Your job contains 1 sequence.
>038404
MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP
VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK
STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA
VVCGVIIGGGNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY
PKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038404
(287 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 998 1.3e-100 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 973 5.8e-98 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 934 7.8e-94 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 884 1.6e-88 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 880 4.1e-88 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 868 7.7e-87 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 853 3.0e-85 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 850 6.2e-85 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 815 3.2e-81 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 792 8.7e-79 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 663 4.1e-65 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 663 4.1e-65 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 595 6.6e-58 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 595 6.6e-58 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 577 5.3e-56 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 557 7.0e-54 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 557 7.0e-54 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 519 7.4e-50 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 506 1.8e-48 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 499 9.8e-48 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 489 1.1e-46 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 465 3.9e-44 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 465 3.9e-44 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 443 8.4e-42 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 443 8.4e-42 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 441 1.4e-41 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 410 2.6e-38 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 386 9.2e-36 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 386 9.2e-36 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 353 1.3e-34 2
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 349 7.7e-32 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 319 1.2e-28 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 317 1.9e-28 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 291 2.5e-28 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 312 6.4e-28 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 306 2.8e-27 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 304 4.5e-27 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 294 5.2e-26 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 294 5.2e-26 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 293 6.6e-26 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 293 6.6e-26 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 291 1.1e-25 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 291 1.1e-25 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 287 2.9e-25 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 286 3.6e-25 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 280 1.6e-24 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 271 1.4e-23 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 270 1.8e-23 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 268 2.9e-23 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 266 4.8e-23 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 265 6.1e-23 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 265 6.1e-23 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 261 1.6e-22 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 261 1.6e-22 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 257 4.3e-22 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 257 4.3e-22 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 252 1.5e-21 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 252 1.5e-21 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 252 1.5e-21 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 249 3.0e-21 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 246 1.5e-20 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 240 7.5e-20 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 213 9.4e-20 2
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 236 9.8e-20 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 235 2.5e-19 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 230 3.1e-19 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 234 3.4e-19 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 229 4.0e-19 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 229 6.6e-19 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 231 7.1e-19 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 204 5.2e-18 2
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 224 5.4e-18 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 224 6.2e-18 1
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 216 3.7e-17 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 142 1.4e-15 3
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 130 1.0e-14 3
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 194 1.4e-14 2
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 134 1.3e-08 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 143 6.7e-08 2
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 143 6.7e-08 2
FB|FBgn0019662 - symbol:qm "quemao" species:7227 "Drosoph... 134 2.1e-06 1
UNIPROTKB|C9J7M1 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 130 2.4e-06 1
UNIPROTKB|C9J6G3 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 128 3.5e-06 1
UNIPROTKB|O95749 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 130 4.6e-06 1
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 130 4.6e-06 1
WB|WBGene00011058 - symbol:fdps-1 species:6239 "Caenorhab... 131 5.0e-06 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 129 5.6e-06 1
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 128 7.8e-06 1
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 130 8.1e-06 1
MGI|MGI:1341724 - symbol:Ggps1 "geranylgeranyl diphosphat... 127 1.0e-05 1
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 126 1.3e-05 1
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 104 1.9e-05 2
RGD|1359680 - symbol:Ggps1 "geranylgeranyl diphosphate sy... 124 2.3e-05 1
ASPGD|ASPL0000044272 - symbol:AN1592 species:162425 "Emer... 126 2.4e-05 1
DICTYBASE|DDB_G0293588 - symbol:ggps1 "geranylgeranyl dip... 115 0.00026 1
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 112 0.00057 1
SGD|S000005990 - symbol:BTS1 "Geranylgeranyl diphosphate ... 111 0.00089 1
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 200/290 (68%), Positives = 235/290 (81%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
+KA+ VNKALD V LR P KIHEAMRYSLLAGGKRVRPVLCIA+CELVGG+ES+AMP A
Sbjct: 82 TKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAA 141
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKS 121
CA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDALLS AFEH+A A S
Sbjct: 142 CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATS 201
Query: 122 TEI-SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
+++ SP RVVRA+ EL A+G+EGLVAG+++DI SEG DV L LE IHLHKTA LL
Sbjct: 202 SDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALL 261
Query: 178 EAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ + E+ER+RK+ARCIGLLFQVVDDILDVTKSSKELGKTAGKDL++DK
Sbjct: 262 EASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADK 321
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPK+MG+E +R+FA L +A ++L F+ + APL LA YIA RQ+
Sbjct: 322 LTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 195/290 (67%), Positives = 229/290 (78%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA VN+ALD V LR P KIHEA+RYSLLA GKRVRPVLCIA+CELVGG+ES A+P
Sbjct: 59 MIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALP 118
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHKVFGED A+LAGDAL+S AFEH+A
Sbjct: 119 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT- 177
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
ST +SP RVVRAI EL A+GS+GLVAG+++D+ S G DV L LE IH+HKTA LL
Sbjct: 178 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 237
Query: 178 EAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EAA + EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL++DK
Sbjct: 238 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADK 297
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPKLMG+E ++ FA LL+ A E+L F+ +R PL LA YIA RQ+
Sbjct: 298 LTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 178/288 (61%), Positives = 226/288 (78%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+T KA VNKALDE + ++ P IHEAMRYSLLAGGKRVRP+LC+A+CELVGG++ +AM
Sbjct: 82 VTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMA 141
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+HDDLPCMDNDD RRGKPTNHK++GED A+LAGD+LL+ AFEH+
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNS 201
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEA 179
+ ++P R+V A+AEL ++G+EGLVAG++ DI G VSL LE IH+HKTA LLE+
Sbjct: 202 TAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLES 261
Query: 180 AXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+ +EVE++R++ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDLV DK T
Sbjct: 262 SVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTT 321
Query: 240 YPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
YPKL+G+E A++FA +L +A ++L F+ +AAPL LA YIA R +
Sbjct: 322 YPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 178/291 (61%), Positives = 224/291 (76%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ VN ALD +V L P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 70 MIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMDN D RRGKPTNHKV+GED A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE--GKD-VSLNELENIHLHKTAKL 176
S+ ++P++++RA+ EL A+G+ GLVAG+++D+ SE D V L LE IHLHKTA L
Sbjct: 190 SSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 177 LEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA E+E++RKYARCIGLLFQVVDDILDVTKS++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ ++AAPL LA YIA R +
Sbjct: 310 KLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 176/291 (60%), Positives = 223/291 (76%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ V+ AL+ +V L+ P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 67 MIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 126
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMD+ D RRGKPTNHK FGED A+LAGDALL+LAFEH+
Sbjct: 127 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFV 186
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKL 176
S ++P+R++RA+ EL A+G++GLVAG++ D+ S+G DV L LE IHLHKTA L
Sbjct: 187 SNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAAL 246
Query: 177 LEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA E+E++RKYARCIGLLFQVVDDILDVT+S+KELGKTAGKD+++
Sbjct: 247 LEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAG 306
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ +AAPL LA YIA R +
Sbjct: 307 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 175/288 (60%), Positives = 214/288 (74%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ VNKAL+E + + P KIHEAMRY++LA GKRVRP+LC+ASCELVGG E++AMP
Sbjct: 89 MMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMP 148
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKV+GE AIL+G ALLSLAFEH+
Sbjct: 149 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT-- 206
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD---VSLNELENIHLHKTAKLL 177
+ EIS +R+V A+ EL ++G+ GLVAG+ MDI SEG D V L LE IH+HKTA LL
Sbjct: 207 TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLL 266
