct: 731 PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFI 790

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              M  +     + ++NT++  + K  + ++    +  M ++ I P+ +T   I+   G+
Sbjct: 791 TEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGE 849

Query: 312 AGKLDRAAMLFQKLR 326
           AGKL  A  +F +L+
Sbjct: 850 AGKLSEAHTIFVELQ 864



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 172/415 (41%), Gaps = 58/415 (13%)

Query: 113 SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN 172
           +RL  S   PD  A+  +      A L+ +A  L+++M      P  V  S         
Sbjct: 111 TRLAPSAPAPD--AFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSV-------- 160

Query: 173 HKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPS---- 228
           H+        +  ++   P+ L   ++++D Y +    +D   +   M+ +G+ PS    
Sbjct: 161 HR------ALSGSDQGRRPVVL---DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCC 211

Query: 229 -------------------------------VVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
                                          V +Y+TL+  Y +      A  +   M+ 
Sbjct: 212 NGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRE 271

Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
                NVVTYNT+I    ++   E+A    +EM++ G+ P+  TY  II    K G+ D+
Sbjct: 272 TGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQ 331

Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
           A  L  ++  +G+  + V+Y T+I  + R G    A +++ E+     QPN I  +  I 
Sbjct: 332 AKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIR 391

Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            L + GR+  A+ + +Q    G + D   +  +IE   R         +  +MR  G  P
Sbjct: 392 GLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISP 451

Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
           + +  ++++N   ++ E E A  L  +M  +G   +  V+  ++S Y     F++
Sbjct: 452 NVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSL 506


>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
 gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
          Length = 585

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 12/395 (3%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS- 75
           P     N+++  +    Q   A  + ++MR  G +P   T++TLI C     M+D AIS 
Sbjct: 191 PDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISF 250

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
           W +Q++      ++   + L++L  K     +A+ +   L   G  PD+V+YNT+I+V  
Sbjct: 251 WKEQLKLGWPPYEMT-STLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSC 309

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           KA   K A+L++  +  +G++P+  +Y  LL+   +  ++ E   + A M + N   D+T
Sbjct: 310 KAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVT 369

Query: 196 TCNIMIDV---YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
             NI I+    YG LD A D   +  + +     P +V+YNTLL    +  +  EA+ +F
Sbjct: 370 AYNIFINYFCRYGYLDQAIDVLEVMVNEKCF---PDIVTYNTLLNAISKRGMVEEALGIF 426

Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
             ++    +   +TYNT+I    K  E   A  L  EM   GI P+ +TY +++  + K 
Sbjct: 427 HSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKK 486

Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE--- 369
                A  L  ++ + G E+    +  MI +  +      A  +L  +   N   R    
Sbjct: 487 NMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFY 546

Query: 370 -TAITILARAGRIEEATWVFRQAFDAGEVKDISVF 403
            + +T +A++GR++EA  + ++   +  +K+ S F
Sbjct: 547 LSIVTRVAKSGRVKEAQILHQELVQSKVLKEASQF 581



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 166/393 (42%), Gaps = 6/393 (1%)

Query: 41  LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
           + DEM   G  PD      LI    + G  + A   L+ M       D +  + LI    
Sbjct: 145 VIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLC 204

Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
                S A+ +   ++ +G  P  + +NT+I       ++  A    +E  + G  P  +
Sbjct: 205 CEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPPYEM 264

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
           + + L++L  +    + AL V  E+    C  D+ + N +I V  +    K+A  +   +
Sbjct: 265 TSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHL 324

Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
              G++P+  +Y  LL    +   + E   L   M++   + +V  YN  I  + +    
Sbjct: 325 SAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCRYGYL 384

Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
           ++A ++++ M N    P+ +TY+T++    K G ++ A  +F  +R +G ++  + Y T+
Sbjct: 385 DQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQVVRITYNTL 444

Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAG- 395
           I A  + G V +A  L  E+      P+ +   + +    +    +EA  +  Q    G 
Sbjct: 445 IDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKEALELLNQMLALGF 504

