BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038401
(542 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/534 (82%), Positives = 502/534 (94%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
RS+A+LDW++EEA+Y+PSVFAYNVVLRNVLRAKQ+++AHGLFDEMRQR +APDRYTYSTL
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
IT FGKEGMFDSA+SWLQ+MEQDRVSGDLVLYSNLIEL+R+L DYSKAISIFSRLK SGI
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
PDLVAYN+MINV+GKAKLF+EARLLI+EM E GV P+TVSYSTLL++YVENHKF+EALS
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
VFAEM EVNC LDLTTCNIMIDVYGQLDM K+ADRLFWS+RKM I+P+VVSYNT+LRVYG
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
EAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKATNL+QEMQ+RGIEPNAI
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
TYSTII+IWGKAGKLDRAA LFQKLRSSGVEID VLYQTMIVAYERVGL+ HAKRLLHEL
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
+ P+ IPRETAITILA+AGR EEATWVFRQAF++GEVKDISVFGCMI L+SRN++Y NVI
Sbjct: 497 KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 556
Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
EVFEKMR+AGYFPDS++IA+VLN+YGK REFE AD +Y EMQEEGCVF D+VHFQMLSLY
Sbjct: 557 EVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 616
Query: 481 GARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
++KDF M+ESLF+RL+SD N+N KELH VVA +YERA++LNDASR+MNRM +R
Sbjct: 617 SSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 670
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 41 LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
+F++MR G PD + ++ +GK+ F+ A + ++M+++ ++ ++ L
Sbjct: 558 VFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYS 617
Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV-KP 157
D+ S+F RL+S V + + ++ +A +A ++ MRE+G+ KP
Sbjct: 618 SKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 221 bits (564), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 234/433 (54%), Gaps = 4/433 (0%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P+ +N ++ + + A L D M RG PD +TY T++ K G D A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
S L++ME+ ++ D+V+Y+ +I+ + + A+++F+ + + GI P++V YN++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
+ +A L+ +M E+ + P+ V++S L++ +V+ K VEA ++ EM + + D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T + +I+ + D +A +F M P+VV+YNTL++ + +A+ E + LFR
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M ++ + N VTYNT+I+ ++ + + A + ++M + G+ P+ ITYS ++ K GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
L++A ++F+ L+ S +E D Y MI + G V L L +PN I T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
I+ R G EEA +FR+ + G + + + +I R+ A E+ ++MRS G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 431 YFPDSHIIALVLN 443
+ D+ I++V+N
Sbjct: 601 FVGDASTISMVIN 613
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 230/495 (46%), Gaps = 4/495 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ +N +L + + +++L L + M+ I+ D Y+Y+ LI CF +
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + D+V S+L+ S+A+++ ++ P+ V +NT+I
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ EA LI+ M +G +PD +Y T++N + ALS+ +M +
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ +ID DA LF M GI P+VV+YN+L+R + +A L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M ++I NVVT++ +I + K + +A L EM R I+P+ TYS++I +
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+LD A +F+ + S + V Y T+I + + V L E+ Q NT+
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I L +AG + A +F++ G DI + +++ + K + VFE ++
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
+ PD + +++ K + E DL+ + +G + ++ M+S + +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 488 MLESLFERLDSDSNI 502
++LF + D +
Sbjct: 553 EADALFREMKEDGTL 567
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 224/461 (48%), Gaps = 8/461 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT--CFGKEG 68
+ R S +++YN+++ R Q LA + +M + G PD T S+L+ C GK
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR- 165
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
A++ + QM + V ++ LI + S+A+++ R+ + G PDL Y
Sbjct: 166 -ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
T++N K A L+++M + ++ D V Y+T+++ +AL++F EM+
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
++ T N +I DA RL M + I+P+VV+++ L+ + + EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
L+ M ++ I+ ++ TY+++I + ++A ++ + M ++ PN +TY+T+I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PN 364
+ KA +++ LF+++ G+ + V Y T+I + G A+++ ++ P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
I + L + G++E+A VF + DI + MIE + K + ++F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+ G P+ I +++ + + E AD L+ EM+E+G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 1/307 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + +P+V ++ ++ ++ + A L+DEM +R I PD +TYS+LI F D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A + M ++V Y+ LI+ K + + +F + G+V + V YNT+I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+A A+ + ++M GV PD ++YS LL+ + K +AL VF + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ T NIMI+ + +D LF S+ G+ P+V+ Y T++ + L EA L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
FR M+ N TYNT+I+ + + + L++EM++ G +A T S +I +
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-H 616
Query: 312 AGKLDRA 318
G+L+++
Sbjct: 617 DGRLEKS 623
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 181/404 (44%), Gaps = 7/404 (1%)
Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
KL D A+ +F + S +P +V +N +++ K F L E M+ + D
Sbjct: 60 KLDD---AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY 116
Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
SY+ L+N + + AL+V +M ++ D+ T + +++ Y +A L M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
M P+ V++NTL+ EA+ L M + + ++ TY T++ K +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
+ A +L+++M+ IE + + Y+TII ++ A LF ++ + G+ + V Y ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
I G + A RLL ++ + PN + I + G++ EA ++ +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
DI + +I F + + +FE M S FP+ ++ + K + E +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
L+ EM + G V + + ++ D +M + +F+++ SD
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + +++ ++++ P ++ YN+++ + +A + E LF + +G+ P+ Y+T+
Sbjct: 483 KALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ F ++G+ + A + ++M++D + Y+ LI + D + + + ++S G
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
V D + +IN+ +L K
Sbjct: 602 VGDASTISMVINMLHDGRLEK 622
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 234/446 (52%), Gaps = 5/446 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P F + ++ + + A L D+M QRG PD TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A+S L++ME+ ++ D+V+Y+ +I+ K A+++F+ + + GI
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
PD+ Y+++I+ + +A L+ +M E+ + P+ V++S L++ +V+ K VEA +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ EM + + D+ T + +I+ + D +A +F M P+VV+Y+TL++ + +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ E + LFR M ++ + N VTY T+I + ++ + + A + ++M + G+ PN +T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+ ++ K GKL +A ++F+ L+ S +E D Y MI + G V L L
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
PN I T I+ R G EEA + ++ + G + + + +I R+
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
E+ ++MRS G+ D+ I LV N
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 240/519 (46%), Gaps = 9/519 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ +N +L V + ++EL L ++M+ GI+ D YTYS I CF +
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + D+V S+L+ S A+++ ++ G PD + T+I
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ EA L+++M ++G +PD V+Y T++N + ALS+ +M +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ N +ID + DA LF M GI P V +Y++L+ + +A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M ++I NVVT++ +I + K + +A L EM R I+P+ TYS++I +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+LD A +F+ + S + V Y T+I + + V L E+ Q NT+
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I +A + A VF+Q G +I + +++ +N K A + VFE ++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
+ PD + +++ K + E +L+ + +G + + M+S + +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASR 526
+SL +++ D + ++ + RA RL D R
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLI----RA-RLRDGDR 589
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 215/444 (48%), Gaps = 11/444 (2%)
Query: 12 EARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E ++ + Y +LRN L + + A LF +M + P ++ L++ K F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+ IS +QM+ +S DL YS I + S S A+++ +++ G PD+V +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+N + +K +A L+++M E G KPDT +++TL++ ++K EA+++ +M + C
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
DL T +++ G +D+A L M K I+ VV YNT++ + + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALS---LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A++LF M K I +V TY+++I A+ L+ +M R I PN +T+S +I
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----P 363
+ K GKL A L+ ++ ++ D Y ++I + + AK + + P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 364 NTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
N + T I +A R+EE +FR+ G V + + +I F + + N VF
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 424 EKMRSAGYFPDSHIIALVLNSYGK 447
++M S G P+ ++L+ K
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCK 480
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 21 AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
Y ++ +A+ + A +F +M G+ P+ TY+ L+ K G A+ + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 81 EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
++ + D+ Y+ +IE K +F L G+ P+++AYNTMI+ F +
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
+EA L+++M+E G P++ +Y+TL+ + + + + EM D +T ++
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 201 IDVY--GQLD 208
++ G+LD
Sbjct: 615 TNMLHDGRLD 624
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + +++ + + P ++ YN+++ + +A + E LF + +G++P+ Y+T+
Sbjct: 486 KAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ F ++G + A S L++M++D + Y+ LI + D + + ++S G
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
D + N+ +L K
Sbjct: 605 AGDASTIGLVTNMLHDGRLDK 625
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 226/436 (51%), Gaps = 4/436 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E Y P F +N ++ + R + A L D M +G PD TY ++ K G D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+S L++MEQ ++ +V+Y+ +I+ + + A+++F+ + + GI P++V YN++I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ +A L+ +M E+ + P+ V++S L++ +V+ K VEA ++ EM + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ T + +I+ + D +A +F M P+VV+YNTL++ + +A+ E + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
FR M ++ + N VTY T+I + ++ E + A + ++M + G+ P+ +TYS ++
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
GK++ A ++F+ L+ S +E D Y MI + G V L L +PN +
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T ++ R G EEA +FR+ + G + D + +I R+ A E+ +MR
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 428 SAGYFPDSHIIALVLN 443
S + D+ I LV N
Sbjct: 599 SCRFVGDASTIGLVTN 614
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 223/462 (48%), Gaps = 13/462 (2%)
Query: 8 WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
W+ + +S + Y + N L + + A LF +M + P +S L++ K
Sbjct: 38 WVRD---FSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM 94
Query: 68 GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
FD IS +QM+ +S +L YS LI + S S A+++ +++ G PD+V
Sbjct: 95 NKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
N+++N F +A L+ +M E G +PD+ +++TL++ +++ EA+++ M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 188 VNCPLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
C DL T I+++ G +D+A L M + I+P VV YNT++ +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALS---LLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST 304
+A++LF M K I NVVTYN++I+ A+ L+ +M R I PN +T+S
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
+I + K GKL A L+ ++ ++ D Y ++I + + AK + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
PN + T I +A R++E +FR+ G V + + +I F + ++ N
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQ 462
VF++M S G PD +++L+ + ETA ++ +Q
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 222/493 (45%), Gaps = 39/493 (7%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ ++ +L + + +++L L ++M+ GI+ + YTYS LI CF +
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + D+V ++L+ + S A+S+ ++ G PD +NT+I
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ + EA L++ M +G +PD V+Y ++N + ALS+ +M +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ N +ID DA LF M GI P+VV+YN+L+R + +A L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP-------------- 297
M ++I NVVT++ +I + K + +A L EM R I+P
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 298 ---------------------NAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
N +TY+T+I + KA ++D LF+++ G+ + V
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI----LARAGRIEEATWVFRQAF 392
Y T+I + + +A+ + ++ +P +I L G++E A VF
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFE 452
+ DI + MIE + K + ++F + G P+ +++ + + E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 453 TADDLYSEMQEEG 465
AD L+ EM+EEG
Sbjct: 554 EADALFREMKEEG 566
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 3/377 (0%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ + P V YN ++ + K A LF EM +GI P+ TY++LI C G +
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A L M + +++ ++V +S LI+ K +A ++ + I PD+ Y+++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
IN F EA+ + E M + P+ V+Y+TL+ + + + E + +F EM++
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
+ T +I + Q +A +F M G+ P +++Y+ LL A+
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
+F +QR ++E ++ TYN MI+ K+ + E +L + +G++PN +TY+T+++ +
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
+ G + A LF++++ G D Y T+I A+ R G A + L+ E+R + +
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607
Query: 371 AI---TILARAGRIEEA 384
I T + GR++++
Sbjct: 608 TIGLVTNMLHDGRLDKS 624
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 186/404 (46%), Gaps = 7/404 (1%)
Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
KL D A+++F + S P +V ++ +++ K F L E+M+ G+ +
Sbjct: 61 KLDD---AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
+YS L+N + + AL+V A+M ++ D+ T N +++ + + DA L M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
+MG P ++NTL+ EA+ L M K + ++VTY ++ K +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
+ A +L+++M+ IEP + Y+TII ++ A LF ++ + G+ + V Y ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 341 IVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
I G + A RLL ++ + PN + I + G++ EA ++ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
DI + +I F + + +FE M S FP+ ++ + K + + +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
L+ EM + G V + + ++ + ++ + + +F+++ SD
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 249/519 (47%), Gaps = 11/519 (2%)
Query: 33 KQWELAHGLFDE-MRQRGIAP--DRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
K+++LA FD M+Q+ D + +I+ GKEG SA + +++D S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 90 VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK-AKLFKEARLLIE 148
Y++LI Y +A+++F +++ G P L+ YN ++NVFGK + + L+E
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
+M+ G+ PD +Y+TL+ EA VF EM D T N ++DVYG+
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
K+A ++ M G PS+V+YN+L+ Y + EA+ L M K + +V TY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
T++ + ++ + E A ++ +EM+N G +PN T++ I ++G GK +F ++
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP-RETAITIL---ARAGRIEEA 384
G+ D V + T++ + + G+ + + E+++ +P RET T++ +R G E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
V+R+ DAG D+S + ++ +R + +V +M P+ +L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD-FNMLESLFERLDSDSNIN 503
Y +E L E+ G + V + L L ++ D E F L
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 504 KKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSLV 542
+ + IY R + A+ +++ M K R F S+
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYM-KERGFTPSMA 665
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 233/461 (50%), Gaps = 7/461 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVL--RAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
EE P++ YNV+L NV W L ++M+ GIAPD YTY+TLITC +
Sbjct: 235 EEDGCKPTLITYNVIL-NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
+ A ++M+ S D V Y+ L+++ K +A+ + + + +G P +V YN
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
++I+ + + + EA L +M E+G KPD +Y+TLL+ + K A+S+F EM
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
C ++ T N I +YG + ++F + G+ P +V++NTLL V+G+ + E
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
+F+ M+R T+NT+I Y + E+A + + M + G+ P+ TY+T++A
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAY---ERVGLV-AHAKRLLHELRQPN 364
+ G +++ + ++ + + + Y +++ AY + +GL+ + A+ + + +P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
+ +T + + ++ + EA F + + G DI+ M+ ++ R + A V +
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
M+ G+ P ++ + + +F ++++ E+ +G
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 260/526 (49%), Gaps = 5/526 (0%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGM- 69
+E +S V++Y ++ + ++ A +F +M + G P TY+ ++ FGK G
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 70 FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
++ S +++M+ D ++ D Y+ LI ++ S + +A +F +K++G D V YN
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
+++V+GK+ KEA ++ EM G P V+Y++L++ Y + EA+ + +M E
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
D+ T ++ + + + A +F MR G P++ ++N +++YG F E +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
+F + + ++VT+NT++ ++G++ + + + +EM+ G P T++T+I+ +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
+ G ++A +++++ +GV D Y T++ A R G+ ++++L E+ P E
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 370 -TAITILARAGRIEEATWVFRQAFD--AGEVKDISV-FGCMIELFSRNKKYANVIEVFEK 425
T ++L +E + A + +G ++ +V ++ + S+ F +
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
++ G+ PD + +++ YG+ + A+ + M+E G S + ++ ++ D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 486 FNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
F E + + + ++ V Y R R+ DASRI + M
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 17/442 (3%)
Query: 32 AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR---VSGD 88
K W HGL + +Q +LI G DS +S L + +D+ S +
Sbjct: 87 GKPWSY-HGLSPQGQQ--------VLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSE 137
Query: 89 LVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIE 148
L+ + + +K +A F + K + D +I++ GK A +
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFN 197
Query: 149 EMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLD 208
++E G D SY++L++ + + ++ EA++VF +M E C L T N++++V+G++
Sbjct: 198 GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
Query: 209 MA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
L M+ GI P +YNTL+ L EA +F M+ + VTY
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRS 327
N ++ +YGKS ++A ++ EM G P+ +TY+++I+ + + G LD A L ++
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 328 SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEE 383
G + D Y T++ +ER G V A + E+R +PN I + G+ E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
+F + G DI + ++ +F +N + V VF++M+ AG+ P+ +++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 444 SYGKLREFETADDLYSEMQEEG 465
+Y + FE A +Y M + G
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAG 519
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 188/386 (48%), Gaps = 37/386 (9%)
Query: 13 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
A P++ +N ++ ++ +FDE+ G++PD T++TL+ FG+ GM DS
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM-DS 471
Query: 73 AISWL-QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
+S + ++M++ + ++ LI + + +A++++ R+ +G+ PDL YNT++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK----------------- 174
+ +++++ ++ EM + KP+ ++Y +LL+ Y +
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 175 ------------------FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
EA F+E+ E D+TT N M+ +YG+ M A+ +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
M++ G PS+ +YN+L+ ++ + FG++ + R + K I+ ++++YNT+I Y +
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
+ A+ + EM+N GI P+ ITY+T I + + A + + + G +
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQ 362
Y +++ Y ++ AK + +LR
Sbjct: 772 YNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 14/294 (4%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCF--GKEGM 69
+A +P + YN VL + R WE + + EM P+ TY +L+ + GKE
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-- 574
Query: 70 FDSAISWLQQMEQDRVSGDL----VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
I + + ++ SG + VL L+ + K +A FS LK G PD+
Sbjct: 575 ----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
N+M++++G+ ++ +A +++ M+E+G P +Y++L+ ++ + F ++ + E+
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
D+ + N +I Y + +DA R+F MR GI P V++YNT + Y +F
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
EAI + R M + N TYN+++ Y K ++A +++++N ++P+A
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN--LDPHA 802
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 235/443 (53%), Gaps = 2/443 (0%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P F + ++ + + A L D+M QRG PD TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A++ L +ME R+ ++V+++ +I+ K A+ +F+ +++ GI
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P++V YN++IN + +A L+ M E+ + P+ V+++ L++ + + K VEA +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
EM + + D T N++I+ + + +A ++F M P++ +YNTL+ + +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
+ + + LFR M ++ + N VTY T+I+ + ++ + + A + ++M + + + +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
YS ++ GKLD A ++F+ L+ S +E++ +Y TMI + G V A L L
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
+P+ + T I+ L ++EA +FR+ + G + + + +I R+ A
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 421 EVFEKMRSAGYFPDSHIIALVLN 443
E+ ++MRS+G+ D+ I+LV N
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTN 613
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 224/463 (48%), Gaps = 17/463 (3%)
Query: 12 EARYSPSVFAYNVVLRNVLR-AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E ++ + Y +LRN L + + A LF +M + P ++ L++ K F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+ IS +QM+ +S DL YS I + S S A+++ +++ G PD+V +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+N + +K +A L+++M E G KPDT +++TL++ ++K EA+++ +M + C
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
DL T +++ G +D+A + L M I +VV +NT++ +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALN---LLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A+ LF M+ K I NVVTYN++I A+ L+ M + I PN +T++ +I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
+ K GKL A L +++ ++ D + Y +I + + AK++ + + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 368 R----ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
T I + R+E+ +FR+ G V + + +I+ F + + VF
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 424 EKMRSAGYFPDSHIIALVLN---SYGKLREFETADDLYSEMQE 463
++M S D +++L+ SYGKL +TA ++ +Q+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKL---DTALVIFKYLQK 496
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 187/448 (41%), Gaps = 48/448 (10%)
Query: 98 LARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG 154
L +LSD K A+ +F + S P +V +N +++ K F+ L E+M+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
+ D +YS +N + + AL+V A+M
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKM----------------------------- 144
Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
K+G +P +V+ ++LL Y ++ +A+ L M + + T+ T+I +
Sbjct: 145 ------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI--H 196
Query: 275 GKSLEHEKATN---LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
G L H KA+ L+ +M RG +P+ +TY T++ K G +D A L K+ ++ ++
Sbjct: 197 GLFL-HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 332 IDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWV 387
+ V++ T+I + + V A L E+ +PN + + I L GR +A+ +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
+ ++ F +I+ F + K ++ E+M PD+ L++N +
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 448 LREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
+ A ++ M + C+ + Q + +++ + K LF + +
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 508 HHVVAGIYERANRLNDASRIMNRMNKRR 535
+ + + +A + A + +M R
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P++ YN ++ + K+ E LF EM QRG+ + TY+T+I F + G DSA
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS------------------ 118
+QM +RV D++ YS L+ A+ IF L+ S
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 119 --------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYST 164
I PD+V YNTMI+ +L +EA L +M+E G P++ +Y+T
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 165 LLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY--GQLD 208
L+ + + + + EM D +T +++ ++ G+LD
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLD 621
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
++F YN ++ + +A + A LF + I PD TY+T+I+ + + A
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
++M++D + Y+ LI + D + + + ++SSG V D + + N+
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Query: 138 KLFK 141
+L K
Sbjct: 619 RLDK 622
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 266/539 (49%), Gaps = 8/539 (1%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
RS+ + ++ + P+ Y +++ + R + +FDEM +G++ ++Y+ L
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE-LARKLSDYSKAISIFSRLKSSG 119
I +G+ G +++++ L +M+ +++S ++ Y+ +I AR D+ + +F+ ++ G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 120 IVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
I PD+V YNT+++ L EA ++ M + G+ PD +YS L+ + + + +
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
+ EM D+T+ N++++ Y + K+A +F M+ G P+ +Y+ LL ++
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
G++ + + LF M+ + + TYN +I+++G+ ++ L +M IEP+
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
TY II GK G + A + Q + ++ + Y +I A+ + L A +
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 360 LRQPNTIPR-ETAITIL---ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 415
+ + + P ET ++L AR G ++E+ + + D+G ++ F IE + + K
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
+ ++ + M + PD + VL+ Y R + + + EM+ + S +
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 476 MLSLYGARKDFNMLESLFERLDSD--SNINKKELHHVVAGIYERANRLNDASRIMNRMN 532
ML++YG + ++ + L E + S+ SNI++ + ++ G Y+ + +++++N
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQV-IGQMIKGDYDDDSNWQIVEYVLDKLN 660
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 243/538 (45%), Gaps = 34/538 (6%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTL 60
S+ +LD + E + SPS+ YN V+ R WE GLF EMR GI PD TY+TL
Sbjct: 195 SLELLDRMKNE-KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 253
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
++ G+ D A + M + DL YS+L+E KL K + + S G
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
+PD+ +YN ++ + K+ KEA + +M+ G P+ +YS LLNL+ ++ ++ +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
+F EM N D T NI+I+V+G+ K+ LF M + I+P + +Y ++ G
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
+ L +A + + M +I + Y +I+ +G++ +E+A M G P+
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
T+ +++ + + G + + + +L SG+ + + I AY++ G A + ++
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
+ P E R EA ++ ++S +
Sbjct: 554 EKSRCDPDE----------RTLEA---------------------VLSVYSFARLVDECR 582
Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML-SL 479
E FE+M+++ P ++L YGK ++ ++L EM QV QM+
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGD 642
Query: 480 YGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTF 537
Y ++ ++E + ++L+S+ ++ + + A+R++N KR F
Sbjct: 643 YDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 229/444 (51%), Gaps = 5/444 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P + ++ + + + A L + M +G PD TY +I
Sbjct: 154 AVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A++ L +ME+ ++ D+V+YS +I+ K A+++F+ + + GI
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
PD+ Y+++I+ + +A L+ +M E+ + P+ V++++L++ + + K +EA +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
F EM + + ++ T N +I+ + D +A ++F M P VV+YNTL+ + +
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ + + LFR M R+ + N VTY T+I + ++ + + A + ++M + G+ PN +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+T++ K GKL++A ++F+ L+ S +E D Y M + G V L L
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+P+ I T I+ + G EEA +F + + G + D + +I R+ A
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 418 NVIEVFEKMRSAGYFPDSHIIALV 441
E+ ++MRS + D+ LV
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 238/485 (49%), Gaps = 9/485 (1%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y PS+ N +L + A L D+M + G PD T++TL+ + A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ +++M DLV Y +I K + A+++ ++++ I D+V Y+T+I+
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K + +A L EM +G++PD +YS+L++ ++ +A + ++M E ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T N +ID + + +A++LF M + IDP++V+YN+L+ + + EA +F L
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M K+ +VVTYNT+I + K+ + L ++M RG+ N +TY+T+I + +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
D A M+F+++ S GV + + Y T++ + G + A + L++ P I
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 375 LA----RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
++ +AG++E+ +F G D+ + MI F + +F KM+ G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS-DQVHFQMLS--LYGARKDFN 487
PDS ++ ++ + + + +L EM+ C F+ D + +++ L+ R D
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS--CRFAGDASTYGLVTDMLHDGRLDKG 608
Query: 488 MLESL 492
LE L
Sbjct: 609 FLEVL 613
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 215/478 (44%), Gaps = 39/478 (8%)
Query: 27 RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
RN L + + A LF EM + P +S L++ K FD IS+ ++ME VS
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 87 GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
+L Y+ +I + S S A++I ++ G P +V N+++N F EA L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY-- 204
+++M E G +PDTV+++TL++ +++K EA+++ M C DL T +I+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 205 -GQLDMA--------------------------------KDADRLFWSMRKMGIDPSVVS 231
G+ D+A DA LF M GI P V +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 232 YNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQ 291