Query: 178 EAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
E A + E+E VRK+ARCIGLLFQVVDDILD TKSS+ELGKTAGKD ++ K
Sbjct: 267 ETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGK 326
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
TYPKL+G+E +++F L A + L F + APL L +IA+R
Sbjct: 327 LTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANR 374
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 169/291 (58%), Positives = 221/291 (75%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M KA+ V+ AL+ +V + P I EA+RYSLLAGGKRVRP+LCIA+CELVGGDE++AM
Sbjct: 70 MIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHT SL+HDDLPCMD+ D RRGKPTNHKVFGE A+LAGDALL+LAFEH+
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVV 189
Query: 121 STE-ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK---DVSLNELENIHLHKTAKL 176
S+ ++P+R++R++ EL A+G++GLVAG++ D+ S+G DV L LE IHLHKTA L
Sbjct: 190 SSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAAL 249
Query: 177 LEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
LEAA E++++RKY RCIGLLFQVVDDI+DVT+S++ELGKTAGKD+++
Sbjct: 250 LEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMAR 309
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K TYP+L+G+E +R+ A L +A E+L F+ + APL LA YIA R +
Sbjct: 310 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 166/290 (57%), Positives = 212/290 (73%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
M SKA+ +N+ALDE + L P IH+AMRY++LAGGKRVRP+LC+A+CELVGG+E A+
Sbjct: 85 MISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQ 144
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+EMIHTMSL+ DDLPCMDNDD RRGKPT HKVFGE AIL+G ALL+LAFEH+
Sbjct: 145 AACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT-- 202
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG---KDVSLNELENIHLHKTAKLL 177
++S ++VRA+ EL ++G++GLVAG+ D+ SEG DV L +LE IH+HKT LL
Sbjct: 203 EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLL 262
Query: 178 EAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDK 237
EA+ E+E+VR +ARCIGLLFQVVDDILD TKSS+ELGKTAGKD V+ K
Sbjct: 263 EASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGK 322
Query: 238 ATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
TYPK++G+E +++F L A E L F+ + PL L +IA+R H
Sbjct: 323 LTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 165/293 (56%), Positives = 212/293 (72%)
Query: 1 MTSKAKRVNKALDETVQLRHPA-KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAM 59
M +KAK VNKAL+E V LR P KI EAMRY+LL+ GKRVRP+LC+A+CELVGG ES+AM
Sbjct: 54 MVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAM 113
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
ACA+EM+H SL+ DDLPCMDND RRGKPTNH VFGE AILA AL++LA + +
Sbjct: 114 SAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS 173
Query: 120 KS-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG----KDVSLNELENIHLHKTA 174
+ ++ P+R+++ + E+ AV EGLVAG+ D+ EG D L LE IH+HKTA
Sbjct: 174 STFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTA 231
Query: 175 KLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
LLEAA + E+ER+R YARCIGL+FQVVDD+LDVTKSS+ELGKTAGKDL+
Sbjct: 232 ALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLI 291
Query: 235 SDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+ K TYP+LMG+E ++++A L +A E L F++ + APL LA YI +RQ+
Sbjct: 292 AGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 162/301 (53%), Positives = 216/301 (71%)
Query: 1 MTSKAKRVNKALDETVQLRH-------PA-KIHEAMRYSLLAGGKRVRPVLCIASCELVG 52
M +KAK +NKALD ++ L + P ++H+AMRY+LL GGKRVRP+LC+ +CELVG
Sbjct: 36 MKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVG 95
Query: 53 GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSL 112
G ES+AMP ACA+EMIH SL+ DDLPCMD+D RRGKPTNHKVFGE T+ILA +AL SL
Sbjct: 96 GQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSL 155
Query: 113 AFEH-VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE-----GKDVSLNELE 166
A + +A+ S ++ +RV+RA+ E+ AVG+EGLVAG+ D+ E +D L LE
Sbjct: 156 AVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLE 215
Query: 167 NIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELG 226
+H+HKTA L+EAA + E+ER++ YARC+GL+FQV+DD+LD TKSS+ELG
Sbjct: 216 LMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELG 275
Query: 227 KTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
KTAGKDL++ K TYPK+MG++NAR++A L +A E L F+ + PL LA YI RQ
Sbjct: 276 KTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQ 335
Query: 287 H 287
+
Sbjct: 336 N 336
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 133/284 (46%), Positives = 191/284 (67%)
Query: 8 VNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
V++AL+ + P+ +H AMRYS+ AGGKRVRP+L +A+C+ VGGD + A+P ACA+
Sbjct: 14 VDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAM 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TE 123
EMIHT SL+HDDLP MD+DDFRRG+PTNHKVFGE AILAGDALL+ AF +++ S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAXX 182
+ DR++ I E+ GS G+V G+++D++SEG K++ L ++ IH KT L++A+
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 183 XXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
N V+ V +Y IGL FQ+ DDILD+ +++++GK AG D KATYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
++G+ +++ A +LL A E L+ F+ RA PL +A YI SR+
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVSRK 296
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 133/284 (46%), Positives = 191/284 (67%)
Query: 8 VNKALDETVQLRH--PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
V++AL+ + P+ +H AMRYS+ AGGKRVRP+L +A+C+ VGGD + A+P ACA+
Sbjct: 14 VDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAM 73
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS--TE 123
EMIHT SL+HDDLP MD+DDFRRG+PTNHKVFGE AILAGDALL+ AF +++ S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 124 ISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG-KDVSLNELENIHLHKTAKLLEAAXX 182
+ DR++ I E+ GS G+V G+++D++SEG K++ L ++ IH KT L++A+
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 183 XXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPK 242
N V+ V +Y IGL FQ+ DDILD+ +++++GK AG D KATYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 243 LMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
++G+ +++ A +LL A E L+ F+ RA PL +A YI SR+
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVSRK 296
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 120/268 (44%), Positives = 173/268 (64%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
SK K + +L+ P + EAM YSL AGGKR+RP+L A+ + + + + A
Sbjct: 12 SKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAA 71
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CALEMIHT SLVHDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A
Sbjct: 72 CALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQ 131
Query: 123 -EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAX 181
EIS ++ VR + EL A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE A
Sbjct: 132 KEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAV 191
Query: 182 XXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
+ E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYT 251
Query: 242 KLMGIENARKFACDLLAQATEELAYFEV 269
L ++ A+ + +A+A + + ++
Sbjct: 252 TLFTVDRAKDILDETIAKAKDAIGSLQL 279
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 120/268 (44%), Positives = 173/268 (64%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
SK K + +L+ P + EAM YSL AGGKR+RP+L A+ + + + + A
Sbjct: 12 SKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAA 71
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
CALEMIHT SLVHDDLPCMD+DD RRGKPTNHKVFGE A+LAGD LL+ AF+ + A
Sbjct: 72 CALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQ 131
Query: 123 -EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAX 181
EIS ++ VR + EL A G EG+V G++ D+++EGK ++++ELE IH HKT KLLE A
Sbjct: 132 KEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAV 191
Query: 182 XXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
+ E++ ++A+ IGL FQ+ DDILDV + +E+GK G D+ ++K+TY
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYT 251
Query: 242 KLMGIENARKFACDLLAQATEELAYFEV 269
L ++ A+ + +A+A + + ++
Sbjct: 252 TLFTVDRAKDILDETIAKAKDAIGSLQL 279
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 127/288 (44%), Positives = 171/288 (59%)
Query: 3 SKAKRVNKALDETVQLRHP--AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
S RV+ A+ P A+++EAMRYS++ GGKRVRP+L A+CE +GG A
Sbjct: 8 SSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANG 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACA+E+IH SLVHDDLP MD+DD RRG+PT HK F E AILAGD L SLAF +
Sbjct: 68 AACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDP 127
Query: 121 S-TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEA 179
+ ++ S + +R + L A G G+V G+ +D+ S G + LE +H HKT L+EA
Sbjct: 128 ALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEA 187
Query: 180 AXXXXXXXXX-XNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+ E++ ++ YA+ IGL FQV DDILDV + LGK G D+ DK
Sbjct: 188 SVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQ 286
TYP L+G+ A+++A +L QA L F+ A A PL LA YI R+
Sbjct: 248 TYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIVERR 294
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 126/270 (46%), Positives = 166/270 (61%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P IH+AM YSL AGGKR+RPVL +A+ E G +P A +E +HT SL+HDDLP
Sbjct: 28 YPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELG 137
MDNDDFRRGKPTNHKVFGE AILAGDALL+ AFE + AK+ E I +RVVR I EL
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQELA 146
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVER 197
A GSEGL+AG+++D+ S L IHL+KTA+L+ + E++
Sbjct: 147 VASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKA 206
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE +K A + +
Sbjct: 207 LDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEI 266
Query: 258 AQATEELA-YFEVARAAPLYHLAYYIASRQ 286
A L Y E +++ LA +I R+
Sbjct: 267 NAAKNVLKPYGE--KSSFFIKLAEFILKRE 294
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 126/270 (46%), Positives = 166/270 (61%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLP 79
+P IH+AM YSL AGGKR+RPVL +A+ E G +P A +E +HT SL+HDDLP
Sbjct: 28 YPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 80 CMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELG 137
MDNDDFRRGKPTNHKVFGE AILAGDALL+ AFE + AK+ E I +RVVR I EL
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQELA 146
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVER 197
A GSEGL+AG+++D+ S L IHL+KTA+L+ + E++
Sbjct: 147 VASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKA 206
Query: 198 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLL 257
+ Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE +K A + +
Sbjct: 207 LDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEI 266
Query: 258 AQATEELA-YFEVARAAPLYHLAYYIASRQ 286
A L Y E +++ LA +I R+
Sbjct: 267 NAAKNVLKPYGE--KSSFFIKLAEFILKRE 294
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 123/291 (42%), Positives = 172/291 (59%)
Query: 6 KRVNKALD---ETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVA 62
+R+N L E + + P K+ EAMRY LL GGKR+RP L + E V D + VA
Sbjct: 12 ERINDFLAAKLEGLTINDP-KLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVA 70
Query: 63 CALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKST 122
ALE IH SL+HDDLP MD+DD RRGKPT HK F E TAILAGDAL +LAF+ +A +
Sbjct: 71 GALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTF 130
Query: 123 EISPDRV-----VRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLL 177
++ V+ I +L A G +G+ G+ +D+ + GK++SL ELE +H KT LL
Sbjct: 131 SMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALL 190
Query: 178 EAAXXXXXXXXXXNMIEVERV-RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
EA+ E + + +YA+ IGL +QV DDI+D+T + +ELGK G D+ ++
Sbjct: 191 EASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAAN 250
Query: 237 KATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
K+TYP L+G++ A+ A +LL QA + L+ L A +I R H
Sbjct: 251 KSTYPALLGLQGAQDKAENLLQQALQALSRLPY-NTQSLADFATFIVKRSH 300