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
           EVK  + F  MI+   +        E+   M S
Sbjct: 505 EVK-ATTFSMMIQSLCKGCNTEAAAEILRVMVS 536



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/394 (21%), Positives = 151/394 (38%), Gaps = 39/394 (9%)

Query: 107 KAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +A  +   +   G VPD      +I    +     +AR ++E M   G  PDT++ + L+
Sbjct: 141 QACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLI 200

Query: 167 NLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA-------KDADRLFW- 218
                  +   A+ V  +M    C     T N +I       M        K+  +L W 
Sbjct: 201 ARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWP 260

Query: 219 ------------------SMRKM---------GIDPSVVSYNTLLRVYGEAELFGEAIHL 251
                              MR +         G  P VVSYNTL+ V  +A     A  +
Sbjct: 261 PYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLI 320

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
              +  + +E N  TY  ++          +  +L+  M+    +P+   Y+  I  + +
Sbjct: 321 LTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCR 380

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT----IP 367
            G LD+A  + + + +     D V Y T++ A  + G+V  A  + H +R+       I 
Sbjct: 381 YGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQVVRIT 440

Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
             T I  LA+ G +  A  +F +    G   D   +G ++  F +       +E+  +M 
Sbjct: 441 YNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKEALELLNQML 500

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
           + G+   +   ++++ S  K    E A ++   M
Sbjct: 501 ALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVM 534



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 6/311 (1%)

Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
            Y+  L  +  N K ++A  V  EM       D   C  +I    +      A  +   M
Sbjct: 125 CYADSLRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVM 184

Query: 221 RKMGIDPSVVSYNTLL-RVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
              G  P  ++ N L+ R+  E +L   A+ +   M+      + +T+NT+I+       
Sbjct: 185 VLSGGVPDTITCNMLIARLCCEGQL-SSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHM 243

Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
           +++A +  +E    G  P  +T + ++ +  K     RA  +  +L   G + D V Y T
Sbjct: 244 YDRAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNT 303

Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATWVFRQAFDAG 395
           +I    + G + +AK +L  L      P  T   IL  +     R  E   +      A 
Sbjct: 304 LISVSCKAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQAN 363

Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
              D++ +   I  F R       I+V E M +   FPD      +LN+  K    E A 
Sbjct: 364 HKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEAL 423

Query: 456 DLYSEMQEEGC 466
            ++  ++E GC
Sbjct: 424 GIFHSIRENGC 434



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           ++A + P V AYN+ +    R    + A  + + M      PD  TY+TL+    K GM 
Sbjct: 360 KQANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMV 419

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
           + A+     + ++      + Y+ LI+   K  +   A+++F  +   GI PD V Y ++
Sbjct: 420 EEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSL 479

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLL 166
           +  F K  + KEA  L+ +M   G +    ++S ++
Sbjct: 480 VMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMI 515


>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
 gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
          Length = 674

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 178/361 (49%), Gaps = 36/361 (9%)

Query: 1   RSVAILDWINEEAR-YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYST 59
           +++A  +W+      Y  + + YNV+L+ +   +Q EL+  L +EM  RGI PD YT+ST
Sbjct: 124 KALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFST 183

Query: 60  LITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG 119
           LI C  +    + A+ W ++M+ + +  D V Y+++I++  ++   ++A+ ++ +LKS  
Sbjct: 184 LINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243

Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
              D V Y  + NV+ +A  ++    L++EMR+ G  P+ V  +TL+    +  K  +A 
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303

Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
            VF E                                   MR  G+ P+ V+ + L+ +Y
Sbjct: 304 KVFNE-----------------------------------MRTSGVSPTPVTLSILVEMY 328

Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
                + +A  ++  ++ +  + +V  YN+++K   +    E+A ++++EM+  G  P+ 
Sbjct: 329 TRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDH 388

Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
           +TY T +  +   G +D A  +F K+ +   + D  L+  MI A +  G +  A ++  E
Sbjct: 389 LTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDE 448