Y++L+ + +A L M ++I NVVT+N++I + K + +A L EM
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 292 NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVA 351
R I+PN +TY+++I + +LD A +F + S D V Y T+I + + V
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 352 HAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
L ++ + NT+ T I +A + A VF+Q G +I + ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 408 ELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+ +N K + VFE ++ + PD + ++ K + E DL+ + +G
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 184/435 (42%), Gaps = 39/435 (8%)
Query: 70 FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
D A+ +M + R +V +S L+ K+ + IS +++ G+ +L YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
MIN + A ++ +M + G P V+ ++LLN + ++ EA+++ +M E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-- 163
Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
MG P V++ TL+ + EA+
Sbjct: 164 ---------------------------------MGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
L M K + ++VTY +I K E + A NL+ +M+ IE + + YST+I
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
K +D A LF ++ + G+ D Y ++I G + A RLL ++ + PN
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
+ + I A+ G++ EA +F + +I + +I F + + ++F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
M S PD ++N + K ++ +L+ +M G V + + ++ + D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 486 FNMLESLFERLDSDS 500
+ + +F+++ SD
Sbjct: 431 CDNAQMVFKQMVSDG 445
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + +++ ++++ P ++ YN++ + +A + E LF + +G+ PD Y+T+
Sbjct: 468 KAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ F K+G+ + A + +M++D D Y+ LI + D + + + ++S
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
D Y + ++ +L K
Sbjct: 587 AGDASTYGLVTDMLHDGRLDK 607
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 229/446 (51%), Gaps = 5/446 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + Y P+ +N ++ + + A L D M +G PD TY ++
Sbjct: 170 AVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A + L +MEQ ++ +++Y+ +I+ K A+++F +++ GI
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P++V Y+++I+ + +A L+ +M E+ + PD ++S L++ +V+ K VEA +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ EM + + + T + +I+ + D +A ++F M P VV+YNTL++ + +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
+ E + +FR M ++ + N VTYN +I+ ++ + + A + +EM + G+ PN +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+T++ K GKL++A ++F+ L+ S +E Y MI + G V L L
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+P+ + T I+ R G EEA +F++ + G + + + +I R+
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
E+ ++MRS G+ D+ I LV N
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 221/455 (48%), Gaps = 4/455 (0%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P++ + +L +K+ A L D+M G P+ T++TLI A+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ + +M DLV Y ++ K D A ++ ++++ + P ++ YNT+I+
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K K +A L +EM +G++P+ V+YS+L++ ++ +A + ++M E D+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T + +ID + + +A++L+ M K IDPS+V+Y++L+ + + EA +F
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M K +VVTYNT+IK + K E+ + +EM RG+ N +TY+ +I +AG
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
D A +F+++ S GV + + Y T++ + G + A + L+ +P
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
I + +AG++E+ +F G D+ + MI F R +F++M+ G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
P+S ++ + + + E + +L EM+ G
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 58/546 (10%)
Query: 27 RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
RN L + + A LF EM + P +S L++ K FD IS +QM+ +
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 87 GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
+ YS LI + S A+++ ++ G P++V ++++N + +K EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
+++M G +P+TV+++TL++ ++K EA+++ M C DL T ++++
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN---G 230
Query: 207 LDMAKDADRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
L D D F + KM ++P V+ YNT++ + + +A++LF+ M+ K I N
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 264 VVTYNTMIKIY--------------------------------------GKSLEHEKATN 285
VVTY+++I GK +E EK
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK--- 347
Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
L EM R I+P+ +TYS++I + +LD A +F+ + S D V Y T+I +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 346 RVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
+ V + E+ Q NT+ I L +AG + A +F++ G +I
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
+ +++ +N K + VFE ++ + P + +++ K + E DL+ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 462 QEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANR 520
+G V D V + M+S + + ++LF+ + D + ++ + RA R
Sbjct: 528 SLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI----RA-R 581
Query: 521 LNDASR 526
L D R
Sbjct: 582 LRDGDR 587
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + +P VF ++ ++ ++ + A L+DEM +R I P TYS+LI F D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A + M D+V Y+ LI+ K + + +F + G+V + V YN +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+A A+ + +EM GV P+ ++Y+TLL+ +N K +A+ VF +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ T NIMI+ + +D LF ++ G+ P VV+YNT++ + EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F+ M+ N YNT+I+ + + E + L++EM++ G +A T + +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-H 617
Query: 312 AGKLDRA 318
G+LD++
Sbjct: 618 DGRLDKS 624
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + +++ + ++ P+++ YN+++ + +A + E LF + +G+ PD Y+T+
Sbjct: 484 KAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ F ++G + A + ++M++D + Y+ LI + D + + ++S G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
D + N+ +L K
Sbjct: 603 AGDASTIGLVTNMLHDGRLDK 623
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 43/523 (8%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P Y+ ++ RA QW A L D+M + IAP R TY+ LI G G + A+
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
++M + V DLV ++ ++ + YSKA+S F +K + + PD +N +I K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 137 AKLFKEARLLIEEMRE-------------------------------------QGVKPDT 159
+A L MRE +G+KP+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
VSY+ L+ Y + ALSV ++ + D+ + +++ YG+ A +F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
MRK P+VV+YN L+ YG EA+ +FR M++ I+ NVV+ T++ +S +
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
++ Q+RGI N Y++ I + A +L++A L+Q +R V+ D V +
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIP--RETAITIL---ARAGRIEEATWVFRQAFDA 394
+I R+ A L E+ + +IP +E ++L ++ G++ EA +F Q A
Sbjct: 536 LISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
G D+ + M+ ++ ++K+ E+F +M + G PDS + ++ ++ K +
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLD 497
L M+E+ F+ V F++ S +++ L + +D
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 229/501 (45%), Gaps = 16/501 (3%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+ A P V + ++ + E +F+ M G+ P+ +Y+ L+ + GM
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+A+S L ++Q+ + D+V Y+ L+ + KA +F ++ P++V YN +
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I+ +G EA + +M + G+KP+ VS TLL + K V +V +
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
L+ N I Y + A L+ SMRK + V++ L+ + EAI
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
+ M+ I Y++++ Y K + +A ++ +M+ G EP+ I Y++++ +
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
+ K +A LF ++ ++G+E D + ++ A+ + G ++ L+ +R+ IP
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE-KEIPFTG 670
Query: 371 AI--TILARAGRIEEATWVFRQAFDAGEVKD-------ISVFGCMIELFSRNKKYANVIE 421
A+ I + ++E +++A D ++ D I + M+ LF ++ K +++
Sbjct: 671 AVFFEIFSACNTLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726
Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
+F K+ ++G + A++L + + ++ M G S+Q++ ++S +G
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-FG 785
Query: 482 ARKDFNMLESLF-ERLDSDSN 501
R E L ++L+S N
Sbjct: 786 ERSAGIEFEPLIRQKLESLRN 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 126/297 (42%), Gaps = 31/297 (10%)
Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
N+MI ++ + + A LF+ M+K P +Y+ L+ +G A + A++L M R
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
I + TYN +I G S +A + ++M + G+ P+ +T++ +++ + + +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
A F+ ++ + V D + +I ++G + A L + +R+ R
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR--------- 317
Query: 378 AGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHI 437
D+ F ++ L+S + N VFE M + G P+
Sbjct: 318 --------------------PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 438 IALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ-MLSLYGARKDFNMLESLF 493
++ +Y TA + ++++ G + D V + +L+ YG + + +F
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 227/446 (50%), Gaps = 5/446 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P + ++ + + A L D M QRG P+ TY ++
Sbjct: 174 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A++ L +ME ++ D+V+++ +I+ K A+++F +++ GI
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P++V Y+++I+ + +A L+ +M E+ + P+ V+++ L++ +V+ KFVEA +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ +M + + D+ T N +++ + D A ++F M P VV+YNTL++ + +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
++ + LFR M + + + VTY T+I+ + + A + ++M + G+ P+ +T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
YS ++ GKL++A +F ++ S +++D +Y TMI + G V L L
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+PN + T I+ L ++EA + ++ + G + + + +I R+ A
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
E+ +MRS + D+ I LV N
Sbjct: 593 ASAELIREMRSCRFVGDASTIGLVAN 618
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 213/458 (46%), Gaps = 4/458 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ +N +L + + K++++ L ++M++ I YTY+ LI CF +
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + +V S+L+ S A+++ ++ G PD + + T+I
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ EA L++ M ++G +P+ V+Y ++N + AL++ +M
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ N +ID + DA LF M GI P+VV+Y++L+ + +A L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M K+I N+VT+N +I + K + +A L +M R I+P+ TY++++ +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+LD+A +F+ + S D V Y T+I + + V L E+ +T+
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I L G + A VF+Q G DI + +++ N K +EVF+ M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+ D +I ++ K + + DL+ + +G
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 221/456 (48%), Gaps = 10/456 (2%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+S Y +LRN L + + A GLF M + P ++ L++ K FD I
Sbjct: 46 FSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 105
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
S ++M++ + L Y+ LI + S S A+++ ++ G P +V ++++N +
Sbjct: 106 SLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K +A L+++M E G +PDT++++TL++ ++K EA+++ M + C +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 195 TTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
T ++++ G D+A + L M I+ VV +NT++ + +A++L
Sbjct: 226 VTYGVVVNGLCKRGDTDLALN---LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F+ M+ K I NVVTY+++I A+ L+ +M + I PN +T++ +I + K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
GK A L+ + ++ D Y +++ + + AK++ + P+ +
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I ++ R+E+ T +FR+ G V D + +I+ + N +VF++M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
S G PD +++L+ + E A +++ MQ+
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P V YN +++ ++K+ E LF EM RG+ D TY+TLI +G D+A
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS------------------ 118
+QM D V D++ YS L++ KA+ +F ++ S
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 119 -----------------GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVS 161
G+ P++V YNTMI+ +L +EA L+++M+E G P++ +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY--GQLD 208
Y+TL+ ++ + + + EM D +T ++ ++ G+LD
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLD 626
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/141 (17%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + D++ +++ ++ Y ++ + +A + + LF + +G+ P+ TY+T+
Sbjct: 488 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ + + A + L++M++D + Y+ LI + D + + + ++S
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
V D + N+ +L K
Sbjct: 607 VGDASTIGLVANMLHDGRLDK 627
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 213/402 (52%), Gaps = 5/402 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P + ++ + + A L D M QRG P+ TY ++
Sbjct: 174 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A + L +ME ++ ++V+YS +I+ K A+++F+ +++ G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P+++ Y+++I+ + + +A L+ +M E+ + P+ V+++ L++ +V+ K VEA +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ EM + + D+ T + +I+ + D +A +F M P+VV+YNTL+ + +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ E + LFR M ++ + N VTY T+I + ++ + + A + ++M + G+ PN +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+T++ K GKL++A ++F+ L+ S +E Y MI + G V L L
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
+P+ I T I+ R G EEA +FR+ + G + D
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 213/425 (50%), Gaps = 4/425 (0%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y PS+ + +L K+ A L D+M + G PD T++TLI A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ + +M Q +LV Y ++ K D A ++ ++++++ I ++V Y+T+I+
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K + +A L EM +GV+P+ ++YS+L++ ++ +A + ++M E ++
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T N +ID + + +A++L+ M K IDP + +Y++L+ + + EA H+F L
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M K+ NVVTYNT+I + K+ ++ L +EM RG+ N +TY+T+I + +A
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
D A M+F+++ S GV + + Y T++ + G + A + L+ +P
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
I + +AG++E+ +F G D+ ++ MI F R +F KMR G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 431 YFPDS 435
PDS
Sbjct: 571 PLPDS 575
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 240/525 (45%), Gaps = 39/525 (7%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+S Y +LRN L + + + A GLF M + P + ++ L++ K FD I
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
S ++M++ +S +L Y+ LI + S S A+++ ++ G P +V ++++N +
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K +A L+++M E G +PDT++++TL++ ++K EA+++ M + C +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 195 TTCNIMIDVY---GQLDMA--------------------------------KDADRLFWS 219
T ++++ G +D+A DA LF
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
M G+ P+V++Y++L+ E + +A L M ++I NVVT+N +I + K +
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
+A L EM R I+P+ TYS++I + +LD A +F+ + S + V Y T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
+I + + + L E+ Q NT+ T I +A + A VF+Q G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
+I + +++ +N K + VFE ++ + P + +++ K + E
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS 500
DL+ + +G ++ M+S + + ++LF ++ D
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 224/446 (50%), Gaps = 5/446 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P + ++ + + A L D M QRG P+ TY ++
Sbjct: 99 AVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A + L +ME ++ D+V+++ +I+ K A+++F +++ GI
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P++V Y+++I+ + +A L+ +M E+ + P+ V+++ L++ +V+ KFVEA +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+M + + D+ T N +I+ + D A ++F M P + +YNTL++ + +
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
++ + LFR M + + + VTY T+I+ + + A + ++M + G+ P+ +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
YS ++ GKL++A +F ++ S +++D +Y TMI + G V L L
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+PN + T I+ L ++EA + ++ + G + D + +I R+ A
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
E+ +MRS + D+ I LV N
Sbjct: 518 ASAELIREMRSCRFVGDASTIGLVAN 543
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 4/458 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+F +N +L + + K+++L L ++M++ GI+ + YTY+ LI CF +
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + +V S+L+ S A+++ ++ G PD + + T+I
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ EA L++ M ++G +P+ V+Y ++N + A ++ +M
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ N +ID + DA LF M GI P+VV+Y++L+ + +A L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M K+I N+VT+N +I + K + +A L +M R I+P+ TY+++I +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+LD+A +F+ + S D Y T+I + + V L E+ +T+
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I L G + A VF+Q G DI + +++ N K +EVF+ M+
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+ D +I ++ K + + DL+ + +G
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 21 AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
Y +++ + + A +F +M G+ PD TYS L+ G + A+ M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 81 EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
++ + D+ +Y+ +IE K +F L G+ P++V YNTMI+ +L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
+EA L+++M+E G PD+ +Y+TL+ ++ + + + EM D +T ++
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 201 IDVY--GQLD 208
++ G+LD
Sbjct: 542 ANMLHDGRLD 551
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ + D++ +++ ++ Y ++ + +A + + LF + +G+ P+ TY+T+
Sbjct: 413 KALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I+ + + A + L++M++D D Y+ LI + D + + + ++S
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531
Query: 121 VPDLVAYNTMINVFGKAKLFK 141
V D + N+ +L K
Sbjct: 532 VGDASTIGLVANMLHDGRLDK 552
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 3/378 (0%)
Query: 11 EEARYS---PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
EE R S P AYN +L+ ++ + A + EM +RG++PD +TYS LI +
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 68 GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
G ++SA L++ME V + ++S L+ R ++ K + +KS G+ PD Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
N +I+ FGK A + M +G++PD V+++TL++ + ++ + + A +F M
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
C TT NIMI+ YG + D RL M+ GI P+VV++ TL+ VYG++ F +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
AI M+ ++ + YN +I Y + E+A N + M + G++P+ + +++I
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
+G+ + A + Q ++ +GV+ D V Y T++ A RV + E+ P
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Query: 368 RETAITILARAGRIEEAT 385
A ++L A R + T
Sbjct: 688 DRKARSMLRSALRYMKQT 705
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 210/488 (43%), Gaps = 41/488 (8%)
Query: 20 FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--ISWL 77
YN ++ R E A L +MRQ G D YS +I + DS +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
+++E+D++ D+ L +++I K D SKA+ + +++G+ ++I+ +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
EA L EE+R+ G+KP T +Y+ LL YV+ +A S+ +EM + D T
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 198 NIMIDVY---GQLDMAKDA------------------------DRLFWS--------MRK 222
+++ID Y G+ + A+ DR W M+
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 223 MGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
+G+ P YN ++ +G+ A+ F M + IE + VT+NT+I + K H
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 283 ATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIV 342
A + + M+ RG P A TY+ +I +G + D L K++S G+ + V + T++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 343 AYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGEVK 398
Y + G A L E++ P T I A+ G E+A FR G
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 399 DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLY 458
+ +I F +++ A V + M+ G PD ++ + ++ +F+ +Y
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 459 SEMQEEGC 466
EM GC
Sbjct: 678 EEMIMSGC 685
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 199/457 (43%), Gaps = 48/457 (10%)
Query: 68 GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
G+ + +SWLQ+ + +LYS LI L K F + + P + Y
Sbjct: 148 GLAYAVVSWLQK--HNLCFSYELLYSILIH---ALGRSEKLYEAFLLSQKQTLTP--LTY 200
Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF--VEALSVFAEM 185
N +I + ++A LI +MR+ G + D V+YS ++ ++K V L ++ E+
Sbjct: 201 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 260
Query: 186 NEVNCPLDLTTCNIMIDVYGQ----------LDMAK------------------------ 211
LD+ N +I + + L MA+
Sbjct: 261 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 320
Query: 212 -DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
+A+ LF +R+ GI P +YN LL+ Y + +A + M+++ + + TY+ +
Sbjct: 321 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 380
Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
I Y + E A +++EM+ ++PN+ +S ++A + G+ + + ++++S GV
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Query: 331 EIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATW 386
+ D Y +I + + + HA R+L E +P+ + T I + GR A
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500
Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
+F G + + + MI + +++ ++ + KM+S G P+ +++ YG
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 447 KLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGAR 483
K F A + EM+ G S ++ +++ Y R
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 191/445 (42%), Gaps = 79/445 (17%)
Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
Y+ +I+ G+++ EA LL ++ Q + P ++Y+ L+ N+ +AL++ A+M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQK---QTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
+ D +++I R ID SV+ LLR+Y E E
Sbjct: 225 QDGYQSDFVNYSLVIQSL---------------TRSNKID-SVM----LLRLYKEIE--- 261
Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
R ++E +V N +I + KS + KA L+ Q G+ T +II
Sbjct: 262 ----------RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311
Query: 307 AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
+ +G+ A LF++LR SG++ Y ++ Y + G + A+ ++ E+ +
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 367 PRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDIS-VFGCMIELFSRNKKYANVIE 421
P E ++L AGR E A V ++ +AG+V+ S VF ++ F ++ +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKE-MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFE----------------------------- 452
V ++M+S G PD +V++++GK +
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 453 ------TADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKE 506
A++++ M+ GC+ + M++ YG ++ ++ ++ L ++ S +
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 507 LHHVVAGIYERANRLNDASRIMNRM 531
H + +Y ++ R NDA + M
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEM 575
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/598 (24%), Positives = 270/598 (45%), Gaps = 70/598 (11%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
R+V I +W + Y +V YN++LR + +A +W L+DEM ++GI P TY TL
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 228
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS--- 117
I + K G+ A+ WL +M + + D V ++++ +K ++ KA F +
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288
Query: 118 ---SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHK 174
S + YNTMI+ +GK+ KEA + M E+G+ P TV+++T++++Y N +
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 175 FVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNT 234
E S+ M +++C D T NI+I ++ + + + A F M+ G+ P VSY T
Sbjct: 349 LGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 235 LL-----------------------------------RVYGEAELFGEAIHLFRLMQRKE 259
LL R+Y EAE+ ++ F+ R
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK---RFH 464
Query: 260 IEQNVVT--YNTMIKIYGKS---LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
+ N+ + Y+ I YG+ E E+ QE+ R + I Y+ +I +G +
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKS 520
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
++A LF+ + S GV D Y T++ + + L ++R+ + IP
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCA 580
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
I+ + G++ A V+++ + D+ V+G +I F+ + E M+ AG
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC-------VFSDQVHFQMLSLYGAR 483
+S I ++ Y K+ + A+ +Y ++ + C V++ M++LY R
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNC---MINLYSER 696
Query: 484 KDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
E++F+ + N+ ++ +Y++ R +A++I +M + + L
Sbjct: 697 SMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEEATQIAKQMREMKILTDPL 753
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 77/492 (15%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
S + YN ++ ++ Q + A F M + GI P T++T+I +G G S +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
+ M+ + D Y+ LI L K +D +A + F +K G+ PD V+Y T++ F
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF---------------------- 175
+ +EA LI EM + V+ D + S L +YVE
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 176 ------------VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 223
EA VF EVN + N+MI YG + A LF SM
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 224 GIDPSVVSYNTLLRVYGEAEL--------------------------------FGE---A 248
G+ P +YNTL+++ A++ G+ A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
+++ M IE +VV Y +I + + ++A + ++ M+ GI N++ Y+++I +
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654
Query: 309 WGKAGKLDRAAMLFQKLRSSGVEID-PVLYQT--MIVAYERVGLVAHAKRLLHELRQ--- 362
+ K G LD A +++KL S + P +Y + MI Y +V A+ + ++Q
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE 714
Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
N + + + GR EEAT + +Q + + D + ++ LF+ + ++ +E
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 423 FEKMRSAGYFPD 434
F++M S+G PD
Sbjct: 775 FKEMVSSGIQPD 786
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
+V YNV+++ +K E A LF+ M G+ PD+ TY+TL+ M +L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
++M + D + Y +I KL + A ++ + I PD+V Y +IN F
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM----NEVNCPLD 193
++A +E M+E G+ ++V Y++L+ LY + EA +++ ++ N+ P D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-D 682
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
+ T N MI++Y + M + A+ +F SM++ G + + ++ +L +Y + F EA + +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
M+ +I + ++YN+++ ++ ++A +EM + GI+P+ T+ ++ I K G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 314 KLDRAAMLFQKLR 326
+A +++R
Sbjct: 802 MSKKAVRKIEEIR 814
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 130/256 (50%), Gaps = 4/256 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E Y Y V+ + ++ Q +A ++ EM + I PD Y LI F G
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSG---IVPDLVAYN 128
A+S+++ M++ + G+ V+Y++LI+L K+ +A +I+ +L S PD+ N
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
MIN++ + + ++A + + M+++G + + +++ +L +Y +N +F EA + +M E+
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
D + N ++ ++ K+A F M GI P ++ +L + + + +A
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Query: 249 IHLFRLMQRKEIEQNV 264
+ +++KEI++ +
Sbjct: 807 VRKIEEIRKKEIKRGL 822
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 20 FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
+YN VL +++ A F EM GI PD T+ +L T K GM A+ +++
Sbjct: 753 LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Query: 80 MEQDRVSGDLVLY 92
+ + + L L+
Sbjct: 813 IRKKEIKRGLELW 825
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 212/475 (44%), Gaps = 44/475 (9%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P AY ++ R K + L EM++R I YTY T++ G D A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+++M ++V+Y+ LI+ + S + A+ + +K GI PD+ YN++I K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
AK EAR + EM E G+KP+ +Y ++ Y+E +F A EM E +
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 197 CNIMIDVY-------------------GQLDMAK----------------DADRLFWSMR 221
C +I+ Y G L AK DA+ +F MR
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
GI P V SY L+ + + +A +F M + + NV+ YN ++ + +S E E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
KA L+ EM +G+ PNA+TY TII + K+G L A LF +++ G+ D +Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 342 VAYERVGLVAHAKRLLHELRQ---PNTIPRETAITILARAGRIEEATWVFRQAFDA---- 394
R+ V A + ++ +T P I + + G+ E T V + D
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 395 -GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
G+ D++ + MI+ + E+F +M++A P +LN Y K+
Sbjct: 800 FGKPNDVT-YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 207/455 (45%), Gaps = 4/455 (0%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + Y+V++ + + K+ E A L EM G++ D +TYS LI K D+A
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+ +M ++ +Y I + K KA ++F + +SG++P AY ++I + +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
K ++ L+ EM+++ + +Y T++ + A ++ EM C ++
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+I + Q DA R+ M++ GI P + YN+L+ +A+ EA M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
++ N TY I Y ++ E A ++EM+ G+ PN + + +I + K GK+
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
A ++ + G+ D Y ++ + V A+ + E+R P+ I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
++ G +++A+ +F + + G ++ ++ ++ F R+ + E+ ++M G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
P++ +++ Y K + A L+ EM+ +G V
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 216/499 (43%), Gaps = 49/499 (9%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E +P +F YN ++ + +AK+ + A EM + G+ P+ +TY I+ + + F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
SA ++++M + V + VL + LI K +A S + + GI+ D Y +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+N K +A + EMR +G+ PD SY L+N + + +A S+F EM E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE--- 655
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
G+ P+V+ YN LL + + +A
Sbjct: 656 --------------------------------EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
L M K + N VTY T+I Y KS + +A L EM+ +G+ P++ Y+T++
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--------Q 362
+ ++RA +F G + +I + G +L+ L +
Sbjct: 744 RLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 363 PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
PN + I L + G +E A +F Q +A + + + ++ + + + A + V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 423 FEKMRSAGYFPDSHIIALVLNSYGK----LREFETADDLYSE-MQEEGCVFSDQVHFQML 477
F++ +AG PD + ++++N++ K + D ++++ ++GC S +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 478 SLYGARKDFNMLESLFERL 496
S + + + E + E +
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 230/568 (40%), Gaps = 59/568 (10%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + V+L +LR + +L ++ M +R + D TY LI + G
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV------ 237
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