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 103/232 (44%), Positives = 147/232 (63%)
Query: 2 TSKAKRVNKALDETVQLRHPAKIHEAMRYSLLA-GGKRVRPVLCIASCELVGGDESSAMP 60
T+ +N+ LDE + ++HPA I+EAMRYS+LA G KR PV+C+A+CEL GGD +A P
Sbjct: 52 TTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFP 111
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
ACALEM+H SL+HDDLPCMD+D RRGKP+NH V+G AILAGDAL LAF+H+ +
Sbjct: 112 TACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSH 171
Query: 121 ST-EISPDR-VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ ++ P ++R I E+ VGS G+ AG+ +D+ EG L+ ++ K + E
Sbjct: 172 TPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLSFVQE---KKFGAMGE 226
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAG 230
+ E++ +R+Y R +G+L+QVVDDI + K S + G G
Sbjct: 227 CSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 123/286 (43%), Positives = 157/286 (54%)
Query: 6 KRVNKALDETVQLR--HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVAC 63
K+ N+AL + + E M+Y L GGKR+RP L A+ + G ++ A
Sbjct: 12 KQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAA 71
Query: 64 ALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKST 122
A+E IH SL+HDDLP MD+DD RRG PT H FGE AILAGDAL +LAF ++ A
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMP 131
Query: 123 EISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXX 182
E+S + I+EL SA G G+ G+ +D+D+EGK V L+ LE IH HKT L+ AA
Sbjct: 132 EVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVR 191
Query: 183 XXXXXXXXNMIEVERVR-KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
V KYA IGL FQV DDILDV + LGK G D K+TYP
Sbjct: 192 LGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 242 KLMGIENARKFACDLLAQATEELAYF--EVARAAPLYHLAYYIASR 285
L+G+E ARK A DL+ A + L + + L LA YI R
Sbjct: 252 ALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 114/287 (39%), Positives = 157/287 (54%)
Query: 1 MTSKAKRVNKALDETVQ-LRHP-AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T A +V ALD+ + P A + AMR++ LA GKR+RP + + + G E S
Sbjct: 8 LTEVADKVTVALDQLIPPASGPEANLMRAMRHAALANGKRMRPFFVLETGAMFGASEKSL 67
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
+ A ALE IH SLVHDDLPCMD+DDFRRG+PT HK F E TA+LAGDALL+LAF+ +A
Sbjct: 68 LRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAFKILA 127
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
+ T P V I L A G+ G+V G+++D+ E LN + + KT L+
Sbjct: 128 SSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLKTGALIS 187
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A E + +A +GL +Q+ DDILD +GK KD + KA
Sbjct: 188 YALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSKDKDAGKA 247
Query: 239 TYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASR 285
+ L+G++ AR+ L AQA E LA F +A L H Y+ +R
Sbjct: 248 NFVTLLGVDGARQRVRLLAAQAKEHLAIFR-DKAHILLHSVDYVLNR 293
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 112/292 (38%), Positives = 163/292 (55%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK---IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS 57
++S +R N+ LD+ + R P + + EAMRY LL GGKR RP L + +++G + S
Sbjct: 5 LSSYQQRNNQQLDQWLN-RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSD 63
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
A A+E IH SL+HDDLP MD+D+ RRGKPT H F E TAIL GDAL +LAF +
Sbjct: 64 LDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTIL 123
Query: 118 AAKSTEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A + + + V + L A G++G+ G+ +D+ +E + +SL ELE IH +KT L
Sbjct: 124 AEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGAL 183
Query: 177 LEAAXXXXXXXXXXN-MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+ A + + +YA +GL FQV DDILD+ ++ LGK G D
Sbjct: 184 MRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQEL 243
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+K+TYP L+G+E A++ A LL +A L L A Y+ R++
Sbjct: 244 NKSTYPALLGLEGAQQKAHTLLQEALLALEAIPY-NTEHLEEFARYVVERKN 294
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 112/292 (38%), Positives = 163/292 (55%)
Query: 1 MTSKAKRVNKALDETVQLRHPAK---IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESS 57
++S +R N+ LD+ + R P + + EAMRY LL GGKR RP L + +++G + S
Sbjct: 5 LSSYQQRNNQQLDQWLN-RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSD 63
Query: 58 AMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
A A+E IH SL+HDDLP MD+D+ RRGKPT H F E TAIL GDAL +LAF +
Sbjct: 64 LDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTIL 123
Query: 118 AAKSTEISPD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKL 176
A + + + V + L A G++G+ G+ +D+ +E + +SL ELE IH +KT L
Sbjct: 124 AEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGAL 183
Query: 177 LEAAXXXXXXXXXXN-MIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVS 235
+ A + + +YA +GL FQV DDILD+ ++ LGK G D
Sbjct: 184 MRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQEL 243
Query: 236 DKATYPKLMGIENARKFACDLLAQATEELAYFEVARAAPLYHLAYYIASRQH 287
+K+TYP L+G+E A++ A LL +A L L A Y+ R++
Sbjct: 244 NKSTYPALLGLEGAQQKAHTLLQEALLALEAIPY-NTEHLEEFARYVVERKN 294
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 108/290 (37%), Positives = 159/290 (54%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ A + ++ D + P I AM ++ GGKR+R L + S L DE+ A+
Sbjct: 6 LAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEARAIW 64
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+E +H SLVHDDLPCMD+DD RRG+PT H + E TA+LAGDAL SLAFE
Sbjct: 65 PATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRP 124
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHLHKTAKLLE 178
+ R A+ L A G+ G+V G+ +DI +E K ++L+++ + KT L+E
Sbjct: 125 EVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIE 183
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A + + +R+YAR +GL FQ+ DDILDV +++ GK KD + KA
Sbjct: 184 WAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKA 240
Query: 239 TYPKLMGIENARKFACDLLAQATEEL-AYFEVARAAPLYHLAYYIASRQH 287
T+ L+G++ A+ A DL+ Q L Y E RA L A ++ +R +
Sbjct: 241 TFVSLLGLDAAKARARDLVDQGCAALDGYGE--RAGTLKEAARFVIARDN 288
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 108/290 (37%), Positives = 159/290 (54%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
+ A + ++ D + P I AM ++ GGKR+R L + S L DE+ A+
Sbjct: 6 LAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEARAIW 64
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A A+E +H SLVHDDLPCMD+DD RRG+PT H + E TA+LAGDAL SLAFE
Sbjct: 65 PATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRP 124
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEG--KDVSLNELENIHLHKTAKLLE 178
+ R A+ L A G+ G+V G+ +DI +E K ++L+++ + KT L+E
Sbjct: 125 EVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIE 183
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A + + +R+YAR +GL FQ+ DDILDV +++ GK KD + KA
Sbjct: 184 WAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKA 240
Query: 239 TYPKLMGIENARKFACDLLAQATEEL-AYFEVARAAPLYHLAYYIASRQH 287
T+ L+G++ A+ A DL+ Q L Y E RA L A ++ +R +
Sbjct: 241 TFVSLLGLDAAKARARDLVDQGCAALDGYGE--RAGTLKEAARFVIARDN 288
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 97/264 (36%), Positives = 144/264 (54%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
++ AM + L GGKR+RP L + ++ G A A+E IH SL+HDDLP MD
Sbjct: 30 QLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMD 89
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
+D RRG+PT H F E TAILAGDAL +LAFE V I+ ++ + + L A G
Sbjct: 90 DDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGITSEQHIAMVRALAKASGY 149
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYA 202
G+ G+ +D+ S K + L L +H KT L+ A + + + ++A
Sbjct: 150 RGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELALIAANAPKDQYQTMMEFA 209
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATE 262
+GL FQV DDILD+ +++ELGK G D S+K+T+P+L+G++ A+ A L+ +A
Sbjct: 210 HAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTATQLIQEALS 269
Query: 263 ELAYFEVARAAPLYHLAYYIASRQ 286
LA + + A YI R+
Sbjct: 270 ALAKLPY-NSQLIADFARYIIERR 292
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 100/250 (40%), Positives = 141/250 (56%)
Query: 16 VQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDE-SSAMPVACALEMIHTMSLV 74
V+ HP +EA+ L AGGK R L ++ + + + A+ VA ALE IHT SL+
Sbjct: 18 VESFHPF-FNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLI 76
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDDLP MDN DFRRG PT HK + E TAIL GDAL + AF + + + ++ I
Sbjct: 77 HDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAF--LVLSHAHLKDEIKIKLIK 134
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIE 194
L G G+V G+ +D E K +SLNELE +H HKTA+L+ AA N E
Sbjct: 135 TLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEE 194
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
++ K +GL+FQ+ DDI+DVT S ++ GK D+ K ++ L+G+E A K
Sbjct: 195 SNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDI--HKNSFVNLLGLEQAIKTKE 252
Query: 255 DLLAQATEEL 264
+LL + ++L
Sbjct: 253 NLLNECEQDL 262
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 87/228 (38%), Positives = 133/228 (58%)
Query: 1 MTSKAKRVNKALDETV-QLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T +R+N L + +R P ++HEAM Y++++GGKR+RP+ A+ D +
Sbjct: 4 ITIYQERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQI 63
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
ACA+E++H SLVHDDLP MD+DDFRRGKP+ HK F E TAIL GDAL LAFE V
Sbjct: 64 DNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFE-VL 122
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A+ D+ +R I L +A GS G+ G+ +D++ + K+ + ++E +H KT L
Sbjct: 123 AR------DKNIRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 179 AAXXXXXXXXX-XNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKEL 225
A + ++++RK +GL+FQ DD+ D T +++
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKI 224
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 87/228 (38%), Positives = 133/228 (58%)
Query: 1 MTSKAKRVNKALDETV-QLRH-PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSA 58
+T +R+N L + +R P ++HEAM Y++++GGKR+RP+ A+ D +
Sbjct: 4 ITIYQERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQI 63
Query: 59 MPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA 118
ACA+E++H SLVHDDLP MD+DDFRRGKP+ HK F E TAIL GDAL LAFE V
Sbjct: 64 DNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFE-VL 122
Query: 119 AKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLE 178
A+ D+ +R I L +A GS G+ G+ +D++ + K+ + ++E +H KT L
Sbjct: 123 AR------DKNIRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 179 AAXXXXXXXXX-XNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKEL 225
A + ++++RK +GL+FQ DD+ D T +++
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKI 224
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 353 (129.3 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 93/250 (37%), Positives = 137/250 (54%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVG--------------- 52
VN+A+ E + ++ P +++ A RY L AGGKR+RP + + + E +
Sbjct: 18 VNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSL 77
Query: 53 -GDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLS 111
GDE + A ++E+I + +L+HDD+ MD+DD RRG P H+ + +TAILAGD L S
Sbjct: 78 PGDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLETAILAGDTLYS 135
Query: 112 LAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNE-LENIH 169
AFE++ T +R V A+ EL + +E + G+ +D+D E + DV+ E LE +
Sbjct: 136 KAFEYML--DTGAPAERSVEALDELATTC-TE-ICEGQALDVDFENRSDVTTEEYLEMVE 191
Query: 170 LHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 229
KTA L AA + VE + Y IG FQ+ DD+LD+T S ELGK
Sbjct: 192 F-KTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELGKQR 250
Query: 230 GKDLVSDKAT 239
G DLV +K T
Sbjct: 251 GSDLVENKRT 260
Score = 38 (18.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 246 IENARKFACDLLAQATEELAYFEVARAAPLYH-LAYYIASRQH 287
I+ AR+ A DL+ E L A L +A ++ R +
Sbjct: 299 IDFAREMALDLVTSGKERLDVLPENEARQLLEDIADFLVERSY 341
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 76/198 (38%), Positives = 117/198 (59%)
Query: 27 AMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDF 86