Query: 360 L 360
           +
Sbjct: 449 M 449



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 196/434 (45%), Gaps = 52/434 (11%)

Query: 94  NLIELARKLSDYSKAISIFSRLKSSGIVPDLV-----AYNTMINVFGKAKLFKEARLLIE 148
           N++ +   ++ + KA++ F  LK+    P+L       YN M+ +    +  + +  L+E
Sbjct: 111 NIVTVLNNINRWEKALAFFEWLKAR---PELYEINRYTYNVMLKILRNGRQLELSEKLVE 167

Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
           EM  +G++PD  ++STL+N      +  EAL                             
Sbjct: 168 EMTGRGIQPDNYTFSTLINCAKRCRQPEEAL----------------------------- 198

Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
                 + F  M+  GI P  V+YN+++ +YG      EA+ L+  ++    + + VTY 
Sbjct: 199 ------KWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYG 252

Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
            +  +Y ++ +++    L+QEM++ G  PNA+  +T++    KAGK+++A  +F ++R+S
Sbjct: 253 AIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTS 312

Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEA 384
           GV   PV    ++  Y RVG    A  +   L+    + +     + +      GR+E+A
Sbjct: 313 GVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQA 372

Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
             + ++   AG   D   +   +  ++          +F+K+ +    PD+ +  +++ +
Sbjct: 373 EDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRA 432

Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQ-VHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
                E E A  ++ EM E GC   D+ V   +LS     K+ +   ++ + LD  +   
Sbjct: 433 CKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKNDDERLAILDCLDKFN--- 489

Query: 504 KKELHHVVAGIYER 517
              LH +++ I  +
Sbjct: 490 -APLHELMSAIVRK 502



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 184/389 (47%), Gaps = 46/389 (11%)

Query: 15  YSPSVFAYNVV--LRNVLRAKQWELAHGLFDEMRQRG--IAPDRYTYSTLITCFGKEGMF 70
           +  S+ A N+V  L N+ R   WE A   F+ ++ R      +RYTY+ ++         
Sbjct: 103 WDKSLSAKNIVTVLNNINR---WEKALAFFEWLKARPELYEINRYTYNVML--------- 150

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
                             ++     +EL+ KL +          +   GI PD   ++T+
Sbjct: 151 -----------------KILRNGRQLELSEKLVE---------EMTGRGIQPDNYTFSTL 184

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           IN   + +  +EA    E M+ +G+ PD V+Y++++++Y    +  EA+ ++ ++  VN 
Sbjct: 185 INCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNW 244

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
            LD  T   + +VY +    +   +L   MR  G  P+ V  NTL+    +A    +A  
Sbjct: 245 KLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKK 304

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
           +F  M+   +    VT + ++++Y +   +++A  + + ++  G + +   Y++++    
Sbjct: 305 VFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACV 364

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
           + G++++A  + ++++ +G   D + Y+T +  Y   G+V  A+R+  ++   N  P   
Sbjct: 365 EGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTP 424

Query: 371 AITILAR----AGRIEEATWVFRQAFDAG 395
             T++ R    AG IE+A+ +F +  ++G
Sbjct: 425 LFTVMIRACKLAGEIEQASKIFDEMMESG 453



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 148/305 (48%), Gaps = 4/305 (1%)

Query: 231 SYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEM 290
           +YN +L++         +  L   M  + I+ +  T++T+I    +  + E+A    + M
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204

Query: 291 QNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLV 350
           ++ GI P+ +TY+++I ++G+ G+++ A  L++KL+S   ++D V Y  +   Y R G  
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDY 264

Query: 351 AHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCM 406
               +L+ E+R     PN +   T +  L++AG++ +A  VF +   +G          +
Sbjct: 265 QSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324

Query: 407 IELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
           +E+++R   Y    EV+E +++ G+  D  +   ++ +  +    E A+D+  EM+  GC
Sbjct: 325 VEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGC 384