Q+ +D VL+ E + A+ + + G+VP Y+ +I+ K
Sbjct: 238 --QLGKD------VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM--NEVNC-PLD 193
K ++A+ L+ EM GV D +YS L++ ++ A + EM + +N P
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
C ++ G ++ AK LF M G+ P +Y +L+ Y + + L
Sbjct: 350 YDCCICVMSKEGVMEKAK---ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 254 LMQRKEI-----------------------------------EQNVVTYNTMIKIYGKSL 278
M+++ I NVV Y T+IK + ++
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
A +++EM+ +GI P+ Y+++I KA ++D A ++ +G++ + Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 339 TMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDA 394
I Y A A + + E+R+ +P + T L + G++ EA +R D
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
G + D + ++ +N K + E+F +MR G PD +++N + KL + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
++ EM EEG + ++ +L + + + L + + + +
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 515 YERANRLNDASRIMNRMNKRRTFNSSLV 542
Y ++ L +A R+ + M + S V
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 119/254 (46%), Gaps = 43/254 (16%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL-------------ITC 63
P+ Y ++ ++ A LFDEM+ +G+ PD + Y+TL IT
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 64 FG--KEGM------FDSAISWLQQMEQDRVSGDL-----------------VLYSNLIEL 98
FG K+G F++ I+W+ + + + ++ V Y+ +I+
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 99 ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
K + A +F +++++ ++P ++ Y +++N + K E + +E G++PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEM---NEVN--CPLDLTTCNIMIDVYGQLDMAKDA 213
+ YS ++N +++ +AL + +M N V+ C L ++TC ++ + ++ + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 214 DRLFWSMRKMGIDP 227
+++ +M ++ P
Sbjct: 935 EKVMENMVRLQYIP 948
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 141/372 (37%), Gaps = 60/372 (16%)
Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI------------ 201
G D V + L + Y+ EA+ VF+ + L+ C +++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 202 -DVY-------------------------GQLDMAKD------------------ADRLF 217
DVY G + + KD A +L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
SM G+ P +Y+ L+ + + +A L M + + TY+ +I K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
+ A L+ EM + GI Y I + K G +++A LF + +SG+ Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 338 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRE----TAITILARAGRIEEATWVFRQAFD 393
++I Y R V LL E+++ N + T + + +G ++ A + ++
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
+G ++ ++ +I+ F +N ++ + + V ++M+ G PD ++ K + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 454 ADDLYSEMQEEG 465
A EM E G
Sbjct: 506 ARSFLVEMVENG 517
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 228/457 (49%), Gaps = 9/457 (1%)
Query: 17 PSVFAYNVVLRNVL---RAKQ-WELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
P+VF+YN++L+ + R+++ EL H + D+ R G PD +Y+T+I F KEG D
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
A S +M + D+V Y+++I K KA+ + + + +G++PD + YN++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+ + KEA +++MR GV+PD V+YS L++ +N + +EA +F M +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
++TT ++ Y + L M + GI P ++ L+ Y + +A+ +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
M+++ + N VTY +I I KS E A ++M + G+ P I Y+++I
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPR 368
K +RA L ++ G+ ++ + + ++I ++ + G V +++L + +PN I
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
T I AG+++EA + G + + +I + + + + + +F++M S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+G PD ++L + R A +LY + E G
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 206/435 (47%), Gaps = 14/435 (3%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P V Y++++ + + + A +FD M +RG+ P+ TY TL+ + +G
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
L M ++ + D ++S LI K +A+ +FS+++ G+ P+ V Y +I + K
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+ ++A L E+M ++G+ P + Y++L++ +K+ A + EM + L+
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
N +ID + + ++++LF M ++G+ P+V++YNTL+ Y A EA+ L M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
++ N VTY+T+I Y K E A L +EM++ G+ P+ ITY+ I+ + +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL---------RQPNTIP 367
A L+ ++ SG +I+ Y ++ + L A ++ L R N +
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM- 657
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
I L + GR +EA +F G V + + M E + ++F M
Sbjct: 658 ----IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Query: 428 SAGYFPDSHIIALVL 442
G DS ++ ++
Sbjct: 714 DNGCTVDSGMLNFIV 728
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 12/441 (2%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG---IAPDRYTYSTLITCFGKEGMFDSAI 74
S++ N L +V R A ++ M + G + PD TY LI C + G D
Sbjct: 49 SIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGF 107
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISI-FSRLKSSGIVPDLVAYNTMINV 133
+ L + + D + ++ L++ S A+ I R+ G +P++ +YN ++
Sbjct: 108 AALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKG 167
Query: 134 FGKAKLFKEARLLIEEM---REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+EA L+ M R G PD VSY+T++N + + +A S + EM +
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
D+ T N +I + A + +M K G+ P ++YN++L Y + EAI
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
+ M+ +E +VVTY+ ++ K+ +A + M RG++P TY T++ +
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
G L L + +G+ D ++ +I AY + G V A + ++RQ PN +
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
I IL ++GR+E+A F Q D G V+ +I K+ E+ +M
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 427 RSAGYFPDSHIIALVLNSYGK 447
G ++ +++S+ K
Sbjct: 468 LDRGICLNTIFFNSIIDSHCK 488
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 173/383 (45%), Gaps = 49/383 (12%)
Query: 98 LARKLSDYSK-----AISIFSRLKSSG---IVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
L R L+D ++ A+S ++R+ +G + PDL Y +I +A +
Sbjct: 53 LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112
Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
+ ++G + D ++++ LL + + +A+
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAM------------------------------ 142
Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM---QRKEIEQNVVT 266
D + M ++G P+V SYN LL+ + EA+ L +M + +VV+
Sbjct: 143 ----DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
Y T+I + K + +KA + EM +RGI P+ +TY++IIA KA +D+A + +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIE 382
+GV D + Y +++ Y G A L ++R +P+ + + L + GR
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 383 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
EA +F G +I+ +G +++ ++ + + + M G PD ++ ++++
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 443 NSYGKLREFETADDLYSEMQEEG 465
+Y K + + A ++S+M+++G
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQG 401
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E + SP + YN++L+ + + ++ A L+ + + G + TY+ ++ K +
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A+ Q + + + ++ +I+ K+ +A +F S+G+VP+ Y M
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 131 I-NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
N+ G+ L +E L M + G D+ + ++ ++ + A + + ++E +
Sbjct: 693 AENIIGQG-LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 190 CPLDLTTCNIMIDV 203
L+ +T ++ ID+
Sbjct: 752 FSLEASTASLFIDL 765
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 81/229 (35%), Gaps = 44/229 (19%)
Query: 295 IEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM---IVAYER----- 346
+ P+ TY +I +AG+LD + G +D + + + + A +R
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 347 ---------VGLVAH-------------------AKRLLHEL-------RQPNTIPRETA 371
+G + + A LLH + P+ + T
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
I + G ++A + + D G + D+ + +I + + +EV M G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
PD +L+ Y + + A +M+ +G V D V + +L Y
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG-VEPDVVTYSLLMDY 310
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 250/538 (46%), Gaps = 10/538 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ + P V + +++ + +A + A D MR +GI P+ +TY+TLI +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A+ ME V Y I+ K D A+ F ++K+ GI P++VA N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+ KA +EA+ + +++ G+ PD+V+Y+ ++ Y + + EA+ + +EM E C
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
D+ N +I+ + D +A ++F M++M + P+VV+YNTLL G+ EAI
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
LF M +K N +T+NT+ K+ E A ++ +M + G P+ TY+TII
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL-----RQPNT 365
K G++ A F +++ V D V T++ + L+ A +++ QP
Sbjct: 655 KNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 366 IPRETAI-TILARAGRIEEATWVFRQAFDAGEVKD-ISVFGCMIELFSRNKKYANVIEVF 423
+ E I +ILA AG I+ A + G +D S+ +I ++ + +F
Sbjct: 714 LFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772
Query: 424 EKM-RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
EK + G P L++ + E A D++ +++ GC+ + +L YG
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832
Query: 483 RKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSS 540
+ L L++ + + H++V +A ++DA + + R F+ +
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 211/454 (46%), Gaps = 4/454 (0%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
+ ++YN ++ +L+++ A ++ M G P TYS+L+ GK DS + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
++ME + ++ ++ I + + ++A I R+ G PD+V Y +I+ A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
+ A+ + E+M+ KPD V+Y TLL+ + +N ++EM + D+ T
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
I++D + +A MR GI P++ +YNTL+ +A+ LF M+
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
++ TY I YGKS + A ++M+ +GI PN + + + KAG+
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAIT 373
A +F L+ G+ D V Y M+ Y +VG + A +LL E+ +P+ I + I
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 374 ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
L +A R++EA +F + + + + ++ +N K IE+FE M G P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
++ + + K E A + +M + GCV
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 5/442 (1%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P+V+ + + +R + RA + A+ + M G PD TY+ LI D A
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
++M+ R D V Y L++ D +S ++ G VPD+V + +++ K
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
A F EA ++ MR+QG+ P+ +Y+TL+ + H+ +AL +F M + T
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+ ID YG+ + A F M+ GI P++V+ N L +A EA +F ++
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
+ + VTYN M+K Y K E ++A L+ EM G EP+ I +++I KA ++D
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
A +F +++ ++ V Y T++ + G + A L + Q PNTI T
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
L + + A + + D G V D+ + +I +N + + F +M+ Y
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY- 674
Query: 433 PDSHIIALVLNSYGKLREFETA 454
PD + +L K E A
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDA 696
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 211/448 (47%), Gaps = 17/448 (3%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+ PS+ Y+ ++ + + + + GL EM G+ P+ YT++ I G+ G + A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 75 SWLQQMEQDRVSGDLVLYSNLIE---LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
L++M+ + D+V Y+ LI+ ARKL D +K +F ++K+ PD V Y T++
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKL-DCAK--EVFEKMKTGRHKPDRVTYITLL 335
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ F + + EM + G PD V+++ L++ + F EA M +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+L T N +I ++ DA LF +M +G+ P+ +Y + YG++ A+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F M+ K I N+V N + K+ +A + +++ G+ P+++TY+ ++ + K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
G++D A L ++ +G E D ++ ++I + V A ++ +++ P +
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T + L + G+I+EA +F G + F + + +N + +++ KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 428 SAGYFPD-----SHIIALVLNSYGKLRE 450
G PD + I LV N G+++E
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKN--GQVKE 661
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 209/499 (41%), Gaps = 45/499 (9%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E + P+V YN +L + + + + A LF+ M Q+G P+ T++TL C K
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A+ L +M D+ Y+ +I K +A+ F ++K + PD V T+
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 683
Query: 131 INVFGKAKLFKEARLLI------------------------------------EEMREQG 154
+ KA L ++A +I E + G
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743
Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAE--MNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
+ D S + Y H V E ++ L T N++I + DM +
Sbjct: 744 ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
A +F ++ G P V +YN LL YG++ E L++ M E E N +T+N +I
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 273 IYGKSLEHEKATNLMQE-MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVE 331
K+ + A +L + M +R P A TY +I K+G+L A LF+ + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 332 IDPVLYQTMIVAYERVG----LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWV 387
+ +Y +I + + G A KR++ E +P+ + L GR++E
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GYFPDSHIIALVLNSYG 446
F++ ++G D+ + +I ++ + + +F +M+++ G PD + ++ + G
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 447 KLREFETADDLYSEMQEEG 465
E A +Y+E+Q G
Sbjct: 1044 IAGMVEEAGKIYNEIQRAG 1062
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 202/439 (46%), Gaps = 11/439 (2%)
Query: 32 AKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVL 91
K E+A+ +FD M++R I D TY T+ +G A L++M + +
Sbjct: 132 GKLEEMAY-VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 92 YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
Y+ LI L K ++A+ ++ R+ G P L Y++++ GK + L++EM
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG---QLD 208
G+KP+ +++ + + K EA + M++ C D+ T ++ID +LD
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 209 MAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 268
AK+ +F M+ P V+Y TLL + + + M++ +VVT+
Sbjct: 311 CAKE---VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 269 TMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSS 328
++ K+ +A + + M+++GI PN TY+T+I + +LD A LF + S
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEA 384
GV+ Y I Y + G A +++ PN + ++ LA+AGR EA
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
+F D G V D + M++ +S+ + I++ +M G PD ++ ++N+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 445 YGKLREFETADDLYSEMQE 463
K + A ++ M+E
Sbjct: 548 LYKADRVDEAWKMFMRMKE 566
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 204/464 (43%), Gaps = 47/464 (10%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK---------- 66
P VF YN ++ +++ Q + A F +M++ + PD T TL+ K
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 67 --------------------------EGMFDSAISWLQQMEQDRVS--GDLVLYSNLIEL 98
E D+A+S+ +++ + + GD +L +I
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP-IIRY 758
Query: 99 ARKLSDYSKAISIFSRL-KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
+ K ++ S A ++F + K G+ P L YN +I +A + + A+ + +++ G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
D +Y+ LL+ Y ++ K E ++ EM+ C + T NI+I + DA L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 218 WS-MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
+ M P+ +Y L+ ++ EA LF M N YN +I +GK
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
+ E + A L + M G+ P+ TYS ++ G++D F++L+ SG+ D V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 337 YQTMIVAYERVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQA 391
Y +I + + A L +E++ P+ + I L AG +EEA ++ +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
AG ++ F +I +S + K + V++ M + G+ P++
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + YN+++ +L A E+A +F +++ G PD TY+ L+ +GK G D
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
++M + + ++ +I K + A+ ++ L S P Y +I+
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
K+ EA+ L E M + G +P+ Y+ L+N + + + A ++F M + DL
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
T ++++D + + F +++ G++P VV YN ++ G++ EA+ LF M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 256 Q-RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
+ + I ++ TYN++I G + E+A + E+Q G+EPN T++ +I + +GK
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTM 340
+ A ++Q + + G + Y+ +
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 131/560 (23%), Positives = 235/560 (41%), Gaps = 83/560 (14%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P++ YN ++ +LR + + A LF M G+ P YTY I +GK G SA+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 77 LQQMEQDRVSGDLV-LYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
++M+ ++ ++V ++L LA+ D +A IF LK G+VPD V YN M+ +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRD-REAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 136 KAKLFKEARLLIEEMREQGVKPDT-----------------------------------V 160
K EA L+ EM E G +PD V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
+Y+TLL +N K EA+ +F M + CP + T N + D + D A ++ + M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
MG P V +YNT++ + EA+ F M +K + + VT T++ K+
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLI 693
Query: 281 EKATNLMQE-MQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
E A ++ + N +P + + +I +I +AG +D A ++L ++G+ D
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDSIL 752
Query: 339 TMIVAYE-RVGLVAHAKRLLHELR-----QPNTIPRETAITILARAGRIEEATWVFRQAF 392
I+ Y + V+ A+ L + QP I L A IE A VF Q
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 393 DAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS-------------------AG--- 430
G + D++ + +++ + ++ K + E++++M + AG
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 431 --------------YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQM 476
+ P + +++ K A L+ M + GC + ++ +
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 477 LSLYGARKDFNMLESLFERL 496
++ +G + + +LF+R+
Sbjct: 933 INGFGKAGEADAACALFKRM 952
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 38/258 (14%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+SP+ Y ++ + ++ + A LF+ M G P+ Y+ LI FGK G D+A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ ++M ++ V DL YS L++ + + + F LK SG+ PD+V YN +IN
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 135 GKAKLFKEARLLIEEMR-EQGVKPDTVSYSTL-LNLYVENHKFVEALSVFAEMNEVNCPL 192
GK+ +EA +L EM+ +G+ PD +Y++L LNL
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL------------------------ 1042
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
G M ++A +++ +++ G++P+V ++N L+R Y + A ++
Sbjct: 1043 ------------GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Query: 253 RLMQRKEIEQNVVTYNTM 270
+ M N TY +
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 230/476 (48%), Gaps = 18/476 (3%)
Query: 7 DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK 66
D I AR P+VF YN+++ + + E A GLF+EM+ RG+ PD TY+++I FGK
Sbjct: 252 DMIGAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 67 EGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
G D + + ++M+ D++ Y+ LI K + + +K +G+ P++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
Y+T+++ F K + ++A +MR G+ P+ +Y++L++ + +A + EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 187 EVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFG 246
+V ++ T +ID + K+A+ LF M G+ P++ SYN L+ + +A+
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 247 EAIHLFRLMQRKEIEQNVVTYNTMIKIYG-KSLEH-EKATNLMQEMQNRGIEPNAITYST 304
A+ L ++ + I+ +++ Y T I+G SLE E A +M EM+ GI+ N++ Y+T
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTF--IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 305 IIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR--- 361
++ + K+G L +++ +E+ V + +I + LV+ A + +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 362 --QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANV 419
Q N I L + ++E AT +F Q G V D + + L N K NV
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY---TSLMDGNFKQGNV 664
Query: 420 IEVF---EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
+E +KM G D ++ + + A EM EG + D+V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG-IHPDEV 719
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 225/481 (46%), Gaps = 7/481 (1%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P ++ + ++ E A F +M++ + P + + L+ F K G D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+ M + Y+ +I+ K D A +F +K G+VPD V YN+MI+ FGK
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+ EEM++ +PD ++Y+ L+N + + K L + EM ++ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+ ++D + + M + A + + MR++G+ P+ +Y +L+ + +A L M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
+ +E NVVTY +I + ++A L +M G+ PN +Y+ +I + KA +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
RA L +L+ G++ D +LY T I + + AK +++E+++ N++ T +
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA-GY 431
++G E + + + + F +I+ +NK + ++ F ++ + G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLES 491
++ I +++ K + E A L+ +M ++G V D+ + L + G K N+LE+
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-PDRTAYTSL-MDGNFKQGNVLEA 667
Query: 492 L 492
L
Sbjct: 668 L 668
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 197/475 (41%), Gaps = 55/475 (11%)
Query: 8 WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYT--YSTLITCFG 65
W + SV +Y +V + A+ + A+ + EM D + +ST C
Sbjct: 131 WSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVP 190
Query: 66 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
G+FD+ L+S LI+L +AI FS++K + P
Sbjct: 191 GFGVFDA------------------LFSVLIDLGM----LEEAIQCFSKMKRFRVFPKTR 228
Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
+ N +++ F K + + ++M G +P +Y+ +++ + A +F EM
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
D T N MID +G++ D F M+ M +P V++YN L+ + +
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
+ +R M+ ++ NVV+Y+T++ + K ++A +M+ G+ PN TY+++
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
I K G L A L ++ GVE + V Y +I
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG---------------------- 446
Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
L A R++EA +F + AG + +++ + +I F + K +E+ +
Sbjct: 447 ---------LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY 480
++ G PD + + L + E A + +EM+E G + ++ ++ Y
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 71/376 (18%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P+V +Y+ ++ + + A + +MR+ G+ P+ YTY++LI K G A
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+M Q V ++V Y+ LI+ +A +F ++ ++G++P+L +YN +I+ F K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 137 AK-------LFKE----------------------------ARLLIEEMREQGVKPDTVS 161
AK L E A++++ EM+E G+K +++
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 162 YSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID-------VYGQLD------ 208
Y+TL++ Y ++ E L + EM E++ + + T ++ID V +D
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 209 ------------------MAKD-----ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
+ KD A LF M + G+ P +Y +L+ +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
EA+ L M ++ +++ Y +++ + +KA + ++EM GI P+ + ++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 306 IAIWGKAGKLDRAAML 321
+ + G +D A L
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + Y + + ++ E A + +EM++ GI + Y+TL+ + K G +
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAYNTMINVFG 135
L +M++ + +V + LI+ K SKA+ F+R+ + G+ + + MI+
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
K + A L E+M ++G+ PD +Y++L++ + +EAL++ +M E+ LDL
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
++ + + A M GI P V ++L+ + E EA+ L +
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 744
Query: 256 QRKEI 260
+ ++
Sbjct: 745 MKHQL 749
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 220/433 (50%), Gaps = 4/433 (0%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P +N +++ + + A L D M + G PD TY++++ + G A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
L++ME+ V D+ YS +I+ + AIS+F +++ GI +V YN+++
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
KA + + LL+++M + + P+ ++++ LL+++V+ K EA ++ EM ++
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T N ++D Y + +A+ + M + P +V++ +L++ Y + + + +FR
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
+ ++ + N VTY+ +++ + +S + + A L QEM + G+ P+ +TY ++ GK
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
L++A +F+ L+ S +++ V+Y T+I + G V A L L +PN +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
I+ L + G + EA + R+ + G + + +I R+ ++ E+M+S G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 431 YFPDSHIIALVLN 443
+ D+ I +V++
Sbjct: 574 FSADASSIKMVID 586
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 241/523 (46%), Gaps = 10/523 (1%)
Query: 18 SVFAYNVVLRNVLRAKQWEL----AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
S+ NV R LR+ ++ A LF EM + P +S + + F+
Sbjct: 48 SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI-N 132
+ + +Q+E + ++ ++ + +I + A S+ ++ G PD +NT+I
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+F + K+ EA +L++ M E G +PD V+Y++++N + AL + +M E N
Sbjct: 168 LFLEGKV-SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
D+ T + +ID + A LF M GI SVV+YN+L+R +A + + L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
+ M +EI NV+T+N ++ ++ K + ++A L +EM RGI PN ITY+T++ +
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
+L A + + + D V + ++I Y V V ++ + + +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 373 TIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
+IL ++G+I+ A +F++ G + D+ +G +++ N K +E+FE ++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNM 488
+ + ++ K + E A +L+ + +G + + M+S + +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 489 LESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
L +++ D N ++ + + R L +++++ M
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 189/396 (47%), Gaps = 36/396 (9%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+V ++D + E P V YN ++ + R+ LA L +M +R + D +TYST+I
Sbjct: 177 AVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI----------------------ELA 99
++G D+AIS ++ME + +V Y++L+ E+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 100 RKLSDYSKAISIFSR-------------LKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
+ ++ + +F + + + GI P+++ YNT+++ + EA +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQ 206
++ M PD V++++L+ Y + + + VF +++ + T +I++ + Q
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 207 LDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVT 266
K A+ LF M G+ P V++Y LL + +A+ +F +Q+ +++ +V
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 267 YNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLR 326
Y T+I+ K + E A NL + +G++PN +TY+ +I+ K G L A +L +K+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 327 SSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
G + Y T+I A+ R G + + +L+ E++
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 21 AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
Y+++++ ++ + +LA LF EM G+ PD TY L+ G + A+ + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 81 EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
++ ++ +V+Y+ +IE K A ++F L G+ P+++ Y MI+ K
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
EA +L+ +M E G P+ +Y+TL+ ++ + + + EM D ++ ++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 201 IDVY--GQLD 208
ID+ G+LD
Sbjct: 585 IDMLLSGELD 594
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
++++ + Y ++ + + + E A LF + +G+ P+ TY+ +I+ K+G
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A L++ME+D + + Y+ LI + D + + + +KS G D + +
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 131 INVFGKAKLFK 141
I++ +L K
Sbjct: 585 IDMLLSGELDK 595
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 221/446 (49%), Gaps = 5/446 (1%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E + P + + ++ + + A L D M + G PD TY ++
Sbjct: 159 AVALVDRM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G A+ ++ME+ + +V YS +I+ K + A+S+F+ ++ GI
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
D+V Y+++I + + ++ EM + + PD V++S L++++V+ K +EA +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ EM D T N +ID + + + +A+++F M G +P +V+Y+ L+ Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ + + LFR + K + N +TYNT++ + +S + A L QEM +RG+ P+ +T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y ++ G+L++A +F+K++ S + + +Y +I V A L L
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+P+ + I L + G + EA +FR+ + G D + +I
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLN 443
+ +E+ E+M+ G+ DS I +V++
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVID 603
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 232/495 (46%), Gaps = 8/495 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R P+ +N + V R KQ++L G M GI D YT + +I C+ ++
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A S L + + D + +S L+ S+A+++ R+ PDLV +T+I
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N EA +LI+ M E G +PD V+Y +LN ++ AL +F +M E N
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ +I+ID + DA LF M GI VV+Y++L+ + + +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
R M + I +VVT++ +I ++ K + +A L EM RGI P+ ITY+++I + K
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
L A +F + S G E D V Y +I +Y + V RL E+ PNTI
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T + ++G++ A +F++ G + +G +++ N + +E+FEKM+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
+ I ++++ + + A L+ + ++G V D V + ++ + G K +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM-IGGLCKKGS 540
Query: 488 MLES--LFERLDSDS 500
+ E+ LF ++ D
Sbjct: 541 LSEADMLFRKMKEDG 555
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 214/462 (46%), Gaps = 12/462 (2%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFD---EMRQRGIAPDRYTYSTLITCFGKEGMFD 71
Y P ++ ++ + A L D EM+QR PD T STLI +G
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVS 192
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+ + +M + D V Y ++ K + + A+ +F +++ I +V Y+ +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ K F +A L EM +G+K D V+YS+L+ + K+ + + EM N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ T + +IDV+ + +A L+ M GI P ++YN+L+ + + EA +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F LM K E ++VTY+ +I Y K+ + L +E+ ++G+ PN ITY+T++ + +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR--- 368
+GKL+ A LFQ++ S GV V Y ++ G + A + ++++
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 369 -ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
I + A ++++A +F D G D+ + MI + + +F KM+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