+MRYS+ A GK +RP L AS ++ + +PV+ A+E+IH SL+HDDLP +DN++
Sbjct: 27 SMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNENI 86
Query: 87 RRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLV 146
RRG+ ++HK F E AIL GDALL+LAFE ++ + + SP I L A+G +G++
Sbjct: 87 RRGQASSHKKFNEAIAILTGDALLTLAFEILS--TIDESPFIRCCMIKALAKALGYQGMI 144
Query: 147 AGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIG 206
G+I+D ++ KD N+++ IH+ KTA+ A + IE+ + Y +G
Sbjct: 145 QGQILDTETIAKDT--NDIQAIHVLKTAQFFSVACELGGILGNASNIELNALANYGLNLG 202
Query: 207 LLFQVVDDILDVTKSSKE 224
FQV DDI D + +
Sbjct: 203 HAFQVKDDIADANQDKSK 220
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 71/233 (30%), Positives = 129/233 (55%)
Query: 19 RHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
+H I E +++ + +GGKR+RP++ C+++ + + +P+A A+E+IH +L+HDD+
Sbjct: 33 KHITLITEIVQHLIKSGGKRIRPIIFFIICKMLNCNNENKVPIAAAIELIHNATLLHDDV 92
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEH-VAAKSTEISPDRVVRAIAELG 137
+D + RRG+ T++ ++G +IL GD LL+++F+ + K+ I ++ L
Sbjct: 93 --IDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLIKCKNLNI--------LSILS 142
Query: 138 SAVGSEGLVAGEIMD-IDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVE 196
A S+ ++ GE+ I S ++S + I KTA L A + E E
Sbjct: 143 QA--SKDVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANLAQTSNEEKE 200
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA 249
++ + G+ FQ++DDILD T S ++ GK G DL++ K T P ++ +NA
Sbjct: 201 ALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNA 253
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 88/262 (33%), Positives = 141/262 (53%)
Query: 21 PAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG--DESSAMPVACALEMIHTMSLVHDDL 78
P ++ A + + AGGKR+RP++ + + ++GG E+ A+P+A ++E HT SL+HDD+
Sbjct: 15 PDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI 74
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVA-AKSTEISPDRVVRAIAELG 137
MD D+ RRG PT H V+G+D AILAGD L + AF+ +A ++ +S ++ RA L
Sbjct: 75 --MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLS 132
Query: 138 SAVGSEGLVAGEIMD-IDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVE 196
A + G+ D + E DV + + N+ KT L+EAA E+E
Sbjct: 133 EAAIQ--ISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGS-EIE 189
Query: 197 RVR-KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA-RKFAC 254
++ + G+ FQ+ DDIL V K GK DL K T + ++ A R+
Sbjct: 190 KMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGRREIV 249
Query: 255 DLLA-QATEELAYFEVARAAPL 275
DL+ +A+E+ ++ RAA +
Sbjct: 250 DLIGPKASED----DLKRAASI 267
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 291 (107.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 78/207 (37%), Positives = 108/207 (52%)
Query: 36 GKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHK 95
GK +RP L + E G D SA+P A ++E++H SLVHDDL MD D+ RR +PT
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129
Query: 96 VFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDS 155
++G+ A+LAGDA+LSLA E V +RAI+E + L+ G+ D
Sbjct: 130 LWGDAMALLAGDAMLSLAHE-VLLDCDSPHVGAALRAISE-----ATRELIRGQAADTAF 183
Query: 156 EGK-DVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDD 214
E + DV+L+E + KTA L+ A+ E + Y R IGL FQ+VDD
Sbjct: 184 ESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDD 243
Query: 215 ILDVTKSSKELGKTAGKDLVSDKATYP 241
+L + + GK DL S K T P
Sbjct: 244 LLGIWGRPEITGKPVYSDLRSRKKTLP 270
Score = 40 (19.1 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 272 AAPLYHLAYYIASRQ 286
AA L LA+YI RQ
Sbjct: 344 AAELQDLAHYIVDRQ 358
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 74/237 (31%), Positives = 129/237 (54%)
Query: 16 VQLRHPAK--IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSL 73
V+ RH I + +++ +L+GGKR RPV+ +A+C ++G ++ + VA A+E +H+ +L
Sbjct: 17 VKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATL 76
Query: 74 VHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAI 133
+HDD+ +D D RRG T + ++G +IL GD L + AF+ + + ++ ++ +
Sbjct: 77 LHDDV--VDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIVSCNS-------IQLL 127
Query: 134 AELGSAVGSEGLVAGEIMD-IDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNM 192
+ L + +V+GE+ + S D+S + I KTA L AA
Sbjct: 128 SVLSNTASI--IVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDVGT 185
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENA 249
++ +R + G++FQ++DDILD T + ELGK D+VS K T P ++ E A
Sbjct: 186 LQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGA 242
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 75/257 (29%), Positives = 135/257 (52%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGG-KRVRPVLCIASCELVGGDESSAMPVACALE 66
VN A+ E QL ++ + Y +++GG KR+RP++ + + VG + ++ + +A +E
Sbjct: 17 VNAAILE--QLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIE 74
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
IHT +L+HDD+ +D D RRGK T + FG ++L GD + + AF+ + T +
Sbjct: 75 FIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMM----TSLGS 128
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXX 186
+V+ ++E + + +EG V ++M+++ D++ + KTA+L EAA
Sbjct: 129 LKVLEVMSEAVNVI-AEGEVL-QLMNVNDP--DITEENYMRVIYSKTARLFEAAAQCSGI 184
Query: 187 XXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
E + ++ Y R +G FQ++DD+LD ++LGK G DL K T P L +
Sbjct: 185 LAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAM 244
Query: 247 ENARKFACDLLAQATEE 263
+ ++ A E+
Sbjct: 245 HHGTPEQAQMIRTAIEQ 261
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 77/242 (31%), Positives = 125/242 (51%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCM 81
A I++ Y + GGKR+RP+L + + V + + +A +E IHT SL+HDD+ +
Sbjct: 38 ALINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--V 95
Query: 82 DNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVG 141
D RRG+ T + +FG ++L GD L + +F+ + TE+ RV+R +A+ + +
Sbjct: 96 DESTLRRGRETANALFGNSASVLVGDFLYTRSFQMM----TELDSMRVLRVLADTTNVL- 150
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKY 201
+EG V ++M+ + D + + KTAKL EAA + + + Y
Sbjct: 151 AEGEVL-QLMNCNDP--DTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDY 207
Query: 202 ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQAT 261
+ +G FQ+ DD+LD T S ELGK G DL K T P + I + + L+ QA
Sbjct: 208 GKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEEKQLIRQAI 267
Query: 262 EE 263
E+
Sbjct: 268 EQ 269
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 75/256 (29%), Positives = 134/256 (52%)
Query: 12 LDETV--QLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMI 68
++ET+ QL I++ Y + GGKR+RP+L + S + +G S A +E I
Sbjct: 42 VNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFI 101
Query: 69 HTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDR 128
HT +L+HDD+ +D D RRGK T + FG ++L GD + + +F+ + TE+ +
Sbjct: 102 HTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELGSMK 155
Query: 129 VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXX 188
+++ +++ + + +EG V ++M+ + D + + KTA+L EAA
Sbjct: 156 ILKLMSDAVNVI-AEGEVQ-QLMNCNDP--DTTEASYMQVIYSKTARLFEAATQIGAILC 211
Query: 189 XXNMIEVE-RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ EVE ++ Y + +G FQ++DD++D T E+GK G DL K T P L ++
Sbjct: 212 DASP-EVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQ 270
Query: 248 NARKFACDLLAQATEE 263
+ ++ +A E+
Sbjct: 271 HGNPEQAAMIREAIEK 286
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 75/256 (29%), Positives = 134/256 (52%)
Query: 12 LDETV--QLRHPAK-IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMI 68
++ET+ QL I++ Y + GGKR+RP+L + S + +G S A +E I
Sbjct: 42 VNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFI 101
Query: 69 HTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDR 128
HT +L+HDD+ +D D RRGK T + FG ++L GD + + +F+ + TE+ +
Sbjct: 102 HTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELGSMK 155
Query: 129 VVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXX 188
+++ +++ + + +EG V ++M+ + D + + KTA+L EAA
Sbjct: 156 ILKLMSDAVNVI-AEGEVQ-QLMNCNDP--DTTEASYMQVIYSKTARLFEAATQIGAILC 211
Query: 189 XXNMIEVE-RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ EVE ++ Y + +G FQ++DD++D T E+GK G DL K T P L ++
Sbjct: 212 DASP-EVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQ 270
Query: 248 NARKFACDLLAQATEE 263
+ ++ +A E+
Sbjct: 271 HGNPEQAAMIREAIEK 286
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 73/238 (30%), Positives = 121/238 (50%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
K + K ++ V A + +A+ Y +L GK +R L + + G +P+ A+
Sbjct: 19 KELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E++H+ SLVHDDLP MDN RRGK + H GE A+L GDALL+L FE +++ +
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESCT 138
Query: 126 PD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXX 184
++R I++ A G G+VAG+ +D+ + + SL ++ IH KTA+L AA
Sbjct: 139 VKCAIIRVISD---ACGHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLFSAACESG 193
Query: 185 XXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTK--SSKELGKTAGKDLVSDKATY 240
+ + + Y +G FQ DD+ D+ + S + + G++ + Y
Sbjct: 194 AILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGREKTLEYIDY 251
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 73/238 (30%), Positives = 121/238 (50%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
K + K ++ V A + +A+ Y +L GK +R L + + G +P+ A+
Sbjct: 19 KELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E++H+ SLVHDDLP MDN RRGK + H GE A+L GDALL+L FE +++ +
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESCT 138
Query: 126 PD-RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXX 184
++R I++ A G G+VAG+ +D+ + + SL ++ IH KTA+L AA
Sbjct: 139 VKCAIIRVISD---ACGHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLFSAACESG 193
Query: 185 XXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTK--SSKELGKTAGKDLVSDKATY 240
+ + + Y +G FQ DD+ D+ + S + + G++ + Y
Sbjct: 194 AILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGREKTLEYIDY 251
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 75/255 (29%), Positives = 134/255 (52%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
VN + + +Q A I++ Y + GGKR+RP+L + + + +A +E
Sbjct: 21 VNDLIYDQLQ-SDVALINQLGIYIVNGGGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEF 79
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IHT +L+HDD+ +D + RRG+ T + +FG ++L GD L + +F+ + T++
Sbjct: 80 IHTATLLHDDV--VDESNMRRGRETANALFGNSASVLVGDFLYTRSFQMM----TKLGDM 133
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXX 187
R++ ++E + V +EG V ++M+ + + + ++ I+ KTAKL EAA
Sbjct: 134 RIMDILSEATNIV-AEGEVL-QLMNCN-DASTTEESYMQVIYC-KTAKLFEAATRLAAVI 189
Query: 188 XXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ + + Y + +G FQ+VDDI+D T +KE+GK G DL K T P L ++
Sbjct: 190 AKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMK 249
Query: 248 NARKFACDLLAQATE 262
+ + L+ +A E
Sbjct: 250 HGNEAQQKLIKEAIE 264
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 84/250 (33%), Positives = 129/250 (51%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI----ASCELVGGDESSA--M 59
+R+N L V +P I A + AGGKR+RP L A+ EL G E +
Sbjct: 107 QRLNDNLLSIVGAENPVLISAAEQI-FSAGGKRMRPGLVFLVSRATAELAGLKELTVEHR 165
Query: 60 PVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA 119
+ +EMIHT SL+HDD+ +D D RRG+ T H++FG A+LAGD + + A ++A
Sbjct: 166 RLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLA- 222
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLE 178
+ V++ I+++ + +GEI S DV L++ +KTA L+
Sbjct: 223 ---NLENLEVIKLISQV-----IKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 274
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
A+ E++ ++ + +GL FQVVDDILD T+S+++LGK A DL
Sbjct: 275 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 334
Query: 239 TYPKLMGIEN 248
T P + +EN
Sbjct: 335 TAPVIFALEN 344
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 84/247 (34%), Positives = 127/247 (51%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI----ASCELVGGDESSA--MPV 61
+N L V +P I A + AGGKR+RP L A+ EL G E + +
Sbjct: 98 LNDNLLSIVGAENPVLISAAEQI-FGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRL 156
Query: 62 ACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKS 121