Query: 467 VFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
                 +   ++ Y  +   +    +F+++ + +      L  V+    + A  +  AS+
Sbjct: 385 NPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASK 444

Query: 527 IMNRM 531
           I + M
Sbjct: 445 IFDEM 449



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 84/175 (48%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           SP+    N ++  + +A +   A  +F+EMR  G++P   T S L+  + + G +D A  
Sbjct: 280 SPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFE 339

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
             + ++ +    D+ +Y++L++   +     +A  I   +K +G  PD + Y T +N + 
Sbjct: 340 VYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYA 399

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
              +   AR + +++     KPDT  ++ ++       +  +A  +F EM E  C
Sbjct: 400 TKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGC 454


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 202/457 (44%), Gaps = 47/457 (10%)

Query: 15  YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
           + P  + +N ++    R  Q ++A  LFD+M  RG A D  +Y+TLI    + G  D A+
Sbjct: 6   WRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV 65

Query: 75  SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
               +M+Q     D+ +Y+ L++         + + +  R+K  G  P   AY  +++  
Sbjct: 66  ELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFR 121

Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
            + +  KEA  +++EM E+G+ P  V+ + ++N Y +  +  +AL V   M    C  ++
Sbjct: 122 CRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNV 181

Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR---VYGEAELFGEAIHL 251
            T N ++  +        A  L   MR  G++P  V+YN L+R   + G  E    A  L
Sbjct: 182 WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE---SAFRL 238

Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
            RLM+   +  +  TYN +I    K    ++A +L   ++ RGI+PNA+T++++I    K
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
           +GK D A    +K+ S+G   D   Y + I    ++         + E+ Q +  P    
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358

Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
            TI+                               I    + + Y  V   + +M S+G 
Sbjct: 359 YTIV-------------------------------IHKLLKERNYGLVARTWGEMVSSGC 387

Query: 432 FPDSHIIALVLNSY---GKLREFETADDLYSEMQEEG 465
            PD       + +Y   G+L E   A+++  EM + G
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNE---AENVLMEMSKNG 421



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/479 (20%), Positives = 209/479 (43%), Gaps = 20/479 (4%)

Query: 11  EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
           +E  + PS  AY  V+    R ++ + A  +  EM ++G+AP   T + +I  + KEG  
Sbjct: 103 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 162

Query: 71  DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
             A+  L+ M+      ++  Y+ L++         KA+++ +++++ G+ PD V YN +
Sbjct: 163 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222

Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
           I         + A  L+  M   G+  D  +Y+ L+N   ++ +  +A S+F  +     
Sbjct: 223 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI 282

Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
             +  T N +I+   +   A  A +    M   G  P   +Y++ +    + +   E + 
Sbjct: 283 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 342

Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
               M +K+++ + V Y  +I    K   +        EM + G  P+ +TY+T +  + 
Sbjct: 343 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 402

Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
             G+L+ A  +  ++  +GV +D + Y T++  +  +G   HA  +L ++    ++P + 
Sbjct: 403 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 462

Query: 371 AITILARA---GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
              IL R     R+ E       A     ++   VFG                 +F+ M+
Sbjct: 463 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG-----------------LFDVMK 505

Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
              + P+S   + +L  + +    E A  L S M+E+    ++ ++  +++ +   K +
Sbjct: 506 KNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 564



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 174/426 (40%), Gaps = 43/426 (10%)

Query: 45  MRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSD 104
           M + G  PD YT+++LI  + +    D A     +M     + D+V Y+ LIE   +   
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
             +A+ +F  +      PD+  Y  ++     A+  +E  L++  M+E G +P T +Y+ 
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMG 224
           +++      K                                   AK+A+ +   M + G
Sbjct: 117 VVDFRCRERK-----------------------------------AKEAEEMLQEMFEKG 141

Query: 225 IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 284
           + P VV+   ++  Y +     +A+ +  LM+ +  + NV TYN +++ +    +  KA 
Sbjct: 142 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 201