G PD +++ ++ ++ +L EM+ C FS
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV--CGFS 592
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 206/456 (45%), Gaps = 4/456 (0%)
Query: 19 VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
++ +++ R K+ A + + G PD T+STL+ F EG A++ +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 79 QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
+M + + DLV S LI S+A+ + R+ G PD V Y ++N K+
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
A L +M E+ +K V YS +++ ++ F +ALS+F EM D+ T +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
+I D ++ M I P VV+++ L+ V+ + EA L+ M +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
I + +TYN++I + K +A + M ++G EP+ +TYS +I + KA ++D
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITI 374
LF+++ S G+ + + Y T+++ + + G + AK L E+ P+ + +
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
L G + +A +F + + I ++ +I K + +F + G PD
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSD 470
+++ K AD L+ +M+E+GC D
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 204/458 (44%), Gaps = 4/458 (0%)
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+ AI + M Q R + ++ L + Y + ++ +GI D+ M
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
IN + + K A ++ + G +PDT+++STL+N + + EA+++ M E+
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
DL T + +I+ +A L M + G P V+Y +L ++ A+
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
LFR M+ + I+ +VV Y+ +I K + A +L EM+ +GI+ + +TYS++I
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
GK D A + +++ + D V + +I + + G + AK L +E+ P+TI
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
+ I + + EA +F G DI + +I + + K+ + + +F ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
S G P++ ++ + + + A +L+ EM G S + +L +
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDA 524
N +FE++ +++++ A++++DA
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 232/489 (47%), Gaps = 4/489 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R P+V +N + + + KQ+EL L +M +GIA YT S +I CF +
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A S + ++ + D V+++ L+ S+A+ + R+ G P L+ NT++
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N +A +LI+ M E G +P+ V+Y +LN+ ++ + A+ + +M E N
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
LD +I+ID + +A LF M G +++YNTL+ + A + + L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
R M +++I NVVT++ +I + K + +A L++EM RGI PN ITY+++I + K
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+L+ A + + S G + D + + +I Y + + L E+ NT+
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T + ++G++E A +F++ DI + +++ N + +E+F K+
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
+ D I ++++ + + A DL+ + +G + + M+S + +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 488 MLESLFERL 496
+ LF ++
Sbjct: 561 KADILFRKM 569
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 213/443 (48%), Gaps = 6/443 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P++ N ++ + + A L D M + G P+ TY ++ K G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+ L++ME+ + D V YS +I+ K A ++F+ ++ G D++ YNT+I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
F A + + L+ +M ++ + P+ V++S L++ +V+ K EA + EM +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ T N +ID + + + ++A ++ M G DP ++++N L+ Y +A + + L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
FR M + + N VTYNT+++ + +S + E A L QEM +R + P+ ++Y ++
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
G+L++A +F K+ S +E+D +Y +I V A L L A
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 372 ITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
I L R + +A +FR+ + G D + +I + E+ E+M+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 428 SAGYFPDSHIIALVLN--SYGKL 448
S+G+ D + +V+N S G+L
Sbjct: 606 SSGFPADVSTVKMVINMLSSGEL 628
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 182/395 (46%), Gaps = 4/395 (1%)
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A+ + M Q R ++ ++ L K Y +++ +++S GI + + M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
IN F + + A + ++ + G +PDTV ++TLLN + EAL + M E+
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
L T N +++ DA L M + G P+ V+Y +L V ++ A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
L R M+ + I+ + V Y+ +I K + A NL EM+ +G + + ITY+T+I +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
AG+ D A L + + + + V + +I ++ + G + A +LL E+ Q PNTI
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
+ I + R+EEA + G DI F +I + + + + +E+F +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
G ++ ++ + + + E A L+ EM
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 171/352 (48%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE Y++++ + + + A LF+EM +G D TY+TLI F G +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D L+ M + ++S ++V +S LI+ K +A + + GI P+ + YN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I+ F K +EA +++ M +G PD ++++ L+N Y + ++ + L +F EM+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
+ T N ++ + Q + A +LF M + P +VSY LL + +A+
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
+F +++ ++E ++ Y +I + + + A +L + +G++ +A Y+ +I+
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
+ L +A +LF+K+ G D + Y +I A+ A L+ E++
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 21 AYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQM 80
YN +++ ++ + E+A LF EM R + PD +Y L+ G + A+ ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 81 EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLF 140
E+ ++ D+ +Y +I S A +F L G+ D AYN MI+ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 141 KEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIM 200
+A +L +M E+G PD ++Y+ L+ ++ + A + EM P D++T ++
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 201 IDVY--GQLD 208
I++ G+LD
Sbjct: 620 INMLSSGELD 629
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 59/131 (45%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+++ + Y +++ + A + + A LF + +G+ D Y+ +I+ ++
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A ++M ++ + D + Y+ LI D + A + +KSSG D+ +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 131 INVFGKAKLFK 141
IN+ +L K
Sbjct: 620 INMLSSGELDK 630
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 239/481 (49%), Gaps = 9/481 (1%)
Query: 22 YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
+N ++ +A + A LF EM + G+ D T++T+I G G A S L++ME
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 82 QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
+ +S D Y+ L+ L D A+ + +++ G+ PD V + ++++ + K+
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
E +I EM ++ D S ++ +YV V+A ++F E +++C L TT +I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-ERFQLDCVLSSTTLAAVI 486
Query: 202 DVYGQLDMAKDADRLFWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEI 260
DVY + + +A+ +F+ R M G V+ YN +++ YG+A+L +A+ LF+ M+ +
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 261 EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAM 320
+ TYN++ ++ ++A ++ EM + G +P TY+ +IA + + G L A
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 321 LFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLLHELR-QPNTIPRETAITILA 376
L++ + +GV+ + V+Y ++I + G+V A R++ E Q N I + I +
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
+ G +EEA V+ + D+ D++ M+ L + + +F +R G D
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVI 725
Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNMLESLFER 495
A ++ Y + + A ++ EM+E G + SD F Q+++ Y A + LF
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESG-LLSDCTSFNQVMACYAADGQLSECCELFHE 784
Query: 496 L 496
+
Sbjct: 785 M 785
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/558 (22%), Positives = 236/558 (42%), Gaps = 47/558 (8%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + VL + + K + EM + I D ++ ++ + EG+ A +
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF-SRLKSSGIVPDLVAYNTMINVFG 135
++ + D V L + +I++ + + +A ++F + SG D++ YN MI +G
Sbjct: 468 FERFQLDCVLSSTTL-AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
KAKL ++A L + M+ QG PD +Y++L + EA + AEM + C
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
T MI Y +L + DA L+ +M K G+ P+ V Y +L+ + E+ + EAI FR+M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
+ ++ N + ++IK Y K E+A + +M++ P+ ++++++ G +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR------- 368
A +F LR G D + + TM+ Y+ +G++ A + E+R+ +
Sbjct: 707 SEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 369 ---------------------------------ETAITILARAGRIEEATWVFRQAFDAG 395
+T T+L + G EA + A++
Sbjct: 766 MACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN-- 823
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
E K ++ LFS YA +E +++ S G P H V+ +Y + + A
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQELTS-GEIPREHFAYNAVIYTYSASGDIDMA 882
Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGI 514
Y MQE+G ++ +YG ++ + RL + L V
Sbjct: 883 LKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDA 942
Query: 515 YERANRLNDASRIMNRMN 532
Y ANR + A + M+
Sbjct: 943 YVSANRQDLADVVKKEMS 960
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 229/549 (41%), Gaps = 62/549 (11%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
R + + + Y P+V YN+VLR + RA +W+ + EM G+ P TY L
Sbjct: 127 RVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGML 186
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
+ +GK G+ A+ W++ M Q D V + ++ + + ++ +A F + +
Sbjct: 187 VDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKV 246
Query: 121 VPDLVAYN---------TMINV--FGKAKLFK-EARLLIEEMREQGVKPD--------TV 160
DL + + + +N+ F +LFK AR IE+ D T
Sbjct: 247 DLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTS 306
Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
+++TL++LY + + +A ++F+EM + P+D T N MI G +A+ L M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK---- 276
+ GI P +YN LL ++ +A A+ +R +++ + + VT+ ++ I +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 277 ---------------SLEHEKATNLMQEMQNRGIEPNA---------------ITYSTII 306
++ +MQ N G+ A T + +I
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 307 AIWGKAGKLDRAAMLFQKLRS-SGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNT 365
++ + G A +F R+ SG D + Y MI AY + L A L ++ T
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 366 IPRETA----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
P E +LA ++EA + + D+G + MI + R ++ ++
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
++E M G P+ + ++N + + E A + M+E G V S+ H + SL
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG-VQSN--HIVLTSLIK 663
Query: 482 ARKDFNMLE 490
A LE
Sbjct: 664 AYSKVGCLE 672
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 245/530 (46%), Gaps = 15/530 (2%)
Query: 20 FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
F + VL R A F E++ G P TY+ L+ FGK G++ A+S L++
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 80 MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
ME++ D V Y+ L+ + +A + + G++P+ + Y T+I+ +GKA
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
EA L M+E G P+T +Y+ +L+L + + E + + +M C + T N
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
M+ + G M K +R+F M+ G +P ++NTL+ YG +A ++ M R
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
V TYN ++ + + N++ +M+++G +P +YS ++ + K G
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITIL 375
+ +++ + +L +T+++A + +A ++R + +P+ + + ++I
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
R ++A + + G D+ + +++++ R + E+ + + + PD
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG---CVFSDQVHFQMLSLYGARKDFNMLESL 492
V+ + + + A + SEM E G C+F+ + +S Y A F +E +
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT---YNTFVSGYTAMGMFAEIEDV 758
Query: 493 FERL-DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNSSL 541
E + +D N+ VV G Y RA + ++A M+ ++K +TF+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDG-YCRAGKYSEA---MDFVSKIKTFDPCF 804
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 231/545 (42%), Gaps = 46/545 (8%)
Query: 34 QWELAHGLFDEM----RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
WE A LF+ + + D + G+E + A L ++ D+
Sbjct: 151 HWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDV 210
Query: 90 VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK------------- 136
Y+ ++ + Y KAI +F R+K G P LV YN +++VFGK
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 137 -----------------------AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENH 173
L +EA+ E++ G +P TV+Y+ LL ++ +
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 174 KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYN 233
+ EALSV EM E +CP D T N ++ Y + +K+A + M K G+ P+ ++Y
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 234 TLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNR 293
T++ YG+A EA+ LF M+ N TYN ++ + GK + ++ +M++
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 294 GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA 353
G PN T++T++A+ G G +F++++S G E D + T+I AY R G A
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 354 KRLLHELRQPN----TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
++ E+ + + LAR G V G + + M++
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFS 469
+++ Y + + +++ FP ++ +L + K R ++ ++ ++ G
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG-YKP 629
Query: 470 DQVHF-QMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIM 528
D V F MLS++ ++ E + E + D ++ + +Y R A I+
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 529 NRMNK 533
+ K
Sbjct: 690 KTLEK 694
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 215/506 (42%), Gaps = 44/506 (8%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P YN +L+ +A + A + EM + D TY+ L+ + + G A
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
++ M + V + + Y+ +I+ K +A+ +F +K +G VP+ YN ++++
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVEN--HKFVEALSVFAEMNEVNCPL 192
GK E ++ +M+ G P+ +++T+L L KFV VF EM
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN--RVFREMKSCGFEP 489
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
D T N +I YG+ DA +++ M + G + V +YN LL + ++
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKS---LEHEKATNLMQEMQ------------------ 291
M+ K + +Y+ M++ Y K L E+ N ++E Q
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 292 --------------NRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
G +P+ + ++++++I+ + D+A + + +R G+ D V Y
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 338 QTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFD 393
+++ Y R G A+ +L L +P+ + T I R G ++EA + + +
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
G I + + ++ +A + +V E M P+ +V++ Y + ++
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSL 479
A D S+++ F DQ Q L+L
Sbjct: 790 AMDFVSKIKTFDPCFDDQ-SIQRLAL 814
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 213/469 (45%), Gaps = 13/469 (2%)
Query: 83 DRVSGDLVLYSNLIELARKLSD---YSKAISIFSRL----KSSGIVPDLVAYNTMINVFG 135
D V +L L ++L+ L + L D + +A+ +F L S + D + + G
Sbjct: 128 DSVKSEL-LRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILG 186
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
+ + A L++++ Q D +Y+T+L+ Y K+ +A+ +F M E+ L
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 196 TCNIMIDVYGQLDMA-KDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T N+++DV+G++ + + + MR G+ + +T+L L EA F
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
++ E VTYN +++++GK+ + +A ++++EM+ +++TY+ ++A + +AG
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRET 370
AA + + + GV + + Y T+I AY + G A +L + +++ PNT
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
+++L + R E + G + + + M+ L V VF +M+S G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE 490
+ PD ++++YG+ A +Y EM G + +L+ + D+ E
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 491 SLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKRRTFNS 539
++ + S + + ++ Y + RI NR+ + + F S
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 140/280 (50%)
Query: 13 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
A ++ V YN +L + R W + +M+ +G P +YS ++ C+ K G +
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
++++ ++ +L L+ K + + F+ K G PD+V +N+M++
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+F + ++ +A ++E +RE G+ PD V+Y++L+++YV + +A + + +
Sbjct: 640 IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
DL + N +I + + + ++A R+ M + GI P + +YNT + Y +F E +
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQN 292
M + + N +T+ ++ Y ++ ++ +A + + +++
Sbjct: 760 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 101/194 (52%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E + PS +L + + + F ++ G PD ++++++ F + M+
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A L+ + +D +S DLV Y++L+++ + + KA I L+ S + PDLV+YNT+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I F + L +EA ++ EM E+G++P +Y+T ++ Y F E V M + +C
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 191 PLDLTTCNIMIDVY 204
+ T +++D Y
Sbjct: 768 RPNELTFKMVVDGY 781
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+++ P + +YN V++ R + A + EM +RGI P +TY+T ++ + GMF
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
++ M ++ + + + +++ + YS+A+ S++K+
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 216/434 (49%), Gaps = 5/434 (1%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y PS+ N +L + A L D+M + G PD T++TL+ + A+
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ +++M DLV Y +I K + A+++ ++++ I D+V YNT+I+
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K K +A L +M +G+KPD +Y+ L++ ++ +A + ++M E N DL
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMG-IDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
N +ID + + +A++L+ M K P VV+YNTL++ + + + E + +FR
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
M ++ + N VTY T+I + ++ + + A + ++M + G+ P+ +TY+ ++ G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
++ A ++F+ ++ +++D V Y TMI A + G V L L +PN +
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
T ++ R G EEA +F + + G + + + +I R+ A E+ ++MRS
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 430 GYFPDSHIIALVLN 443
G+ D+ LV N
Sbjct: 561 GFAGDASTFGLVTN 574
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 208/447 (46%), Gaps = 11/447 (2%)
Query: 27 RNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
R VL+ + + A GLF +M + P +S L++ K FD IS +QM+ +S
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 87 GDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLL 146
+L YS I + S S A++I ++ G P +V N+++N F EA L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 147 IEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY-- 204
+++M E G +PDTV+++TL++ +++K EA+++ M C DL T +I+
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 205 -GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
G+ D+A + L M K I+ VV YNT++ + + +A LF M+ K I+ +
Sbjct: 228 RGEPDLALN---LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
V TYN +I A+ L+ +M + I P+ + ++ +I + K GKL A L+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 324 KL-RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
++ +S D V Y T+I + + V + E+ Q NT+ T I +A
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
+ A VF+Q G DI + +++ N + VFE M+ D
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 439 ALVLNSYGKLREFETADDLYSEMQEEG 465
++ + K + E DL+ + +G
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKG 491
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 162/344 (47%), Gaps = 37/344 (10%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ + V YN ++ + + K + A LF++M +GI PD +TY+ LI+C G +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL-KSSGIVPDLVAYNT 129
A L M + ++ DLV ++ LI+ K +A ++ + KS PD+VAYNT
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 130 MINVFGKAK-------LFKE----------------------------ARLLIEEMREQG 154
+I F K K +F+E A+++ ++M G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 155 VKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDAD 214
V PD ++Y+ LL+ N AL VF M + + LD+ T MI+ + +D
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 215 RLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 274
LF S+ G+ P+VV+Y T++ + L EA LF M+ N TYNT+I+
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Query: 275 GKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
+ + + L++EM++ G +A T+ + + G+LD++
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 7/445 (1%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
++PSV+ N +L +V+++ + EM +R I PD T++ LI EG F+ +
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+Q+ME+ + +V Y+ ++ K + AI + +KS G+ D+ YN +I+
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
++ + LL+ +MR++ + P+ V+Y+TL+N + K + A + EM +
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T N +ID + K+A ++F+ M G+ PS VSY LL + F A +
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M+R + +TY MI K+ ++A L+ EM GI+P+ +TYS +I + K G+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR----LLHELRQPNTIPRET 370
A + ++ G+ + ++Y T+I R+G + A R ++ E +
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
+T L +AG++ EA R G + + F C+I + + + VF++M G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 431 YFPDSHIIALVLNSY---GKLREFE 452
+ P +L G LRE E
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAE 598
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 212/454 (46%), Gaps = 6/454 (1%)
Query: 16 SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
+PSV Y++++R LR + + +F M G P YT + ++ K G S S
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 76 WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
+L++M + ++ D+ ++ LI + + K+ + +++ SG P +V YNT+++ +
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
K FK A L++ M+ +GV D +Y+ L++ +++ + + +M + +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
T N +I+ + A +L M G+ P+ V++N L+ + F EA+ +F +M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
+ K + + V+Y ++ K+ E + A M+ G+ ITY+ +I K G L
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETA 371
D A +L ++ G++ D V Y +I + +VG AK ++ + + PN I T
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
I R G ++EA ++ G +D F ++ + K A E M S G
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
P++ ++N YG E A ++ EM + G
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/594 (22%), Positives = 253/594 (42%), Gaps = 77/594 (12%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRG--------------------- 49
E++ Y+P++ YN VL + +++ A L D M+ +G
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 50 --------------IAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNL 95
I P+ TY+TLI F EG A L +M +S + V ++ L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 96 IELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
I+ ++ +A+ +F +++ G+ P V+Y +++ K F AR M+ GV
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399
Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
++Y+ +++ +N EA+ + EM++ D+ T + +I+ + ++ K A
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459
Query: 216 LFWSMRKMGIDPSVVSYNTL-------------LRVYGEAELFG---------------- 246
+ + ++G+ P+ + Y+TL +R+Y L G
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519
Query: 247 ------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
EA R M I N V+++ +I YG S E KA ++ EM G P
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
TY +++ K G L A + L + +D V+Y T++ A + G +A A L E+
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
Query: 361 RQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEV-KDISVFGCMIELFSRNKK 415
Q P++ + I+ L R G+ A ++A G V + ++ C ++ + +
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Query: 416 YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 475
+ I E+M + G+ PD +++ Y ++ + E +DL EM + + +
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Query: 476 MLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVAGIYERANRLNDASRIM 528
+L Y RKD + L+ + + + +K H +V GI E +N L +I+
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE-SNMLEIGLKIL 812
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 206/483 (42%), Gaps = 33/483 (6%)
Query: 8 WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
++ E +PS +Y V+L + + +++LA G + M++ G+ R TY+ +I K
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 68 GMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAY 127
G D A+ L +M +D + D+V YS LI K+ + A I R+ G+ P+ + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
+T+I + KEA + E M +G D +++ L+ + K EA M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
+ + + +I+ YG A +F M K+G P+ +Y +LL+ + E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A + + + V YNT++ KS KA +L EM R I P++ TY+++I+
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
+ GK A + ++ + G + PN +
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVL------------------------------PNKVM 686
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
+ + +AG+ + + Q + G DI MI+ +SR K ++ +M
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
+ P+ ++L+ Y K ++ T+ LY + G + D++ L L + N
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHSLVL--GICESN 803
Query: 488 MLE 490
MLE
Sbjct: 804 MLE 806
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 191/453 (42%), Gaps = 9/453 (1%)
Query: 16 SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
SP+ Y+ ++ N R + A +++ M G D +T++ L+T K G A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 76 WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
+++ M D + + V + LI + KA S+F + G P Y +++
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
K +EA ++ + DTV Y+TLL ++ +A+S+F EM + + D
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMR---KMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
T +I G K + ++ + + P+ V Y + +A + I+
Sbjct: 650 TYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
M ++VT N MI Y + + EK +L+ EM N+ PN TY+ ++ + K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE-LRQPNTIPRETA 371
+ + +L++ + +G+ D + ++++ ++ ++L + + + R T
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 372 ITILARAGRIEEATWVF---RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
++++ E W F + G D M+ + +RN ++ V +M
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 429 AGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
G P+S ++N ++ + +TA + EM
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 180/430 (41%), Gaps = 10/430 (2%)
Query: 3 VAILDWINEEARYS--PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+AIL EAR + P+ Y + + +A QW+ ++M G PD T + +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I + + G + L +M +L Y+ L+ K D S + ++ + +GI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
+PD + ++++ ++ + + +++ +GV+ D +++ L++ N + A
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
+ M + LD TC+ M+ V + +++ + M K GI P Y L+
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
A + M +I V + M++ K + ++AT L++ M + P
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHEL 360
+++T++ + K G + A L + + G+++D V Y +I G +A A L E+
Sbjct: 966 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Query: 361 RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEV--KDISVFGCMIELFSRNKKYAN 418
+ + T L R E AF ++ KD+ G + + + N
Sbjct: 1026 KGDGFLANATTYKALIRGLLARET------AFSGADIILKDLLARGFITSMSLSQDSHRN 1079
Query: 419 VIEVFEKMRS 428
+ EK+++
Sbjct: 1080 LKMAMEKLKA 1089
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 203/425 (47%), Gaps = 13/425 (3%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + ++R R + A + + + G PD TY+ +I+ + K G ++A+S
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSK---AISIFSRLKSSGIVPDLVAYNTMINV 133
L +M VS D+V Y+ ++ R L D K A+ + R+ PD++ Y +I
Sbjct: 195 LDRMS---VSPDVVTYNTIL---RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
+ A L++EMR++G PD V+Y+ L+N + + EA+ +M C +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
+ T NI++ DA++L M + G PSVV++N L+ L G AI +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
M + + N ++YN ++ + K + ++A ++ M +RG P+ +TY+T++ K G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRE 369
K++ A + +L S G + Y T+I + G A +LL E+R +P+TI
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
+ + L+R G+++EA F + G + F ++ ++++ I+ M +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 430 GYFPD 434
G P+
Sbjct: 549 GCKPN 553
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 203/445 (45%), Gaps = 7/445 (1%)
Query: 26 LRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRV 85
LR ++R + E + M G PD +TLI F + G A L+ +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 86 SGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARL 145
D++ Y+ +I K + + A+S+ R+ S PD+V YNT++ + K+A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 146 LIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
+++ M ++ PD ++Y+ L+ + A+ + EM + C D+ T N++++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 206 QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 265
+ +A + M G P+V+++N +LR + +A L M RK +VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 266 TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 325
T+N +I + +A +++++M G +PN+++Y+ ++ + K K+DRA +++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 326 RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 381
S G D V Y TM+ A + G V A +L++L P I T I LA+AG+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 382 EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 441
+A + + D + ++ SR K I+ F + G P++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 442 LNSYGKLREFETADDLYSEMQEEGC 466
+ K R+ + A D M GC
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGC 550
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 181/373 (48%), Gaps = 5/373 (1%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ +LD + + Y P V Y +++ R A L DEMR RG PD TY+ L
Sbjct: 222 QAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
+ KEG D AI +L M +++ ++ ++ + A + + + G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
P +V +N +IN + L A ++E+M + G +P+++SY+ LL+ + + K A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
M C D+ T N M+ + +DA + + G P +++YNT++
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
+A G+AI L M+ K+++ + +TY++++ + + ++A E + GI PNA+
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI--VAYERVGLVAHAKRLLH 358
T+++I+ K+ + DRA + + G + + Y +I +AYE G+ A LL+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE--GMAKEALELLN 578
Query: 359 ELRQPNTIPRETA 371
EL + + +A
Sbjct: 579 ELCNKGLMKKSSA 591
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 195/425 (45%), Gaps = 10/425 (2%)
Query: 66 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
+ G + +L+ M D++ + LI +L KA I L+ SG VPD++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
YN MI+ + KA A +++ M V PD V+Y+T+L ++ K +A+ V M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 245
+ +C D+ T I+I+ + A +L MR G P VV+YN L+ +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