A +EMIHT SL+HDD+ +D D RRGK T H++FG A+LAGD + + A ++A
Sbjct: 157 AEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLA--- 211
Query: 122 TEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNELENIHLHKTAKLLEAA 180
+ V++ I+++ + +GEI S D L+E +KTA L+ A+
Sbjct: 212 -NLENLEVIKLISQV-----IKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAS 265
Query: 181 XXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
E++ ++ + +GL FQ+VDDILD T+S+++LGK AG DL T
Sbjct: 266 TKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTA 325
Query: 241 PKLMGIE 247
P + +E
Sbjct: 326 PVIFALE 332
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 82/258 (31%), Positives = 123/258 (47%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V K L E +Q I++A + L +GGKRVRP+ + S L + + A +LE+
Sbjct: 17 VEKRLYECIQ-SDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLEL 75
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
+H SLVHDD +DN D RRG + H F +DTAI G LL+ A +++A +
Sbjct: 76 VHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQ 133
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-LENIHLHKTAKLLEAAXXXXXX 186
+ I E+ G +A D VS L I+ KTA L+EA+
Sbjct: 134 IFSKTILEV--CFGEFDQMA------DRFNYPVSFTAYLRRIN-RKTAILIEASCHLGAL 184
Query: 187 XXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
+ ++++ CIG+ +Q++DDILD T LGK G D+ + TYP + I
Sbjct: 185 SSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAI 244
Query: 247 ENARKFACDLLAQATEEL 264
N ++ D L + L
Sbjct: 245 ANLKEQDDDKLEAVVKHL 262
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 71/221 (32%), Positives = 117/221 (52%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I + Y L +GGKR+RP+L + S +L G +P+A +E IHT +L+HDD+ +DN
Sbjct: 30 IRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDN 87
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSE 143
RRG + ++V+G + ++L GD L S +F + E R+++ I+ G+
Sbjct: 88 ATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMV----EAGDLRILKVIS------GAT 137
Query: 144 GLVA-GEIMDIDSEGKDVSLNELENIHL--HKTAKLLEAAXXXXXXXXXXNMIEVERVRK 200
++A GE++ + D+ + + I + KTA LL AA + + E +R
Sbjct: 138 TIIAEGEVLQLLCTS-DLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRD 196
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
+ +G+ FQ++DD LD T S ++ GK G DL K T P
Sbjct: 197 FGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLP 237
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 78/249 (31%), Positives = 118/249 (47%)
Query: 34 AGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTN 93
+ GK R L A+ GGD A PV+ A+E++H +L+HDD+ MD D RRG+PT
Sbjct: 67 SSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTV 124
Query: 94 HKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDI 153
V+G AIL GDAL + A + + E VRAI L + L G+ D
Sbjct: 125 WSVWGVGVAILLGDALHATAVRILTGLTDECV---AVRAIRRL--QMSCLDLCIGQFEDC 179
Query: 154 DSEGK-DVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVV 212
EG+ +V++++ + KTA L + + + ++ +GL FQ V
Sbjct: 180 LLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCV 239
Query: 213 DDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA--QATEELAYFEVA 270
DD++ + GK G DL KAT P + + + + A +L A QA + +V
Sbjct: 240 DDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVE 299
Query: 271 RAAPLYHLA 279
RA L +A
Sbjct: 300 RATALVKVA 308
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 90/270 (33%), Positives = 131/270 (48%)
Query: 10 KALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIH 69
K + E+ + P ++ E + Y +L GGK +RP L + S G +P+A + EM+H
Sbjct: 23 KLVSESRKQSFP-EMAEMLDY-ILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLH 80
Query: 70 TMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV 129
+LVHDD +D D RR + T + V+G + AIL GD L F H A + E R+
Sbjct: 81 IATLVHDD--AIDKADTRRSRRTVNSVWGLEKAILLGDFL----FAHAAEVAAETDNMRI 134
Query: 130 VRAIAELGSAVGSEGLVAGEIMDI-DSEGKDVSL-NELENIHLHKTAKLLEAAXXXXXXX 187
V A+ + S GE+ S D S N LE I KTA L A
Sbjct: 135 VTLFAQTLQIIAS-----GELKQAYASFNPDQSYENYLERIS-GKTAALFVMATKGGAIL 188
Query: 188 XXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ + E +R Y +GL FQ+VDDILD ++K++GK G DL + T P L+ ++
Sbjct: 189 ADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMD 248
Query: 248 N--ARKFACDLLAQATEELAYFEVARAAPL 275
D+L AT+ A+ VARA +
Sbjct: 249 RYPENNPIKDMLG-ATDRSAH--VARAVEM 275
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 77/246 (31%), Positives = 125/246 (50%)
Query: 7 RVNKALDETVQLRHPAKI-HEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACA- 64
RV + +D +LR ++ +++ + AGGKR RP+ + S ++ +++A+ VA A
Sbjct: 28 RVEQLMD--TELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAV 85
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIH +L HDD+ MD RRG P+ + +G + AILAGD LL+ A VA +
Sbjct: 86 IEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVA----RL 139
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDV-SLNELENIHLHKTAKLLEAAXXX 183
P+ VR IA+ + LV G++ + ++V S+ + + KT L+ AA
Sbjct: 140 GPE-AVRIIADTFAQ-----LVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRL 193
Query: 184 XXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+VER+ + +G FQ+ DDI+D+ S E GK G D+ T P L
Sbjct: 194 GGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPML 253
Query: 244 MGIENA 249
+ +
Sbjct: 254 YALRES 259
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 81/245 (33%), Positives = 119/245 (48%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V + L+ VQ + + EA + L AGGKR+RPV + + D VA ALE+
Sbjct: 17 VEEELERAVQSEY-GPLGEAALHLLQAGGKRIRPVFVLLAARFGQYDLERMKHVAVALEL 75
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IH SLVHDD+ +D+ D RRG+PT + A+ GD L + + E +A E+
Sbjct: 76 IHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMA----ELGNP 129
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGK-DVSLNE-LENIHLHKTAKLLEAAXXXXX 185
R + +A+ V GEI I + + D L L I KTA L+ A+
Sbjct: 130 RAHQVLAKTIVEV-----CRGEIEQIKDKYRFDQPLRTYLRRIR-RKTALLIAASCQLGA 183
Query: 186 XXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
V+R+ + +G+ FQ+ DDILD T + ++LGK AG DL+ T P L
Sbjct: 184 LAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYA 243
Query: 246 IENAR 250
+ + R
Sbjct: 244 LSDER 248
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 75/248 (30%), Positives = 124/248 (50%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+++ + L + V R+ +H+ + L AGGKR+RP + + +L D P+A AL
Sbjct: 20 RKIEQELIKEVSERNEF-LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVAL 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E+IH +LVHDD+ +DN RRG PT +G +I GD + + + + +
Sbjct: 79 ELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNY- 135
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELEN-IHL-HKTAKLLEAAXXX 183
V + +AE+ S + GEI ++ K++S + + I + KTA LL A+
Sbjct: 136 ---VAKVLAEV-----SVKMTTGEIQQLNG-AKNISTSIKDYLIKIKRKTALLLSASCEL 186
Query: 184 XXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ V +++Y +G+ FQ++DDILD T K LGK G DL T P L
Sbjct: 187 GGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Query: 244 MGIENARK 251
+ ++ +K
Sbjct: 247 LALKRDKK 254
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 75/248 (30%), Positives = 124/248 (50%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACAL 65
+++ + L + V R+ +H+ + L AGGKR+RP + + +L D P+A AL
Sbjct: 20 RKIEQELIKEVSERNEF-LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVAL 78
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
E+IH +LVHDD+ +DN RRG PT +G +I GD + + + + +
Sbjct: 79 ELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNY- 135
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELEN-IHL-HKTAKLLEAAXXX 183
V + +AE+ S + GEI ++ K++S + + I + KTA LL A+
Sbjct: 136 ---VAKVLAEV-----SVKMTTGEIQQLNG-AKNISTSIKDYLIKIKRKTALLLSASCEL 186
Query: 184 XXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
+ V +++Y +G+ FQ++DDILD T K LGK G DL T P L
Sbjct: 187 GGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Query: 244 MGIENARK 251
+ ++ +K
Sbjct: 247 LALKRDKK 254
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 68/251 (27%), Positives = 120/251 (47%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + VN + + H +I E + + AGGKR+RP+L +A+ L G +
Sbjct: 17 LSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVK 76
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+A +E IHT +L+HDD+ +D RRG+PT + ++ +++L GD L + +F+ +
Sbjct: 77 LAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV-- 132
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHL--HKTAKLLE 178
E RV+ +A + + GE++ + + D+ +E + + KTA L
Sbjct: 133 --ETGSLRVLDILANAAATIAE-----GEVLQMTA-ASDLRTDESVYLQVVRGKTAALFS 184
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA +V + +Y +G+ FQ+ DD+LD +K GK G D K
Sbjct: 185 AATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKL 244
Query: 239 TYPKLMGIENA 249
T P + + A
Sbjct: 245 TLPVIKAVAQA 255
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 68/251 (27%), Positives = 120/251 (47%)
Query: 1 MTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
++ + VN + + H +I E + + AGGKR+RP+L +A+ L G +
Sbjct: 17 LSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVK 76
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+A +E IHT +L+HDD+ +D RRG+PT + ++ +++L GD L + +F+ +
Sbjct: 77 LAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV-- 132
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHL--HKTAKLLE 178
E RV+ +A + + GE++ + + D+ +E + + KTA L
Sbjct: 133 --ETGSLRVLDILANAAATIAE-----GEVLQMTA-ASDLRTDESVYLQVVRGKTAALFS 184
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
AA +V + +Y +G+ FQ+ DD+LD +K GK G D K
Sbjct: 185 AATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKL 244
Query: 239 TYPKLMGIENA 249
T P + + A
Sbjct: 245 TLPVIKAVAQA 255
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 82/260 (31%), Positives = 130/260 (50%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ + L++TV+ +P + EA + L AGGKR+RPV + S D + VA LEM
Sbjct: 45 IERELEQTVRSDYPL-LSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEM 103
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
IH SLVHDD+ +D+ + RRGKPT + A+ GD +L+ + E + T I+
Sbjct: 104 IHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM----TRINEP 157
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDI-DSEGKDVSLNE-LENIHLHKTAKLLEAAXXXXX 185
+ R +++ V GEI I D + +L L I KTA L+ +
Sbjct: 158 KAHRILSQTIVEV-----CLGEIEQIKDKYNMEQNLRTYLRRIK-RKTALLIAVSCQLGA 211
Query: 186 XXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
+ + + + +G+ +Q++DDILD T + +ELGK G DL+ T P L
Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 271
Query: 246 IEN-ARKFACDLL-AQATEE 263
++N A K L+ ++ T+E
Sbjct: 272 LKNPALKNQLKLINSETTQE 291
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 76/253 (30%), Positives = 128/253 (50%)
Query: 2 TSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELV-GGDESSAMP 60
+ K + V + L +++ K E + +L+ GKR+R +L + S L D ++ +
Sbjct: 12 SEKLRSVEEVLHDSMTTFTKLKSIEYAK-KMLSSGKRIRALLSLLSFALCKNADTNAEIR 70
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
A +E+IH +L+HDD+ +D + RRGKP + G ++L GD LLS+AFE + +
Sbjct: 71 AAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFE-IILE 127
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
+S VV +++ + SEG E++ + S G+ VS +E + KTA L AA
Sbjct: 128 CKNLS---VVLLLSKTAKQL-SEG----EMLQLQSIGEIVSESEYLEVIARKTAVLFSAA 179
Query: 181 XXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATY 240
V +R+ IG+ FQ+ DD+LD + +E+GK+ G D K T
Sbjct: 180 AEIAAILTGKQEYVVI-LREIGFLIGMAFQITDDVLDYGEP-QEVGKSVGNDFRECKFTL 237
Query: 241 PKLMGIENARKFA 253
P ++ +A+ A
Sbjct: 238 PCVIAYRDAKSKA 250
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/217 (33%), Positives = 110/217 (50%)
Query: 4 KAKR-VNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
KA R + + L E + L P+ K+ +A+RYSLLA +R L + L +
Sbjct: 9 KASRLIRETLKENLSL-FPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTIE 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VA A+EMIH+ SL+HDDLP +DN D RR +P H F E TAILAGDALL LA++ ++
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLSRY 127
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
T P + + S E ++ G++ D+ ++ +E+ + K+ L +