Query: 285 NLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY 344
            L+ +M+  G+ P+A+TY+ +I      G ++ A  L + +   G+  D   Y  +I A 
Sbjct: 202 TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINAL 261

Query: 345 ERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDI 400
            + G    A  L   L     +PN +   + I  L ++G+ + A     +   AG   D 
Sbjct: 262 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDT 321

Query: 401 SVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
             +   IE   + K     +    +M      P +    +V++   K R +      + E
Sbjct: 322 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE 381

Query: 461 MQEEGC 466
           M   GC
Sbjct: 382 MVSSGC 387



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 184/419 (43%), Gaps = 18/419 (4%)

Query: 17  PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
           P+V+ YN +++      +   A  L ++MR  G+ PD  TY+ LI     +G  +SA   
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238

Query: 77  LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
           L+ ME D +  D   Y+ LI    K     +A S+F  L++ GI P+ V +N++IN   K
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
           +     A   +E+M   G  PDT +YS+ +    +     E LS   EM + +  +  +T
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD--VKPST 356

Query: 197 CNIMIDVYGQLDMAKDA--DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
            N  I ++  L         R +  M   G +P VV+Y T +R Y       EA ++   
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M +  +  + + YNT++  +    + + A +++++M +    PN  TY  ++        
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL-------- 468

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
                ++  +L    + + P      I   +  GL    K+  +E   PN+    + +  
Sbjct: 469 ---RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK--NEF-LPNSGTYSSILEG 522

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
            +  GR EEAT +     +     +  ++  ++  F ++K+Y +   +   M   G+ P
Sbjct: 523 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 581



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 21/394 (5%)

Query: 16  SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
           +P    YN+++R        E A  L   M   G+  D+YTY+ LI    K+G  D A S
Sbjct: 213 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 272

Query: 76  WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
               +E   +  + V +++LI    K      A     ++ S+G  PD   Y++ I    
Sbjct: 273 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332

Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
           K K  +E    I EM ++ VKP TV+Y+ +++  ++   +      + EM    C  D+ 
Sbjct: 333 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 392

Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
           T    +  Y       +A+ +   M K G+    ++YNTL+  +        A+ + + M
Sbjct: 393 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 452

Query: 256 QRKEIEQNVVTYNTMIKIY-----------------GKSLEHEKATNLMQEMQNRGIEPN 298
                  N  TY  +++                    K++E      L   M+     PN
Sbjct: 453 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 512

Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
           + TYS+I+  + + G+ + A  L   ++   + ++  +Y  ++  + +      A  L+ 
Sbjct: 513 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 572

Query: 359 ELRQPNTIPR----ETAITILARAGRIEEATWVF 388
            + Q   IP+    +  ++ L   G+ ++A  +F
Sbjct: 573 SMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 606



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/294 (20%), Positives = 127/294 (43%), Gaps = 12/294 (4%)

Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
           M R     +  T+N++I  Y ++ + + A +L  +M  RG   + ++Y+T+I    +AG+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
           +D A  LF ++    + +   L + +  A      +   +R+     +P+T      +  
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
             R  + +EA  + ++ F+ G    +     +I  + +  + ++ + V E M+  G  P+
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFE 494
                 ++  +    +   A  L ++M+  G V  D V + +L + G   D + +ES F 
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACG-VNPDAVTYNLL-IRGQCIDGH-IESAFR 237

Query: 495 RL---DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRR------TFNS 539
            L   + D  I  +  ++ +     +  R + A  + + +  R       TFNS
Sbjct: 238 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.135    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,781,451,285
Number of Sequences: 23463169
Number of extensions: 308849963
Number of successful extensions: 1072398
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8835
Number of HSP's successfully gapped in prelim test: 3975
Number of HSP's that attempted gapping in prelim test: 818621
Number of HSP's gapped (non-prelim): 83536
length of query: 542
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 394
effective length of database: 8,886,646,355
effective search space: 3501338663870
effective search space used: 3501338663870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)