EAI M + NV+T+N +++ + A L+ +M +G P+ +T++ +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELR 361
I + G L RA + +K+ G + + + Y ++ + + + A +R++
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
P+ + T +T L + G++E+A + Q G + + +I+ ++ K I+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ--MLSL 479
+ ++MR+ PD+ + ++ + + + A + E + G + + V F ML L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGL 529
Query: 480 YGARK 484
+R+
Sbjct: 530 CKSRQ 534
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 241/489 (49%), Gaps = 32/489 (6%)
Query: 37 LAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLI 96
+A +F+ G Y +S LI+ +G+ G+ + AIS M++ + +LV Y+ +I
Sbjct: 251 IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
Query: 97 ELARKLS-DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGV 155
+ K ++ + F ++ +G+ PD + +N+++ V + L++ AR L +EM + +
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
+ D SY+TLL+ + + A + A+M ++ + + +ID + + +A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
LF MR +GI VSYNTLL +Y + EA+ + R M I+++VVTYN ++ YG
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
K ++++ + EM+ + PN +TYST+I + K G A +F++ +S+G+ D V
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA------------G 379
LY +I A + GLV A L+ E+ + PN + + I R+ G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Query: 380 RIEEATWVFRQAFDAGEVKDISVFGCM-IELFSRNKK--------YANVIEVFEKMRSAG 430
+ ++ + + I +FG + E +R K + ++EVF KM
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNML- 489
P+ + +LN+ + FE A L E++ +F ++V+ + L +++ L
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLMGQRENVWLQ 726
Query: 490 -ESLFERLD 497
+SLF++++
Sbjct: 727 AQSLFDKVN 735
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 172/304 (56%), Gaps = 1/304 (0%)
Query: 17 PSVFAYNVVLRNVLRAK-QWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
P++ YN V+ + +++ FDEM++ G+ PDR T+++L+ + G++++A +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 76 WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
+M R+ D+ Y+ L++ K A I +++ I+P++V+Y+T+I+ F
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
KA F EA L EMR G+ D VSY+TLL++Y + + EAL + EM V D+
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
T N ++ YG+ + ++F M++ + P++++Y+TL+ Y + L+ EA+ +FR
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKL 315
+ + +VV Y+ +I K+ A +L+ EM GI PN +TY++II +G++ +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 316 DRAA 319
DR+A
Sbjct: 601 DRSA 604
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 12/375 (3%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P +N +L R WE A LFDEM R I D ++Y+TL+ K G D A
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
L QM R+ ++V YS +I+ K + +A+++F ++ GI D V+YNT+++++ K
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+EA ++ EM G+K D V+Y+ LL Y + K+ E VF EM + +L T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+ +ID Y + + K+A +F + G+ VV Y+ L+ + L G A+ L M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
++ I NVVTYN++I +G+S +++ + N G P + S + A+ G +
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSA----DYSNGGSLP--FSSSALSALTETEG--N 628
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR-QPNTIPRETAITIL 375
R LF +L + E + + + + + R +H+L +PN + +
Sbjct: 629 RVIQLFGQLTT---ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685
Query: 376 ARAGRIEEATWVFRQ 390
+R E+A+ + +
Sbjct: 686 SRCNSFEDASMLLEE 700
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 202/428 (47%), Gaps = 9/428 (2%)
Query: 36 ELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ--QMEQDRVSGDLVLYS 93
E+ H L + D TY +I G D A+ + + + R + L S
Sbjct: 180 EMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS 237
Query: 94 NLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ 153
+I + + A IF + G + A++ +I+ +G++ L +EA + M+E
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 154 GVKPDTVSYSTLLNLYVENH-KFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
G++P+ V+Y+ +++ + +F + F EM D T N ++ V + + +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
A LF M I+ V SYNTLL + A + M K I NVV+Y+T+I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
+ K+ ++A NL EM+ GI + ++Y+T+++I+ K G+ + A + +++ S G++
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVF 388
D V Y ++ Y + G K++ E+++ PN + T I ++ G +EA +F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
R+ AG D+ ++ +I+ +N + + + ++M G P+ +++++G+
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 449 REFETADD 456
+ + D
Sbjct: 598 ATMDRSAD 605
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 31/366 (8%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
R VF+YN +L + + Q +LA + +M + I P+ +YST+I F K G FD A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
++ +M ++ D V Y+ L+ + K+ +A+ I + S GI D+V YN ++
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
+GK + E + + EM+ + V P+ ++YSTL++ Y + + EA+ +F E D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF-------- 245
+ + +ID + + A L M K GI P+VV+YN+++ +G +
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Query: 246 GEAIHLFR--LMQRKEIEQNVVTYNTMIKIYGK-SLEHEKATNL-----MQE-------- 289
G ++ L E E N V I+++G+ + E T MQE
Sbjct: 609 GGSLPFSSSALSALTETEGNRV-----IQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663
Query: 290 --MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
M I+PN +T+S I+ + + A+ML ++LR ++ V++ ++ E V
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENV 723
Query: 348 GLVAHA 353
L A +
Sbjct: 724 WLQAQS 729
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 5/270 (1%)
Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
MI G+ A R+F + G +V +++ L+ YG + L EAI +F M+
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 260 IEQNVVTYNTMIKIYGKS-LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
+ N+VTYN +I GK +E ++ EMQ G++P+ IT+++++A+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
LF ++ + +E D Y T++ A + G + A +L ++ PN + T I
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 375 LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
A+AGR +EA +F + G D + ++ ++++ + +++ +M S G D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 435 SHIIALVLNSYGKLREFETADDLYSEMQEE 464
+L YGK +++ +++EM+ E
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 223/459 (48%), Gaps = 4/459 (0%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
++A P+V N+++ + ++++ + A +F+EM + PD T+ +LI GK G
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A ++M + ++Y++LI+ I+ + + PDL NT
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
++ KA ++ R + EE++ + PD SYS L++ ++ E +F M E C
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
LD NI+ID + + A +L M+ G +P+VV+Y +++ + + EA
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
LF + K IE NVV Y+++I +GK ++A +++E+ +G+ PN T+++++
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
KA +++ A + FQ ++ + V Y +I +V A E+++ P+TI
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
T I+ LA+AG I EA +F + G V D + + MIE S + + +FE+
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
R G + ++L++ K E A + + ++E G
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 11/461 (2%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E Y P+V + ++R + + + A L DEM+ + D Y+ I FGK G
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A + ++E + + D V Y+++I + K + +A+ +F L+ + VP AYNTM
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I +G A F EA L+E R +G P ++Y+ +L + K EAL VF EM +
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 191 PLDLTTCNIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
P +L+T NI+ID+ G+LD A + L SM+K G+ P+V + N ++ +++ E
Sbjct: 375 P-NLSTYNILIDMLCRAGKLDTAFE---LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A +F M K + +T+ ++I GK + A + ++M + N+I Y+++I
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIP 367
+ G+ + +++ + + D L T + + G + + E++ +P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 368 RETAITI----LARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVF 423
+ +I L +AG E +F + G V D + +I+ F + K ++
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 424 EKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
E+M++ G+ P V++ K+ + A L+ E + +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 239/565 (42%), Gaps = 79/565 (13%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ R P +AYN ++ A +++ A+ L + R +G P Y+ ++TC K G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A+ ++M++D + +L Y+ LI++ + A + ++ +G+ P++ N M
Sbjct: 360 DEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLN----------------------- 167
++ K++ EA + EEM + PD +++ +L++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 168 -----LYVE------NHKFVE-ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
+Y NH E ++ +M NC DL N +D + +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
+F ++ P SY+ L+ +A E LF M+ + + YN +I +
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
K + KA L++EM+ +G EP +TY ++I K +LD A MLF++ +S +E++ V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQA 391
+Y ++I + +VG + A +L EL Q PN + + L +A I EA
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA------- 711
Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
+ F+ M+ P+ +++N K+R+F
Sbjct: 712 ----------------------------LVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 452 ETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLE--SLFERLDSDSNINKKELHH 509
A + EMQ++G S + M+S G K N+ E +LF+R ++ + ++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMIS--GLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 510 VVAGIYERANRLNDASRIMNRMNKR 534
+ NR DA + +R
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRR 826
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 209/456 (45%), Gaps = 5/456 (1%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
++ P+ AY ++ ++ LF +M++ G P + ++TLI F KEG DSA
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
+S L +M+ + D+VLY+ I+ K+ A F ++++G+ PD V Y +MI V
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
KA EA + E + + P T +Y+T++ Y KF EA S+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
+ N ++ ++ +A ++F M+K P++ +YN L+ + A A L
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
MQ+ + NV T N M+ KS + ++A + +EM + P+ IT+ ++I GK G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPR----E 369
++D A +++K+ S + ++Y ++I + G ++ ++ N P
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
T + + +AG E+ +F + V D + +I + E+F M+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
G D+ +V++ + K + A L EM+ +G
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 239/555 (43%), Gaps = 56/555 (10%)
Query: 1 RSVAILDWINEE---ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 57
R+ LD I E A + PSV ++ ++A + + + MR+ P Y
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 58 STLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKS 117
+TLI F D ++ QQM++ + L++ LI K A+S+ +KS
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 118 SGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVE 177
S + D+V YN I+ FGK A E+ G+KPD V+Y++++ + + ++ E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 178 ALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLR 237
A+ +F + E N R++ P +YNT++
Sbjct: 292 AVEMFEHL-EKN-------------------------------RRV---PCTYAYNTMIM 316
Query: 238 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEP 297
YG A F EA L + K +V+ YN ++ K + ++A + +EM+ + P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAP 375
Query: 298 NAITYSTIIAIWGKAGKLDRA---------AMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
N TY+ +I + +AGKLD A A LF +R+ + +D + +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE----- 430
Query: 349 LVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
A + + +++ P+ I + I L + GR+++A V+ + D+ + V+ +I+
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 409 LFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVF 468
F + + + ++++ M + PD ++ ++ K E E ++ E++ V
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV- 549
Query: 469 SDQVHFQMLSLYGARKDF-NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRI 527
D + +L + F N LF + + +++V + + ++N A ++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 528 MNRMNKRRTFNSSLV 542
+ M K + F ++V
Sbjct: 610 LEEM-KTKGFEPTVV 623
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 160/358 (44%), Gaps = 37/358 (10%)
Query: 7 DWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI----- 61
D IN+ SP + N + + +A + E +F+E++ R PD +YS LI
Sbjct: 507 DMINQNC--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 62 -----------------TC-------------FGKEGMFDSAISWLQQMEQDRVSGDLVL 91
C F K G + A L++M+ +V
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 92 YSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMR 151
Y ++I+ K+ +A +F KS I ++V Y+++I+ FGK EA L++EE+
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAK 211
++G+ P+ ++++LL+ V+ + EAL F M E+ C + T I+I+ ++
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 212 DADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 271
A + M+K G+ PS +SY T++ +A EA LF + + YN MI
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 272 KIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
+ A +L +E + RG+ + T ++ K L++AA++ LR +G
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 44/417 (10%)
Query: 56 TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIEL------ARKLSDYSKAI 109
+Y++L+ + FD+ L +M V+G + IE+ A KL + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMS---VAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156
Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
+ + K P AY T+I F L ++M+E G +P ++TL+ +
Sbjct: 157 QMMRKFK---FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
+ + ALS+ EM + D+ N+ ID +G++ A + F + G+ P
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
V+Y +++ V +A EA+ +F +++ YNTMI YG + + ++A +L++
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
+ +G P+ I Y+ I+ K GK+D A +F++++
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA------------------- 374
Query: 350 VAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIEL 409
PN I +L RAG+++ A + AG ++ M++
Sbjct: 375 -------------PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 410 FSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGC 466
+++K +FE+M PD +++ GK+ + A +Y +M + C
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 43/306 (14%)
Query: 203 VYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLL-------------RVYGEAELF 245
V G L KD +R W R+ + SYN+LL ++ GE +
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 246 G----------------------EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
G E + ++M++ + Y T+I + +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
L Q+MQ G EP ++T+I + K G++D A L +++SS ++ D VLY I +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 344 YERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKD 399
+ +VG V A + HE+ +P+ + + I +L +A R++EA +F V
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 400 ISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYS 459
+ MI + K+ + E+ R+ G P +L K+ + + A ++
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 460 EMQEEG 465
EM+++
Sbjct: 368 EMKKDA 373
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 9/444 (2%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA+ D + E +P V +N ++ + + A L ++M +G+ D TY T++
Sbjct: 210 AVALFDQM-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G SA++ L +ME+ + D+V+YS +I+ K +S A +FS + GI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P++ YN MI+ F + +A+ L+ +M E+ + PD ++++ L++ V+ K EA +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
EM D T N MI + + + DA +F M P VV++NT++ VY
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ E + L R + R+ + N TYNT+I + + A +L QEM + G+ P+ IT
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
+ ++ + + KL+ A LF+ ++ S +++D V Y +I + V A L L
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+P+ I+ I +A +F + D G D S + +I + +
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 418 NVIEVFEKMRSAGYFPDSHIIALV 441
IE+ +MRS G+ D+ I +V
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKMV 648
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 210/432 (48%), Gaps = 8/432 (1%)
Query: 38 AHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIE 97
A LFD+M + G+ P T++TLI EG A + + +M + D+V Y ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 98 LARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
K+ D A+++ S+++ + I PD+V Y+ +I+ K +A+ L EM E+G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 158 DTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLF 217
+ +Y+ +++ + ++ +A + +M E D+ T N +I + +A++L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 218 WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 277
M I P V+YN+++ + + F +A H+F LM + VVT+NT+I +Y ++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRA 445
Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
++ L++E+ RG+ N TY+T+I + + L+ A LFQ++ S GV D +
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 338 QTMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFD 393
++ + + A L ++ +T+ I + + +++EA +F
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
G D+ + MI F ++ +F KM+ G+ PD+ ++ K E +
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 454 ADDLYSEMQEEG 465
+ +L SEM+ G
Sbjct: 626 SIELISEMRSNG 637
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 232/504 (46%), Gaps = 29/504 (5%)
Query: 3 VAILDWINEEARYSP-SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
VAI + E R P +++++N++++ + + F ++ + G PD T++TL+
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
G+ +DR+S L L+ ++E + + +A+++F ++ G+
Sbjct: 184 -----HGL----------CLEDRISEALALFGYMVE-----TGFLEAVALFDQMVEIGLT 223
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P ++ +NT+IN EA L+ +M +G+ D V+Y T++N + AL++
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
++M E + D+ + +ID + DA LF M + GI P+V +YN ++ +
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
+ +A L R M +EI +V+T+N +I K + +A L EM +R I P+ +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+++I + K + D A +F + S D V + T+I Y R V +LL E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 362 Q----PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
+ NT T I + A +F++ G D ++ F N+K
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
+E+FE ++ + D+ ++++ K + + A DL+ + G Q + M+
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 478 SLYGARKDFNMLESLFERLDSDSN 501
S + + + LF ++ + +
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGH 603
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 196/427 (45%), Gaps = 21/427 (4%)
Query: 57 YSTLITCFGKEGMF------DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAIS 110
+ T + C G+F D AIS ++ME R+ ++ ++ LI+ S ++S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 111 IFSRLKSSGIVPDLVAYNTMIN-------------VFGKA--KLFKEARLLIEEMREQGV 155
F +L G PD+V +NT+++ +FG F EA L ++M E G+
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222
Query: 156 KPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADR 215
P ++++TL+N + +EA ++ +M +D+ T +++ ++ K A
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 216 LFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
L M + I P VV Y+ ++ + +A +LF M K I NV TYN MI +
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
A L+++M R I P+ +T++ +I+ K GKL A L ++ + D V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
Y +MI + + AK + + P+ + T I + RA R++E + R+ G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
V + + + +I F ++F++M S G PD+ ++L + + + E A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 456 DLYSEMQ 462
+L+ +Q
Sbjct: 523 ELFEVIQ 529
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 5/307 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E +P V +N ++ ++ + A L DEM R I PD TY+++I F K FD
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A M S D+V ++ +I++ + + + + + G+V + YNT+I
Sbjct: 419 DAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ F + A+ L +EM GV PDT++ + LL + EN K EAL +F +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
LD NI+I + +A LF S+ G++P V +YN ++ + +A L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F M+ E + TYNT+I+ K+ E +K+ L+ EM++ G +A T ++A
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLIT 653
Query: 312 AGKLDRA 318
G+LD++
Sbjct: 654 DGRLDKS 660
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 173/382 (45%), Gaps = 34/382 (8%)
Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
V + ++ ++V ++ A+S++ +M PL++ + NI+I + + F
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
+ K+G P VV++NTLL + EA+ LF M + V ++ M++I
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI------ 220
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
G+ P IT++T+I G++ AA L K+ G+ ID V Y T
Sbjct: 221 --------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 340 MIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQAFDAG 395
++ ++G A LL ++ + P+ + I L + G +A ++F + + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII-ALVLNSYGKLREFETA 454
++ + CMI+ F ++++ + M PD AL+ S + + FE A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE-A 385
Query: 455 DDLYSEMQEEGCVFSDQVHFQMLSLYGARKD--FNMLESLFERLDSDSNINKKELHHVVA 512
+ L EM C+F D V + + +YG K F+ + +F+ + S + + +
Sbjct: 386 EKLCDEMLHR-CIFPDTVTYNSM-IYGFCKHNRFDDAKHMFDLMASPDVVT----FNTII 439
Query: 513 GIYERANRLNDASRIMNRMNKR 534
+Y RA R+++ +++ +++R
Sbjct: 440 DVYCRAKRVDEGMQLLREISRR 461
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 251/530 (47%), Gaps = 14/530 (2%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
++ S+ A N ++ +++R ELA G++ E+ + G+ + YT + ++ K+G +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
++L Q+++ V D+V Y+ LI +A + + + G P + YNT+IN
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K ++ A+ + EM G+ PD+ +Y +LL + VE VF++M + DL
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
+ M+ ++ + A F S+++ G+ P V Y L++ Y + A++L
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M ++ +VVTYNT++ K +A L EM R + P++ T + +I K G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 374
L A LFQK++ + +D V Y T++ + +VG + AK + ++ +P + +I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 375 LARA----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
L A G + EA V+ + + + MI+ + R+ ++ EKM S G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 431 YFPDSHIIALVLNSYGKLRE--FETADDLYSEMQEE-GCVFSDQVHFQMLSLYGARKDFN 487
+ PD I+ YG +RE A L +M+EE G + D + + L+G +
Sbjct: 616 FVPDC--ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI-LHGFCRQNQ 672
Query: 488 MLES---LFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
M E+ L + ++ N ++ ++ G + N L +A RI + M +R
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN-LTEAFRIHDEMLQR 721
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 202/426 (47%), Gaps = 6/426 (1%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+SP V+ YN V+ + + ++E A +F EM + G++PD TY +L+ K+G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
M V DLV +S+++ L + + KA+ F+ +K +G++PD V Y +I +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
+ + A L EM +QG D V+Y+T+L+ + EA +F EM E D
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T I+ID + +L ++A LF M++ I VV+YNTLL +G+ A ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M KEI ++Y+ ++ +A + EM ++ I+P + +++I + ++G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ------PNTIPR 368
+K+ S G D + Y T+I + R ++ A L+ ++ + P+
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 369 ETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRS 428
+ + R +++EA V R+ + G D S + CMI F + ++M
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 429 AGYFPD 434
G+ PD
Sbjct: 721 RGFSPD 726
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 218/468 (46%), Gaps = 11/468 (2%)
Query: 6 LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 65
L + E+ Y P + YN ++ E A L + M +G +P YTY+T+I
Sbjct: 258 LSQVQEKGVY-PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 66 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
K G ++ A +M + +S D Y +L+ A K D + +FS ++S +VPDLV
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
+++M+++F ++ +A + ++E G+ PD V Y+ L+ Y A+++ EM
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 186 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL- 244
+ C +D+ T N ++ + M +AD+LF M + + P SY + + G +L
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD--SYTLTILIDGHCKLG 494
Query: 245 -FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYS 303
A+ LF+ M+ K I +VVTYNT++ +GK + + A + +M ++ I P I+YS
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 304 TIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ- 362
++ G L A ++ ++ S ++ ++ +MI Y R G + + L ++
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 363 ---PNTIPRETAITILARAGRIEEATWVFRQAFD--AGEVKDISVFGCMIELFSRNKKYA 417
P+ I T I R + +A + ++ + G V D+ + ++ F R +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
V KM G PD ++N + A ++ EM + G
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 9/359 (2%)
Query: 110 SIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLY 169
S FS S+ V DL +I + +A+ +EA +R +G + + L+
Sbjct: 156 STFSNCGSNDSVFDL-----LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 170 VENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSV 229
V A V+ E++ +++ T NIM++ + + +++ G+ P +
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
V+YNTL+ Y L EA L M K V TYNT+I K ++E+A + E
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
M G+ P++ TY +++ K G + +F +RS V D V + +M+ + R G
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 350 VAHAKRLLHELRQPNTIPRETAITIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
+ A + +++ IP TIL R G I A + + G D+ +
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEE 464
++ + K ++F +M FPDS+ + ++++ + KL + A +L+ +M+E+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 177/367 (48%), Gaps = 7/367 (1%)
Query: 99 ARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
ARKL + +A F+ L+S G + A N +I + + A + +E+ GV +
Sbjct: 178 ARKLREAHEA---FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFW 218
+ + ++N ++ K + + +++ E D+ T N +I Y + ++A L
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 219 SMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
+M G P V +YNT++ + + A +F M R + + TY +++ K
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
+ + + +M++R + P+ + +S++++++ ++G LD+A M F ++ +G+ D V+Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 339 TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
+I Y R G+++ A L +E+ Q + + T + L + + EA +F + +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
D +I+ + N +E+F+KM+ D +L+ +GK+ + +TA
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 455 DDLYSEM 461
+++++M
Sbjct: 535 KEIWADM 541
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ P VF YN +L R Q + A + +M +RG+ PDR TY+ +I F +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 71 DSAISWLQQMEQDRVSGD 88
A +M Q S D
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 212/420 (50%), Gaps = 14/420 (3%)
Query: 19 VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
++ +N+V+ Q LA + +M + G PDR T +L+ F + A+S +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 79 QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
+M + D+V Y+ +I+ K + A F ++ GI P++V Y ++N +
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
+ +A L+ +M ++ + P+ ++YS LL+ +V+N K +EA +F EM ++ D+ T +
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 258
+I+ D +A+++F M G VVSYNTL+ + +A+ + + LFR M ++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 259 EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRA 318
+ N VTYNT+I+ + ++ + +KA +M GI P+ TY+ ++ G+L++A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 319 AMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITI 374
++F+ ++ +++D V Y T+I + G V A L L +P+ + T ++
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 375 LARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
L G + E ++ + G +K D ++ I L + E+ +KM S GY P
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA---------ELIKKMLSCGYAP 530
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 175/359 (48%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P ++ R + A L D+M + G PD Y+ +I K + A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ +++E+ + ++V Y+ L+ S +S A + S + I P+++ Y+ +++ F
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K EA+ L EEM + PD V+YS+L+N + + EA +F M C D+
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
+ N +I+ + + +D +LF M + G+ + V+YNTL++ + +A +A F
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M I ++ TYN ++ + E EKA + ++MQ R ++ + +TY+T+I K GK
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAIT 373
++ A LF L G++ D V Y TM+ GL+ + L +++Q + + ++
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 162/319 (50%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E Y P + AYN ++ ++ + K+ A F E+ ++GI P+ TY+ L+ +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A L M + +++ +++ YS L++ K +A +F + I PD+V Y+++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N EA + + M +G D VSY+TL+N + + + + + +F EM++
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ T N +I + Q A F M GI P + +YN LL + +A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F MQ++E++ ++VTY T+I+ K+ + E+A +L + +G++P+ +TY+T+++
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 312 AGKLDRAAMLFQKLRSSGV 330
G L L+ K++ G+
Sbjct: 483 KGLLHEVEALYTKMKQEGL 501
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 4/431 (0%)
Query: 70 FDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNT 129
+ AI M + R +V ++ L+ KL Y IS+ +++ GI DL +N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
+IN F A ++ +M + G +PD V+ +L+N + ++ +A+S+ +M E+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
D+ N +ID + DA F + + GI P+VV+Y L+ + + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
L M +K+I NV+TY+ ++ + K+ + +A L +EM I+P+ +TYS++I
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
++D A +F + S G D V Y T+I + + V +L E+ Q NT
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
+ T I +AG +++A F Q G DI + ++ N + + +FE
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKD 485
M+ D V+ K + E A L+ + +G + M+S +
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 486 FNMLESLFERL 496
+ +E+L+ ++
Sbjct: 486 LHEVEALYTKM 496
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 201/453 (44%), Gaps = 15/453 (3%)
Query: 30 LRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDL 89
LR + A LF +M + P ++ L++ K +D IS ++ME + DL
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 90 VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEE 149
++ +I S A+SI ++ G PD V +++N F + +A L+++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 150 MREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDM 209
M E G KPD V+Y+ +++ + + +A F E+ ++ T +++