Sbjct: 128 GT---P------LVQCTSKYVLE-MITGQVHDVIGSST-LTADEINKM---KSGSLFALS 173
Query: 181 XXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILD 217
E+ + + IG++FQ VDDI D
Sbjct: 174 CSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 82/244 (33%), Positives = 121/244 (49%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP-VACALE 66
+ K L +TV P + EA + AGGKR+RPV + + + G + A+ VA ALE
Sbjct: 17 IEKELKKTVASEQPL-VEEAALQLIEAGGKRIRPVFVLLAGKF-GDYKLDAIKHVAVALE 74
Query: 67 MIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISP 126
+IH SLVHDD+ +D RRG T + +G+ A+ GD L + + E + + EI P
Sbjct: 75 LIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECIT--NIEI-P 129
Query: 127 DRVVRAIAELGSAVGSEGLVAGEIMDI-DSEGKDVSLNE-LENIHLHKTAKLLEAAXXXX 184
+ A L + + GEI I D D +L L I KTA L+ A+
Sbjct: 130 E----AHQALSHTILE--VCKGEIEQIKDKYNYDQNLRTYLRRIK-RKTALLIAASCQLG 182
Query: 185 XXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLM 244
N V R+ Y +G+ +Q++DDILD + ++LGK AG DL+ T P L
Sbjct: 183 AIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALY 242
Query: 245 GIEN 248
+E+
Sbjct: 243 AMED 246
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/217 (33%), Positives = 110/217 (50%)
Query: 4 KAKR-VNKALDETVQLRHPA--KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMP 60
KA R + + L E + L P+ K+ +A+RYSLLA +R L + L +
Sbjct: 9 KASRLIRETLKENLSL-FPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTIE 67
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
VA A+EMIH+ SL+HDDLP +DN D RR +P H F E TAILAGDALL LA++ ++
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLSRY 127
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAA 180
T P + + S E ++ G++ D+ ++ +E+ + K+ L +
Sbjct: 128 GT---P------LVQCTSKYVLE-MITGQVHDVIGSST-LTADEINKM---KSGSLFALS 173
Query: 181 XXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILD 217
E+ + + IG++FQ VDDI D
Sbjct: 174 CSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 67/242 (27%), Positives = 121/242 (50%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDES-SAMPVACALEMIHTMSLVHDDL 78
H I + + +GGKR+RP++ + + G ++ +A +E IHT +L+HDD+
Sbjct: 37 HVPLIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELATVIEFIHTATLLHDDV 96
Query: 79 PCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGS 138
+D RRG+ T + ++G ++L GD L S AF+ +A +S P +++ +A +
Sbjct: 97 --VDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNV--P--IMKILATTTN 150
Query: 139 AVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERV 198
+ SEG V + D + +V+ E+ KTA+L AA N + +
Sbjct: 151 QI-SEGEVWQLMNQNDPDIDEVTYYEVIR---RKTAQLFSAAAEIGAIVATKNETWQKSM 206
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLA 258
+ +G+ +Q++DD+LD +K + L K G DL KAT P + + A+ + +
Sbjct: 207 AAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQAQPAQAEHIR 266
Query: 259 QA 260
+A
Sbjct: 267 EA 268
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 81/223 (36%), Positives = 112/223 (50%)
Query: 36 GKRVRPVLCIA---SCELVGGDESSAMP----VACALEMIHTMSLVHDDLPCMDNDDFRR 88
GK RP++ I +C + E +P +A EMIHT SLVHDD+ +D+ D RR
Sbjct: 129 GKAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRR 186
Query: 89 GKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAG 148
GK T + V+GE AILAGD +LS A +A I VV ++++ E LV G
Sbjct: 187 GKNTINNVWGERKAILAGDFILSAASMALA----RIGNTTVVSVLSQV-----IEDLVRG 237
Query: 149 EIMDIDSEGKDVSLNELENIHLHKTAKLLEA--AXXXXXXXXXXNMI-EVERVR-KYARC 204
E M + S+ + NE +L KT K + A N EV + +Y R
Sbjct: 238 EFMQLGSKENE---NERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRN 294
Query: 205 IGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+G+ FQ+VDDILD T ++ LGK + DL AT P L +
Sbjct: 295 VGIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFACQ 337
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 240 (89.5 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 72/235 (30%), Positives = 115/235 (48%)
Query: 22 AKIHEAMRYSLLAGGKRVRPVLCIA---SCELVGGD----ESSAMPVACALEMIHTMSLV 74
A++ E Y GK RP++ + +C + + ++S +A EMIHT SLV
Sbjct: 122 AELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLV 181
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDD+ +D+ RRGK T +K++GE A+LAGD +LS A +A I V+ +
Sbjct: 182 HDDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA----RIGNTTVISILT 235
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNM 192
++ E LV GE + + S+ + + LE KTA L+ + +
Sbjct: 236 QV-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDP 289
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
E +Y + +G+ FQ++DD+LD T S+++GK DL AT P L +
Sbjct: 290 AVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQ 344
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 213 (80.0 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 65/189 (34%), Positives = 93/189 (49%)
Query: 57 SAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEH 116
S + +A EMIH SL+HDD+ +D+ + RRG P+++ FG +ILAG+ +L+ A
Sbjct: 118 SQLRLAQITEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTA 175
Query: 117 VAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDS-EGKDVSLNE-LENIHLHKTA 174
+A + + IA+L V E L MD S E K + + +E L KTA
Sbjct: 176 MARLRNPQVTELLATVIADL---VRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFL-KTA 231
Query: 175 KLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLV 234
L+ + + +Y RCIG FQ++DD+LD T LGK AG DL
Sbjct: 232 SLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLK 291
Query: 235 SDKATYPKL 243
AT P L
Sbjct: 292 LGLATAPVL 300
Score = 44 (20.5 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCI 45
+ E +Y +A GK++RP L +
Sbjct: 59 LEECSKYYTIAQGKQMRPSLVL 80
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 236 (88.1 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 71/234 (30%), Positives = 114/234 (48%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIA---SCELVGGD----ESSAMPVACALEMIHTMSLVH 75
++ E Y GK RP++ + +C + + ++S +A EMIHT SLVH
Sbjct: 70 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVH 129
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DD+ +D+ RRGK T +K++GE A+LAGD +LS A +A I V+ + +
Sbjct: 130 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALA----RIGNTTVISILTQ 183
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNMI 193
+ E LV GE + + S+ + + LE KTA L+ + + +
Sbjct: 184 V-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDPV 237
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
E +Y + +G+ FQ++DD+LD T S ++GK DL AT P L +
Sbjct: 238 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 291
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 235 (87.8 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 71/234 (30%), Positives = 115/234 (49%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIA---SCELVGGD----ESSAMPVACALEMIHTMSLVH 75
++ + Y GK RP++ + +C + + ++S +A EMIHT +LVH
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 173
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DD+ +D+ RRGK T +K++GE A+LAGD +LS A +A I VV +A+
Sbjct: 174 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA----RIGNTAVVSMLAQ 227
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNMI 193
+ E LV GE + + S+ + + LE KTA L+ + + +
Sbjct: 228 V-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDPV 281
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
E +Y + +G+ FQ++DD+LD T S ++GK DL AT P L +
Sbjct: 282 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQ 335
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 74/228 (32%), Positives = 115/228 (50%)
Query: 31 SLLAGGKRVRPVLCIASCELVGGDESS-AMPVACALEMIHTMSLVHDDLPCMDNDDFRRG 89
S + GK++R L + DES A + A+E+IH SL+HDD+ +D + RRG
Sbjct: 25 SNVKSGKKLRSKLLLTIA-----DESEIAFKICAAIELIHLASLLHDDI--IDESELRRG 77
Query: 90 KPTNHKVFGEDTAILAGDALLSLAFEHVA---AKSTEISPDRVVRAIAELGSAVGSEGLV 146
+ + FG A++ GD L S AF ++ A+ I D VV+ L
Sbjct: 78 ARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFASIISDAVVK-------------LA 124
Query: 147 AGEIMDIDSEGKDVSLNE---LENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYAR 203
GE+MD+D G+ ++N+ L+ I+ +KTA L+EA+ + E + +Y +
Sbjct: 125 IGELMDVDL-GEKFNINKEAYLKMIY-NKTAVLIEASARCGAILA--GLYEKD-FAEYGK 179
Query: 204 CIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
+GL FQ++DDILD+ K LGK A D K T P + EN ++
Sbjct: 180 NLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQE 227
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 234 (87.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 72/235 (30%), Positives = 114/235 (48%)
Query: 22 AKIHEAMRYSLLAGGKRVRPV---LCIASCELVGGD----ESSAMPVACALEMIHTMSLV 74
+++ E Y GK RP+ L +C + + ++S +A EMIHT SLV
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDD+ +D+ RRGK T +K++GE A+LAGD +LS A +A I V+ +
Sbjct: 179 HDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA----RIGNTTVISILT 232
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNM 192
++ E LV GE + + S+ + + LE KTA L+ + +
Sbjct: 233 QV-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDP 286
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+ E +Y + +G+ FQ++DD+LD T S ++GK DL AT P L +
Sbjct: 287 VVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 341
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 79/282 (28%), Positives = 127/282 (45%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
V + E++ L + + + + +GGKR+RP++ + E+ G S ++ A A+EM
Sbjct: 22 VEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEM 81
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALL--SLAFEHVAAKSTEIS 125
+H+ SL+HDDL +D RR P+ + FG A+L GD L+ S+AF IS
Sbjct: 82 MHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIAF---------IS 130
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXX 185
P + I + G A G + + GE++D+ E + N+ KTA L +
Sbjct: 131 PYGE-KVIQDFGKA-GMD-MAEGEVLDLKLEDESFGENDYFKCIYKKTASLFAISASIGA 187
Query: 186 XXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
ER + +G +Q+VDDIL+ + + GK + + Y K
Sbjct: 188 YTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVVE--GKESKFTSETLPHIYMKSTS 245
Query: 246 IENARKFACDLL----AQATEELAYFEVARAAP-LYHLAYYI 282
E A K + D + A A E L F A L+ + YI
Sbjct: 246 KEEALKKSIDCVKLHVAAAKETLETFRECPARDKLFQITDYI 287
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 229 (85.7 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 74/231 (32%), Positives = 113/231 (48%)
Query: 22 AKIHEAMRYSLLAGGKRVRP---VLCIASCELVGGD----ESSAMPVACALEMIHTMSLV 74
A++ E Y GK RP VL +C + + ++S VA EMIHT SLV
Sbjct: 70 AELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLV 129
Query: 75 HDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIA 134
HDD+ +D+ + RRGK T ++++GE A+LAGD +LS A +A I ++ +
Sbjct: 130 HDDV--IDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLALA----RIGNTTIISVLT 183
Query: 135 ELGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNM 192
++ E LV GE + + S+ + + LE KTA L+ + +
Sbjct: 184 QV-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSILGCPDP 237
Query: 193 IEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKL 243
E +Y + +G+ FQ++DD+LD T + LGK A DL AT P L
Sbjct: 238 KVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVL 288
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 231 (86.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 71/234 (30%), Positives = 113/234 (48%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIA---SCELVGGD----ESSAMPVACALEMIHTMSLVH 75
++ E Y GK RP++ + +C + + ++S +A EMIHT SLVH
Sbjct: 115 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVH 174
Query: 76 DDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAE 135
DD+ +D+ RRGK T +K++GE A+LAGD +LS A +A I V+ + +
Sbjct: 175 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA----RIGNTTVISILTQ 228
Query: 136 LGSAVGSEGLVAGEIMDIDSEGKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNMI 193
+ E LV GE + + S+ + + LE KTA L+ + +
Sbjct: 229 V-----IEDLVRGEFLQLGSKENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDPA 282
Query: 194 EVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
E +Y + +G+ FQ++DD+LD T S ++GK DL AT P L +
Sbjct: 283 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 336
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 204 (76.9 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 73/202 (36%), Positives = 98/202 (48%)