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 210 AKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 269
DA RL M K I P+V++Y+ LL + + EA LF M R I+ ++VTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 270 MIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSG 329
+I ++A + M ++G + ++Y+T+I + KA +++ LF+++ G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 330 VEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEAT 385
+ + V Y T+I + + G V A+ ++ P+ + L G +E+A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 386 WVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV---L 442
+F DI + +I + K +F + G PD + L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 443 NSYGKLREFETADDLYSEMQEEG-----CVFSD 470
+ G L E E LY++M++EG C SD
Sbjct: 481 CTKGLLHEVEA---LYTKMKQEGLMKNDCTLSD 510
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 45/319 (14%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
+ + +P+V Y+ +L ++ + A LF+EM + I PD TYS+LI
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN--------- 303
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
L L+ + E A +F + S G + D+V+YNT+I
Sbjct: 304 ----------------GLCLHDRIDE----------ANQMFDLMVSKGCLADVVSYNTLI 337
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N F KAK ++ L EM ++G+ +TV+Y+TL+ + + +A F++M+
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ T NI++ + A +F M+K +D +V+Y T++R + EA L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 252 FRLMQRKEIEQNVVTYNTMIK-IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
F + K ++ ++VTY TM+ + K L HE L +M+ G+ N T S
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGLMKNDCTLSD------ 510
Query: 311 KAGKLDRAAMLFQKLRSSG 329
G + +A L +K+ S G
Sbjct: 511 --GDITLSAELIKKMLSCG 527
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 228/495 (46%), Gaps = 45/495 (9%)
Query: 13 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
+R P+V ++ + + + KQ++L L +M +GIA + YT S +I CF +
Sbjct: 82 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
A S + ++ + + + +S LI S+A+ + R+ G PDL+ NT++N
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+ EA LLI++M E G +P+ V+Y +LN+ ++ + A+ + +M E N L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 193 DLTTCNIMID---VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
D +I+ID +G LD +A LF M GI ++++YN L+ + A + +
Sbjct: 262 DAVKYSIIIDGLCKHGSLD---NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
L R M +++I NVVT++ +I + K + +A L +EM +RGI P+ ITY+++I +
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 310 GKAGKLDRAAM-----------------------------------LFQKLRSSGVEIDP 334
K LD+A LF+K+ GV D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 335 VLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATWVFRQ 390
V Y T+I + +G + AK L E+ PN + + + L G E+A +F +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 391 AFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLRE 450
+ DI ++ +I K + ++F + G P +++ K
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 451 FETADDLYSEMQEEG 465
A+ L+ +M+E+G
Sbjct: 559 LSEAELLFRKMEEDG 573
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 213/445 (47%), Gaps = 6/445 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P + N ++ + + + A L D+M + G P+ TY ++ K G
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+ L++ME+ + D V YS +I+ K A ++F+ ++ GI +++ YN +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
F A + + L+ +M ++ + P+ V++S L++ +V+ K EA + EM
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D T +ID + + + A+++ M G DP++ ++N L+ Y +A + + L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
FR M + + + VTYNT+I+ + + + A L QEM +R + PN +TY ++
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
G+ ++A +F+K+ S +E+D +Y +I V A L L +P
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
I L + G + EA +FR+ + G D + +I + +++ E+++
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 428 SAGYFPDSHIIALVLN--SYGKLRE 450
G+ D+ I +V++ S G+L++
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGRLKK 630
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 173/355 (48%), Gaps = 6/355 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE Y++++ + + + A LF+EM +GI + TY+ LI F G +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D L+ M + +++ ++V +S LI+ K +A + + GI PD + Y ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I+ F K +A +++ M +G P+ +++ L+N Y + ++ + L +F +M+
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
D T N +I + +L A LF M + P++V+Y LL GE+E +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE---K 491
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A+ +F +++ ++E ++ YN +I + + + A +L + +G++P TY+ +I
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
K G L A +LF+K+ G D Y +I A+ G + +L+ EL++
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+++ + YN+++ + A + + A LF + +G+ P TY+ +I K+G
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A ++ME+D + D Y+ LI D +K++ + LK G D +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 131 INVFGKAKLFK 141
I++ +L K
Sbjct: 620 IDMLSDGRLKK 630
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 191/347 (55%), Gaps = 1/347 (0%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+VA++D + E Y P + ++ + + A L D M QRG PD TY ++
Sbjct: 167 AVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
K G D A++ L +ME ++ ++V+YS +I+ K A+++F+ +++ G+
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 122 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 181
P+++ Y+++I+ + +A L+ +M E+ + P+ V++S L++ +V+ K V+A +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
+ EM + + ++ T + +I+ + LD +A ++ M + P+VV+YNTL+ + +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
A+ + + LFR M ++ + N VTY T+I + ++ + + A + ++M + G+ PN +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVG 348
Y+ ++ K GKL +A ++F+ L+ S +E D Y MI + G
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 190/370 (51%), Gaps = 4/370 (1%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y P + N +L + A L D+M + G PD T++TLI A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+ + +M Q DLV Y ++ K D A+++ ++++++ I ++V Y+T+I+
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
K + +A L EM +GV+P+ ++YS+L++ ++ +A + ++M E +L
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T + +ID + + A++L+ M K IDP++ +Y++L+ + + GEA + L
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M RK+ NVVTYNT+I + K+ +K L +EM RG+ N +TY+T+I + +A
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRET 370
D A M+F+++ S GV + + Y ++ + G +A A + L+ +P+
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 371 AITILARAGR 380
I + +AG+
Sbjct: 504 MIEGMCKAGK 513
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 223/450 (49%), Gaps = 10/450 (2%)
Query: 20 FAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
+ Y VLR L + + A GLF M Q P +S L++ K FD IS+ ++
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 80 MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
ME +S +L Y+ LI + S S A+++ ++ G PD+V N+++N F
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
+A L+++M E G KPDTV+++TL++ ++K EA+++ M + C DL T
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 200 MIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+++ G D+A + L M I+ +VV Y+T++ + +A++LF M+
Sbjct: 224 VVNGLCKRGDTDLALN---LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
K + NV+TY+++I A+ L+ +M R I PN +T+S +I + K GKL
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAI 372
+A L++++ ++ + Y ++I + + + AK++L + + PN + T I
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYF 432
+A R+++ +FR+ G V + + +I F + + N VF++M S G
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 433 PDSHIIALVLNSYGKLREFETADDLYSEMQ 462
P+ ++L+ K + A ++ +Q
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 201/427 (47%), Gaps = 4/427 (0%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ ++ +L + + +++L ++M GI+ + YTY+ LI CF +
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ L +M + D+V ++L+ + S A+++ ++ G PD V + T+I
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ EA LI+ M ++G +PD V+Y ++N + AL++ +M
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
++ + +ID + DA LF M G+ P+V++Y++L+ + +A L
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M ++I N+VT++ +I + K + KA L +EM R I+PN TYS++I +
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIP 367
+L A + + + + V Y T+I + + V L E+ Q NT+
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
T I +A + A VF+Q G +I + +++ +N K A + VFE ++
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 428 SAGYFPD 434
+ PD
Sbjct: 491 RSTMEPD 497
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 252/558 (45%), Gaps = 53/558 (9%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGK----- 66
E++ SP+VF YN+++R A ++A LFD+M +G P+ TY+TLI + K
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 67 -----------EGMFDSAISW-------------------LQQMEQDRVSGDLVLYSNLI 96
+G+ + IS+ L +M + S D V Y+ LI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 97 ELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
+ K ++ +A+ + + + G+ P ++ Y ++I+ KA A +++MR +G+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
P+ +Y+TL++ + + EA V EMN+ + T N +I+ + +DA +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 217 FWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 276
M++ G+ P VVSY+T+L + + EA+ + R M K I+ + +TY+++I+ + +
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 277 SLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVL 336
++A +L +EM G+ P+ TY+ +I + G L++A L ++ GV D V
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 337 YQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE-TAITILARAGRIEEATWVFRQAFDAG 395
Y +I + AKRLL +L ++P + T T++ IE + V
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV-------S 610
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETAD 455
+K + G M E +VFE M + PD ++++ + + + A
Sbjct: 611 LIKGFCMKGMMTE----------ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 456 DLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIY 515
LY EM + G + ++ N L S+ + +++ E V+ I
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720
Query: 516 ERANRLNDASRIMNRMNK 533
R ++ ++ M K
Sbjct: 721 HREGNMDVVLDVLAEMAK 738
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 189/417 (45%), Gaps = 41/417 (9%)
Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL-FKEARLLIEEMREQGVKPDT 159
+LS KA+SI ++ G +P +++YN +++ ++K A + +EM E V P+
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV 205
Query: 160 VSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWS 219
+Y+ L+ + AL++F +M C ++ T N +ID Y +L D +L S
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
M G++P+++SYN ++ E + M R+ + VTYNT+IK Y K
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
+A + EM G+ P+ ITY+++I KAG ++RA ++R G+ + Y T
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 340 MIVAYERVGLVAHAKRLLHELR-------------------------------------- 361
++ + + G + A R+L E+
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 362 -QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVI 420
P+ + T ++ R+ ++EA V R+ + G D + +I+ F ++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 421 EVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
+++E+M G PD ++N+Y + E A L++EM E+G V D V + +L
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-VLPDVVTYSVL 561
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 26/320 (8%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
++A+L+ + E+ SP V +Y+ VL R+ + A + EM ++GI PD TYS+LI
Sbjct: 434 AIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 62 TCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIV 121
F ++ A ++M + + D Y+ LI D KA+ + + + G++
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 122 PDLVAYNTMINVFGKAKLFKEA-RLLIEEMREQGVKPDTVSYSTLL----NL-------- 168
PD+V Y+ +IN K +EA RLL++ E+ V P V+Y TL+ N+
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSL 611
Query: 169 ---YVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGI 225
+ EA VF M N D T NIMI + + + A L+ M K G
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 226 DPSVVSYNTLLRVYGEA----ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
V+ L++ + EL +H+ R + E EQ V +++I + +
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV----LVEINHREGNMD 727
Query: 282 KATNLMQEMQNRGIEPNAIT 301
+++ EM G PN I+
Sbjct: 728 VVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 209/458 (45%), Gaps = 41/458 (8%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIA-PDRYTYSTLITCFGKEGMFDS 72
+ P+ YN V+ +++ Q E H ++ EM G PD TYS LI+ + K G DS
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
AI +M+ + + +Y+ L+ + K+ KA+ +F +K +G P + Y +I
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
GKA EA ++M G+ PD V + L+N+ + + E +VF+EM C
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC-- 369
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL-FGEAIHL 251
P+VVSYNT+++ E++ E
Sbjct: 370 ---------------------------------TPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F M+ + + TY+ +I Y K+ EKA L++EM +G P Y ++I GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
A + + A LF++L+ + + +Y MI + + G ++ A L +E++ + P A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 372 ----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
++ + +AG I EA + R+ + G DI+ ++ F+R IE+FE ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
+G PD +L + FE A + EM+++G
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 21/503 (4%)
Query: 46 RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSD 104
++R D TY TLI C + ++ +Q++ ++ VS + S L++ +
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQG-VKPDTVSYS 163
SKA+S+F + K P YN++I + + ++ + EM +G PDT++YS
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 164 TLLNLYVENHKFVEALSVFAEMNEVNC--PLDLTTCNIMIDVYGQLDMAKDADRLFWSMR 221
L++ Y + + A+ +F EM + NC P + ++ +Y ++ + A LF M+
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKD-NCMQPTE-KIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 222 KMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
+ G P+V +Y L++ G+A EA ++ M R + +VV N ++ I GK E
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 282 KATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
+ TN+ EM P ++Y+T+I A++ + + F K+++ V Y +
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 341 IVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFDAGE 396
I Y + V A LL E+ + P A I L +A R E A +F++ +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
V+ MI+ F + K + +++F +M++ G PD + +++ K A+
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYG----ARKDFNMLESLFERLDSDSNINKKEL-HHVV 511
L +M+E GC H +L+ + R+ M E++ S I + ++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-----KHSGIKPDGVTYNTL 590
Query: 512 AGIYERANRLNDASRIMNRMNKR 534
G + A +A+R+M M +
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDK 613
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 12/275 (4%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAH-----GLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
R +P+V +YN V++ + +K AH FD+M+ ++P +TYS LI + K
Sbjct: 368 RCTPTVVSYNTVIKALFESK----AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSS-GIVPDLVAY 127
+ A+ L++M++ Y +LI K Y A +F LK + G V V Y
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-Y 482
Query: 128 NTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNE 187
MI FGK EA L EM+ QG PD +Y+ L++ V+ EA S+ +M E
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 188 VNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGE 247
C D+ + NI+++ + + + + A +F +++ GI P V+YNTLL + A +F E
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEK 282
A + R M+ K E + +TY++++ G +++HEK
Sbjct: 603 AARMMREMKDKGFEYDAITYSSILDAVG-NVDHEK 636
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 38/343 (11%)
Query: 6 LDWINEEAR--YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITC 63
LD E R SP+V+ Y +++ + +A + + A+G + +M + G+ PD + L+
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 64 FGKEG------------------------------MFDSAI------SWLQQMEQDRVSG 87
GK G +F+S SW +M+ D VS
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 88 DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
YS LI+ K + KA+ + + G P AY ++IN GKAK ++ A L
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 148 EEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQL 207
+E++E + Y+ ++ + + K EA+ +F EM D+ N ++ +
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 208 DMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTY 267
M +A+ L M + G + S+N +L + + AI +F ++ I+ + VTY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 268 NTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
NT++ + + E+A +M+EM+++G E +AITYS+I+ G
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
+++ +L+ ++E+ + P AY ++ + +AK++E A+ LF E+++ Y+ +
Sbjct: 427 KALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I FGK G A+ +M+ D+ Y+ L+ K ++A S+ +++ +G
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
D+ ++N ++N F + + + A + E ++ G+KPD V+Y+TLL + F EA
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
+ EM + D T + ++D G +D KD
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE + ++N++L R A +F+ ++ GI PD TY+TL+ CF GMF
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIF 112
+ A +++M+ D + YS++++ + +S F
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 199/405 (49%), Gaps = 9/405 (2%)
Query: 6 LDWINEEAR---YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
L++I E + + P + +N ++ + +A + A + D M Q G PD YTY+++I+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 63 CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
K G A+ L QM S + V Y+ LI K + +A + L S GI+P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVF 182
D+ +N++I + + A L EEMR +G +PD +Y+ L++ K EAL++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 183 AEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEA 242
+M C + T N +ID + + + ++A+ +F M G+ + V+YNTL+ ++
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 243 ELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITY 302
+A L M + + + TYN+++ + + + +KA +++Q M + G EP+ +TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 303 STIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
T+I+ KAG+++ A+ L + ++ G+ + P Y +I R A L E+ +
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 363 PNTIPRET-AITILAR-----AGRIEEATWVFRQAFDAGEVKDIS 401
N P + + I+ R G I EA + + G V + S
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 192/392 (48%), Gaps = 15/392 (3%)
Query: 21 AYNVVLRNVLRAKQWELAHGLFDEM-RQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQ 79
+ NV++ + + E A EM Q G PD+YT++TL+ K G AI +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 80 MEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKL 139
M Q+ D+ Y+++I KL + +A+ + ++ + P+ V YNT+I+ K
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLN--LYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
+EA L + +G+ PD ++++L+ NH+ A+ +F EM C D T
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTY 438
Query: 198 NIMIDVY---GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
N++ID G+LD +A + M G SV++YNTL+ + +A EA +F
Sbjct: 439 NMLIDSLCSKGKLD---EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
M+ + +N VTYNT+I KS E A LM +M G +P+ TY++++ + + G
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH--ELRQPNTIPR--ET 370
+ +AA + Q + S+G E D V Y T+I + G V A +LL +++ N P
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISV 402
I L R + EA +FR+ + E +V
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 206/468 (44%), Gaps = 5/468 (1%)
Query: 3 VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
++++DW+ +E P YN +L ++ +L +M GI PD T++ LI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 63 CFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVP 122
+ AI L+ M + D ++ +++ + D A+ I ++ G
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 123 DLVAYNTMINVFGKAKLFKEARLLIEEMREQ-GVKPDTVSYSTLLNLYVENHKFVEALSV 181
V+ N +++ F K ++A I+EM Q G PD +++TL+N + A+ +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 182 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 241
M + D+ T N +I +L K+A + M P+ V+YNTL+ +
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 242 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 301
EA L R++ K I +V T+N++I+ + H A L +EM+++G EP+ T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 302 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 361
Y+ +I GKLD A + +++ SG + Y T+I + + A+ + E+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 362 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
N++ T I L ++ R+E+A + Q G+ D + ++ F R
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
++ + M S G PD +++ K E A L +Q +G
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 212/494 (42%), Gaps = 43/494 (8%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAH-GLFD-EMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
+S ++ + +V L + LR++ + A LF+ ++ +P+ Y ++ G+ G FD
Sbjct: 42 HSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDD 101
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIE-----------------------LARKLSDYSKAI 109
L+ M+ R + LIE L Y++ +
Sbjct: 102 MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML 161
Query: 110 SIF-------------SRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVK 156
++ +++ GI PD+ +N +I +A + A L++E+M G+
Sbjct: 162 NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221
Query: 157 PDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRL 216
PD +++T++ Y+E AL + +M E C + N+++ + + +DA
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 217 FWSMRKM-GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 275
M G P ++NTL+ +A AI + +M ++ + +V TYN++I
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 276 KSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPV 335
K E ++A ++ +M R PN +TY+T+I+ K +++ A L + L S G+ D
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 336 LYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQA 391
+ ++I A L E+R P E I L G+++EA + +Q
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 392 FDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREF 451
+G + + + +I+ F + K E+F++M G +S +++ K R
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 452 ETADDLYSEMQEEG 465
E A L +M EG
Sbjct: 522 EDAAQLMDQMIMEG 535
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 212/461 (45%), Gaps = 15/461 (3%)
Query: 95 LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQ- 153
L+ L R S + I +KSS + +I + + +L E +++ M ++
Sbjct: 90 LLRLGRSGS-FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF 148
Query: 154 GVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDA 213
G+KPDT Y+ +LNL V+ + A+M+ D++T N++I + + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 214 DRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 273
+ M G+ P ++ T+++ Y E A+ + M + V+ N ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 274 YGKSLEHEKATNLMQEMQNR-GIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
+ K E A N +QEM N+ G P+ T++T++ KAG + A + + G +
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVF 388
D Y ++I ++G V A +L ++ PNT+ T I+ L + ++EEAT +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 389 RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKL 448
R G + D+ F +I+ + + +E+FE+MRS G PD ++++S
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 449 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDS-NINKKEL 507
+ + A ++ +M+ GC S + ++ + E +F+ ++ + N
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 508 HHVVAGIYERANRLNDASRIMNRM------NKRRTFNSSLV 542
+ ++ G+ ++ R+ DA+++M++M + T+NS L
Sbjct: 509 NTLIDGLC-KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 221/452 (48%), Gaps = 4/452 (0%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
+V +YN+V+ V + + + AH L M +G PD +YST++ + + G D +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
+ M++ + + +Y ++I L ++ ++A FS + GI+PD V Y T+I+ F K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
+ A EM + + PD ++Y+ +++ + + VEA +F EM D T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQR 257
+I+ Y + KDA R+ M + G P+VV+Y TL+ + A L M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 258 KEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDR 317
++ N+ TYN+++ KS E+A L+ E + G+ + +TY+T++ + K+G++D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 318 AAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILAR 377
A + +++ G++ V + ++ + G++ ++LL+ + P T L +
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 378 A----GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFP 433
++ AT +++ G D + +++ + + +F++M+ G+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 434 DSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
++++ + K ++F A +++ +M+ EG
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 214/453 (47%), Gaps = 4/453 (0%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
Y+P V +Y+ V+ R + + L + M+++G+ P+ Y Y ++I + A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
+M + + D V+Y+ LI+ K D A F + S I PD++ Y +I+ F
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 135 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 194
+ EA L EM +G++PD+V+++ L+N Y + +A V M + C ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 195 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 254
T +ID + A+ L M K+G+ P++ +YN+++ ++ EA+ L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 255 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 314
+ + + VTY T++ Y KS E +KA +++EM +G++P +T++ ++ + G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 315 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE-RVGLVAHA---KRLLHELRQPNTIPRET 370
L+ L + + G+ + + +++ Y R L A K + P+ E
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
+ +A ++EA ++F++ G +S + +I+ F + KK+ EVF++MR G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
D I ++ K + +T D E+ E
Sbjct: 697 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 4/471 (0%)
Query: 41 LFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELAR 100
+F E + G+ + +Y+ +I + G A L ME + D++ YS ++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 101 KLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTV 160
+ + K + +K G+ P+ Y ++I + + EA EM QG+ PDTV
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 161 SYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSM 220
Y+TL++ + + A F EM+ + D+ T +I + Q+ +A +LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 221 RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 280
G++P V++ L+ Y +A +A + M + NVVTY T+I K +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 281 EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
+ A L+ EM G++PN TY++I+ K+G ++ A L + ++G+ D V Y T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 341 IVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
+ AY + G + A+ +L E+ QP + + G +E+ + G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADD 456
+ + F +++ + +++ M S G PD ++ + K R + A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 457 LYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKEL 507
L+ EM+ +G S + ++ + RK F +F+++ + KE+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 122/247 (49%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
+A SP+V Y ++ + + + A+ L EM + G+ P+ +TY++++ K G +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+ + + E ++ D V Y+ L++ K + KA I + G+ P +V +N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N F + ++ L+ M +G+ P+ ++++L+ Y + A +++ +M
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D T ++ + + K+A LF M+ G SV +Y+ L++ + + + F EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 252 FRLMQRK 258
F M+R+
Sbjct: 689 FDQMRRE 695
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E A + Y ++ ++ + + A + EM +G+ P T++ L+ F GM
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+ L M ++ + +++L++ ++ A +I+ + S G+ PD Y +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
+ KA+ KEA L +EM+ +G +YS L+ +++ KF+EA VF +M
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 209/465 (44%), Gaps = 35/465 (7%)
Query: 3 VAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLIT 62
+ + +WI ++ + P V +N+++ + Q++ A L+ ++ + P TY+ LI
Sbjct: 139 ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIK 198
Query: 63 CFGKEGMFDSAISWLQQMEQDRVSGDLV---LYSNLIE-LARKLSDYSKAISIFSRLKSS 118
+ G+ + A L +M+ VS + +Y+ IE L ++ + +AI +F R+K
Sbjct: 199 AYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258
Query: 119 GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEA 178
P YN MIN++GKA + L EMR KP+ +Y+ L+N + +A
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 179 LSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRV 238
+F ++ E D+ N +++ Y + A +F M+ MG +P SYN ++
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 239 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN 298
YG A L +A +F M+R I + ++ ++ Y K+ + K +++EM G+EP+
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 299 AITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLH 358
++++ ++G+ G+ + + ++ + D Y +I Y + G + + L
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 359 ELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYAN 418
EL++ N P + TW R I +SR K Y
Sbjct: 499 ELKEKNFRP--------------DVVTWTSR-----------------IGAYSRKKLYVK 527
Query: 419 VIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
+EVFE+M +G PD ++L++ + E + M +
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
R P+ YN+++ +A + ++ L+ EMR P+ TY+ L+ F +EG+ + A
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
+Q+++D + D+ +Y+ L+E + A IFS ++ G PD +YN M++
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
+G+A L +A + EEM+ G+ P S+ LL+ Y + + ++ EM+E D
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
N M+++YG+L +++ M + +YN L+ +YG+A LF
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
++ K +VVT+ + I Y + + K + +EM + G P+ T +++
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 558
Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTM 340
++++ + + + GV + ++ + M
Sbjct: 559 QVEQVTSVLRTMH-KGVTVSSLVPKLM 584
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 182/388 (46%), Gaps = 10/388 (2%)
Query: 88 DLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLI 147
D++ ++ LI+ + Y +A S++ +L S VP Y +I + A L + A +++
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 148 EEMREQGVKPDTVSYSTLLNLYVEN-----HKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
EM+ V P T+ T+ N Y+E EA+ VF M C T N+MI+
Sbjct: 214 VEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
+YG+ + + +L+ MR P++ +Y L+ + L +A +F +Q +E
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
+V YN +++ Y ++ A + MQ+ G EP+ +Y+ ++ +G+AG A +F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARA 378
++++ G+ + ++ AY + V + ++ E+ + P+T + + + R
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
G+ + + + + DIS + +I ++ + + E+F +++ + PD
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGC 466
+ +Y + + + +++ EM + GC
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 195/438 (44%), Gaps = 50/438 (11%)
Query: 95 LIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK--EARLLIEE--M 150
++ +K +D K + L S+ +++ +INV + +L K ++ +L+ E +
Sbjct: 92 ILSFIQKETDPDKVADVLGALPSTH-----ASWDDLINVSVQLRLNKKWDSIILVCEWIL 146
Query: 151 REQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMA 210
R+ +PD + ++ L++ Y + ++ EA S++ ++ E T ++I Y +
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206
Query: 211 KDADRLFWSMRKMGIDPSVVS---YNT----LLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
+ A+ + M+ + P + YN L++ G E EAI +F+ M+R +
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTE---EAIDVFQRMKRDRCKPT 263
Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
TYN MI +YGK+ + + L EM++ +PN TY+ ++ + + G ++A +F+
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 324 KLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEE 383
+L+ G+E D +Y ++ +Y R G A + ++ P
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP---------------- 367
Query: 384 ATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLN 443
D + + M++ + R +++ VFE+M+ G P L+L+
Sbjct: 368 ---------------DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 444 SYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNIN 503
+Y K R+ + + EM E G V ML+LYG F +E + +++
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 504 KKELHHVVAGIYERANRL 521
++++ IY +A L
Sbjct: 473 DISTYNILINIYGKAGFL 490
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 12/344 (3%)
Query: 200 MIDVYGQLDMAKDADRLF----WSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
+I+V QL + K D + W +RK P V+ +N L+ YG+ + EA L+ +
Sbjct: 122 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 181
Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYST----IIAIWGK 311
TY +IK Y + E+A ++ EMQN + P I + I + +
Sbjct: 182 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
G + A +FQ+++ + Y MI Y + + +L E+R +PN
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
+ AR G E+A +F Q + G D+ V+ ++E +SR E+F M+
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 428 SAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFN 487
G PD +++++YG+ A+ ++ EM+ G + + H +LS Y +D
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 488 MLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
E++ + + + + + + +Y R + +I+ M
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 7/269 (2%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E P V+ YN ++ + RA A +F M+ G PDR +Y+ ++ +G+ G+
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A + ++M++ ++ + + L+ K D +K +I + +G+ PD N+M
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
+N++G+ F + ++ EM D +Y+ L+N+Y + +F E+ E N
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
D+ T I Y + + +F M G P + LL E +
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Query: 251 LFRLMQRKEIEQNVVTYNTMI-KIYGKSL 278
+ R M + VT ++++ K+ KSL
Sbjct: 566 VLRTMHKG------VTVSSLVPKLMAKSL 588
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 221/462 (47%), Gaps = 6/462 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E A +P++ YNV+++ + K++E A G D M + G PD ++YST+I K G
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR-LKSSGIVPDLVAYNT 129
D A+ +M + V+ D+ Y+ LI+ K D+ A+ ++ R L+ S + P++ +N
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 130 MINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVN 189
MI+ K + + E M++ + D +YS+L++ + +A SVF E++E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 190 CPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
+D+ T N M+ + + K++ L W + + ++VSYN L++ E EA
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
++RLM K + TY I + KA +MQE+++ G + Y++II
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNT 365
K +L+ A+ L +++ GVE++ + +I R + A L E+ + P
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 366 IPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEK 425
+ I L +AG+ EA+ ++ + G D+ + ++ R++K +E++ +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 426 MRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCV 467
+G D + ++++ + + + A + + M+ C
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 38/475 (8%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
+ A+ D Y+ S Y+ +LR + + + + +R + D ++I
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 62 TCFGKEGMFDSAISWLQQM-EQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
+GK M D A+ ++M E + Y+ L+ + + K S+F+ +++G+
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
P+L YN +I + K K F++AR ++ M ++G KPD SYST++N + K +AL
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
+F EM+E D+T NI+ID + K+ D + T + ++
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGF-----LKEKD-----------------HKTAMELWD 243
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
RL++ + NV T+N MI K + + + M+ E +
Sbjct: 244 ------------RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 301 TYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAK---RLL 357
TYS++I AG +D+A +F +L ID V Y TM+ + R G + + R++
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 358 HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 417
N + I L G+I+EAT ++R G D + +G I N
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 418 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQV 472
+ V +++ S+G D + A +++ K + E A +L EM + G + V
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 208/508 (40%), Gaps = 77/508 (15%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
++ LDW+ +E + P VF+Y+ V+ ++ +A + + A LFDEM +RG+APD Y+ L
Sbjct: 167 KARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 61 ITCFGKE------------------------------------GMFDSAISWLQQMEQDR 84
I F KE G D + ++M+Q+
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 85 VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
DL YS+LI + KA S+F+ L D+V YNTM+ F + KE+
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES- 344
Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI--- 201
L + + E + VSY+ L+ +EN K EA ++ M D TT I I
Sbjct: 345 LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 202 -----------------------DVYGQLDMA---------KDADRLFWSMRKMGIDPSV 229
DVY + ++A L M K G++ +
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 230 VSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQE 289
N L+ GEA R M + VV+YN +I K+ + +A+ ++E
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 290 MQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGL 349
M G +P+ TYS ++ + K+D A L+ + SG+E D +++ +I VG
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 350 VAHAKRLL----HELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGC 405
+ A ++ H N + T + + G AT ++ + G DI +
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 406 MIELFSRNKKYANVIEVFEKMRSAGYFP 433
+++ + + +E F+ R+ G FP
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 209/491 (42%), Gaps = 80/491 (16%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P++ +YN +L + AKQW LF G+AP+ TY+ LI
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI--------------- 156
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+++ K ++ KA + G PD+ +Y+T+IN K
Sbjct: 157 --------------------KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV--ENHK--------FVEALSVFAEMN 186
A +A L +EM E+GV PD Y+ L++ ++ ++HK +E SV+ +
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256
Query: 187 EVNCPLD-LTTCNIMID-----------------------VYGQLDMAK--DADRLFWSM 220
N + L+ C + D ++G D A+ +F +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 221 --RKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 278
RK ID VV+YNT+L + E++ L+R+M+ K N+V+YN +IK ++
Sbjct: 317 DERKASID--VVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENG 373
Query: 279 EHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQ 338
+ ++AT + + M +G + TY I G +++A + Q++ SSG +D Y
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 339 TMIVAYERVGLVAHAKRLLHELRQP----NTIPRETAITILARAGRIEEATWVFRQAFDA 394
++I + + A L+ E+ + N+ I L R R+ EA++ R+
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 395 GEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETA 454
G + + +I + K+ ++M G+ PD +++L + R+ + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 455 DDLYSEMQEEG 465
+L+ + + G
Sbjct: 554 LELWHQFLQSG 564
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 168/395 (42%), Gaps = 36/395 (9%)
Query: 19 VFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQ 78
++ Y+ ++ + A + A +F+E+ +R + D TY+T++ F + G ++ +
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 79 QMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAK 138
ME + S ++V Y+ LI+ + +A I+ + + G D Y I+
Sbjct: 350 IMEH-KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 139 LFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCN 198
+A +++E+ G D +Y+++++ + + EA ++ EM++ L+ CN
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 199 IMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA---------- 248
+I + +A M K G P+VVSYN L+ +A FGEA
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 249 -------------------------IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 283
+ L+ + +E +V+ +N +I + + A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 284 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 343
+M M++R N +TY+T++ + K G +RA +++ + G++ D + Y T++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 344 YERVGLVAHAKRLLHELRQPNTIPRETAITILARA 378
V++A + R P IL RA
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 8 WINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKE 67
W E + S ++ +YN++++ +L + + A ++ M +G A D+ TY I
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 68 GMFDSAISWLQQMEQDRVSGDLVLYSNLIE-------------LARKLSDYSKAI----- 109
G + A+ +Q++E D+ Y+++I+ L +++S + +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 110 ----------------SIFSR-LKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
S F R + +G P +V+YN +I KA F EA ++EM E
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
G KPD +YS LL + K AL ++ + + D+ NI+I + D
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
A + +M ++V+YNTL+ + + A ++ M + ++ ++++YNT++K
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 306
A + +N GI P T++ ++
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P + Y+++L + R ++ +LA L+ + Q G+ D ++ LI G D
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A++ + ME + +LV Y+ L+E K+ D ++A I+ + G+ PD+++YNT++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYV 170
+ A ++ R G+ P +++ L+ V
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 214/454 (47%), Gaps = 34/454 (7%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
++R PS+ ++ VL + ++K ++L LF M GI D Y+Y+ +I C + F
Sbjct: 62 QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+S + +M + D+V S+LI + + AI + S+++ G PD+V YNT+I
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ K L +A L + M GV+ D V+Y++L+ + ++ +A + +M +
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
++ T +IDV+ + +A +L+ M + +DP V +YN+L+ EA +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
LM K +VVTYNT+I + KS ++ T L +EM RG+ + ITY+TII + +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA 371
AG+ D A +F ++ S +PN
Sbjct: 362 AGRPDAAQEIFSRMDS----------------------------------RPNIRTYSIL 387
Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGY 431
+ L R+E+A +F + DI+ + +I + + ++F + G
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 432 FPDSHIIALVLNSYGKLREFETADDLYSEMQEEG 465
PD +++ + + R+++ +D LY +MQE+G
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 209/432 (48%), Gaps = 9/432 (2%)
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
I +M Q R +V +S ++ K +Y IS+F ++ GI DL +YN +IN
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
+ F A ++ +M + G +PD V+ S+L+N + + ++ +A+ + ++M E+ D
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFR 253
+ N +ID ++ + DA LF M + G+ V+YN+L+ + + +A L R
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 254 LMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAG 313
M ++I NV+T+ +I ++ K + +A L +EM R ++P+ TY+++I G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 314 KLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRE 369
++D A + + + G D V Y T+I + + V +L E+ Q +TI
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
T I +AGR + A +F + ++ S+ ++ N + + +FE M+ +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKS 410
Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHF-QMLSLYGARKDFNM 488
D +V++ K+ E A DL+ + +G + D V + M+S + ++ ++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG-LKPDVVSYTTMISGFCRKRQWDK 469
Query: 489 LESLFERLDSDS 500
+ L+ ++ D
Sbjct: 470 SDLLYRKMQEDG 481
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 163/320 (50%), Gaps = 3/320 (0%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE + P V YN ++ + A LFD M + G+ D TY++L+ G +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A ++ M + +++ ++ +I++ K +S+A+ ++ + + PD+ YN++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
IN EA+ +++ M +G PD V+Y+TL+N + ++ + E +F EM +
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
D T N +I Y Q A +F +M P++ +Y+ LL +A+
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
LF MQ+ EIE ++ TYN +I K E A +L + + +G++P+ ++Y+T+I+ +
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 311 KAGKLDRAAMLFQKLRSSGV 330
+ + D++ +L++K++ G+
Sbjct: 463 RKRQWDKSDLLYRKMQEDGL 482
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 32/173 (18%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA--- 73
P V YN ++ ++K+ + LF EM QRG+ D TY+T+I + + G D+A
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 74 ---------------------ISW--------LQQMEQDRVSGDLVLYSNLIELARKLSD 104
++W + M++ + D+ Y+ +I K+ +
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 105 YSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKP 157
A +F L G+ PD+V+Y TMI+ F + + + ++ LL +M+E G+ P
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/628 (22%), Positives = 255/628 (40%), Gaps = 107/628 (17%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQ-------RGIAPDRYTYSTLITCF 64
E +Y + YN +L ++ R GL DEM+Q + P+ YTY+ ++ +
Sbjct: 176 ELKYKLIIGCYNTLLNSLAR-------FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 65 GKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDL 124
K G + A ++ ++ + + D Y++LI + D A +F+ + G +
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 125 VAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAE 184
VAY +I+ A+ EA L +M++ P +Y+ L+ + + EAL++ E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 185 MNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAEL 244
M E ++ T ++ID + A L M + G+ P+V++YN L+ Y + +
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 245 FGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH------------------------ 280
+A+ + LM+ +++ N TYN +IK Y KS H
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 281 ----------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
+ A L+ M +RG+ P+ TY+++I K+ +++ A LF L GV
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA----GRIEEATW 386
+ V+Y +I Y + G V A +L ++ N +P L G+++EAT
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 387 V-----------------------------------FRQAFDAGEVKDISVFGCMIELFS 411
+ F+Q +G D + I+ +
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 412 RNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQ 471
R + + ++ KMR G PD + ++ YG L + A D+ M++ GC S
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 472 VHFQMLS-----LYGARK-------------DFNMLESLFERLDSDS-NINKKELHHVVA 512
++ YG +K +F+ + L E++ S N K ++
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 513 GIYERANRLNDASRIMNRMNKRRTFNSS 540
GI E N L A ++ + M + + S
Sbjct: 769 GICEVGN-LRVAEKVFDHMQRNEGISPS 795
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 237/521 (45%), Gaps = 16/521 (3%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE P++ Y V++ ++ ++E A L +M ++G+ P+ TY+ LI + K GM
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
+ A+ ++ ME ++S + Y+ LI+ K S+ KA+ + +++ ++PD+V YN++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I+ ++ F A L+ M ++G+ PD +Y+++++ ++ + EA +F + +
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
++ +ID Y + +A + M P+ +++N L+ EA
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
L M + ++ V T +I K + + A + Q+M + G +P+A TY+T I +
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRET 370
+ G+L A + K+R +GV D Y ++I Y +G A +L +R P +
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 371 AITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG 430
T L+ + E + G ++ M+E + V+E+ EKM
Sbjct: 709 --TFLSLIKHLLEMKY----GKQKGSEPELCAMSNMME-------FDTVVELLEKMVEHS 755
Query: 431 YFPDSHIIALVLNSYGKLREFETADDLYSEMQ-EEGCVFSDQVHFQMLSLYGARKDFNML 489
P++ ++ ++ A+ ++ MQ EG S+ V +LS K N
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 490 ESLFERLDSDSNINKKELHHV-VAGIYERANRLNDASRIMN 529
+ + + ++ + E V + G+Y++ + S N
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 206/467 (44%), Gaps = 22/467 (4%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P V YN ++ R+ ++ A+ L M RG+ PD++TY+++I K +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A +EQ V+ ++V+Y+ LI+ K +A + ++ S +P+ + +N +I
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ KEA LL E+M + G++P + + L++ +++ F A S F +M
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D T I Y + DA+ + MR+ G+ P + +Y++L++ YG+ A +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
+ M+ E + T+ ++IK LE M+ + +G EP S ++
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIK---HLLE-------MKYGKQKGSEPELCAMSNMM----- 739
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLL-HELRQPNTIPRET 370
+ D L +K+ V + Y+ +I+ VG + A+++ H R P E
Sbjct: 740 --EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 371 A----ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
++ + + EA V G + + +I + + VF+ +
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
GY+ D ++++ GK E +L++ M++ GC FS Q +
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 157/363 (43%), Gaps = 27/363 (7%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+ +P+V Y ++ +A + + AH + ++M + P+ T++ LI +G
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 71 DSAISWLQQME----QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVA 126
A ++M Q VS D +L L+ K D+ A S F ++ SSG PD
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLL----KDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 127 YNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMN 186
Y T I + + +A ++ +MRE GV PD +YS+L+ Y + + A V M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 187 EVNC-PLDLTTCNIMIDV----YGQ----------LDMAKDADRLFWSMRKM---GIDPS 228
+ C P T +++ + YG+ + + D + + KM + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 229 VVSYNTLLRVYGEAELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLM 287
SY L+ E A +F MQR E I + + +N ++ K +H +A ++
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 288 QEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERV 347
+M G P + +I K G+ +R +FQ L G D + ++ +I +
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 348 GLV 350
GLV
Sbjct: 880 GLV 882
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 249/530 (46%), Gaps = 19/530 (3%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + + + N VL+ L Q E+A L + G AP+ T+ TLI F K G D
Sbjct: 245 ERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A + MEQ + DL+ YS LI+ K +FS+ G+ D+V +++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+V+ K+ A ++ + M QG+ P+ V+Y+ L+ ++ + EA ++ ++ +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ T + +ID + + + L+ M KMG P VV Y L+ + L A+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
M + I NVV +N++I + + ++A + + M GI+P+ T++T++ +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL----LHELRQPNTIP 367
G+L+ A LF ++ G+E D + Y T+I A+ + H K L +L Q N I
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK-----HMKPTIGLQLFDLMQRNKIS 598
Query: 368 RETAIT-----ILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEV 422
+ A+ +L + RIE+A+ F + DI + MI + ++ +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 423 FEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGA 482
FE ++ + P++ + ++++ K + + A ++S M E+G + + ++ +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 483 RKDFNMLESLFERLDSDSNINKKELHH--VVAGIYERANRLNDASRIMNR 530
D LFE + + I+ + + ++ G+ +R R+++A+ I ++
Sbjct: 719 SVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRG-RVDEATNIFHQ 766
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 195/418 (46%), Gaps = 31/418 (7%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
PS+ Y+ ++ + L+++M + G PD Y L+ K+G+ A+ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+M + ++V++++LI+ +L+ + +A+ +F + GI PD+ + T++ V
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+EA L M + G++PD ++Y TL++ + ++ K L +F M D+
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
CN++I + + +DA + F ++ + ++P +V+YNT++ Y EA +F L++
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
N VT +I + K+ + + A + M +G +PNA+TY ++ + K+ ++
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA 376
+ LF++++ G+ P+ + I L
Sbjct: 724 GSFKLFEEMQEKGI-------------------------------SPSIVSYSIIIDGLC 752
Query: 377 RAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPD 434
+ GR++EAT +F QA DA + D+ + +I + + + ++E M G PD
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/543 (23%), Positives = 227/543 (41%), Gaps = 75/543 (13%)
Query: 16 SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAIS 75
+P+V + ++ + + + A LF M QRGI PD YSTLI + K GM
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 76 WLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFG 135
Q V D+V++S+ I++ K D + A ++ R+ GI P++V Y +I
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 136 KAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLT 195
+ EA + ++ ++G++P V+YS+L++ + + +++ +M ++ P D+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 196 TCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLM 255
+++D + + A R M I +VV +N+L+ + F EA+ +FRLM
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 256 QRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK---- 311
I+ +V T+ T++++ E+A L M G+EP+A+ Y T+I + K
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 312 -------------------------------AGKLDRAAMLFQKLRSSGVEIDPVLYQTM 340
+++ A+ F L +E D V Y TM
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 341 IVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGE 396
I Y + + A+R+ L+ PNT+ I +L + ++ A +F + G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 397 VKDISVFGCMIELFSRNKKYANVIEVFEKMRSAG-------------------------- 430
+ +GC+++ FS++ ++FE+M+ G
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 431 ---------YFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
PD A+++ Y K+ A LY M G V D + + LS Y
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG-VKPDDLLQRALSEYN 821
Query: 482 ARK 484
K
Sbjct: 822 PPK 824
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 212/456 (46%), Gaps = 4/456 (0%)
Query: 9 INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
+ E+ P + AY+ ++ +A + H LF + +G+ D +S+ I + K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
+A ++M +S ++V Y+ LI+ + +A ++ ++ G+ P +V Y+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
++I+ F K + L E+M + G PD V Y L++ + + A+ +M
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
+ L++ N +ID + +L+ +A ++F M GI P V ++ T++RV EA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAI 308
+ LF M + +E + + Y T+I + K ++ L MQ I + + +I +
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 309 WGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPN 364
K +++ A+ F L +E D V Y TMI Y + + A+R+ L+ PN
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
T+ I +L + ++ A +F + G + +GC+++ FS++ ++FE
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSE 460
+M+ G P +++++ K + A +++ +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
+ S + NVV+ + + + E A F+ + + + PD TY+T+I + D A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINV 133
+ ++ + V + LI + K +D AI +FS + G P+ V Y +++
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 134 FGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLD 193
F K+ + + L EEM+E+G+ P VSYS +++ + + EA ++F + + D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 194 LTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDP 227
+ I+I Y ++ +A L+ M + G+ P
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 15 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 74
+ P+ +++ + + + A +F M ++G P+ TY L+ F K + +
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 75 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 134
++M++ +S +V YS +I+ K +A +IF + + ++PD+VAY +I +
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 135 GKAKLFKEARLLIEEMREQGVKPD 158
K EA LL E M GVKPD
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P + YN ++ ++ + A +F+ ++ P+ T + LI K D
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
AI M + + V Y L++ K D + +F ++ GI P +V+Y+ +I
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
+ K EA + + + + PD V+Y+ L+ Y + + VEA ++ M
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 9 INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
I E P+ Y ++ ++ E + LF+EM+++GI+P +YS +I K G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPD 123
D A + Q ++ D+V Y+ LI K+ +A ++ + +G+ PD
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
+E SPS+ +Y++++ + + + + A +F + + PD Y+ LI + K G
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSR 114
A + M ++ V D + L R LS+Y+ + S+
Sbjct: 793 VEAALLYEHMLRNGVKPDDL-------LQRALSEYNPPKWLMSK 829
>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580,
chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2
SV=1
Length = 711
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 208/438 (47%), Gaps = 2/438 (0%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
++ +W+ ++ + YNV ++++ +Q++L + EM + G+ D TYST+
Sbjct: 168 KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 227
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
ITC + +++ AI W ++M + + D V YS ++++ K + +S++ R ++G
Sbjct: 228 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 287
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
PD +A++ + +FG+A + R +++EM+ VKP+ V Y+TLL K A S
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
+F EM E + T ++ +YG+ A+DA +L+ M+ + YNTLL +
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407
Query: 241 EAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
+ L EA LF M+ + + +Y M+ IYG + EKA L +EM G++ N
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467
Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHE 359
+ + ++ GKA ++D +F GV+ D L ++ A++++
Sbjct: 468 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 527
Query: 360 LRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF-GCMIELFSRNKKYAN 418
L + N I+ E F+ +A +V+ F C+I++ N ++
Sbjct: 528 LERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHER 587
Query: 419 VIEVFEKMRSAGYFPDSH 436
E+ G +P H
Sbjct: 588 AHELLYLGTLFGLYPGLH 605
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 183/375 (48%), Gaps = 6/375 (1%)
Query: 94 NLIELARKLSDYSKAISIFSRLKSSGIVP-DLVAYNTMINVFGKAKLFKEARLLIEEMRE 152
N + + L ++ K + F+ +KS + P + + YN + + F+ + EM +
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214
Query: 153 QGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKD 212
GV+ D ++YST++ + + +A+ F M + D T + ++DVY + ++
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 213 ADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 272
L+ G P ++++ L +++GEA + ++ + M+ +++ NVV YNT+++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 273 IYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEI 332
G++ + A +L EM G+ PN T + ++ I+GKA A L++++++ +
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPM 394
Query: 333 DPVLYQTMIVAYERVGLVAHAKRLLHELRQ-----PNTIPRETAITILARAGRIEEATWV 387
D +LY T++ +GL A+RL +++++ P+ + I G+ E+A +
Sbjct: 395 DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 388 FRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGK 447
F + AG ++ C+++ + K+ +V+ VF+ G PD + +L+
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMAL 514
Query: 448 LREFETADDLYSEMQ 462
E A+ + + ++
Sbjct: 515 CESSEDAEKVMACLE 529
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 220 MRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
M K G++ ++Y+T++ L+ +AI F M + + + VTY+ ++ +Y KS +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
E+ +L + G +P+AI +S + ++G+AG D + Q+++S V+ + V+Y T
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGE--- 396
++ A R G A+ L +E+ + P E +T L + +A W R A E
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI--YGKARWA-RDALQLWEEMK 388
Query: 397 ----VKDISVFGCMIELFSRNKKYANVIEVFEKMR-SAGYFPDSHIIALVLNSYGKLREF 451
D ++ ++ + + +F M+ S PD+ +LN YG +
Sbjct: 389 AKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKA 448
Query: 452 ETADDLYSEMQEEG 465
E A +L+ EM + G
Sbjct: 449 EKAMELFEEMLKAG 462
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 329 GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEA 384
GVE+D + Y T+I +R L A + + +P E + + +++G++EE
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 385 TWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNS 444
++ +A G D F + ++F Y + V ++M+S P+ + +L +
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 445 YGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYG 481
G+ + A L++EM E G +++ ++ +YG
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
>sp|Q9FKC3|PP424_ARATH Pentatricopeptide repeat-containing protein At5g48730,
chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2
SV=2
Length = 508
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 185/357 (51%), Gaps = 2/357 (0%)
Query: 2 SVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLI 61
++ + + + E+ Y P+V Y ++ + + KQ E AH LF EM G + Y+ L+
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 62 TCFGKEGMFDSAISWLQQMEQDR-VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
+ + + G FD+A + L++M+ D+ YS LI+ ++ + K + S ++ GI
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 121 VPDLVAYNTMINVFGKAKLFKEAR-LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEAL 179
P+ + YNT+I+ +GKAK+F E LI+ + E KPD+ + ++ L + N +
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 180 SVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY 239
+ + + ++ T NI++D YG+ K + M+K ++V+YN ++ +
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 240 GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNA 299
G A + +LFRLMQ + I + VT ++++ YG++ + +K +++ ++N I +
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432
Query: 300 ITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRL 356
+ ++ ++ +G+ K + + + G + D + Y+TM+ AY G+ H K L