Query: 53 GDES---SAMPVACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDAL 109
GDE+ S +A E+IHT SL+HDD+ +DN RR + + FG A+LAGD L
Sbjct: 188 GDENILPSQRRLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFL 245
Query: 110 LSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD----VSLNEL 165
L A VA P+ + EL + V + LV GE M + + +D V ++
Sbjct: 246 LGRA--SVALARLR-DPE-----VTELLATVIAN-LVEGEFMQLKNTAEDEKNPVFTDDT 296
Query: 166 ENIHLHKT----AKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKS 221
+ +L KT A L+ + VE Y R +GL FQ+VDD+LD T S
Sbjct: 297 ISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVS 356
Query: 222 SKELGKTAGKDLVSDKATYPKL 243
ELGK AG DL AT P L
Sbjct: 357 GVELGKPAGADLELGLATAPLL 378
Score = 42 (19.8 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 6 KRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI 45
K + K + + + HP + + +Y + GK +RP+L +
Sbjct: 89 KFLTKNIRQLLGSGHPT-LDKVAKYYTRSEGKHMRPLLVL 127
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 224 (83.9 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 74/254 (29%), Positives = 121/254 (47%)
Query: 36 GKRVRPVLCIASCELVG---GDESSAM-----PVACALEMIHTMSLVHDDLPCMDNDDFR 87
GK +RP++ + + + +ES + +A EM+H+ SLVHDD+ +D DFR
Sbjct: 153 GKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDV--IDQSDFR 210
Query: 88 RGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVA 147
RGKP+ + ++ +AGD +LS+A +A + D V ++++ + LV
Sbjct: 211 RGKPSVNALWNHKKVTMAGDYILSIASIMIA----RLRSDDVTIVLSQILT-----DLVQ 261
Query: 148 GEIMDIDS-EGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIG 206
GE M + S E ++ KTA L+ A + E +Y R IG
Sbjct: 262 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 321
Query: 207 LLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDLLAQATEELAY 266
L FQ+VDD+LD S++++GK DL AT P L E + ++ + +E
Sbjct: 322 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEP--- 378
Query: 267 FEVARAAPLYHLAY 280
+V RA L H ++
Sbjct: 379 GDVERAFELVHKSH 392
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 224 (83.9 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 84/257 (32%), Positives = 119/257 (46%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRP-VLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDL 78
HP + Y GKR+RP ++ + S L S + +A +EMIHT SLVHDD+
Sbjct: 167 HPI-LSSISSYYFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDV 225
Query: 79 PCMDNDDFRRGKPT-NHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELG 137
+D RR + NH + AIL GD LL+ A ST +PD + E
Sbjct: 226 --IDEASTRRDVISINHS-YTNKLAILCGDYLLARAS---VVLSTIRNPD-----VTECM 274
Query: 138 SAVGSEGLVAGEIMDIDSEGKDVSL-NELENIHLHKTAKLL--EAAXXXXXXXXXXNMIE 194
S +E LV GE M S G VS N L+ +L KT L+ N+I
Sbjct: 275 STALAE-LVEGEFMQAKSNGV-VSFDNYLQKTYL-KTGSLITNSCRSAAILSGADSNIIN 331
Query: 195 VERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC 254
+ ++ + +GL FQ+VDD+LD T S++E GK DL AT P L + +
Sbjct: 332 IST--EFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLE- 388
Query: 255 DLLAQATEELAYFEVAR 271
L+ + E+ E A+
Sbjct: 389 KLIKRKFSEIGDVEEAK 405
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 216 (81.1 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 68/189 (35%), Positives = 97/189 (51%)
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAA- 119
+A EMIH SL+HDD+ +D+ D RRG + + V G ++LAGD LLS A +AA
Sbjct: 166 IAEITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAAL 223
Query: 120 KSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKD-VSLNELENIHLHKTAKLLE 178
K+TE+ +A L +AV E LV GE M+I S + S++ +KTA L+
Sbjct: 224 KNTEV--------VALLATAV--EHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLIS 273
Query: 179 AAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKA 238
+ +Y R +GL FQ++DDILD T +S LGK + D+
Sbjct: 274 NSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVI 333
Query: 239 TYPKLMGIE 247
T P L +E
Sbjct: 334 TAPILFAME 342
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 142 (55.0 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 42/116 (36%), Positives = 62/116 (53%)
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDD+ +D+ D RRG+P+ + F A+LAGD LL A ++
Sbjct: 182 VEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISRLH--- 236
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIH--LHKTAKLLE 178
+P+ + EL S LV GE M + + D ++ +EN H L +K LE
Sbjct: 237 NPE-----VVELMSN-SIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLE 286
Score = 112 (44.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 172 KTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGK 231
KTA L+ + + ++ + R +G+ FQ+VDD+LD T S K+LGK +G
Sbjct: 323 KTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGA 382
Query: 232 DLVSDKATYPKL 243
DL AT P L
Sbjct: 383 DLKLGIATAPVL 394
Score = 43 (20.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 20 HPAKIHEAMRYSLLAGGKRVRPVLCI 45
HP +++ Y GK+VRP+L +
Sbjct: 68 HPV-LNKVTSYYFETEGKKVRPLLVL 92
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 130 (50.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHLHKT----AKLLEAAXXXXXXXXXXNMIEVE 196
G+ G A + +D E +++ +LHKT A L+ + +E
Sbjct: 329 GNGGDSADAAVVVDHE---INVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIE 385
Query: 197 RVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFACDL 256
++ R +GL FQ+VDD+LD T S K +GK + DL AT P L + K DL
Sbjct: 386 NCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLG-DL 444
Query: 257 LAQATEELAYFEVARAA 273
+A+ + E+AR A
Sbjct: 445 IARKFNQPGDVEIARRA 461
Score = 119 (46.9 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 65 LEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEI 124
+EMIHT SL+HDD+ +D D RRG+P+ + F A+LAGD LL A S I
Sbjct: 204 VEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRA-------SVAI 254
Query: 125 SPDRVVRAIAELGSAVGSEGLVAGEIMDI 153
+ R I L + + + LV GE M +
Sbjct: 255 ARLRNPEVIELLSTTIAN--LVEGEFMQL 281
Score = 44 (20.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 10 KALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI 45
K++ + HP ++ Y A GK VRP++ +
Sbjct: 63 KSIANLIGSGHPT-LNRVSSYYFEAEGKNVRPLIVL 97
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 194 (73.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 56/188 (29%), Positives = 93/188 (49%)
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
EMIHT SLVHDD+ +D + RRG + + V+G ++L GD +L+ A + + + I
Sbjct: 143 EMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS----IG 196
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNE-----LENIHLHKTAKLLEAA 180
++ +A + E LV GE M + + D + + +E H KTA L ++
Sbjct: 197 KPNIISVMASI-----IEDLVLGEFMQMSTTPTDATPVDRMKAYIEKTH-RKTASLFASS 250
Query: 181 XXXXXXXXXXNMIEVERVR-KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKAT 239
+ +++ + +Y R +G+ FQ+ DD+LD ++ E+GK DL AT
Sbjct: 251 CRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLAT 310
Query: 240 YPKLMGIE 247
P L E
Sbjct: 311 APVLYACE 318
Score = 38 (18.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 11 ALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI 45
A++ L + + Y GGK +RP + +
Sbjct: 62 AVENLADLNVTSNLGRMTHYYFQQGGKMLRPTVSL 96
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 97 FGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSE 156
+GE A+LAGD +LS A +A I V+ + ++ E LV GE + + S+
Sbjct: 2 WGEKKAVLAGDLILSAASIALA----RIGNTTVISILTQV-----IEDLVRGEFLQLGSK 52
Query: 157 GKDVS--LNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDD 214
+ + LE KTA L+ + + + E +Y + +G+ FQ++DD
Sbjct: 53 ENENERFAHYLEKT-FKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDD 111
Query: 215 ILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+LD T S ++GK DL AT P L +
Sbjct: 112 VLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 144
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 143 (55.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 56/187 (29%), Positives = 84/187 (44%)
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ A E+IH SL+HDD+ +D+ + RRG HK FG +IL+GD LL+ A A
Sbjct: 269 IIAASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGT 326
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHL----HKTAKL 176
SP ++ R+ + + E L+ GE + + + +V E ++L HKTA L
Sbjct: 327 G---SP-KICRSFSYV-----VESLIKGEFLQRNLKFNNVE--EALKMYLIKSYHKTASL 375
Query: 177 LEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
N ++ IG+ FQ+ DD LD K K DL ++
Sbjct: 376 FSHLFACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNN 434
Query: 237 KATYPKL 243
T P L
Sbjct: 435 IKTAPLL 441
Score = 47 (21.6 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI 45
SK K +++ + ++ + I E + Y L GKR R +L I
Sbjct: 160 SKIKNIDEYIYNIIKTNYK-NIDEFITYIYLYKGKRFRVILSI 201
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 143 (55.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 56/187 (29%), Positives = 84/187 (44%)
Query: 61 VACALEMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAK 120
+ A E+IH SL+HDD+ +D+ + RRG HK FG +IL+GD LL+ A A
Sbjct: 269 IIAASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGT 326
Query: 121 STEISPDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHL----HKTAKL 176
SP ++ R+ + + E L+ GE + + + +V E ++L HKTA L
Sbjct: 327 G---SP-KICRSFSYV-----VESLIKGEFLQRNLKFNNVE--EALKMYLIKSYHKTASL 375
Query: 177 LEAAXXXXXXXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSD 236
N ++ IG+ FQ+ DD LD K K DL ++
Sbjct: 376 FSHLFACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNN 434
Query: 237 KATYPKL 243
T P L
Sbjct: 435 IKTAPLL 441
Score = 47 (21.6 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 3 SKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCI 45
SK K +++ + ++ + I E + Y L GKR R +L I
Sbjct: 160 SKIKNIDEYIYNIIKTNYK-NIDEFITYIYLYKGKRFRVILSI 201
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 61/261 (23%), Positives = 102/261 (39%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCE--LVGGDESSAMPVACAL 65
+ K D++ Q + + Y GK+ R L +A L+ G++ + + +
Sbjct: 8 LQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ--IGDIV 65
Query: 66 EMIHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEIS 125
+M+H SL+ DD+ DN RRG P H ++G + I A + L LA E V +
Sbjct: 66 QMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEA 123
Query: 126 PDRVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXX 185
+ EL G E + + SE D L + + KT L A
Sbjct: 124 TKVYTEQLLELHRGQGME-IYWRDSFTCPSES-DYKL-----MTVRKTGGLFMLAIRLMQ 176
Query: 186 XXXXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMG 245
E K +GL FQ+ DD +++ K+ +DL K +P +
Sbjct: 177 LFSSNK----EDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHA 232
Query: 246 IENAR--KFACDLLAQATEEL 264
+ + K +L Q T ++
Sbjct: 233 VRTQKQDKQVLHILRQRTHDI 253
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 130 (50.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 61/241 (25%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 128 (50.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 57/221 (25%), Positives = 87/221 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
GL FQ+ DD ++ K+ +DL K ++P + I
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 130 (50.8 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 61/241 (25%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 130 (50.8 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 61/241 (25%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>WB|WBGene00011058 [details] [associations]
symbol:fdps-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0000003
eggNOG:COG0142 GO:GO:0008299 HOGENOM:HOG000160912 KO:K00787
GeneTree:ENSGT00530000064127 HSSP:P08836 OMA:DIQENKC EMBL:Z81106
PIR:D87933 PIR:T23962 RefSeq:NP_493027.1 ProteinModelPortal:O62336
SMR:O62336 STRING:O62336 PaxDb:O62336 EnsemblMetazoa:R06C1.2
GeneID:173075 KEGG:cel:CELE_R06C1.2 UCSC:R06C1.2 CTD:173075
WormBase:R06C1.2 InParanoid:O62336 NextBio:878175 Uniprot:O62336
Length = 352
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 60/229 (26%), Positives = 96/229 (41%)
Query: 35 GGKRVRPVLCIASCELVGG---DESSAMPVAC----ALEMIHTMSLVHDDLPCMDNDDFR 87
GGK R LC+ + + DE+ + C LE+I + L+ DD+ MDN + R