Sbjct: 433 VFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 169/348 (48%), Gaps = 7/348 (2%)
Query: 105 YSKAISIFSRLKSS-GIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 163
+ AI +F L+ P++ Y +I + GK K ++A L +EM +G + Y+
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 164 TLLNLYVENHKFVEALSVFAEMNEV-NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRK 222
L++ Y + +F A ++ M NC D+ T +I+I + Q+ L MR+
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 223 MGIDPSVVSYNTLLRVYGEAELFGE-AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 281
GI P+ ++YNTL+ YG+A++F E L +++ + + + T N+ ++ +G + + E
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 282 KATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMI 341
N ++ Q+ GIEPN T++ ++ +GK+G + + + + ++ V Y +I
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 342 VAYERVGLVAHAKRLLHELRQPNTIPRETAITILARA-GRIEEAT---WVFRQAFDAGEV 397
A+ R G + + L ++ P + L RA GR +A V R ++
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 398 KDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSY 445
D+ F C+++ + R +K+A + V E M G+ PD ++ +Y
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 9/260 (3%)
Query: 248 AIHLFRLMQRKEI--EQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
AI +F L+ R+++ + NV Y +I + GK + EKA L QEM N G N Y+ +
Sbjct: 133 AIQVFELL-REQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 306 IAIWGKAGKLDRAAMLFQKLRSS-GVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-- 362
++ + ++G+ D A L ++++SS + D Y +I ++ +V + LL ++R+
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 363 --PNTIPRETAITILARAGRIEEATWVFRQAFDAGEVK-DISVFGCMIELFSRNKKYANV 419
PNTI T I +A E Q + K D + F N + +
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 420 IEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSL 479
+EK +S+G P+ ++L+SYGK ++ + MQ+ ++ + ++
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371
Query: 480 YGARKDFNMLESLFERLDSD 499
+G D +E LF + S+
Sbjct: 372 FGRAGDLKQMEYLFRLMQSE 391
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 415 KYANVIEVFEKMRSAGYF-PDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVH 473
++ + I+VFE +R ++ P+ I ++ GK ++ E A +L+ EM EGCV + +V+
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 474 FQMLSLYGARKDFNMLESLFERLDSDSN 501
++S Y F+ +L ER+ S N
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHN 216
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 212/445 (47%), Gaps = 6/445 (1%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E + P++ N ++ + + A L D M + G P+ TY ++ K G
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A+ L++ME+ ++ D V YS +I+ K A ++F+ ++ G D++ Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
F A + + L+ +M ++ + PD V++S L++ +V+ K EA + EM +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D T +ID + + + A+ + M G P++ ++N L+ Y +A L + + L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
FR M + + + VTYNT+I+ + + + E A L QEM +R + P+ ++Y ++
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIP 367
G+ ++A +F+K+ S +E+D +Y +I V A L L +P+
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 368 RETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
I L + G + EA +FR+ + G + + +I ++ E+++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 428 SAGYFPDSHIIALVLN--SYGKLRE 450
G+ D+ + +V++ S G+L++
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKK 614
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 216/492 (43%), Gaps = 39/492 (7%)
Query: 13 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDS 72
+R P + ++ + V R KQ++L L +M +GIA + YT S +I C +
Sbjct: 66 SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
A S + ++ + D V +S LI S+A+ + R+ G P L+ N ++N
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+A LLI+ M E G +P+ V+Y +L + ++ + A+ + +M E L
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
D +I+ID + +A LF M G ++ Y TL+R + A + + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
R M +++I +VV ++ +I + K + +A L +EM RGI P+ +TY+++I + K
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 313 GKLDRAAM-----------------------------------LFQKLRSSGVEIDPVLY 337
+LD+A LF+K+ GV D V Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 338 QTMIVAYERVGLVAHAKRLLHEL----RQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
T+I + +G + AK L E+ +P+ + + + L G E+A +F +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
+ DI ++ +I K + ++F + G PD +++ K
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 454 ADDLYSEMQEEG 465
AD L+ +M+E+G
Sbjct: 546 ADLLFRKMEEDG 557
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 172/355 (48%), Gaps = 6/355 (1%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
EE + Y++++ + + + A LF+EM +G D Y+TLI F G +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D L+ M + +++ D+V +S LI+ K +A + + GI PD V Y ++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
I+ F K +A +++ M +G P+ +++ L+N Y + + + L +F +M+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVY---GEAELFGE 247
D T N +I + +L + A LF M + P +VSY LL GE E +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE---K 475
Query: 248 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIA 307
A+ +F +++ ++E ++ YN +I + + + A +L + +G++P+ TY+ +I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 308 IWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
K G L A +LF+K+ G + Y +I A+ G + +L+ E+++
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 183/395 (46%), Gaps = 4/395 (1%)
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
D A+ Q+M + R L+ +S L + + Y + + +++ GI +L + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 131 INVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNC 190
IN + + A + ++ + G +PDTV++STL+N + EAL + M E+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 191 PLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH 250
L T N +++ DA L M + G P+ V+Y +L+V ++ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 251 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWG 310
L R M+ ++I+ + V Y+ +I K + A NL EM+ +G + + I Y+T+I +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 311 KAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTI 366
AG+ D A L + + + D V + +I + + G + A+ L E+ Q P+T+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 367 PRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKM 426
+ I + ++++A + G +I F +I + + + +E+F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
G D+ ++ + +L + E A +L+ EM
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%)
Query: 11 EEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMF 70
E+++ + YN+++ + A + + A LF + +G+ PD TY+ +I K+G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 71 DSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTM 130
A ++ME+D S + Y+ LI D +K+ + +K G D +
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 131 INVFGKAKLFK 141
+++ +L K
Sbjct: 604 VDMLSDGRLKK 614
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 24/272 (8%)
Query: 278 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 337
++ + A +L QEM P I +S + ++ + + D L +++ G+ +
Sbjct: 51 IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 338 QTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFD 393
MI R ++ A +++ +P+T+ T I L GR+ EA + + +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 394 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 453
G + ++ N K ++ + + ++M G+ P+ VL K +
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 454 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI-NKKELHHVVA 512
A +L +M+E + D V + ++ + G KD + LD+ N+ N+ E+ A
Sbjct: 231 AMELLRKMEERK-IKLDAVKYSII-IDGLCKDGS--------LDNAFNLFNEMEIKGFKA 280
Query: 513 GI---------YERANRLNDASRIMNRMNKRR 535
I + A R +D ++++ M KR+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P VFAYN ++ + + + A + D MR + +PD TY+ +I G D A+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
L Q+ D ++ Y+ LIE +A+ + + S G+ PD+ YNT+I K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+ A ++ + +G +PD +SY+ LL + K+ E + +M C ++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
+I+I + ++A L M++ G+ P SY+ L+ + AI M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII-AIWGKAGKL 315
++V YNT++ K+ + ++A + ++ G PN+ +Y+T+ A+W K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 316 DRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETA 371
RA + ++ S+G++ D + Y +MI R G+V A LL ++R P+ +
Sbjct: 456 -RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 372 ITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIE 408
+ +A RIE+A V G + + + +IE
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 209/485 (43%), Gaps = 43/485 (8%)
Query: 66 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 125
+ G + ++ L+ M + + D++L + LI+ L + KA+ + L+ G PD+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 126 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 185
AYN +IN F K +A +++ MR + PDTV+Y+ ++ K AL V ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 186 NEVNCPLDLTTCNIMID---VYGQLD---------------------------MAKDA-- 213
NC + T I+I+ + G +D M K+
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 214 DRLFWSMRKM---GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTM 270
DR F +R + G +P V+SYN LLR + E L M ++ + NVVTY+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 271 IKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
I + + E+A NL++ M+ +G+ P+A +Y +IA + + G+LD A + + S G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 331 EIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILARAGRIEEATW 386
D V Y T++ + G A + +L + PN+ T + L +G A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 387 VFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYG 446
+ + G D + MI R E+ MRS + P +VL +
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 447 KLREFETADDLYSEMQEEGCVFSDQVH---FQMLSLYGARKDFNMLESLFERLDSDSNIN 503
K E A ++ M GC ++ + + + G R + L + R+D+ S +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYS 579
Query: 504 KKELH 508
K LH
Sbjct: 580 FKRLH 584
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 164/350 (46%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P+V Y +++ + + A L DEM RG+ PD +TY+T+I KEGM D A
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
++ +E D++ Y+ L+ + + + +++ S P++V Y+ +I +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
+EA L++ M+E+G+ PD SY L+ + + A+ M C D+
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
N ++ + A A +F + ++G P+ SYNT+ + A+H+ M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
I+ + +TYN+MI + ++A L+ +M++ P+ +TY+ ++ + KA +++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTI 366
A + + + +G + Y +I G A A L ++L + + I
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 14 RYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSA 73
+ P+V Y++++ + R + E A L M+++G+ PD Y+Y LI F +EG D A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 74 ISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLK----------------- 116
I +L+ M D D+V Y+ ++ K +A+ IF +L
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 117 ------------------SSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPD 158
S+GI PD + YN+MI+ + + EA L+ +MR P
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 159 TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYG 205
V+Y+ +L + + H+ +A++V M C + TT ++I+ G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 13 ARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
+ PSV YN+VL +A + E A + + M G P+ TY+ LI G G
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 222/463 (47%), Gaps = 11/463 (2%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E+R PS+ + +L + + K++++ L D ++ G++ D YT + L+ CF +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A S+L +M + D+V +++LI + +A+S+ +++ GI PD+V Y T+I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
+ K A L ++M G++PD V Y++L+N + ++ +A S+ M +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
D+ T N +ID + + DA+ L+ M +M I P++ +Y +L+ + EA +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 252 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGK 311
F LM+ K +VV Y ++I + K + + A + EM +G+ N ITY+T+I +G+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 312 AGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ-------PN 364
GK + A +F + S GV + Y ++ G V A + ++++ PN
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 365 TIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFE 424
+ L G++E+A VF I + +I+ + K N + +F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 425 KMRSAGYFPDSHIIALVLNSYGKLREF--ETADDLYSEMQEEG 465
+ S G P+ ++ G RE A L+ +M+E+G
Sbjct: 485 SLPSKGVKPN--VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 9/414 (2%)
Query: 22 YNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQME 81
Y +LRN L + Q+ A LF M + P ++ L+ K FD I+ ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 82 QDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFK 141
VS DL + L+ + S A S ++ G PD+V + ++IN F +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 142 EARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMI 201
EA ++ +M E G+KPD V Y+T+++ +N ALS+F +M D+ ++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 202 DVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIE 261
+ +DAD L M K I P V+++N L+ + + F +A L+ M R I
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 262 QNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAML 321
N+ TY ++I + ++A + M+ +G P+ + Y+++I + K K+D A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 322 FQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITILAR 377
F ++ G+ + + Y T+I + +VG A+ + + PN + L
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 378 AGRIEEATWVF----RQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMR 427
G++++A +F ++ D G +I + ++ N K + VFE MR
Sbjct: 400 NGKVKKALMIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 164/357 (45%), Gaps = 38/357 (10%)
Query: 12 EARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFD 71
E P V Y ++ ++ + A LFD+M GI PD Y++L+ G +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 72 SAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMI 131
A S L+ M + ++ D++ ++ LI+ K + A +++ + I P++ Y ++I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 132 NVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCP 191
N F EAR + M +G PD V+Y++L+N + + K +A+ +F EM++
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 192 LDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHL 251
+ T +I +GQ+ A +F M G+ P++ +YN LL +A+ +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 252 FRLMQRKEIE---QNVVTYNTMIK--IYGKSLEH-------------------------- 280
F MQ++E++ N+ TYN ++ Y LE
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 281 -------EKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGV 330
+ A NL + ++G++PN +TY+T+I+ + G A +LF+K++ GV
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 151/330 (45%), Gaps = 4/330 (1%)
Query: 140 FKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNI 199
F EA L M E P + ++ LLN+ + KF +++ + + DL TCN+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 200 MIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKE 259
+++ + Q A M K+G +P +V++ +L+ + EA+ + M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 260 IEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA 319
I+ +VV Y T+I K+ A +L +M+N GI P+ + Y++++ +G+ A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 320 MLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ----PNTIPRETAITIL 375
L + + ++ D + + +I A+ + G A+ L +E+ + PN + I
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 376 ARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDS 435
G ++EA +F G D+ + +I F + KK + +++F +M G ++
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 436 HIIALVLNSYGKLREFETADDLYSEMQEEG 465
++ +G++ + A +++S M G
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 89/222 (40%), Gaps = 4/222 (1%)
Query: 246 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTI 305
G+A+ RL+ + Y +++ SL+ +A +L M P+ I ++ +
Sbjct: 19 GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78
Query: 306 IAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR---- 361
+ + K K D L L+ GV D ++ + + A L ++
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 362 QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIE 421
+P+ + + I R+EEA + Q + G D+ ++ +I+ +N +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 422 VFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 463
+F++M + G PD + ++N + AD L M +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 35/106 (33%)
Query: 16 SPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQR--------------------------- 48
+P+++ YNV+L + + E A +F++MR+R
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 49 --------GIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDRVS 86
G+ P+ TY+T+I+ +EG+ A ++M++D VS
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 211/467 (45%), Gaps = 41/467 (8%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P VF+YN V+R K+ E A L +EM+ G + T+ LI F K G D A+ +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
L++M+ + DLV+Y++LI + + ++F + G P + YNT+I F K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
KEA + E M E+GV+P+ +Y+ L++ K EAL + M E + + T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRK-------------MG------------------- 224
NI+I+ + + DA + M+K +G
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 225 -----IDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 279
DP V+SYN L+ + +A+ ++ L+ K + VT N ++ K+ +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 280 HEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQT 339
KA L +++ + I N+ TY+ +I + K G L+ A L K+R S ++ Y
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 340 MIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RAGRIEEATWVFRQAFDAG 395
++ + + G + A RL E+++ N P + I+ +AG I+ A + AG
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 396 EVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 442
D+ + +I F + I F+KM +G+ PD+HI VL
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 7/459 (1%)
Query: 25 VLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQDR 84
+L ++ ++ A G+ M +RG A + Y ++ L+ + A+S L++M ++
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 85 VSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEAR 144
+ D+ Y+ +I + + KA+ + + +K SG LV + +I+ F KA EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 145 LLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVY 204
++EM+ G++ D V Y++L+ + + + ++F E+ E T N +I +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 205 GQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNV 264
+L K+A +F M + G+ P+V +Y L+ EA+ L LM K+ E N
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 265 VTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAA-MLFQ 323
VTYN +I K A +++ M+ R P+ ITY+ ++ G LD A+ +L+
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 324 KLR-SSGVEIDPVLYQTMIVAYERVGLVAHA----KRLLHELRQPNTIPRETAITILARA 378
L+ SS + D + Y +I + + A L+ +L + + + +A
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHII 438
G + +A +++Q D+ V++ + MI+ F + + KMR + P
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 439 ALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 477
+L+S K + A L+ EMQ + F D V F ++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIM 570
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 38/378 (10%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
R A+ D + E SP YN ++R + Q + A +F+ M +RG+ P+ YTY+ L
Sbjct: 265 RGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I G A+ L M + + V Y+ +I K + A+ I +K
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 121 VPDLVAYNTMI-NVFGKAKLFKEARLLIEEMREQG-VKPDTVSYSTLLNLYVENHKFVEA 178
PD + YN ++ + K L + ++LL +++ PD +SY+ L++ + ++ +A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 179 LSVFAEMNEVNCPLDLTTCNI-----------------------------------MIDV 203
L ++ + E D T NI MID
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 204 YGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQN 263
+ + M A L MR + PSV YN LL + +A LF MQR +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 264 VVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQ 323
VV++N MI K+ + + A +L+ M G+ P+ TYS +I + K G LD A F
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 324 KLRSSGVEIDPVLYQTMI 341
K+ SG E D + +++
Sbjct: 624 KMVDSGFEPDAHICDSVL 641
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 183/430 (42%), Gaps = 6/430 (1%)
Query: 73 AISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMIN 132
A S+ ++M + + V S L+E ++ A + + + G ++ +N ++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 133 VFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPL 192
+ +A L+ EMR + PD SY+T++ + E + +AL + EM C
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 193 DLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLF 252
L T I+ID + + +A M+ MG++ +V Y +L+R + + LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 253 RLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKA 312
+ + +TYNT+I+ + K + ++A+ + + M RG+ PN TY+ +I
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 313 GKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAI 372
GK A L + E + V Y +I + GLVA A ++ +++ T P
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 373 TI----LARAGRIEEATWVFRQAFDAGEVKDISV--FGCMIELFSRNKKYANVIEVFEKM 426
I L G ++EA+ + D V + +I + + +++++ +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 427 RSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDF 486
D ++LNS K + A +L+ ++ + V + + M+ +
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 487 NMLESLFERL 496
N+ + L ++
Sbjct: 511 NVAKGLLCKM 520
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 9 INEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEG 68
+ + + P V +YN ++ + + + A ++D + ++ A DR T + L+ K G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 69 MFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYN 128
+ A+ +Q+ ++ + Y+ +I+ K + A + +++ S + P + YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 129 TMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEV 188
+++ K +A L EEM+ PD VS+
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF-------------------------- 567
Query: 189 NCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEA 248
NIMID + K A+ L M + G+ P + +Y+ L+ + + EA
Sbjct: 568 ---------NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 249 IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 295
I F M E + ++++K E +K T L++++ ++ I
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 196/395 (49%), Gaps = 6/395 (1%)
Query: 18 SVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWL 77
+V++ +V+ + R + E + L E +GI P+ YTY+T+I + K+ F L
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 78 QQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKA 137
+ M++D V + V Y+ L+EL+ K S A +F ++ GI D+ Y ++I+ +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 138 KLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC 197
K A LL +E+ E+G+ P + +Y L++ + + A + EM +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 198 NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIH-LFRLMQ 256
N +ID Y + M +A ++ M + G V + NT+ + + + EA LFR+M+
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
++ + V+Y +I +Y K E+A L EM ++G++PNAITY+ +I + K GK+
Sbjct: 463 -GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAI 372
A L + ++G++ D Y ++I V A RL E+ N++ I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 373 TILARAGRIEEATWVFRQAFDAGEVKDISVFGCMI 407
+ L++AG+ +EA ++ + G D V+ +I
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 164/346 (47%)
Query: 17 PSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISW 76
P + YN ++ ++ + + G+ M++ G+ ++ TY+ L+ K G A
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 77 LQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGK 136
+M + + D+ +Y++LI + + +A +F L G+ P Y +I+ K
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 137 AKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTT 196
A +L+ EM+ +GV V ++TL++ Y EA ++ M + D+ T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 197 CNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 256
CN + + +L +A + + M + G+ S VSY L+ VY + EA LF M
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 257 RKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLD 316
K ++ N +TYN MI Y K + ++A L M+ G++P++ TY+++I A +D
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 317 RAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQ 362
A LF ++ G++ + V Y MI + G A L E+++
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 204/462 (44%), Gaps = 8/462 (1%)
Query: 23 NVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAISWLQQMEQ 82
++V R + +E +FD M ++G++ D + + K D + ++M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 83 DRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 142
V + + ++E + + K+ + GI P+ YNT+IN + K + F
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 143 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 202
+++ M++ GV + V+Y+ L+ L V+N K +A +F EM E D+ +I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 203 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 262
+ K A LF + + G+ PS +Y L+ + G A L MQ K +
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 263 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 322
V +NT+I Y + ++A+ + M+ +G + + T +TI + + + + D A
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 323 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARA 378
++ GV++ V Y +I Y + G V AKRL E+ QPN I I +
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMI--ELFSRNKKYANVIEVFEKMRSAGYFPDSH 436
G+I+EA + G D + +I E + N A + +F +M G +S
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA--MRLFSEMGLKGLDQNSV 575
Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLS 478
++++ K + + A LY EM+ +G ++V+ ++
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 36/307 (11%)
Query: 1 RSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTL 60
R+ + D + E+ SPS + Y ++ V + + A L +EM+ +G+ + ++TL
Sbjct: 347 RAFLLFDELTEKG-LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 61 ITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGI 120
I + ++GM D A MEQ D+ + + +L Y +A R+ G+
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 121 VPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALS 180
V+Y +I+V+ K +EA+ L EM +GV+P+ ++Y+ ++ Y + K
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI----- 520
Query: 181 VFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYG 240
K+A +L +M G+DP +Y +L+
Sbjct: 521 ------------------------------KEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 241 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAI 300
A+ EA+ LF M K ++QN VTY MI K+ + ++A L EM+ +G +
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 301 TYSTIIA 307
Y+ +I
Sbjct: 611 VYTALIG 617
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 167/424 (39%), Gaps = 69/424 (16%)
Query: 108 AISIFSRLKS--SGIVPDLVAYNTMINVFGKAKLFKEARLL-------------IEEMRE 152
I F L+ S + PDL A T+ + + F E R L +EE+
Sbjct: 79 CIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGS 138
Query: 153 QGVKPD---------TVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTC------ 197
V D + + +YV+N F E L VF M + +D +C
Sbjct: 139 AMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVA 198
Query: 198 --------------------NIMIDVY------------GQLDMAKDADRLFWSMRKMGI 225
+ I VY G+++ +K +L GI
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSK---KLIKEFSVKGI 255
Query: 226 DPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 285
P +YNT++ Y + F + ++M++ + N VTY ++++ K+ + A
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 286 LMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYE 345
L EM+ RGIE + Y+++I+ + G + RA +LF +L G+ Y +I
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 346 RVGLVAHAKRLLHELRQPNT----IPRETAITILARAGRIEEATWVFRQAFDAGEVKDIS 401
+VG + A+ L++E++ + T I R G ++EA+ ++ G D+
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 402 VFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEM 461
+ F+R K+Y + +M G + +++ Y K E A L+ EM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 462 QEEG 465
+G
Sbjct: 496 SSKG 499
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 160/405 (39%), Gaps = 59/405 (14%)
Query: 152 EQGVKPDTVSYSTLLNLYVENHKFVEALSVF-AEMNE--------------VNCPLDLTT 196
E +KPD + TL + N +F E S+ + +N+ V+C +
Sbjct: 90 ESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEK 149
Query: 197 C-------NIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAI 249
+++ VY M ++ R+F M K G+ S L + +
Sbjct: 150 FEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCL 209
Query: 250 HLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIW 309
+FR M ++ V + +++ + E EK+ L++E +GI+P A TY+TII +
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 310 GKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRE 369
K + + ++ GV + V Y LL EL N
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYT-----------------LLMELSVKN----- 307
Query: 370 TAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSA 429
G++ +A +F + + G D+ V+ +I R +F+++
Sbjct: 308 ---------GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 430 GYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLY---GARKDF 486
G P S+ +++ K+ E A+ L +EMQ +G + V ++ Y G +
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 487 NMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRM 531
+M+ + E+ +++ + +A + R R ++A + + RM
Sbjct: 419 SMIYDVMEQKGFQADVFT---CNTIASCFNRLKRYDEAKQWLFRM 460
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/158 (18%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 379 GRIEEATWVFRQAFDAGEVKDISVFGCMIELFS--RNKKYANVIEVFEKMRSAGYFPDSH 436
G EE VF G I C++ L + + ++ +E+F +M +G +
Sbjct: 168 GMFEEGLRVFDYMVKKG--LSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVY 225
Query: 437 IIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERL 496
+ +V+ + E E + L E +G + +++ Y ++DF+ +E + + +
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 497 DSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 534
D + K + ++ + + +++DA ++ + M +R
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,703,883
Number of Sequences: 539616
Number of extensions: 7481542
Number of successful extensions: 32441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 21020
Number of HSP's gapped (non-prelim): 3266
length of query: 542
length of database: 191,569,459
effective HSP length: 122
effective length of query: 420
effective length of database: 125,736,307
effective search space: 52809248940
effective search space used: 52809248940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)