Sbjct: 51 GGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI--MDNSETR 108
Query: 88 RGKPTNHKVFGEDTAILAGDALLSLAF-EHVA--AKSTEISPDRVVRAIAELGSAVGSEG 144
RGKP + G + + DA + +F E + A ++ DR+ A + +
Sbjct: 109 RGKPCWFRREGVGMSAI-NDAFIMDSFVEDILRLALPGHVNLDRLCEAYRK-----SKQK 162
Query: 145 LVAGEIMDIDSEGKDVSL--NELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYA 202
+ G+ +D S + S + E + +KT+ + V+K A
Sbjct: 163 TLIGQFLDTSSVNQISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVLAYHGSVKKVA 222
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARK 251
IG LFQ DD LDV K GK G D+ K T+ + ++ K
Sbjct: 223 YQIGFLFQSQDDFLDVYGDPKITGKI-GTDIQDGKCTWLAVRALQKMHK 270
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 129 (50.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 61/247 (24%), Positives = 98/247 (39%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
+I E +Y L GK+VR L A + E + EM+H SL+ DD+ D
Sbjct: 6 RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--D 63
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRV---VRAIAELGSA 139
N RRG P H ++G + I + + L E V T PD V R + EL
Sbjct: 64 NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVL---TLDHPDAVKVFTRQLLELHKG 120
Query: 140 VGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVR 199
G + + + +E E + + L KT L A + ++
Sbjct: 121 QGLD-IYWRDTYTCPTEA------EYKAMVLQKTGGLFGLAVGLMQLFSNYK----KDLK 169
Query: 200 KYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLL 257
+GL FQ+ DD ++ K+ +DL K ++P + I + + ++L
Sbjct: 170 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSKPESTQVQNIL 229
Query: 258 AQATEEL 264
Q TE +
Sbjct: 230 RQRTENI 236
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 128 (50.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 60/241 (24%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V + PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLN---HPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLDTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 130 (50.8 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 66/250 (26%), Positives = 106/250 (42%)
Query: 30 YSLLAGGKRVRPVLCIA-SCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDDFRR 88
Y L GK +R + A + L ES A+ + + M+HT SL+ DD+ DN RR
Sbjct: 89 YMLQHPGKDLRRQMINAFNVWLKVPSESLAI-ITKVVAMLHTASLLIDDVE--DNSLLRR 145
Query: 89 GKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGLVAG 148
G P H ++G I + + + LA + V + + D V+ + L G + L
Sbjct: 146 GIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQGMD-LFWR 204
Query: 149 EIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCIGLL 208
+ + SE D L + N KT L A V V +GL+
Sbjct: 205 DTLTCPSE--DEYLEMVGN----KTGGLFRLAVKLMQAESSTGKDCVALVN----VLGLV 254
Query: 209 FQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIEN--ARKFACDLLAQATEELAY 266
FQ+ DD L+++ ++ K +DL K ++P + I + ++L Q T++
Sbjct: 255 FQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIRSNPGNHQLINILRQRTKDE-- 312
Query: 267 FEVARAAPLY 276
EV R A Y
Sbjct: 313 -EVKRYALQY 321
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 127 (49.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 61/241 (25%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E RY L GK+VR L A + E + EM+H SL+ DD+ D+
Sbjct: 14 EPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGVPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDTYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLDTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/241 (24%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L + V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGIPSVINSANYVYFLGLQKVL---TLDHPDAVKLFTHQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDNYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 104 (41.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 8 VNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+ + +DE + + E +Y L GK+VR L A + E + EM
Sbjct: 38 IYRGMDEKQRATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEM 97
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHV 117
+H SL+ DD+ D+ RRG P H ++G + I + + + L E V
Sbjct: 98 LHNASLLIDDIE--DSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKV 145
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 205 IGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATE 262
+GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 222 LGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAIWSHPESTQVQNILRQRTE 281
Query: 263 EL 264
L
Sbjct: 282 NL 283
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 60/241 (24%), Positives = 96/241 (39%)
Query: 26 EAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDNDD 85
E +Y L GK+VR L A + E + EM+H SL+ DD+ D+
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSK 71
Query: 86 FRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGSEGL 145
RRG P H ++G + I + + + L E V T PD V +L +GL
Sbjct: 72 LRRGFPVAHSIYGVPSVINSANYVYFLGLEKVL---TLDHPDAVKLFTRQLLELHQGQGL 128
Query: 146 VAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYARCI 205
+I D+ E + + L KT L A E ++ +
Sbjct: 129 ---DIYWRDTYTCPTE-EEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLDTL 180
Query: 206 GLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIENARKFAC--DLLAQATEE 263
GL FQ+ DD ++ K+ +DL K ++P + I + + ++L Q TE
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN 240
Query: 264 L 264
+
Sbjct: 241 I 241
>ASPGD|ASPL0000044272 [details] [associations]
symbol:AN1592 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0019748 "secondary
metabolic process" evidence=IEP;IGC] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001307
EMBL:AACD01000025 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 OrthoDB:EOG4QVGMM
RefSeq:XP_659196.1 ProteinModelPortal:Q5BCY8
EnsemblFungi:CADANIAT00008225 GeneID:2875291 KEGG:ani:AN1592.2
OMA:CAAIANE Uniprot:Q5BCY8
Length = 397
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/250 (24%), Positives = 103/250 (41%)
Query: 12 LDETVQLRHPAKIHEAMR--YSLLAG--GKRVRPVLCIASCELVGGDESSAMPVACALEM 67
+DE + + A +R Y +AG GK +R L A DE S +A + M
Sbjct: 91 IDEKLSMYWKAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQSCQAIATTVGM 150
Query: 68 IHTMSLVHDDLPCMDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPD 127
H SL+ DD+ D+ RRG P H+VFG I + + + LA + + P
Sbjct: 151 AHNASLLIDDI--QDSSKLRRGVPCAHEVFGIAQTINSANYVYFLAQNQLFRLRSW--PQ 206
Query: 128 RVVRAIAELGSAVGSEGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXX 187
+ E+ + +G+ E+ D+ S+++ + +KT L
Sbjct: 207 AISVFNEEMVNLHRGQGM---ELFWRDNL-LPPSMDDYLQMIANKTGGLFRMIVRLLQTS 262
Query: 188 XXXNMIEVERVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE 247
+I+VE++ +GL FQ++DD ++ + K +DL K ++P I
Sbjct: 263 SR-QVIDVEQL---VDVLGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPICHAIG 318
Query: 248 NARKFACDLL 257
K LL
Sbjct: 319 EGAKNRTALL 328
>DICTYBASE|DDB_G0293588 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase 1"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISS] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA;ISS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 dictyBase:DDB_G0293588 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AAFI02000218 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K00804
OMA:MLAIRLM RefSeq:XP_629028.1 HSSP:O95749
ProteinModelPortal:Q54BK1 SMR:Q54BK1 STRING:Q54BK1
EnsemblProtists:DDB0233098 GeneID:8629314 KEGG:ddi:DDB_G0293588
ProtClustDB:CLSZ2429239 Uniprot:Q54BK1
Length = 303
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 61/255 (23%), Positives = 104/255 (40%)
Query: 23 KIHEAMRYSLLAGGKRVRPVLCIASCE--LVGGDESSAMPVACALEMIHTMSLVHDDLPC 80
K+ E Y + GK R L I S + L GDE ++ ++ +H SL+ DD+
Sbjct: 18 KLIEPYTYICESSGKGFRNAL-IKSFDYWLKVGDEK-VQDISKVIQGLHGASLLIDDIE- 74
Query: 81 MDNDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAV 140
DN RRGKP H ++G I + + + L + P I EL
Sbjct: 75 -DNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQCNKLG---DPKATTIFIEELIR-- 128
Query: 141 GSEGLVAGEIMDIDSEGKDVSLNELENIHL--HKTAKLLEAAXXXXXXXXXXNMIEVERV 198
L G+ DI + S +E E +++ KT L N ++ V
Sbjct: 129 ----LHRGQGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTNYIDLV 184
Query: 199 RKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGIE---NARKFACD 255
+G+ +Q+ DD++++ + K+ +D+ K ++P + I N +
Sbjct: 185 ED----LGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHAINADSNDNRLL-R 239
Query: 256 LLAQATEELAYFEVA 270
+L Q TE+ + E A
Sbjct: 240 ILKQKTEDRSVKEHA 254
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 54/224 (24%), Positives = 96/224 (42%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCEL-VGGDESSAMPVACALEMIHTMSLVHDDLPCMD 82
I E Y + GK +R L I++ +L + + + + M+H SL+ DD+ D
Sbjct: 17 ILEPYTYLISQPGKDIRAKL-ISAFDLWLHVPKDVLCVINKIIGMLHNASLMIDDV--QD 73
Query: 83 NDDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTEISPDRVVRAIAELGSAVGS 142
+ D RRG P H ++G I + ++ LA + V + P + EL +
Sbjct: 74 DSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNI---PSMMQVCTEELINLHRG 130
Query: 143 EGLVAGEIMDIDSEGKDVSLNELENIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRKYA 202
+G+ E+ DS ++ ++ +KT+ LL A ++ V
Sbjct: 131 QGI---ELYWRDSLTCPTEEEYIDMVN-NKTSGLLRLAVRLMQAASESDIDYTPLVN--- 183
Query: 203 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYPKLMGI 246
IG+ FQV DD +++ +S K +DL K ++P + I
Sbjct: 184 -IIGIHFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPIIHAI 226
>SGD|S000005990 [details] [associations]
symbol:BTS1 "Geranylgeranyl diphosphate synthase"
species:4932 "Saccharomyces cerevisiae" [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0016117
"carotenoid biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISS;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=IGI;IMP;IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 SGD:S000005990
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0015031 EMBL:BK006949 GO:GO:0016114 EMBL:U39205
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4QVGMM
EMBL:U31632 EMBL:AY692852 PIR:S60921 RefSeq:NP_015256.1 PDB:2DH4
PDB:2E8T PDB:2E8U PDB:2E8V PDB:2E8W PDB:2E8X PDB:2E90 PDB:2E91
PDB:2E92 PDB:2E93 PDB:2E94 PDB:2E95 PDB:2Z4V PDB:2Z4W PDB:2Z4X
PDB:2Z4Y PDB:2Z4Z PDB:2Z50 PDB:2Z52 PDB:2Z78 PDB:2Z7H PDB:2Z7I
PDB:2ZEU PDB:2ZEV PDBsum:2DH4 PDBsum:2E8T PDBsum:2E8U PDBsum:2E8V
PDBsum:2E8W PDBsum:2E8X PDBsum:2E90 PDBsum:2E91 PDBsum:2E92
PDBsum:2E93 PDBsum:2E94 PDBsum:2E95 PDBsum:2Z4V PDBsum:2Z4W
PDBsum:2Z4X PDBsum:2Z4Y PDBsum:2Z4Z PDBsum:2Z50 PDBsum:2Z52
PDBsum:2Z78 PDBsum:2Z7H PDBsum:2Z7I PDBsum:2ZEU PDBsum:2ZEV
ProteinModelPortal:Q12051 SMR:Q12051 IntAct:Q12051 STRING:Q12051
PaxDb:Q12051 EnsemblFungi:YPL069C GeneID:856036 KEGG:sce:YPL069C
CYGD:YPL069c BioCyc:MetaCyc:MONOMER-13701 SABIO-RK:Q12051
ChEMBL:CHEMBL1075251 EvolutionaryTrace:Q12051 NextBio:980968
Genevestigator:Q12051 GermOnline:YPL069C Uniprot:Q12051
Length = 335
Score = 111 (44.1 bits), Expect = 0.00089, P = 0.00089
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 24 IHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPVACALEMIHTMSLVHDDLPCMDN 83
I + + LL GK R L + ++ + V+ +E++H SL+ DD+ DN
Sbjct: 23 ISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DN 80
Query: 84 DDFRRGKPTNHKVFGEDTAILAGDALLSLAFEHVAAKSTE--ISPDRVVRAIAELGSAVG 141
RRG+ T+H +FG + I + + A + V+ +T+ + + + EL +
Sbjct: 81 APLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYHNLITIFNEELINLHR 140
Query: 142 SEGLVAGEIMDIDSEGKDVSLNELE-NIHLHKTAKLLEAAXXXXXXXXXXNMIEVERVRK 200
+GL +I D + + E+ N+ ++KT L + V
Sbjct: 141 GQGL---DIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHHGHSLV-P 196
Query: 201 YARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVSDKATYP 241
+ +G+++Q+ DD L++ K +D+ K ++P
Sbjct: 197 FINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFP 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 287 277 0.00080 115 3 11 22 0.49 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 579 (62 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.24u 0.07s 22.31t Elapsed: 00:00:02
Total cpu time: 22.25u 0.08s 22.33t Elapsed: 00:00:02
Start: Sat May 11 05:37:41 2013 End: Sat May 11 05:37:43 2013